R (>= 2.5.0), methods, graphics, RSQLite (>= 0.5-6), wmtsa, robust,
XML, stats

R (>= 2.12.0), methods, graphics, wmtsa, robust, XML, stats
This package provides tools for protein mass spectra
processing including data preparation, denoising, noise
estimation, baseline correction, intensity normalization, peak
detection, peak alignment, peak quantification, and various
functionalities for data ingestion/conversion, mass
calibration, data quality assessment, and protein mass spectra
simulation. It also provides auxiliary tools for data
representation, data visualization, and pipeline processing
history recording and retrieval.

R (>= 2.14.0), methods, graphics, wmtsa, robust, XML, stats

Protein Mass Spectra Dataset from a Prostate Cancer Study
This package provides a dataset of protein mass spectra
generated from patients with prostate cancer, benign prostatic hypertrophy,
and normal controls.

This package provides a dataset of protein mass spectra
generated from patients with prostate cancer, benign prostatic
hypertrophy, and normal controls.

Helper Functions for Second Primary Cancer Analyses
c(
person(given = "Marian", family = "Eberl", role = c("aut", "cre"), email = "marian.eberl@tum.de", comment = c(ORCID = "0000-0001-6584-3197"))
)
A collection of helper functions for analyzing Second Primary Cancer data,
including functions to reshape data, to calculate patient states and analyze cancer incidence.
data.table (>= 1.12.9), dplyr (>= 1.0.0), lubridate, magrittr,
progress, purrr, rlang (>= 0.1.2), sjlabelled, stringr,
tidyselect, tidytable (>= 0.5.5), tidyr (>= 1.0.0), utils
haven, tibble, rmarkdown, knitr, testthat (>= 2.1.0)

data.table (>= 1.12.9), dplyr (>= 1.0.0), lubridate, magrittr,
progress, purrr, rlang (>= 0.1.2), sjlabelled, stringr,
tidyselect, tidytable (>= 0.6.1), tidyr (>= 1.0.0), utils
haven, tibble, rmarkdown, knitr, testthat (>= 3.0.0)

dplyr (>= 1.0.0), lubridate, magrittr, progress, purrr, rlang
(>= 0.1.2), sjlabelled, stringr, tidyselect, tidytable (>=
0.7.2), tidyr (>= 1.0.0)