abind, rasterVis, pROC, nnet, gbm, mda, randomForest, rpart,
MASS, methods, PresenceAbsence, dismo, maxent, earth
ade4, foreign, Hmisc, mgcv, gam, testthat, ecospat, caret

Functions for species distribution modeling, calibration and evaluation,
ensemble of models, ensemble forecasting and visualization. The package permits to run
consistently up to 10 single models on a presence/absences (resp presences/pseudo-absences)
dataset and to combine them in ensemble models and ensemble projections. Some bench of other
evaluation and visualisation tools are also available within the package.
stats, utils, lattice, sp, raster, parallel, reshape, ggplot2,
abind, rasterVis, pROC (>= 1.15.0), nnet, gbm (>= 2.1.3), mda,
randomForest, rpart, MASS, methods, PresenceAbsence, dismo,
caret, ENMeval, doParallel, foreach, earth, dplyr, tidyr,
checkmate, maxnet, purrr, rlang
ade4, foreign, Hmisc, mgcv, gam, testthat, ecospat
'BIOMOD_ConvertOldRun.R' 'BIOMOD_EnsembleForecasting.R'
'BIOMOD_EnsembleModeling.R' 'BIOMOD_FormatingData.R'
'BIOMOD_LoadModels.R' 'BIOMOD_Modeling.R'
'BIOMOD_ModelingOptions.R' 'BIOMOD_Projection.R'
'BIOMOD_RangeSize.R' 'BIOMOD_cv.R' 'BIOMOD_presenceonly.R'
'BIOMOD_tuning.R' 'BinaryTransformation.R' 'Biomod.Models_RE.R'
'BiomodClass.R' 'CVnnet.R' 'CleverCut.R' 'CustomIndexMaker.R'
'Evaluate.models.R' 'FilteringTransformation.R'
'Prepare.Maxent.WorkDir.R' 'ProbDensFunc.R' 'Projection.R'
'Rescaler4.R' 'SampleMat2.R' 'biomod2_models-class.R'
'deprecated_functions.R' 'functionkeep.R' 'level.plot.R'
'makeFormula.R' 'models_scores_graph.R' 'multiple.plot.r'
'pseudo.abs.R' 'response.plot.R' 'sample.factor.levels.R'
'scope.R' 'scopeExpSyst.R' 'sre.R' 'testnull.R'
'transform.outputs.R' 'update_objects.R'
'variables_importance.R'

Wilfried Thuiller [aut, cre],
Damien Georges [aut, cre],
Maya Gueguen [aut],
Robin Engler [aut],
Frank Breiner [aut]
Wilfried Thuiller <wilfried.thuiller@ujf-grenoble.fr>, Damien
Georges <damien.georges2@gmail.com>, Maya Gueguen
<maya.gueguen@univ-grenoble-alpes.fr>
'BIOMOD_ConvertOldRun.R' 'BIOMOD_EnsembleForecasting.R'
'BIOMOD_EnsembleModeling.R' 'BIOMOD_FormatingData.R'
'BIOMOD_LoadModels.R' 'BIOMOD_Modeling.R'
'BIOMOD_ModelingOptions.R' 'BIOMOD_Projection.R'
'BIOMOD_RangeSize.R' 'BIOMOD_cv.R' 'BIOMOD_presenceonly.R'
'BIOMOD_tuning.R' 'BinaryTransformation.R' 'Biomod.Models_RE.R'
'BiomodClass.R' 'CVnnet.R' 'CleverCut.R' 'CustomIndexMaker.R'
'Evaluate.models.R' 'FilteringTransformation.R'
'Prepare.Maxent.WorkDir.R' 'ProbDensFunc.R' 'Projection.R'
'Rescaler4.R' 'SampleMat2.R' 'biomod2_models-class.R'
'deprecated_functions.R' 'functionkeep.R' 'level.plot.R'
'makeFormula.R' 'models_scores_graph.R' 'multiple.plot.r'
'pseudo.abs.R' 'response.plot.R' 'sample.factor.levels.R'
'scope.R' 'scopeExpSyst.R' 'sre.R' 'testnull.R'
'transform.outputs.R' 'update_objects.R'
'variables_importance.R' 'zzz.R'