c(person("Richard", "Bischof", role = "aut"),
person("Daniel", "Turek", role = c("aut", "cre"), email = "danielturek@gmail.com"),
person("Cyril", "Milleret", role = "aut"),
person("Torbjørn", "Ergon", role = "aut"),
person("Pierre", "Dupont", role = "aut"),
person("Soumen", "Dey", role = "aut"),
person("Wei", "Zhang", role = "aut"),
person("Perry", "de Valpine", role = "aut"))
calcWindowSizes.R getWindowIndex.R
integrateIntensityLocal_normal.R integrateIntensityLocal_exp.R
integrateIntensity_normal.R integrateIntensity_exp.R
stratRejectionSampler_normal.R stratRejectionSampler_exp.R
dDispersal_exp.R dHabitatMask.R dbernppAC.R
dbernppACmovement_normal.R dbernppACmovement_exp.R
dbernppDetection_normal.R dbernppLocalACmovement_normal.R
dbernppLocalACmovement_exp.R dbernppLocalDetection_normal.R
dbinomLocal_normal.R dbinom_sparseLocalSCR.R dbinom_vector.R
dnormalizer.R dpoisLocal_normal.R dpoisppAC.R
dpoisppDetection_normal.R dpoisppLocalDetection_normal.R
getLocalObjects.R getLocalTraps.R getMidPointNodes.R
getWindowCoords.R getSparseY.R localTrapCalculations.R
makeConstantNimbleFunction.R marginalVoidProbIntegrand.R
marginalVoidProbNumIntegration.R scaleCoordsToHabitatGrid.R
zzz.R
Richard Bischof [aut],
Daniel Turek [aut, cre],
Cyril Milleret [aut],
Torbjørn Ergon [aut],
Pierre Dupont [aut],
Soumen Dey [aut],
Wei Zhang [aut],
Perry de Valpine [aut]

Provides utility functions, distributions, and fitting methods for Bayesian Spatial Capture-Recapture (SCR) and Open Population Spatial Capture-Recapture (OPSCR) modelling using the nimble package (de Valpine et al. 2017 <doi:10.1080/10618600.2016.1172487 >). Development of the package was motivated primarily by the need for flexible and efficient analysis of large-scale SCR data (Bischof et al. 2020 <doi:10.1073/pnas.2011383117 >). Computational methods and techniques implemented in nimbleSCR include those discussed in Turek et al. 2021 <doi:10.1002/ecs2.3385>; among others. For a recent application of nimbleSCR, see Milleret et al. (2021) <doi:10.1098/rsbl.2021.0128>.
calcWindowSizes.R getWindowIndex.R
integrateIntensityLocal_normal.R integrateIntensityLocal_exp.R
integrateIntensity_normal.R integrateIntensity_exp.R
stratRejectionSampler_normal.R stratRejectionSampler_exp.R
dDispersal_exp.R dHabitatMask.R dbernppAC.R
dbernppACmovement_normal.R dbernppACmovement_exp.R
dbernppDetection_normal.R dbernppLocalACmovement_normal.R
dbernppLocalACmovement_exp.R dbernppLocalDetection_normal.R
dbinomLocal_normal.R dmultiLocal_normal.R dbinom_vector.R
dnormalizer.R dpoisLocal_normal.R dbinomLocal_normalPlateau.R
dbinomLocal_exp.R dpoisppAC.R dpoisppDetection_normal.R
dpoisppLocalDetection_normal.R getLocalObjects.R
getMidPointNodes.R getWindowCoords.R getSparseY.R
getHomeRangeArea.R localTrapCalculations.R
makeConstantNimbleFunction.R marginalVoidProbIntegrand.R
marginalVoidProbNumIntegration.R scaleCoordsToHabitatGrid.R
zzz.R