c(
person(given = "Matt",
family = "Wheeler",
role = c("aut", "cre"),
email = "matt.wheeler@nih.gov",
comment = c(ORCID = "0000-0002-8242-2391")),
person(given = "Sooyeong",
family = "Lim",
role = "aut"),
person(given ="Eric",
family="Wimberly",
role = "ctb"),
person(given = "Keith",
family = "Shockley",
role = "com"),
person(given = "Jennifer",
family = "Fostel",
role = "com"),
person(given="Lonlong",
family="Yang",
role="ctb",
comment="Modfied Cochran-Armitage test."),
person(given = "Dawan",
family = "Taley",
role = "com"),
person(given = "Cari",
family = "Martini",
role   = "com"),
person(given = "Ashwin",
family = "Raghuraman",
role   = "ctb",
comment = "Modified code for (Jonckheere, Williams etc.) to make them  standalone functions."),
person(given = "Steven",
family = "Johnson",
role = "ctb",
comment ="Author of NLOPT."),
person(given = "Aymeric",
family = "Stamm",
role = "ctb",
comment ="Maintainer of nloptr Packag 2.0.1 from which all compile scripts were taken."),
person("U.S. Deptartment of Health and Human Services",
role="cph",
comment ="Owns Copyright for all ToxicR code outside NLOPT and nloptr scripts.")
)
Matt Wheeler [aut, cre] (<https://orcid.org/0000-0002-8242-2391>),
Sooyeong Lim [aut],
Eric Wimberly [ctb],
Keith Shockley [com],
Jennifer Fostel [com],
Lonlong Yang [ctb] (Modfied Cochran-Armitage test.),
Dawan Taley [com],
Cari Martini [com],
Ashwin Raghuraman [ctb] (Modified code for (Jonckheere, Williams etc.)
to make them standalone functions.),
Steven Johnson [ctb] (Author of NLOPT.),
Aymeric Stamm [ctb] (Maintainer of nloptr Packag 2.0.1 from which all
compile scripts were taken.),
U.S. Deptartment of Health and Human Services [cph] (Owns Copyright for
all ToxicR code outside NLOPT and nloptr scripts.)

Analysis of Large-Scale Toxico-Genomic Data
c(
person("Sisira","Nair", email = "sisira.nair@uhnresearch.ca",
role = c("aut")),
person("Esther","Yoo", email = "yk.yoo@mail.utoronto.ca",
role = c("aut")),
person("Christopher","Eeles", email = "christopher.eeles@uhnresearch.ca",
role = c("aut")),
person("Amy", "Tang", email = "amy.tang@queensu.ca",
role = c("aut")),
person("Nehme", "El-Hachem1", email = "hachemn@gmail.com",
role = c("aut")),
person("Petr","Smirnov", email = "petr.smirnov@uhnresearch.ca",
role = c("aut")),
person("Benjamin","Haibe-Kains", email = "benjamin.haibe.kains@utoronto.ca",
role = c("aut","cre"))
)
Contains a set of functions to perform large-scale analysis of
toxicogenomic data. A member of the Benjamin Haibe-Kains (BHK) lab's genomics
(Gx) suite of software, this package provides a standardized data structure to
hold information relevant to annotation, visualization and statistical
analysis of toxico-genomic data. This package is in early release, and more
features will be added over the next few months. For more information please
see the included documentation, vignette, as well as:
Ruede-Zarate, H.A. et al (2017) <doi:10.1371/journal.pone.0176284>,
Caiment, F. et al (2014) <doi:10.1093/carcin/bgt278>.
SummarizedExperiment, Biobase, RColorBrewer, caTools,
magicaxis, methods, reshape2, scales
testthat (>= 2.1.0), rmarkdown, knitr, knitcitations,
tinytex, devtools, PharmacoGx, xtable
Sisira Nair [aut],
Esther Yoo [aut],
Christopher Eeles [aut],
Amy Tang [aut],
Nehme El-Hachem1 [aut],
Petr Smirnov [aut],
Benjamin Haibe-Kains [aut, cre]