Replication Timing Profiling using DNA Copy Number
Create, Plot and Compare Replication Timing Profiles. The method is described in Muller et al., (2014) <doi: 10.1093/nar/gkt878>.

stats, utils, methods, grDevices, colourpicker

Generates a Project and Repo for Easy Initialization of a
Workshop
person(c("Jared", "P."), "Lander", email = "packages@jaredlander.com", role = c("aut", "cre"))
Generates a project and repo for easy initialization of a GitHub repo for R workshops. The repo includes a README with instructions to ensure that all users have the needed packages, an 'RStudio' project with the right directories and the proper data. The repo can then be used for hosting code taught during the workshop.

Microsoft Word, Microsoft Powerpoint and HTML documents
generation from R
An R package for creating Microsoft Word document (>=2007),
Microsoft Powerpoint document (>=2007) and HTML documents from R. There are
several features to let you format and present R outputs ; e.g. Editable
Vector Graphics, functions for complex tables reporting, reuse of corporate
template document (*.docx and *.pptx). You can use the package as a tool
for fast reporting and as a tool for reporting automation. The package does
not require any installation of Microsoft product to be able to write
Microsoft files (docx and pptx).

c(
person("David", "Gohel", role = c("aut", "cre"),
email = "david.gohel@lysis-consultants.fr"),
person("Bootstrap", role = c("ctb", "cph"),
comment = "Bootstrap development team"),
person("jQuery", role = c("ctb", "cph"),
comment = "The jQuery Foundation"),
person("Dmitry Baranovskiy", role = c("ctb", "cph"),
comment = "raphael and g.raphael javascript libraries" ) )
David Gohel [aut, cre],
Bootstrap [ctb, cph] (Bootstrap development team),
jQuery [ctb, cph] (The jQuery Foundation),
Dmitry Baranovskiy [ctb, cph] (raphael and g.raphael javascript
libraries)

Microsoft Word, Microsoft Powerpoint and HTML Documents
Generation
c(
person("David", "Gohel", role = c("aut", "cre"),
email = "david.gohel@lysis-consultants.fr"),
person("Bootstrap", role = c("ctb", "cph"),
comment = "Bootstrap development team"),
person("jQuery", role = c("ctb", "cph"),
comment = "The jQuery Foundation"),
person("Dmitry Baranovskiy", role = c("ctb", "cph"),
comment = "raphael javascript libraries" ) )
David Gohel [aut, cre],
Bootstrap [ctb, cph] (Bootstrap development team),
jQuery [ctb, cph] (The jQuery Foundation),
Dmitry Baranovskiy [ctb, cph] (raphael javascript
libraries)
Create Microsoft Word document (>=2007),
Microsoft Powerpoint document (>=2007) and HTML documents from R. There are
several features to let you format and present R outputs ; e.g. Editable
Vector Graphics, functions for complex tables reporting, reuse of corporate
template document (*.docx and *.pptx). You can use the package as a tool
for fast reporting and as a tool for reporting automation. The package does
not require any installation of Microsoft product to be able to write
Microsoft files (docx and pptx).