Methods to detect genetic markers involved in biological
adaptation. 'pcadapt' provides statistical tools for outlier detection based on
Principal Component Analysis.

Fast Principal Component Analysis for Outlier Detection
Keurcien Luu, Michael G.B. Blum, Nicolas Duforet-Frebourg

c(person("Keurcien","Luu", role = c("aut","cre"), email = "keurcien.luu@imag.fr"),
person("Michael","Blum", role = c("aut"), email = "michael.blum@imag.fr"),
person("Nicolas","Duforet-Frebourg", role = c("ctb")))
Keurcien Luu [aut, cre],
Michael Blum [aut],
Nicolas Duforet-Frebourg [ctb]
Methods to detect genetic markers involved in biological
adaptation. 'pcadapt' provides statistical tools for outlier detection based on
Principal Component Analysis. Implements the method described in (Luu, 2016)
<DOI:10.1111/1755-0998.12592>.

c(person("Keurcien", "Luu", role = c("aut"), email = "keurcien.luu@univ-grenoble-alpes.fr"),
person("Michael", "Blum", role = c("aut", "cre"), email = "michael.blum@univ-grenoble-alpes.fr"),
person("Florian", "Privé", role = c("aut"), email = "florian.prive.21@gmail.com"),
person("Eric", "Bazin", role = c("ctb"), email = "eric.bazin@univ-grenoble-alpes.fr"),
person("Nicolas", "Duforet-Frebourg", role = c("ctb")))
data.table, ggplot2, magrittr, mmapcharr, plotly, Rcpp (>=
0.12.8), robust, RSpectra, vcfR
Keurcien Luu [aut],
Michael Blum [aut, cre],
Florian Privé [aut],
Eric Bazin [ctb],
Nicolas Duforet-Frebourg [ctb]

data.table, ggplot2, magrittr, mmapcharr (>= 0.3), plotly,
Rcpp (>= 0.12.8), robust, RSpectra, vcfR

c(
person("Keurcien", "Luu", role = c("aut")),
person("Michael", "Blum", role = c("aut")),
person("Florian", "Privé", role = c("aut", "cre"),
email = "florian.prive.21@gmail.com"),
person("Eric", "Bazin", role = c("ctb")),
person("Nicolas", "Duforet-Frebourg", role = c("ctb")))
bigutilsr (>= 0.3), data.table, ggplot2, magrittr, mmapcharr
(>= 0.3), Rcpp (>= 0.12.8), RSpectra
covr, knitr, plotly, rmarkdown, shiny, testthat, vcfR
Keurcien Luu [aut],
Michael Blum [aut],
Florian Privé [aut, cre],
Eric Bazin [ctb],
Nicolas Duforet-Frebourg [ctb]