igraph (>= 1.0), meta (>= 2.1), plyr (>= 1.8), graphics,
grDevices, stats, utils, grid, rjags (>= 3-0), truncnorm, Rglpk
'anohe.R' 'arrayize.R' 'blobbogram.R' 'template.R' 'code.R'
'data.R' 'deviance.R' 'solveLP.R' 'inits.R' 'likelihoods.R'
'll-helper.counts.R' 'll.binom.cloglog.R' 'll.binom.log.R'
'll.binom.logit.R' 'll.call.R' 'll.normal.identity.R'
'll.poisson.log.R' 'minimum.diameter.spanning.tree.R'
'mtc.data.studyrow.R' 'mtc.hy.prior.R' 'mtc.model.R'
'mtc.model.consistency.R' 'mtc.model.nodesplit.R'
'mtc.model.regression.R' 'mtc.model.ume.R' 'mtc.model.use.R'
'mtc.network.R' 'mtc.network.xml.R' 'stopIfNotConsistent.R'
'mtc.result.R' 'mtc.run.R' 'nodesplit.R'
'plotCovariateEffect.R' 'priors.R' 'rank.probability.R'
'regression.R' 'relative.effect.R' 'relative.effect.table.R'

'anohe.R' 'arrayize.R' 'blobbogram.R' 'template.R' 'code.R'
'data.R' 'deviance.R' 'forest.R' 'solveLP.R' 'inits.R'
'likelihoods.R' 'll-helper.counts.R' 'll.binom.cloglog.R'
'll.binom.log.R' 'll.binom.logit.R' 'll.call.R'
'll.normal.identity.R' 'll.poisson.log.R'
'minimum.diameter.spanning.tree.R' 'mtc.data.studyrow.R'
'mtc.hy.prior.R' 'mtc.model.R' 'mtc.model.consistency.R'
'mtc.model.nodesplit.R' 'mtc.model.regression.R'
'mtc.model.ume.R' 'mtc.model.use.R' 'mtc.network.R'
'stopIfNotConsistent.R' 'mtc.result.R' 'mtc.run.R'
'nodesplit.R' 'plotCovariateEffect.R' 'priors.R'
'rank.probability.R' 'regression.R' 'relative.effect.R'
'relative.effect.table.R'

An R package providing the Java binary dependency for the
gemtc package

An R package providing the Java JAR for the gemtc package

Generalized Two-Stage Designs for Phase II Single-Arm Studies
One can find single-stage and two-stage designs for a phase II
single-arm study with either efficacy or safety/toxicity endpoints as described in Kim and Wong (2019) <doi:10.29220/CSAM.2019.26.2.163>.

General Engine for Eco-Evolutionary Simulations
c(
person("ETH Zürich", role=c("cph")),
person("Oskar", "Hagen", email = "oskar@hagen.bio", role = c("aut", "cre"), comment = "Landscape Ecology, WSL and ETH Zürich, Switzerland"),
person("Benjamin", "Flueck", email="benjamin.flueck@alumni.ethz.ch", role = c("aut"), comment = "Landscape Ecology, WSL and ETH Zürich, Switzerland"),
person("Fabian", "Fopp", email="fabian.fopp@usys.ethz.ch", role = c("aut"), comment = "Landscape Ecology, WSL and ETH Zürich, Switzerland"),
person(c("Juliano","S."), "Cabral", email = "juliano.sarmento_cabral@uni-wuerzburg.de", role = c("aut"), comment = "Ecosystem Modeling, Center for Computational and Theoretical Biology, University of Würzburg, Würzburg, Germany"),
person("Florian", "Hartig", email = "florian.hartig@biologie.uni-regensburg.de", role = c("aut"), comment = "Theoretical Ecology, University of Regensburg, Regensburg, Germany"),
person("Mikael", "Pontarp", email = "mikael.pontarp@biol.lu.se", role = c("aut"), comment = "Department of Biology, Lund University, Lund, Sweden"),
person("Charles", "Novaes de Santana ", email = "charles.novaes@usys.ethz.ch", role = c("ctb"), comment = "Landscape Ecology, WSL and ETH Zürich, Switzerland"),
person(c("Thiago", "F."), "Rangel", email = "rangel.tf@gmail.com", role = c("aut"), comment = "Department of Ecology, Universidade Federal de Goiás, Goiás, Brazil"),
person("Theo", "Gaboriau", email = "theo.gaboriau@unil.ch", role = c("ctb"), comment = "Depatment of Computational Biology, Lausanne University, Switzerland"),
person("Loïc", "Pellissier", email = "loic.pellissier@usys.ethz.ch", role = c("aut","ths"), comment = "Landscape Ecology, WSL and ETH Zürich, Switzerland"))
Contains an engine for spatially-explicit eco-evolutionary mechanistic models with a modular implementation and several support functions. It allows exploring the consequences of ecological and macroevolutionary processes across realistic or theoretical spatio-temporal landscapes on biodiversity patterns as a general term.
Rcpp (>= 0.12.16), Matrix, methods, utils, raster, gdistance,
sp, stringr, tools, grDevices
ETH Zürich [cph],
Oskar Hagen [aut, cre] (Landscape Ecology, WSL and ETH Zürich,
Switzerland),
Benjamin Flueck [aut] (Landscape Ecology, WSL and ETH Zürich,
Switzerland),
Fabian Fopp [aut] (Landscape Ecology, WSL and ETH Zürich, Switzerland),
Juliano S. Cabral [aut] (Ecosystem Modeling, Center for Computational
and Theoretical Biology, University of Würzburg, Würzburg, Germany),
Florian Hartig [aut] (Theoretical Ecology, University of Regensburg,
Regensburg, Germany),
Mikael Pontarp [aut] (Department of Biology, Lund University, Lund,
Sweden),
Charles Novaes de Santana [ctb] (Landscape Ecology, WSL and ETH Zürich,
Switzerland),
Thiago F. Rangel [aut] (Department of Ecology, Universidade Federal de
Goiás, Goiás, Brazil),
Theo Gaboriau [ctb] (Depatment of Computational Biology, Lausanne
University, Switzerland),
Loïc Pellissier [aut, ths] (Landscape Ecology, WSL and ETH Zürich,
Switzerland)