Estimating Replication Rate for Genome-Wide Association Studies
Replication Rate (RR) is the probability of replicating a statistically significant association in genome-wide association studies. This R-package provide the estimation method for replication rate which makes use of the summary statistics from the primary study. We can use the estimated RR to determine the sample size of the replication study, and to check the consistency between the results of the primary study and those of the replication study.

Superclasses 'PostgreSQL' connection to help enable full 'dplyr' functionality on 'Redshift'.

Phylogenetic Ridge Regression Methods for Comparative Studies
Pasquale Raia, Silvia Castiglione, Carmela Serio, Alessandro Mondanaro, Marina Melchionna, Mirko Di Febbraro, Antonio Profico, Francesco Carotenuto
Functions for phylogenetic analysis (Castiglione et al, 2017 <doi:10.1111/2041-210X.12954>). The functions perform the estimation of phenotypic evolutionary rates, identification of phenotypic evolutionary rate shifts, quantification of direction and size of evolutionary change in multivariate traits, and the computation of ontogenetic shape vectors.
ape, phytools, geiger, stats4, foreach, doParallel, pvclust,
mvMORPH, lmtest, parallel, phangorn, smatr, rlist, scales,
R.utils

ape, phytools, geiger, stats4, foreach, doParallel, pvclust,
mvMORPH, lmtest, parallel, phangorn, rlist, scales, R.utils,
binr, RColorBrewer, nlme, penalized, smatr, data.tree, car,
outliers, emmeans, picante, vegan, plotrix, cluster, tseries

Functions for phylogenetic analysis (Castiglione et al, 2018 <doi:10.1111/2041-210X.12954>). The functions perform the estimation of phenotypic evolutionary rates, identification of phenotypic evolutionary rate shifts, quantification of direction and size of evolutionary change in multivariate traits, the computation of ontogenetic shape vectors and test for morphological convergence.
ape, phytools, geiger, stats4, foreach, doParallel, pvclust,
mvMORPH, lmtest, parallel, phangorn, rlist, scales, R.utils,
binr, RColorBrewer, nlme, smatr, car, outliers, picante, vegan,
plotrix, cluster, tseries, ddpcr, geomorph