minpack.lm, parallel, rhdf5, knitr, testthat, tictoc,
tikzDevice, hash, numDeriv, staplr, markdown, rmarkdown, errors

Analysis of Plant Pathogen Pathotype Complexities, Distributions
and Diversity
c(
person(given = "Austin G.", family = "McCoy", role = c("aut", "ccp"),
email = "mccoyaus@msu.edu",
comment = c(ORCID = "0000-0003-2483-4184")),
person(given = "Zachary", family = "Noel", role =  c("aut", "ccp"),
email = "noelzach@msu.edu",
comment = c(ORCID = "0000-0001-6375-8300")),
person(given = "Adam H.", family = "Sparks", role = c("aut", "cre"),
email = "adam.sparks@usq.edu.au",
comment = c(ORCID = "0000-0002-0061-8359")),
person(given = "Martin", family = "Chilvers", role = "aut",
email = "chilvers@msu.edu ",
comment = c(ORCID = "0000-0001-8832-1666"))
)
Analysis of plant pathogen pathotype survey data.  Functions
provided calculate distribution of susceptibilities, distribution of
complexities with statistics, pathotype frequency distribution, as well as
diversity indices for pathotypes.  This package is meant to be a direct
replacement for Herrmann, Löwer, Schachtel's (1999)
<doi:10.1046/j.1365-3059.1999.00325.x> Habgood-Gilmour Spreadsheet, 'HaGiS',
previously used for pathotype analysis.
data.table, ggplot2, graphics, pander, stats, utils, vegan
covr, knitr, pkgdown, rmarkdown, testthat, vdiffr
plant-pathology, pathotype, pathogen-survey,
virulence analysis, differential set, assessment scale

c(
person(given = "Austin G.", family = "McCoy", role = c("aut", "ccp"),
email = "mccoyaus@msu.edu",
comment = c(ORCID = "0000-0003-2483-4184")),
person(given = "Zachary", family = "Noel", role =  c("aut", "ccp"),
email = "noelzach@msu.edu",
comment = c(ORCID = "0000-0001-6375-8300")),
person(given = "Adam H.", family = "Sparks", role = c("aut", "cre"),
email = "adam.sparks@usq.edu.au",
comment = c(ORCID = "0000-0002-0061-8359")),
person(given = "Martin", family = "Chilvers", role = "aut",
email = "chilvers@msu.edu ",
comment = c(ORCID = "0000-0001-8832-1666")),
person(given = "Zhian N.", family = "Kamvar", role = c("ctb", "rev"),
comment = c(ORCID = "0000-0003-1458-7108")),
person("Michigan Soybean Promotion Committee", role = "fnd"),
person("Project GREEEN", role = "fnd"),
person("North Central Soybean Research Program", role = "fnd"),
person("GRDC Project DAQ00186", role = "fnd")
)
data.table, ggplot2, pander, stats, utils
Austin G. McCoy [aut, ccp] (<https://orcid.org/0000-0003-2483-4184>),
Zachary Noel [aut, ccp] (<https://orcid.org/0000-0001-6375-8300>),
Adam H. Sparks [aut, cre] (<https://orcid.org/0000-0002-0061-8359>),
Martin Chilvers [aut] (<https://orcid.org/0000-0001-8832-1666>),
Zhian N. Kamvar [ctb, rev] (<https://orcid.org/0000-0003-1458-7108>),
Michigan Soybean Promotion Committee [fnd],
Project GREEEN [fnd],
North Central Soybean Research Program [fnd],
GRDC Project DAQ00186 [fnd]