Plot idiograms of karyotypes, plasmids, circular chr. having a set of data.frames
for chromosome data and optionally mark data.
Supports micrometers, cM and Mb.
Seven styles of marks are available: square, dots, cM, cMLeft, cenStyle, upArrow, downArrow;
its legend (label) can be drawn inline or to the right of karyotypes. Idiograms can also be plotted in
concentric circles. It is possible to calculate chromosome indices by Levan et al. (1964)
<doi:10.1111/j.1601-5223.1964.tb01953.x>, karyotype indices of Watanabe et al. (1999)
<doi:10.1007/PL00013869> and Romero-Zarco (1986) <doi:10.2307/1221906> and classify chromosomes
by morphology Guerra (1986) and Levan et al. (1964).
plyr, ggpubr, ggtree, phytools, ggplot2, treeio, knitr,
kableExtra, prettydoc, rvcheck, badger, rmarkdown, RCurl,
rentrez
plyr, knitr, kableExtra, prettydoc, rmarkdown, RCurl,
rvcheck, badger, rentrez

Plot idiograms of several karyotypes having a set of data.frames for chromosome data
and optionally mark data. Supports micrometers, cM and Mb. Marks can have square, dot, or cM style,
its legend (label) can be drawn inline or to the right of karyotypes. Idiograms can also be plotted in
concentric circles. It is possible to calculate chromosome indices by Levan et al. (1964)
<doi:10.1111/j.1601-5223.1964.tb01953.x>, karyotype indices of Watanabe et al. (1999)
<doi:10.1007/PL00013869> and Romero-Zarco (1986) <doi:10.2307/1221906> and classify chromosomes
by morphology Guerra (1986) and Levan et al. (1964).
plyr, ggpubr, ggtree, phytools, ggplot2, treeio, knitr,
kableExtra, prettydoc, rvcheck, badger, rmarkdown, RCurl
plyr, knitr, kableExtra, prettydoc, rmarkdown, RCurl,
rvcheck, badger

Plot idiograms of karyotypes, plasmids, circular chr. having a set of data.frames
for chromosome data and optionally mark data.
Supports micrometers, cM and Mb.
Four styles of marks are available: square, dots, cM, cenStyle, upArrow, downArrow;
its legend (label) can be drawn inline or to the right of karyotypes. Idiograms can also be plotted in
concentric circles. It is possible to calculate chromosome indices by Levan et al. (1964)
<doi:10.1111/j.1601-5223.1964.tb01953.x>, karyotype indices of Watanabe et al. (1999)
<doi:10.1007/PL00013869> and Romero-Zarco (1986) <doi:10.2307/1221906> and classify chromosomes
by morphology Guerra (1986) and Levan et al. (1964).