Predicting Disease Spread from Flow Data
c(person("Pawel", "Piatkowski", email = "pawel.piatkowski@posteo.net", role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-0822-5592")),
person("Paula", "Moraga", email = "p.e.moraga-serrano@lancaster.ac.uk", role = "aut",
comment = c(ORCID = "0000-0001-5266-0201")),
person("Isobel", "Blake", email = "isobel.blake@imperial.ac.uk", role = c("ctb", "dtc")),
person("Thibaut", "Jombart", email = "thibautjombart@gmail.com", role = "aut"),
person("VP", "Nagraj", email = "vpnagraj@virginia.edu", role = "aut"),
person("Zhian N.", "Kamvar", email = "zkamvar@gmail.com", role = "aut",
comment = c(ORCID = "0000-0003-1458-7108")),
person("Salla E.", "Toikkanen", email = "Salla.e.toikkanen@gmail.com", role = "aut"))
Provides functions and classes designed to handle and visualise
epidemiological flows between locations. Also contains a statistical method
for predicting disease spread from flow data initially described in
Dorigatti et al. (2017) <doi:10.2807/1560-7917.ES.2017.22.28.30572>.
This package is part of the RECON (<http://www.repidemicsconsortium.org/>)
toolkit for outbreak analysis.
epicontacts, leaflet, ggmap, geosphere, ggplot2, tibble, sp,
htmlwidgets, stats, htmltools, visNetwork
testthat, roxygen2, knitr, outbreaks, vdiffr, curl, rmarkdown
Pawel Piatkowski [aut, cre] (<https://orcid.org/0000-0002-0822-5592>),
Paula Moraga [aut] (<https://orcid.org/0000-0001-5266-0201>),
Isobel Blake [ctb, dtc],
Thibaut Jombart [aut],
VP Nagraj [aut],
Zhian N. Kamvar [aut] (<https://orcid.org/0000-0003-1458-7108>),
Salla E. Toikkanen [aut]

Interface Package for the 'EpiGraphDB' Platform
c(
person("Yi", "Liu", email = "yi6240.liu@bristol.ac.uk",
role = c("cre", "aut")
),
person("Valeriia", "Haberland", email = "valeriia.haberland@bristol.ac.uk",
role = c("aut")
),
person("Marina", "Vabistsevits", email = "ny19205@bristol.ac.uk",
role = c("aut")
),
person("Tom", "Gaunt", email = "Tom.Gaunt@bristol.ac.uk",
role = c("aut")
),
person(given = "MRC IEU", role = c("cph"))
)
The interface package to access data from the
'EpiGraphDB' <https://epigraphdb.org> platform.
It provides easy access to the 'EpiGraphDB' platform with functions that
query the corresponding REST endpoints on the API <https://api.epigraphdb.org>
and return the response data in the 'tibble' data frame format.
testthat, roxygen2, knitr, rmarkdown, spelling, devtools,
usethis, pkgdown, styler, lintr, covr, igraph, gtools, stringr,
dplyr, ggplot2
magrittr, tibble, httr, glue, purrr, jsonlite
Yi Liu [cre, aut],
Valeriia Haberland [aut],
Marina Vabistsevits [aut],
Tom Gaunt [aut],
MRC IEU [cph]