arm, BayesTree, caret, class, e1071, earth, gam, gbm,
genefilter, glmnet, Hmisc, ipred, LogicReg, MASS, mda, mlbench,
multicore, nnet, party, polspline, randomForest, rpart, SIS,
snow, spls, stepPlr, lattice, ggplot2, sva

arm, BayesTree, caret, class, e1071, earth, gam, gbm,
genefilter, ggplot2, glmnet, Hmisc, ipred, lattice, LogicReg,
MASS, mda, mlbench, nnet, parallel, party, polspline,
randomForest, rpart, SIS, spls, stepPlr, sva

Gen Li <gl2521@cumc.columbia.edu>, Haocheng Ding <haochengding@ufl.edu>, Jiayi Ji <jj2876@caa.columbia.edu>
Dimension reduction of complex data with supervision from auxiliary information. The package contains a series of methods for different data types (e.g., multi-view or multi-way data) including the supervised singular value decomposition (SupSVD), supervised sparse and functional principal component (SupSFPC), supervised integrated factor analysis (SIFA) and supervised PARAFAC/CANDECOMP factorization (SupCP). When auxiliary data are available and potentially affect the intrinsic structure of the data of interest, the methods will accurately recover the underlying low-rank structure by taking into account the supervision from the auxiliary data. For more details, see the paper by Gen Li, <DOI:10.1111/biom.12698>.
RSpectra, psych, fBasics, R.matlab, glmnet, MASS, matrixStats,
timeSeries, stats, matlabr, spls, pracma, matlab

Gen Li <ligen@umich.edu>, Haocheng Ding <haochengding@ufl.edu>, Jiayi Ji <jj2876@caa.columbia.edu>

Claus Thorn Ekstrøm and Thomas Alexander Gerds
Tools for analysing the aggreement of two or more rankings of the same items. Examples are importance rankings of predictor variables and risk predictions of subjects. Benchmarks for agreement are computed based on random permutation and bootstrap.
stats, graphics, Rcpp (>= 0.11.5), prodlim (>= 1.5.7)

Tools for analysing the agreement of two or more rankings of the same items. Examples are importance rankings of predictor variables and risk predictions of subjects. Benchmarks for agreement are computed based on random permutation and bootstrap.