knitr, rmarkdown, testthat, tidyverse, Rglpk,
ROI.plugin.ecos, ROI.plugin.glpk

A simple package for Flux Balance Analysis and related
metabolic modeling techniques. Functions are provided for: parsing
models in tabular format, converting parsed metabolic models to input
formats for common linear programming solvers, and
evaluating and applying gene-protein-reaction mappings. In addition, there
are wrappers to parse a model, select a solver, find the metabolic fluxes,
and return the results applied to the original model. Compared to other
packages in this field, this package puts a much heavier focus on
providing reusable components that can be used in the design of new
implementation of new techniques, in particular those that involve large
parameter sweeps.
assertthat, Matrix, dplyr, tidyr, purrr, tibble, stringr,
magrittr, rlang, ROI, ROI.plugin.ecos

assertthat, dplyr, magrittr, Matrix, purrr, rlang, ROI,
ROI.plugin.ecos, stringr, tibble, tidyr

spelling, jsonlite, curl, knitr, rmarkdown, testthat

A toolkit for Flux Balance Analysis and related
metabolic modeling techniques. Functions are provided for: parsing
models in tabular format, converting parsed metabolic models to input
formats for common linear programming solvers, and
evaluating and applying gene-protein-reaction mappings. In addition, there
are wrappers to parse a model, select a solver, find the metabolic fluxes,
and return the results applied to the original model. Compared to other
packages in this field, this package puts a much heavier focus on
providing reusable components that can be used in the design of new
implementation of new techniques, in particular those that involve large
parameter sweeps. For a background on the theory, see What is Flux Balance
Analysis <doi:10.1038/nbt.1614>.

Does family-based gene by environment interaction tests, and joint gene, gene-environment interaction test.

Gene by Environment Interaction and Conditional Gene Tests for Nuclear Families
Does family-based gene by environment interaction tests, joint gene, gene-environment interaction test, and a test of a set of genes conditional on another set of genes.