Christian Hennig <chrish@stats.ucl.ac.uk>, Bernhard Hausdorf
<Hausdorf@zoologie.uni-hamburg.de>
Distance-based parametric bootstrap tests for clustering,
mainly intended for presence-absence data and abundance data
(clustering of species distribution ranges). Jaccard,
Kulczynski, quantitative Kulczynski and geco distance measures,
clustering of presence-absence and abundance data, and nearest
neighbor based noise detection (R port of Byers and Raftery's
(1998) "NNclean"). Main functions are prabtest, abundtest (for
testing), prabclust (for clustering), prabinit (for preparing
the data) and NNclean (for noise detection). The help-pages for
prabtest, abundtest and prabclust contain simple standard
executions. Note that the use of the package mclust (called by
function prabclust) is protected by a special license, see
http://www.stat.washington.edu/mclust/license.txt, particularly
point 6.

Functions for clustering of presence-absence, abundance and
multilocus genetic data
mclust, spdep, maptools, foreign, mvtnorm
Distance-based parametric bootstrap tests for clustering,
mainly intended for presence-absence data and abundance data
(clustering of species distribution ranges). Jaccard,
Kulczynski, quantitative Kulczynski and geco distance measures,
clustering of presence-absence and abundance data and
multilocus genetical data for species delimitation, nearest
neighbor based noise detection (R port of Byers and Raftery's
(1998) "NNclean"). Try package?prabclus for on overview. Note
that the use of the package mclust (called by function
prabclust) is protected by a special license, see
http://www.stat.washington.edu/mclust/license.txt, particularly
point 6.

Distance-based parametric bootstrap tests for clustering
with spatial neighborhood information. Some distance measures,
Clustering of presence-absence, abundance and multilocus
genetical data for species delimitation, nearest neighbor based
noise detection. Try package?prabclus for on overview. Note
that the use of the package mclust (called by function
prabclust) is protected by a special license, see
http://www.stat.washington.edu/mclust/license.txt, particularly
point 6.