Identify moonlighting non-coding RNAs at the genome level based on the functional annotation and interactome data of ncRNAs and proteins. MoonFinder provides an extensive framework for the detection of protein modules and establishment of RNA-module associations.
annotate,igraph, org.Hs.eg.db, pheatmap, clusterProfiler,
RColorBrewer

annotate,igraph, org.Hs.eg.db, pheatmap, clusterProfiler,
RColorBrewer, grDevices, graphics, stats, utils
Annotation, Clustering, GeneSetEnrichment, GO,
MultipleComparison

Calculations and visualizations related to Geometric
Morphometrics
A toolset for Geometric Morphometrics and mesh processing.
R (>= 2.14.0),
rgl,shapes,parallel,foreach,doParallel,colorRamps,RANN, MASS,
Matrix

Calculations and visualisations related to Geometric
Morphometrics
A toolset for Geometric Morphometrics and mesh processing. This includes (among other stuff) mesh deformations based on reference points, permutation tests, detection of outliers, processing of sliding semi-landmarks.
R (>= 2.14.0), rgl, parallel, foreach, Matrix, doParallel

A toolset for Geometric Morphometrics and mesh processing. This includes (among other stuff) mesh deformations based on reference points, permutation tests, detection of outliers, processing of sliding semi-landmarks and semi-automated surface landmark placement.
rgl (>= 0.93.963), colorRamps, foreach (>= 1.4.0), MASS,
Matrix (>= 1.0-1), parallel, yaImpute, doParallel (>= 1.0.6)

A toolset for Geometric Morphometrics and mesh processing. This
includes (among other stuff) mesh deformations based on reference points,
permutation tests, detection of outliers, processing of sliding
semi-landmarks and semi-automated surface landmark placement.
Rvcg (>= 0.7), rgl (>= 0.93.963), colorRamps, foreach (>=
1.4.0), Matrix (>= 1.0-1), parallel, yaImpute, doParallel (>=
1.0.6), Rcpp

Rvcg, rgl (>= 0.93.963), colorRamps, foreach (>= 1.4.0),
Matrix (>= 1.0-1), parallel, yaImpute, doParallel (>= 1.0.6),
Rcpp

Calculations and Visualisations Related to Geometric
Morphometrics
c(
person("Stefan", "Schlager",, "zarquon42@gmail.com", c("aut", "cre", "cph")),
person("Gregory", "Jefferis",,, c("ctb")),
person("Dryden", "Ian",,,c("cph"))
)
Rvcg (>= 0.7), rgl (>= 0.100.18), foreach (>= 1.4.0), Matrix
(>= 1.0-1), MASS, parallel, doParallel (>= 1.0.6), colorRamps,
Rcpp, graphics, grDevices, methods, stats, utils, jsonlite, sf,
bezier
Stefan Schlager [aut, cre, cph],
Gregory Jefferis [ctb],
Dryden Ian [cph]