knitr, rmarkdown, BiocParallel, CRF, MASS, stats, matrixcalc,
mpmi

knitr, rmarkdown, BiocParallel, CRF, MASS, stats, matrixcalc,
mpmi, fitdistrplus, igraph

knitr, rmarkdown, BiocParallel, matrixcalc, mpmi,
fitdistrplus

Classes and Functions to Serve as the Basis for Other 'Gx'
Packages
c(
person("Petr","Smirnov", email = "petr.smirnov@uhnresearch.ca", role = c("aut")),
person("Ian","Smith", email = "ianc.smith@mail.utoronto.ca", role = c("aut")),
person("Christopher", "Eeles", , email = "christopher.eeles@uhnresearch.ca", role = c("aut")),
person("Benjamin", "Haibe-Kains",  email = "benjamin.haibe.kains@utoronto.ca", role = c("aut", "cre"))
)
A collection of functions and classes which serve as the foundation
for our lab's suite of R packages, such as 'PharmacoGx' and 'RadioGx'. This
package was created to abstract shared functionality from other lab package
releases to increase ease of maintainability and reduce code repetition in
current and future 'Gx' suite programs. Major features include a 'CoreSet'
class, from which 'RadioSet' and 'PharmaSet' are derived, along with get and
set methods for each respective slot. Additional functions related to
fitting and plotting dose response curves, quantifying statistical
correlation and calculating area under the curve (AUC) or survival fraction
(SF) are included. For more details please see the included documentation,
as well as:
Smirnov, P., Safikhani, Z., El-Hachem, N., Wang, D., She, A., Olsen, C.,
Freeman, M., Selby, H., Gendoo, D., Grossman, P., Beck, A., Aerts, H.,
Lupien, M., Goldenberg, A. (2015) <doi:10.1093/bioinformatics/btv723>.
Manem, V., Labie, M., Smirnov, P., Kofia, V., Freeman, M., Koritzinksy, M.,
Abazeed, M., Haibe-Kains, B., Bratman, S. (2018) <doi:10.1101/449793>.
lsa, methods, piano, Biobase, stats, rlang
Petr Smirnov [aut],
Ian Smith [aut],
Christopher Eeles [aut],
Benjamin Haibe-Kains [aut, cre]

Collection of scripts for interface between 'Cornerstone' and 'R'.
'Cornerstone' (<https://www.camline.com/>) as a software for engineering analytics supports an interface to 'R'.
The scripts are designed to support an easy usage of this interface.
c(
person("Dirk", "Surmann", NULL, "dirk.surmann@versuchsplanung.de"
, role = c("aut", "cre"), comment = c(ORCID = "0000-0003-0873-137X"))
)
checkmate (>= 1.5) , data.table (>= 1.10) , ranger , vcd
Dirk Surmann [aut, cre] (<https://orcid.org/0000-0003-0873-137X>)