Jaroslav Kuchar [aut, cre],
Tomas Kliegr [ctb]

rCMA allows access to the Java version
(CMAEvolutionStrategy) of Niko Hansen.

Wolfgang Konen <wolfgang.konen@fh-koeln.de>, Nikolaus Hansen <hansen .AT. lri.fr>
Tool for providing access to the Java version 'CMAEvolutionStrategy' of
Nikolaus Hansen. 'CMA-ES' is the Covariance Matrix Adaptation Evolution Strategy,
see <https://www.lri.fr/~hansen/cmaes_inmatlab.html#java>.

Tool for providing access to the Java version 'CMAEvolutionStrategy' of
Nikolaus Hansen. 'CMA-ES' is the Covariance Matrix Adaptation Evolution Strategy,
see https://www.lri.fr/~hansen/cmaes_inmatlab.html#java.

Detect Copy Number Variants from SNPs Data
c(person(given="Piyal",family="Karunarathne", email="piyalkarumail@yahoo.com", role = c("aut", "cre"),comment = c(ORCID = "0000-0002-1934-145X")),person(given="Pascal", family="Milesi", role = "aut",comment = c(ORCID = "0000-0001-8580-4291")),person(given="Qiujie",family="Zhou", email="qiujie.zhou@ebc.uu.se", role = c("aut"),comment = c(ORCID = "0000-0001-7351-2371")))
Functions in this package will import filtered variant call format (VCF) files of SNPs data and generate data sets to detect copy number variants, visualize them and do downstream analyses with copy number variants(e.g. Environmental association analyses).
data.table, graphics, colorspace, R.utils, qgraph

c(person(given="Piyal",family="Karunarathne", email="piyalkarumail@yahoo.com", role = c("aut", "cre"),comment = c(ORCID = "0000-0002-1934-145X")),person(given="Qiujie",family="Zhou", email="qiujie.zhou@ebc.uu.se", role = c("aut"),comment = c(ORCID = "0000-0001-7351-2371")),person("Klaus", "Schliep", email="klaus.schliep@gmail.com", role = c("aut"), comment = c(ORCID = "0000-0003-2941-0161")),person(given="Pascal", family="Milesi", role = "aut",comment = c(ORCID = "0000-0001-8580-4291")))
data.table, graphics, colorspace, R.utils, qgraph, stringr

Xiang Li, Hong Tian, Kevin Liu, Pilar Lim
Fit a 2-parameter continual reassessment method (CRM) model (O'Quigley and Shen (1996), <doi: 10.2307/2532905>) regularized with L2 norm (Friedman et al. (2010), <doi: 10.18637/jss.v033.i01>) adjusted by the distance with the target dose limiting toxicity (DLT) rate.