assertthat, deSolve, dplyr, ggplot2, ggrepel, grid, lubridate,
methods, plotly, plyr, progress, Rcpp, reshape2, rlang,
lifecycle
'helpers.R' 'MizerParams-class.R' 'MizerSim-class.R'
'reproduction.R' 'saveParams.R' 'species_params.R'
'setColours.R' 'setInteraction.R' 'setPredKernel.R'
'setSearchVolume.R' 'setMaxIntakeRate.R' 'setMetabolicRate.R'
'setMetadata.R' 'setExtMort.R' 'setReproduction.R'
'setResource.R' 'setFishing.R' 'setInitialValues.R'
'setBevertonHolt.R' 'upgrade.R' 'selectivity_funcs.R'
'pred_kernel_funcs.R' 'resource_dynamics.R' 'project.R'
'mizer-package.R' 'project_methods.R' 'rate_functions.R'
'summary_methods.R' 'plots.R' 'plotBiomassObservedVsModel.R'
'plotYieldObservedVsModel.R' 'animateSpectra.R'
'newMultispeciesParams.R' 'wrapper_functions.R'
'newSingleSpeciesParams.R' 'steady.R' 'test-helpers.R'
'extension.R' 'data.R' 'RcppExports.R' 'deprecated.R'
'get_initial_n.R' 'compareParams.R' 'customFunction.R'
'manipulate_species.R' 'calibrate.R' 'match.R'

2D and 3D movement-based kernel density estimates (MKDEs).
Jeff A. Tracey, James Sheppard, Jun Zhu, Robert Sinkovts, Amit Chourasia, Glenn Lockwood, and Robert N. Fisher
Provides functions to compute and visualize movement-based kernel density estimates (MKDEs) for animal utilization distributions in 2 or 3 spatial dimensions.

Routines for fitting kinetic models with one or more state
variables to chemical degradation data
Calculation routines based on the FOCUS Kinetics Report
(2006)

Calculation routines based on the FOCUS Kinetics Report
(2006). Includes a function for conveniently defining
differential equation models, choice of the optimisation
methods made available by the FME package (default is a
Levenberg-Marquardt variant). Initial values for parameters of
the differential equations and time zero values of the state
values can be defaults, user defined or a combination of a fit
for the parent compound carried out by the kinfit package and
defaults. DT50 and DT90 values are calculated as well as the
chi2 error level as defined by the FOCUS Kinetics Group.