Algorithmic experimental designs. Calculates exact and approximate
theory experimental designs for D,A, and I criteria. Very large
designs may be created. Experimental designs may be blocked or blocked
designs created from a candidate list, using several criteria.
The blocking can be done when whole and within plot factors
interact.

Algorithmic experimental designs. Calculates exact and
approximate theory experimental designs for D,A, and I
criteria. Very large designs may be created. Experimental
designs may be blocked or blocked designs created from a
candidate list, using several criteria. The blocking can be
done when whole and within plot factors interact.

Algorithmic experimental designs. Calculates exact and
approximate theory experimental designs for D,A, and I
criteria. Very large designs may be created. Experimental
designs may be blocked or blocked designs created from a
candidate list, using several criteria.  The blocking can be
done when whole and within plot factors interact.

Orphaned on 2014-02-11: the maintainer is unresponsive.

Haplotype Two Snips Out of a Paired Group of Patients
Two unordered pairs of data of two different snips positions is haplotyped by resolving a small number ob closed equations.

Comparison of Alternative Multiple Sequence Alignments
Methods for comparing two alternative multiple
sequence alignments (MSAs) to determine whether they align homologous residues in
the same columns as one another. It then classifies similarities and differences
into conserved gaps, conserved sequence, merges, splits or shifts of one MSA relative
to the other. Summarising these categories for each MSA column yields information
on which sequence regions are agreed upon my both MSAs, and which differ. Several
plotting functions enable easily visualisation of the comparison data for analysis.
Rcpp (>= 0.11.6), seqinr, ggplot2, reshape2

Comparison of Alternative Multiple Aequence Alignments

Rcpp (>= 0.11.6), seqinr, ggplot2, reshape2, tools, utils

Computes all of a word's possible spellings.
Contains functions possSpells.fnc and
batch.possSpells.fnc.