Implements a nonparametric statistical test for rank or score data from partially-balanced incomplete block-design experiments.

Implements a nonparametric statistical test for rank or score data
from partially-balanced incomplete block-design experiments.

Vegetation Phenological Cycle and Anomaly Detection using Remote
Sensing Data
Roberto O. Chávez [cre, aut], Sergio A. Estay [cre, aut], Carlos G. Riquelme [ctb]
Calculates phenological cycle and anomalies using a non-parametric
approach applied to time series of vegetation indices derived from remote sensing data
or field measurements. The package implements basic and high-level functions for
manipulating vector data (numerical series) and raster data (satellite derived products).
Processing of very large raster files is supported.
methods, graphics, stats, rgdal, lubridate, rts, snow

methods, graphics, stats, rgdal, lubridate, snow

Roberto O. Chávez [cre, aut], Sergio A. Estay [cre, aut], José A. Lastra [cre,ctb] & Carlos G. Riquelme [ctb]
Calculates phenological cycle and anomalies using a non-parametric
approach applied to time series of vegetation indices derived from remote sensing data
or field measurements. The package implements basic and high-level functions for
manipulating vector data (numerical series) and raster data (satellite derived products).
Processing of very large raster files is supported. For more information, please check
the following paper:
Estay, S., Chávez, R.O. (2018) <doi:10.1101/301143>.

c(
person("Michael", "Raboin", role = c("aut")),
person("Terry", "Therneau", role = c("aut")),
person("Amanda", "Vinson", role = c("aut", "dtc")),
person("R. Mark", "Sharp", email = "rmsharp@me.com",
comment = c(ORCID = "0000-0002-6170-6942"),
role = c("aut", "cre", "cph", "dtc")),
person("Southwest National Primate Research Center NIH grant P51 RR13986",
role = "fnd"),
person("Oregon National Primate Research Center grant P51 OD011092",
role = "fnd"))
Provides genetic tools for colony management and is a derivation
of the work in Amanda Vinson and Michael J Raboin (2015)
<https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4671785/> "A Practical
Approach for Designing Breeding Groups to Maximize Genetic Diversity in a
Large Colony of Captive Rhesus Macaques ('Macaca' 'mulatto')".
It provides a 'Shiny' application with an exposed API.
The application supports five groups of functions:
(1) Quality control of studbooks contained in text files or 'Excel'
workbooks and of pedigrees within 'LabKey' Electronic Health Records
(EHR);
(2) Creation of pedigrees from a list of animals using the 'LabKey' EHR
integration;
(3) Creation and display of an age by sex pyramid plot of the living
animals within the designated pedigree;
(4) Generation of genetic value analysis reports; and
(5) Creation of potential breeding groups with and without proscribed sex
ratios and defined maximum kinships.
anytime, futile.logger, htmlTable, lubridate, Matrix, plotrix,
readxl, Rlabkey, shiny, shinyBS, stringi, utils, WriteXLS
covr, dplyr, ggplot2, grid, kableExtra, knitr, pkgdown, png,
rmarkdown, roxygen2 (>= 7.0.0), testthat
Michael Raboin [aut],
Terry Therneau [aut],
Amanda Vinson [aut, dtc],
R. Mark Sharp [aut, cre, cph, dtc]
(<https://orcid.org/0000-0002-6170-6942>),
Southwest National Primate Research Center NIH grant P51 RR13986 [fnd],
Oregon National Primate Research Center grant P51 OD011092 [fnd]