graphics, stats, stringr (>= 1.0.0), digest, grid, grDevices,
gridBase, colorspace, RColorBrewer, foreach, doParallel,
ggplot2, reshape2, BiocManager, Biobase
fastICA, doMPI, bigmemory (>= 4.2), synchronicity(>= 1.3.2),
corpcor, xtable, devtools, knitr, bibtex, RUnit, mail

fastICA, doMPI, bigmemory (>= 4.2), synchronicity(>= 1.3.2),
corpcor, xtable, devtools, knitr, RUnit, mail

R (>= 3.0.0), methods, utils, registry, rngtools (>= 1.2.3),
cluster
graphics, stats, stringr (>= 1.0.0), digest, grid, grDevices,
gridBase, colorspace, RColorBrewer, foreach, doParallel,
ggplot2, reshape2, Biobase, codetools, BiocManager
'colorcode.R' 'options.R' 'grid.R' 'atracks.R' 'aheatmap.R'
'algorithmic.R' 'nmf-package.R' 'rmatrix.R' 'utils.R'
'versions.R' 'NMF-class.R' 'transforms.R' 'Bioc-layer.R'
'NMFstd-class.R' 'NMFOffset-class.R' 'heatmaps.R'
'NMFns-class.R' 'nmfModel.R' 'fixed-terms.R' 'NMFfit-class.R'
'NMFSet-class.R' 'NMFStrategy-class.R' 'registry.R'
'NMFSeed-class.R' 'NMFStrategyFunction-class.R'
'NMFStrategyIterative-class.R' 'NMFplots.R'
'registry-algorithms.R' 'algorithms-base.R' 'algorithms-lnmf.R'
'algorithms-lsnmf.R' 'algorithms-pe-nmf.R' 'algorithms-siNMF.R'
'algorithms-snmf.R' 'data.R' 'extractFeatures.R' 'parallel.R'
'registry-seed.R' 'nmf.R' 'rnmf.R' 'run.R' 'seed-base.R'
'seed-ica.R' 'seed-nndsvd.R' 'setNMFClass.R' 'simulation.R'
'tests.R' 'vignetteFunctions.R'

Biobase, RColorBrewer, fastICA, bigmemory, doMC
utils.R options.R NMF-class.R NMFstd-class.R NMFOffset-class.R
NMFns-class.R NMFfit-class.R NMFSet-class.R registry.R
NMFStrategy-class.R NMFStrategyFunction-class.R
NMFStrategyIterative-class.R snmf.R lnmf.R pe-nmf.R ica.R
nndsvd.R seed.R nmf.R Bioc-layer.R nmf-package.R

Biobase, RColorBrewer, fastICA, bigmemory, doMC,
synchronicity

Biobase, RColorBrewer, fastICA, bigmemory, doMC,
synchronicity, corpcor

Biobase, RColorBrewer, fastICA, bigmemory, doMC,
synchronicity, corpcor, xtable

Biobase, RColorBrewer, fastICA, bigmemory, doMC,
synchronicity, corpcor, xtable, parallel