Database interface and MySQL driver for R. This version
complies with the database interface definition as implemented
in the package DBI 0.2-2.

Database interface and MySQL driver for R.  This version
complies with the database interface definition as implemented
in the package DBI 0.2-2.

Log-Linear Poisson Graphical Model with Hot-Deck Multiple
Imputation
c(person("Alyssa", "Imbert", role = c("aut"), email="alyssa.imbert@inra.fr"),
person("Nathalie", "Villa-Vialaneix", role = c("aut", "cre"), email="nathalie.villa-vialaneix@inra.fr"))
Infer log-linear Poisson Graphical Model with an auxiliary data
set. Hot-deck multiple imputation method is used to improve the reliability
of the inference with an auxiliary dataset. Standard log-linear Poisson
graphical model can also be used for the inference and the Stability
Approach for Regularization Selection (StARS) is implemented to drive the
selection of the regularization parameter.
igraph (>= 1.0), hot.deck, PoiClaClu, glmnet
Alyssa Imbert [aut],
Nathalie Villa-Vialaneix [aut, cre]

igraph (>= 1.0), hot.deck, PoiClaClu, glmnet, methods, utils

Infer log-linear Poisson Graphical Model with an auxiliary data
set. Hot-deck multiple imputation method is used to improve the reliability
of the inference with an auxiliary dataset. Standard log-linear Poisson
graphical model can also be used for the inference and the Stability
Approach for Regularization Selection (StARS) is implemented to drive the
selection of the regularization parameter. The method is fully described in
<doi:10.1093/bioinformatics/btx819>.

c(person("Alyssa", "Imbert", role = c("aut"), email="alyssa.imbert@gmail.com"),
person("Nathalie", "Vialaneix", role = c("aut", "cre"), email="nathalie.vialaneix@inrae.fr"))
Alyssa Imbert [aut],
Nathalie Vialaneix [aut, cre]

c(
person("Frederik", "Ziebell", email="frederik.x.ziebell@gsk.com", role = c("aut", "cre"), comment = c(ORCID = "0000-0003-3673-1721")),
person("GlaxoSmithKline Research & Development Limited", role = "cph", comment = "GlaxoSmithKline Research & Development Limited; registered address: 980 Great West Road, Brentford, Middlesex TW8 9GS, United Kingdom")
)
Functions for semi-automated quality control of bulk RNA-seq data.
AnnotationHub, AnnotationFilter, ensembldb, circlize, DESeq2,
SummarizedExperiment, vsn, ComplexHeatmap, matrixStats, grid,
ggpointdensity, ggrepel, gghighlight, ggplot2, cowplot, purrr,
dplyr, stringr, tidyr, tibble, RColorBrewer, tidyselect,
magrittr
Frederik Ziebell [aut, cre] (<https://orcid.org/0000-0003-3673-1721>),
GlaxoSmithKline Research & Development Limited [cph] (GlaxoSmithKline
Research & Development Limited; registered address: 980 Great West
Road, Brentford, Middlesex TW8 9GS, United Kingdom)