A package to visualise Gene Ontology (GO) enrichment
analysis results on gene lists arising from different analyses
such clustering or PCA. The significant GO categories are
visualised as word clouds that can be combined with different
plots summarising the underlying data.
Word cloud summaries of GO enrichment analysis
plyr, grid, gProfileR, reshape2, limma, gtable

A package to visualise Gene Ontology (GO) enrichment analysis
results on gene lists arising from different analyses such clustering or
PCA. The significant GO categories are visualised as word clouds that can
be combined with different plots summarising the underlying data.
This package is now available from Bioconductor 3.0 and
later, only.

Structural Exploration of the Gene Ontology (GO) Knowledge Base
Kalifa Manjang, Frank Emmert-Streib, Shailesh Tripathi, Olli Yli-Harja, Matthias Dehmer
It provides an effective, efficient, and fast way to explore the Gene Ontology (GO).
Given a set of genes, the package contains functions to assess the GO and obtain the
terms associated with the genes and the levels of the GO terms. The package provides
functions for the three different GO ontology. We discussed the methods explicitly in
the following article <doi:10.1038/s41598-020-73326-3>.
GO.db, igraph, network, ggnetwork, dplyr, biomaRt, annotate,
graphics

igraph, network, ggnetwork, dplyr, biomaRt, annotate, graphics

igraph, network, dplyr, biomaRt, annotate, graphics, ggplot2

Gradient Projection Algorithm Rotation for Factor Analysis.
GPL Version 2. See the LICENSE file for details.
Paul Gilbert and Coen Bernaards <pgilbert@bank-banque-canada.ca>

Gradient Projection Algorithm Rotation for Factor Analysis. See ?GPArotation.Intro for more details.

Gradient Projection Algorithm Rotation for Factor
Analysis. See ?GPArotation.Intro for more details.
Paul Gilbert and Coen Bernaards
<pgilbert@bank-banque-canada.ca>

Paul Gilbert and Coen Bernaards <pgilbert.ttv9z@ncf.ca>

Gradient Projection Algorithm Rotation for Factor Analysis. See '?GPArotation.Intro' for more details.
c(
person("Coen", "Bernaards", email = "cab.gparotation@gmail.com", role = c("aut","cre")),
person("Paul", "Gilbert", email = "pgilbert.ttv9z@ncf.ca", role = "aut"),
person("Robert", "Jennrich", role = "aut")
)
Coen Bernaards [aut, cre],
Paul Gilbert [aut],
Robert Jennrich [aut]