c(person("Chi", "Liu", role = c("aut", "cre", "cph"), email = "liuchi0426@126.com"),
person("Minjie", "Yao", role = c("aut", "cph"), email = "yaomj@fafu.edu.cn"),
person("Xiangzhen", "Li", role = "aut", email = "lixz@cib.ac.cn")
)
Chi Liu [aut, cre, cph],
Minjie Yao [aut, cph],
Xiangzhen Li [aut]
reshape2, GUniFrac, MASS, ggpubr, randomForest, ggdendro,
ggrepel, agricolae, gridExtra, picante, pheatmap, igraph,
rgexf, tidytree, mice, ggtree

c(person("Chi", "Liu", role = c("aut", "cre"), email = "liuchi0426@126.com"),
person("Felipe", "Mansoldo", role = "cph", email = "mansoldo@micro.ufrj.br"),
person("Umer Zeeshan", "Ijaz", role = "cph", email = "Umer.Ijaz@glasgow.ac.uk"),
person("Chenhao", "Li", role = "cph", email = "CLI40@mgh.harvard.edu"),
person("Yang", "Cao", role = "cph", email = "yiluheihei@gmail.com"),
person("Minjie", "Yao", role = "cph", email = "yaomj@fafu.edu.cn"),
person("Xiangzhen", "Li", role = "cph", email = "lixz@cib.ac.cn")
)
Chi Liu [aut, cre],
Felipe Mansoldo [cph],
Umer Zeeshan Ijaz [cph],
Chenhao Li [cph],
Yang Cao [cph],
Minjie Yao [cph],
Xiangzhen Li [cph]

GUniFrac, MASS, ggpubr, randomForest, ggdendro, ggrepel,
agricolae, gridExtra, picante, pheatmap, igraph, rgexf,
tidytree, mice, ggtree

A series of statistical and plotting approaches in microbial community ecology based on the R6 class. The classes are designed for data preprocessing, taxa abundance plotting, alpha diversity statistics, beta diversity statistics, differential abundance test, environmental data analysis, null model analysis, network analysis, machine learning and functional analysis.

person("Thomas", "Ng", email = "tngthomasng@gmail.com", role = c("aut", "cre"))
A downstream bioinformatics tool to construct and assist
curation of microhaplotypes from short read sequences.

c(person("Quinn", "Payton", role="aut", email =
"Payton.Quinn@epa.gov"), person("Tony", "Olsen", role="aut",
email = "Olsen.Tony@epa.gov"), person("Marc", "Weber",
role="ctb", email = "Weber.Marc@epa.gov"), person("Michael",
"McManus", role="ctb", email = "McManus.Michael@epa.gov"),
person("Tom", "Kincaid", role="cre", email =
"Kincaid.Tom@epa.gov"))
Quinn Payton <Payton.Quinn@epa.gov> and Tony Olsen
<Olsen.Tony@epa.gov> with contributions from Marc Weber,
Michael McManus, and Tom Kincaid
R (>= 2.10), ggplot2, RColorBrewer, rgdal, grid
This group of functions simplifies the creation of linked
micromap plots.