James E. Helmreich <James.Helmreich@Marist.edu> and Robert M.
Pruzek <RMPruzek@yahoo.com>.  We are grateful to KuangNan Xiong
for significant work on the functions new to version 2.0:
cstrata.psa, cv.bal.psa, and cv.trans.psa.

Analysis of Parent-Specific DNA Copy Numbers
A.B. Olshen, H. Bengtsson, P. Neuvial, P. Spellman, R.A.
Olshen, V.E. Seshan
Segments allele-specific DNA copy number data to detect
regions with abnormal copy number within each parental
chromosome

A.B. Olshen, H. Bengtsson, P. Neuvial, P.T. Spellman, R.A.
Olshen, V.E. Seshan

A.B. Olshen, H. Bengtsson, P. Neuvial, P.T. Spellman, R.A. Olshen, V.E. Seshan
Segments allele-specific DNA copy number data to detect regions
with abnormal copy number within each parental chromosome

c( person("Henrik", "Bengtsson", role=c("aut", "cre",
"cph"), email="henrikb@braju.com"), person("Pierre", "Neuvial",
role="aut"), person("Venkatraman E.", "Seshan", role="aut"),
person("Adam B.", "Olshen", role="aut"), person("Paul T.",
"Spellman", role="aut"), person("Richard A.", "Olshen",
role="aut"))
Segmentation of allele-specific DNA copy number data and
detection of regions with abnormal copy number within each
parental chromosome.  Both tumor-normal paired and tumor-only
analyses are supported.

c(
person("Henrik", "Bengtsson", role=c("aut", "cre", "cph"),
email="henrikb@braju.com"),
person("Pierre", "Neuvial", role="aut"),
person("Venkatraman E.", "Seshan", role="aut"),
person("Adam B.", "Olshen", role="aut"),
person("Paul T.", "Spellman", role="aut"),
person("Richard A.", "Olshen", role="aut"))
Segmentation of allele-specific DNA copy number data and detection of regions with abnormal copy number within each parental chromosome.  Both tumor-normal paired and tumor-only analyses are supported.

Henrik Bengtsson [aut, cre, cph],
Pierre Neuvial [aut],
Venkatraman E. Seshan [aut],
Adam B. Olshen [aut],
Paul T. Spellman [aut],
Richard A. Olshen [aut]

BioC (>= 3.0), Recommended: Hmisc, aroma.light

c(
person("Henrik", "Bengtsson", role=c("aut", "cre", "cph"),
email="henrikb@braju.com"),
person("Pierre", "Neuvial", role="aut"),
person("Venkatraman E.", "Seshan", role="aut"),
person("Adam B.", "Olshen", role="aut"),
person("Paul T.", "Spellman", role="aut"),
person("Richard A.", "Olshen", role="aut"),
person("Frank E", "Harrell Jr", role="ctb",
comment = "Weighted quantile estimator adopted from Hmisc::wtd.quantile()"))
Henrik Bengtsson [aut, cre, cph],
Pierre Neuvial [aut],
Venkatraman E. Seshan [aut],
Adam B. Olshen [aut],
Paul T. Spellman [aut],
Richard A. Olshen [aut],
Frank E Harrell Jr [ctb] (Weighted quantile estimator adopted from
Hmisc::wtd.quantile())