Luke Harmon <harmon@zoology.ubc.ca>, Jason Weir, Chad Brock, Rich Glor, Wendell Challenger
R, ape (>= 1.9-4), MASS, gtools, mvtnorm, msm
Running macroevolutionary simulation, and estimating parameters related to diversification from comparative phylogenetic data.

Luke Harmon <lukeh@uidaho.edu>, Jason Weir, Chad Brock, Rich Glor, Wendell Challenger
ape (>= 1.9-4), MASS, gtools, mvtnorm, msm

ape (>= 1.9-4), MASS, mvtnorm, msm, ouch

Luke Harmon <lukeh@uidaho.edu>, Jason Weir, Chad Brock, Rich Glor, Wendell Challenger, Gene Hunt

Luke Harmon <lukeh@uidaho.edu>, Jason Weir, Chad Brock, Rich
Glor, Wendell Challenger, Gene Hunt
Running macroevolutionary simulation, and estimating
parameters related to diversification from comparative
phylogenetic data.

Luke Harmon <lukeh@uidaho.edu>, Jason Weir, Chad Brock, Rich
Glor, Wendell Challenger, Gene Hunt, Rich FitzJohn, Matt
Pennell, Graham Slater, Joseph Brown, Josef Uyeda, and Jon
Eastman <jonathan.eastman@gmail.com>
ape (>= 3.0-6), MASS, mvtnorm, msm, subplex, deSolve (>= 1.7),
colorspace, digest, Rcpp (>= 0.9.0), coda, R (>= 2.15.0), ncbit
macroevolutionary simulation and parameter estimation
related to diversification from comparative phylogenetic data

MASS, mvtnorm, msm, subplex, deSolve (>= 1.7), colorspace,
digest, Rcpp (>= 0.9.0), coda, ncbit

Luke Harmon <lukeh@uidaho.edu>, Jason Weir, Chad Brock, Rich
Glor, Wendell Challenger, Gene Hunt, Rich FitzJohn, Matt Pennell, Graham Slater, Joseph Brown, Josef Uyeda, and Jon Eastman <jonathan.eastman@gmail.com>
MASS, mvtnorm, subplex, deSolve (>= 1.7), digest, Rcpp (>=
0.9.0), coda
macroevolutionary simulation and parameter estimation
related to diversification from comparative
phylogenetic data

Luke Harmon, Matthew Pennell, Chad Brock, Joseph Brown, Wendell Challenger,
Jon Eastman, Rich FitzJohn, Rich Glor, Gene Hunt, Liam Revell, Graham Slater,
Josef Uyeda, Jason Weir and CRAN team (corrections in 2022)
MASS, mvtnorm, subplex, deSolve (>= 1.7), digest, Rcpp (>=
0.11.0), coda, ncbit, colorspace, methods, phytools (>= 0.7.31)
Methods for fitting macroevolutionary models to phylogenetic trees
Pennell (2014) <doi:10.1093/bioinformatics/btu181>.