Analysis, visualisation and simulation of digital polymerase chain
reaction (dPCR).
binom, chipPCR, e1071, dgof, multcomp, qpcR, pracma,
rateratio.test, readxl, signal, shiny, spatstat
DT, ggplot2, knitr, markdown, shinythemes, xtable
'AUCtest.R' 'White.R' 'adpcr2panel.R' 'adpcr2ppp.R'
'binarize.R' 'classes.R' 'bind_dpcr.R' 'bioamp.R'
'calc_breaks.R' 'calc_coordinates.R' 'calc_lambda.R'
'compare_dens.R' 'count_test-class.R' 'create_dpcr.R'
'dPCRmethyl.R' 'dpcR-package.R' 'dpcReport_gui.R'
'dpcr_calculator.R' 'dpcr_density.R' 'dpcr_density_gui.R'
'dpcr_density_table.R' 'extract_dpcr.R' 'fit_adpcr.R' 'fl.R'
'get_k_n.R' 'limit_cq.R' 'many_peaks.R' 'modlist.R' 'moments.R'
'num2int.R' 'pds.R' 'pds_raw.R' 'plot_distr.R' 'plot_panel.R'
'plot_vf_circ.R' 'plot_vic_fam.R' 'print_summary.R' 'qdpcr.R'
'qpcr2pp.R' 'qpcr_analyser.R' 'read_dpcr.R' 'rename_dpcr.R'
'rtadpcr.R' 'safe_efficiency.R' 'show_dpcr.R' 'sim_adpcr.R'
'sim_ddpcr.R' 'sim_ddpcr_bkm.R' 'simulations.R' 'six_panels.R'
'summary_dpcr.R' 'test_counts.R' 'test_counts_gui.R'
'test_panel.R' 'test_peaks.R' 'test_ratio.R' 'valid_amp.R'
'y_val_conf.R'

DT, ggplot2, knitr, markdown, rmarkdown, shinythemes, xtable
'AUCtest.R' 'BioradCNV.R' 'White.R' 'adpcr2panel.R'
'adpcr2ppp.R' 'analyze_pooled.R' 'binarize.R' 'classes.R'
'bind_dpcr.R' 'bioamp.R' 'calc_breaks.R' 'calc_coordinates.R'
'calc_lambda.R' 'compare_dens.R' 'count_test-class.R'
'create_dpcr.R' 'dPCRmethyl.R' 'dpcR-package.R'
'dpcReport_gui.R' 'dpcr_calculator.R' 'dpcr_density.R'
'dpcr_density_gui.R' 'dpcr_density_table.R' 'extract_dpcr.R'
'fit_adpcr.R' 'fl.R' 'get_k_n.R' 'limit_cq.R' 'many_peaks.R'
'modlist.R' 'moments.R' 'num2int.R' 'pds.R' 'pds_raw.R'
'plot_distr.R' 'plot_panel.R' 'plot_vf_circ.R' 'plot_vic_fam.R'
'print_summary.R' 'qdpcr.R' 'qpcr2pp.R' 'qpcr_analyser.R'
'read_dpcr.R' 'rename_dpcr.R' 'rtadpcr.R' 'safe_efficiency.R'
'show_dpcr.R' 'sim_adpcr.R' 'sim_ddpcr.R' 'sim_ddpcr_bkm.R'
'simulations.R' 'six_panels.R' 'summary_dpcr.R' 'test_counts.R'
'test_counts_gui.R' 'test_panel.R' 'test_peaks.R'
'test_ratio.R' 'valid_amp.R' 'y_val_conf.R'