Larger-than-RAM Disk-Based Data Manipulation Framework
person("Dai", "ZJ", email = "zhuojia.dai@gmail.com",
role = c("aut", "cre"))
A disk-based data manipulation tool for working with arbitrarily
large datasets as long as they fit on disk.
testthat, knitr, rmarkdown, nycflights13, magrittr, shiny

A disk-based data manipulation tool for working with
large-than-RAM datasets. Aims to lower the barrier-to-entry for
manipulating large datasets by adhering closely to popular and
familiar data manipulation paradigms like dplyr verbs and
data.table syntax.
testthat, knitr, rmarkdown, nycflights13, magrittr, shiny,
LaF, readr, rstudioapi

testthat, knitr, rmarkdown, nycflights13, magrittr, shiny,
LaF, readr, rstudioapi, biglm, speedglm, broom, learnr, ggplot2

c(
person("Dai", "ZJ", email = "zhuojia.dai@gmail.com", role = c("aut", "cre")),
person("Jacky", "Poon", role = c("ctb"))
)
testthat (>= 2.1.0), knitr, rmarkdown, nycflights13,
magrittr, shiny, LaF, readr, rstudioapi, biglm, biglmm,
speedglm, broom, learnr, ggplot2

benchmarkme, testthat (>= 2.1.0), knitr, rmarkdown,
nycflights13, magrittr, shiny, LaF, readr, rstudioapi, biglm,
biglmm, speedglm, broom, learnr, ggplot2

testthat (>= 2.1.0), nycflights13, magrittr, shiny, LaF,
readr, rstudioapi, biglm, biglmm, speedglm, broom, ggplot2

testthat (>= 2.1.0), nycflights13, magrittr, shiny, LaF,
readr, rstudioapi, biglm, biglmm, speedglm, broom, ggplot2,
covr

A disk-based data manipulation tool for working with
large-than-RAM datasets. Aims to lower the barrier-to-entry for
manipulating large datasets by adhering closely to popular and
familiar data manipulation paradigms like 'dplyr' verbs and
'data.table' syntax.

nycflights13, magrittr, shiny, LaF, readr, rstudioapi, biglm,
biglmm, speedglm, broom, ggplot2

A Pipeline to Analyze Resistance and Tolerance from Drug Disk
Diffusion Assays
c(
person("Aleeza", "Gerstein", email="gerst035@umn.edu", role=c("aut", "cre")),
person("Inbal", "Hecht", email="inbal.hecht@gmail.com", role="ctb"))
A pipeline to analyze photographs of disk diffusion plates. This removes the need to analyze the plates themselves, and thus analysis can be done separate from the assay. Furthermore, diskImageR removes potential researcher bias, by quantitative assessment of drug resistance as the zone diameter at multiple cutoff values of growth inhibition. This method also extends the disk diffusion assay by measuring drug tolerance (in addition to drug resistance) as the fraction of the subpopulation that is able to grow above the resistance point ("FoG"), and drug sensitivity as the rate of change from no growth to full growth ("slope").
Aleeza Gerstein [aut, cre],
Inbal Hecht [ctb]