Monica Leu <monica.leu@ki.se>
Kamila Czene <kamila.czene@ki.se>
Marie Reilly PhD <marie.reilly@ki.se>
Population Lab is a tool for constructing a virtual electronic
population of related individuals evolving over calendar time, by using
vital statistics, such as mortality and fertility, and disease incidence
rates.

Tools for Simplifying the Population and Querying of SQLite
Databases
c(person("Daniel", "Bottomly", role=c("cre", "aut"), email="bottomly@ohsu.edu"),
person("Shannon", "McWeeney", role="aut"),
person("Beth", "Wilmot", role="aut"))
DBI, igraph, lazyeval, RSQLite (>= 1.0.0)
Provides objects and accompanying methods which facilitates populating and querying SQLite databases.
Daniel Bottomly [cre, aut],
Shannon McWeeney [aut],
Beth Wilmot [aut]

igraph, lazyeval, dbplyr, RSQLite (>= 2.0)

Tools for simplifying the population and querying of SQLite
databases

an R package for genetic analysis of populations with mixed
reproduction
Zhian N. Kamvar <kamvarz@science.oregonstate.edu>, Javier F.
Tabima <tabimaj@onid.orst.edu>, Niklaus J. Grunwald
<grunwaln@science.oregonstate.edu>
Population genetic analyses for hierarchical analysis of
partially clonal populations built upon the architecture of the
adegenet package.
R (>= 2.15.1), adegenet, pegas, vegan, ggplot2, phangorn, ape,
igraph
adegenet, pegas, vegan, ggplot2, phangorn, ape, igraph
'Index_calculations.r' 'file_handling.r' 'sample_schemes.r'
'visualizations.r' 'mlg.r' 'bruvo.r' 'data_subset.r'
'internal.r' 'sandbox.r' 'distances.r'

Zhian N. Kamvar <kamvarz@science.oregonstate.edu>, Javier F. Tabima
<tabimaj@onid.orst.edu>, Niklaus J. Grunwald
<grunwaln@science.oregonstate.edu>
Population genetic analyses for hierarchical analysis of partially
clonal populations built upon the architecture of the adegenet package.

vegan, ggplot2, phangorn, ape, igraph, methods

vegan, ggplot2, phangorn, ape, igraph, pegas, methods

vegan, ggplot2, phangorn, ape, igraph, methods, ade4, pegas,
reshape2

Genetic Analysis of Populations With Mixed Reproduction
c(person(c("Zhian", "N."), "Kamvar", role = c("cre", "aut"),
email = "kamvarz@science.oregonstate.edu"),
person(c("Javier", "F."), "Tabima", role = "aut",
email = "tabimaj@onid.orst.edu"),
person(c("Niklaus", "J."), "Grunwald", role = "ths",
email = "grunwaln@science.oregonstate.edu"))
vegan, ggplot2, phangorn, ape (>= 3.1-1), igraph, methods,
ade4, pegas, reshape2
Zhian N. Kamvar [cre, aut],
Javier F. Tabima [aut],
Niklaus J. Grunwald [ths]