Fast, Sensitive, and Accurate Integration of Single Cell Data
c(
person("Ilya", "Korsunsky", email = "ilya.korsunsky@gmail.com",
role = c("cre", "aut"), comment = c(ORCID = "0000-0003-4848-3948")),
person("Nghia", "Millard", email = "nmillard@g.harvard.edu",
role = "aut", comment = c(ORCID = "0000-0002-0518-7674")),
person("Jean", "Fan", email = "jeanfan@fas.harvard.edu",
role = c("aut", "ctb"), comment = c(ORCID = "0000-0002-0212-5451")),
person("Kamil", "Slowikowski", email = "kslowikowski@gmail.com",
role = c("aut", "ctb"), comment = c(ORCID = "0000-0002-2843-6370")),
person("Miles", "Smith",
role = c("ctb")),
person("Soumya", "Raychaudhuri",
role = c("aut"), comment = c(ORCID = "0000-0002-1901-8265"))
)
Implementation of the Harmony algorithm for single cell integration, described in Korsunsky et al <doi:10.1038/s41592-019-0619-0>. Package includes a standalone Harmony function and interfaces to external frameworks.
dplyr, cowplot, tidyr, ggplot2, irlba, Matrix, methods,
tibble, rlang
Ilya Korsunsky [cre, aut] (<https://orcid.org/0000-0003-4848-3948>),
Nghia Millard [aut] (<https://orcid.org/0000-0002-0518-7674>),
Jean Fan [aut, ctb] (<https://orcid.org/0000-0002-0212-5451>),
Kamil Slowikowski [aut, ctb] (<https://orcid.org/0000-0002-2843-6370>),
Miles Smith [ctb],
Soumya Raychaudhuri [aut] (<https://orcid.org/0000-0002-1901-8265>)

SingleCellExperiment, Seurat (>= 4.1.1), testthat, knitr,
rmarkdown

Wrangle Phylogenetic Distance Matrices and Other Utilities
person("Anders", "Gonçalves da Silva", email = "andersgs@gmail.com", role = c("aut", "cre"))
Harriet was Charles Darwin's pet tortoise (possibly). 'harritr'
implements some function to manipulate distance matrices and phylogenetic trees
to make it easier to plot with 'ggplot2' and to manipulate using 'tidyverse'
tools.
Anders Gonçalves da Silva <andersgs@gmail.com>

Harriet was Charles Darwin's pet tortoise (possibly). 'harrietr'
implements some function to manipulate distance matrices and phylogenetic trees
to make it easier to plot with 'ggplot2' and to manipulate using 'tidyverse'
tools.