Alternative splicing represents an additional and underappreciated layer of complexity underlying gene expression profiles. Nevertheless, there remains hitherto a paucity of software to investigate splicing dynamics at single-cell resolution. 'MARVEL' enables splicing analysis of single-cell RNA-sequencing data generated from plate- and droplet-based library preparation methods.

Simulation, Estimation and Selection of MARX Models
c(person("Sean", "Telg", email = "j.telg@maastrichtuniversity.nl", role = c("aut","cre","cph")), person("Alain", "Hecq", email = "a.hecq@maastrichtuniversity.nl", role = "ctb"), person("Lenard", "Lieb", email = "l.lieb@maastrichtuniversity.nl", role = "ctb"))
Sean Telg [aut, cre, cph], Alain Hecq [ctb], Lenard Lieb [ctb]
Simulate, estimate (by t-MLE) and select mixed causal-noncausal autoregressive models with possibly exogenous regressors, using methods proposed in Lanne and Saikkonen (2011) <doi:10.2202/1941-1928.1080> and Hecq et al. (2016) <doi:10.15609/annaeconstat2009.123-124.0307>.

Simulation, Estimation, Model Selection and Forecasting for MARX
Models
Sean Telg [aut, cre, cph],
Alain Hecq [ctb],
Lenard Lieb [ctb]
Simulate, estimate (by t-MLE), select and forecast mixed causal-noncausal autoregressive models with possibly exogenous regressors, using methods proposed in Lanne and Saikkonen (2011) <doi:10.2202/1941-1928.1080> and Hecq et al. (2016) <doi:10.15609/annaeconstat2009.123-124.0307>.
matlab, fBasics, tseries, stabledist, metRology

R (>= 2.5.0), grDevices, graphics, stats, utils
S original by Venables & Ripley.
R port by Brian Ripley <ripley@stats.ox.ac.uk>, following earlier
work by Kurt Hornik and Albrecht Gebhardt.
Functions and datasets to support Venables and
Ripley, 'Modern Applied Statistics with S' (4th edition).
Main Package of Venables and Ripley's MASS

R (>= 2.10.0), grDevices, graphics, stats, utils

R (>= 2.12.0), grDevices, graphics, stats, utils
S original by Venables & Ripley. R port by Brian Ripley,
following partial ports by Kurt Hornik and Albrecht Gebhardt
around 1998.
Functions and datasets to support Venables and Ripley,
'Modern Applied Statistics with S' (4th edition, 2002).
Support Functions and Datasets for Venables and Ripley's MASS