Interactive Genomic Visualization of Biological Data

Analysis of chromosomal interactions data (correction,
segmentation and comparison)
chromoR provides users with a statistical pipeline for analysing chromosomal interactions data (Hi-C data).It combines wavelet methods and a Bayesian approach for correction (bias and noise) and comparison (detecting significant changes between Hi-C maps) of Hi-C contact maps.In addition, it also support detection of change points in 1D Hi-C contact profiles.

c(
person("Winston", "Chang", role = c("aut", "cre"), email = "winston@rstudio.com"),
person("Barret", "Schloerke", role = c("aut"), email = "barret@rstudio.com"),
person(given = "RStudio", role = c("cph", "fnd"))
)
An implementation of the 'Chrome DevTools Protocol', for controlling a headless Chrome web browser.
Google Chrome or other Chromium-based browser.
chromium: chromium (rpm) or chromium-browser (deb)
curl, jsonlite, websocket (>= 1.2.0), processx, R6, later (>=
1.1.0), promises (>= 1.1.1), magrittr, rlang, fastmap
Winston Chang [aut, cre],
Barret Schloerke [aut],
RStudio [cph, fnd]

Chromosome files in the 'Fasta' format usually contain large sequences like human genome.
Sometimes users have to split these chromosomes into different files according to their
chromosome number. The 'chromseq' can help to handle this. So the selected chromosome sequence can be
used for downstream analysis like motif finding. Howard Y. Chang(2019)
<doi:10.1038/s41587-019-0206-z>.
person(given = "Shaoqian", family = "Ma", email = "897341109@qq.com", role  = c("aut", "cre"))

chron
2.1-6
S original by David James <dj@research.bell-labs.com>,
R port by Kurt Hornik <Kurt.Hornik@ci.tuwien.ac.at>.
Chronological Objects which Can Handle Dates and Times
Copyright (c) 1997 Lucent Technologies.
See the file `COPYING' for further information.

chron
2.1-7
S original by David James <dj@research.bell-labs.com>,
R port by Kurt Hornik <Kurt.Hornik@ci.tuwien.ac.at>.
Chronological Objects which Can Handle Dates and Times
Copyright (c) 1997 Lucent Technologies.
See the file `COPYING' for further information.