c(person("Alberto", "Garre", email = "garre.alberto@gmail.com", role = c("aut", "cre")),
person("Jose Lucas", "Penalver-Soto", email = "", role = "aut"),
person("Pablo S.", "Fernandez", email = "pablo.fernandez@upct.es", role = "aut"),
person("Jose A.", "Egea", email = "josea.egea@upct.es", role = "aut")
)
Alberto Garre [aut, cre],
Jose Lucas Penalver-Soto [aut],
Pablo S. Fernandez [aut],
Jose A. Egea [aut]

Simulation of deterministic and stochastic biochemical reaction
networks using Petri Nets
bioPN is a package suited to perform simulation of deterministic and stochastic systems of biochemical reaction
networks.
Models are defined using a subset of Petri Nets, in a way that is close at how chemical reactions
are defined.
For deterministic solutions, bioPN creates the associated system of differential equations "on the fly", and
solves it with a Runge Kutta Dormand Prince 45 explicit algorithm.
For stochastic solutions, bioPN offers variants of Gillespie algorithm, or SSA.
For hybrid deterministic/stochastic,
it employs the Haseltine and Rawlings algorithm, that partitions the system in fast and slow reactions.
bioPN algorithms are developed in C to achieve adequate performance.

Biological Analysis and Visualization of Weather Radar Data
Extract, visualize and summarize aerial movements of birds and
insects from weather radar data.
c(
person("Adriaan M.", "Dokter", role = c("aut", "cre"), email = "amd427@cornell.edu", comment = c(ORCID = "0000-0001-6573-066X")),
person("Peter", "Desmet", role = "aut", email = "peter.desmet@inbo.be", comment = c(ORCID = "0000-0002-8442-8025")),
person("Stijn", "Van Hoey", role = "aut", email = "stijn.vanhoey@inbo.be", comment = c(ORCID = "0000-0001-6413-3185")),
person("Jurriaan", "Spaaks", role = "ctb", email = "j.spaaks@esciencecenter.nl"),
person("Lourens", "Veen", role = "ctb", email = "l.veen@esciencecenter.nl"),
person("Liesbeth", "Verlinden", role = "ctb", email = "l.verlinden@uva.nl", comment = c(ORCID = "0000-0003-1744-9325")),
person("Hidde", "Leijnse", role = "ctb", email = "hidde.leijnse@knmi.nl", comment = c(ORCID = "0000-0001-7835-4480"))
)
curl, fields, ggmap, ggplot2, graphics, methods, raster,
rgdal, rhdf5, sp, stats, utils, maptools
Adriaan M. Dokter [aut, cre] (<https://orcid.org/0000-0001-6573-066X>),
Peter Desmet [aut] (<https://orcid.org/0000-0002-8442-8025>),
Stijn Van Hoey [aut] (<https://orcid.org/0000-0001-6413-3185>),
Jurriaan Spaaks [ctb],
Lourens Veen [ctb],
Liesbeth Verlinden [ctb] (<https://orcid.org/0000-0003-1744-9325>),
Hidde Leijnse [ctb] (<https://orcid.org/0000-0001-7835-4480>)