This package provides clustering of genes with similar
dose response (or time course) profiles. It implements the
method described by Lin et al. (2012).

Provides clustering of genes with similar
dose response (or time course) profiles. It implements the method
described by Lin et al. (2012).

Estimate parent distributions with data of several order
statistics
This package uses B-spline based nonparametric smooth
estimators to estimate parent distributions given observations
on multiple order statistics.

Order-restricted Information Criterion-based Clustering
Algorithm
Tianqing Liu, Nan Lin, Ningzhong Shi and Baoxue Zhang
ORIClust is a user-friendly R-based software package for
gene clustering. Clusters are given by genes matched to
prespecified profiles across various ordered treatment groups.
It is particularly useful for analyzing data obtained from
short time-course or dose-response microarray experiments.

Order-Restricted Information Criterion-Based Clustering
Algorithm
A user-friendly R-based software package for
gene clustering. Clusters are given by genes matched to
prespecified profiles across various ordered treatment groups.
It is particularly useful for analyzing data obtained from
short time-course or dose-response microarray experiments.

Functions to handle ordinal relations reflected within the feature space. Those function allow to search for ordinal relations in multi-class datasets. One can check whether proposed relations are reflected in a specific feature representation. Furthermore, it provides functions to filter, organize and further analyze those ordinal relations.
e1071,TunePareto, knitr, rmarkdown, doParallel, igraph,
foreach, randomForest

L Lausser, LM Schaefer, R Szekely, HA Kestler
e1071, knitr, rmarkdown, doParallel, igraph, foreach,
randomForest

The Online Regularized K-Means Clustering Algorithm
c(person("Guangbao", "Guo",role = c("aut", "cre"),
email = "ggb11111111@163.com",
comment =  c(ORCID = "0000-0002-4115-6218")),
person("Miao", "Yu", role="aut"),
person("Haoyue", "Song", role="aut"),
person("Ruiling", "Niu", role="aut"))
Algorithm of online regularized k-means to deal with online multi(single) view data.
The philosophy of the package is described in Guo G. (2020)
<doi:10.1080/02331888.2020.1823979>.
Guangbao Guo [aut, cre] (<https://orcid.org/0000-0002-4115-6218>),
Miao Yu [aut],
Haoyue Song [aut],
Ruiling Niu [aut]