Christian Panse <cp@fgcz.ethz.ch>, Jonas Grossmann
<jg@fgcz.ethz.ch>, Simon Barkow-Oesterreicher <sb@fgcz.ethz.ch>
parentIonMass.R fragmentIons.R psm.R findNN.R peakplot.R
iTRAQ2GroupAnalysis.R pgImporter.R pgLFQ.R pp.R genMod.R
swath.R PTM_MarkerFinder.R mdp.R lcmsmap.R de_novo.R

Christian Panse <cp@fgcz.ethz.ch>, Jonas Grossmann <jg@fgcz.ethz.ch>, Simon Barkow-Oesterreicher <sb@fgcz.ethz.ch>
This R package helps with quality checks, visualizations
and analysis of mass spectrometry data, coming from proteomics
experiments. The package is developed, tested and used at the Functional
Genomics Center Zurich. We use this package mainly for prototyping,
teaching, and having fun with proteomics data. But it can also be
used to do solid data analysis for small scale data sets.
parentIonMass.R fragmentIons.R psm.R findNN.R findNN_.R
peakplot.R iTRAQ2GroupAnalysis.R pgImporter.R pgLFQ.R pp.R
genMod.R swath.R PTM_MarkerFinder.R mdp.R lcmsmap.R de_novo.R
deisotoper.R

Christian Panse <cp@fgcz.ethz.ch>, Jonas Grossmann <jg@fgcz.ethz.ch>,
Simon Barkow-Oesterreicher <sb@fgcz.ethz.ch>
parentIonMass.R fragmentIon.R psm.R findNN.R findNN_.R
peakplot.R iTRAQ2GroupAnalysis.R pgImporter.R pgLFQ.R pp.R
genMod.R swath.R PTM_MarkerFinder.R mdp.R lcmsmap.R de_novo.R
deisotoper.R

aa2mass.R deisotoper.R de_novo.R findNN_.R findNN.R
fragmentIon.R genMod.R iTRAQ2GroupAnalysis.R lcmsmap.R mdp.R
parentIonMass.R peakplot.R pgImporter.R pgLFQ.R pp.R psm.R
PTM_MarkerFinder.R

This R package helps with quality checks, visualizations
and analysis of mass spectrometry data, coming from proteomics
experiments. The package is developed, tested and used at the Functional
Genomics Center Zurich. We use this package mainly for prototyping,
teaching, and having fun with proteomics data. But it can also be
used to do data analysis for small scale data sets.

Christian Panse <cp@fgcz.ethz.ch>, Jonas Grossmann <jg@fgcz.ethz.ch>, Simon Barkow-Oesterreicher

c(person("Christian", "Panse", email = "cp@fgcz.ethz.ch", role = c("aut", "cre")),
person("Jonas", "Grossmann", email = "jg@fgcz.ethz.ch", role = "aut"),
person("Simon", "Barkow-Oesterreicher", role = "ctb"))
Christian Panse [aut, cre],
Jonas Grossmann [aut],
Simon Barkow-Oesterreicher [ctb]
Helps with quality checks, visualizations
and analysis of mass spectrometry data, coming from proteomics
experiments. The package is developed, tested and used at the Functional
Genomics Center Zurich. We use this package mainly for prototyping,
teaching, and having fun with proteomics data. But it can also be
used to do data analysis for small scale data sets.
aa2mass.R deisotoper.R de_novo.R findNN_.R findNN.R
fragmentIon.R genMod.R iTRAQ2GroupAnalysis.R lcmsmap.R mascot.R
mdp.R parentIonMass.R peakplot.R pgImporter.R pgLFQ.R pp.R
psm.R PTM_MarkerFinder.R ssrc.R zzz.R