Fitting Ising Models Using the ELasso Method

Sampling methods and distribution functions for the Ising model
This package can be used to sample states from the Ising model and compute the probability of states. Sampling can be done for any number of nodes, but due to the intractibility of the Ising model the distribution can only be computed up to ~10 nodes.

Sampling Methods and Distribution Functions for the Ising Model
Sample states from the Ising model and compute the probability of states. Sampling can be done for any number of nodes, but due to the intractibility of the Ising model the distribution can only be computed up to ~10 nodes.

Functions to perform isotonic regression.
Linear order and unimodal order (univariate)
isotonic regression; bivariate isotonic regression
with linear order on both variables.

Linear order and unimodal order (univariate) isotonic
regression; bivariate isotonic regression with linear order on
both variables.

Functions to Perform Isotonic Regression

Does linear order and unimodal order isotonic regression.

Transformed and bootstrap confidence intervals for current
status data
Byeong Yeob Choi, Jason P. Fine and M. Alan Brookhart
This packages calculated transformed Wald-type confidence intervals, bootstrap confidence intervals, bootstrap-Wald confidence intervals for current status data

Confidence intervals for current status data based on
transformations and bootstrap.
Some functions for confidence intervals for current status data based on transformations and bootstrap.

Isomorphism Check for Multi-Stage Factorial Designs with
Randomization Restrictions
Neil Spencer [aut, cre], Pritam Ranjan [aut,cre], Franklin Mendivil [ctb]
Contains functions to check the isomorphism of multi-stage factorial designs with randomisation restrictions based on balanced spreads and balanced covering stars of PG(n-1,2) as described in Spencer, Ranjan and Mendivil (2019) <doi:10.1007/s42519-019-0064-5>.

person(
given = "Jan",
family = "Lisec",
email = "jan.lisec@bam.de",
role = c("aut", "cre"),
comment = c(ORCID = "0000-0003-1220-2286")
)
Analyzing Inductively Coupled Plasma - Mass Spectrometry (ICP-MS)
measurement data to evaluate isotope ratios (IRs) is a complex process.
The 'IsoCor' package facilitates this process and renders it reproducible
by providing a function to run a 'Shiny'-App locally in any web browser.
In this App the user can upload data files of various formats, select ion
traces, apply peak detection and perform calculation of IRs and delta values.
Results are provided as figures and tables and can be exported.
The App, therefore, facilitates data processing of ICP-MS experiments to
quickly obtain optimal processing parameters compared to traditional 'Excel'
worksheet based approaches. A more detailed description can be found in the
corresponding article "Data processing made easy: standalone tool for
automated calculation of isotope ratio from transient signals – IsoCor"
by Tukhmetova et al. in Journal of Analytical Atomic Spectrometry (JAAS).
The most recent version of 'IsoCor' can be tested online
at <https://jali.shinyapps.io/isocor>.
bsplus, DT, golem, htmltools, MALDIquant, markdown, plyr,
rmarkdown, shiny, shinyalert, shinyjs
config, pkgload, rsconnect, testthat (>= 3.0.0)