Holger Froehlich <h.froehlich@dkfz.de> contributions by Tim Beissbarth <t.beissbarth@dkfz.de>

Computation of functional similarities between GO terms and gene products; GO enrichement analysis
GOstats, cluster (>= 1.11.7), mclust (>= 3.1), annotate, topGO

R (>= 2.6.0), GO.db (>= 2.2.0), AnnotationDbi, annotate, org.Dm.eg.db, org.Hs.eg.db, org.Mm.eg.db, org.Pf.plasmo.db, org.Rn.eg.db, org.Sc.sgd.db, topGO, cluster (>= 1.11.7), mclust (>= 3.1), RBGL, graph
This package implements several functions useful for
computing similarities between GO terms and gene products based on their GO annotation. Moreover it allows for computing a GO enrichment analysis

Holger Froehlich <h.froehlich@dkfz.de>, contributions by Tim Beissbarth <t.beissbarth@dkfz.de>
R (>= 2.6.0), GO.db (>= 2.2.0), AnnotationDbi, annotate, org.Dm.eg.db, org.Hs.eg.db, org.Mm.eg.db, org.Pf.plasmo.db, org.Rn.eg.db, org.Sc.sgd.db, topGO, cluster (>= 1.11.7), mclust (>= 3.1), RBGL, graph, Matrix, corpcor

Computation of functional similarities between GO terms and gene
products; GO enrichement analysis
Holger Froehlich <h.froehlich@gmx.de>, contributions by Tim
Beissbarth <t.beissbarth@dkfz.de>
R (>= 2.7.0), GO.db (>= 2.2.0), AnnotationDbi, annotate,
topGO, cluster (>= 1.11.7), flexmix, RBGL, graph, Matrix,
corpcor, org.Hs.eg.db
This package implements several functions useful for
computing similarities between GO terms and gene products based
on their GO annotation. Moreover it allows for computing a GO
enrichment analysis

Holger Froehlich <frohlich@bit.uni-bonn.de>, contributions by
Tim Beissbarth <t.beissbarth@dkfz.de>

R (>= 2.7.0), GO.db (>= 2.2.0), AnnotationDbi, annotate,
topGO, cluster (>= 1.11.7), flexmix, RBGL, graph, Matrix,
corpcor, org.Hs.eg.db, igraph0

Computation of functional similarities between GO terms and gene
products; GO enrichment analysis
R (>= 2.7.0), GO.db (>= 2.2.0), AnnotationDbi, annotate,
topGO, cluster (>= 1.11.7), flexmix, RBGL, graph, Matrix,
corpcor, org.Hs.eg.db, igraph

R (>= 2.7.0), GO.db (>= 2.2.0), AnnotationDbi, annotate,
topGO, cluster (>= 1.11.7), mclust (>= 3.1), RBGL, graph,
Matrix, corpcor, org.Hs.eg.db