Exploratory graphical analysis of multivariate data,
specifically gene expression data with different projection
methods: principal component analysis, correspondence
analysis, spectral map analysis.

Exploratory graphical analysis of multivariate data,
specifically gene expression data with different projection
methods: principal component analysis, correspondence analysis,
spectral map analysis.

'dump.summary.mpm.R' 'Famin81A.R' 'Golub.R' 'mpm.R'
'plot.mpm.R' 'print.mpm.R' 'print.summary.mpm.R'
'summary.mpm.R' 'zzz.R'

'export.summary.mpm.R' 'Famin81A.R' 'Golub.R' 'mpm.R'
'plot.mpm.R' 'print.mpm.R' 'print.summary.mpm.R'
'summary.mpm.R' 'zzz.R'

c(
person(given = "Luc", family = "Wouters", role = "aut",
email = "wouters_luc@telenet.be"),
person(given = "Tobias", family = "Verbeke", role = "ctb",
email = "tobias.verbeke@openanalytics.eu"),
person(given = "Laure", family = "Cougnaud", role = "cre",
email = "laure.cougnaud@openanalytics.eu")
)
Luc Wouters [aut],
Tobias Verbeke [ctb],
Laure Cougnaud [cre]

Functions to compute and plot multivariate (partial)
Mantel correlograms.

subvention 099/RN08/02.1 of the Spanish Ministerio de
Medio Ambiente, Medio Rural y Marino.

Functions to compute and plot multivariate (partial) Mantel correlograms.

Uses a kernel smoothing approach to calculate Mutual Information
for comparisons between all types of variables including continuous vs
continuous, continuous vs discrete and discrete vs discrete. Uses a
nonparametric bias correction giving Bias Corrected Mutual Information
(BCMI). Implemented efficiently in Fortran 95 with OpenMP and suited to
large genomic datasets.

Symbolic computation and more with multivariate polynomials
mpoly allows for the symbolic manipulation of multivariate
polynomials in a general and consistent way designed especially
for sparse and super sparse polynomials.  It also allows for
basic differential calculus with multivariate polynomials and
Grobner basis calculations from computational algebraic
geometry.
stringr, rSymPy, rJython, rJava, rjson, partitions, plyr
'as.function.mpoly.R' 'as.function.mpolyList.R'
'deriv.mpoly.R' 'grobner.R' 'is.mpoly.R' 'is.mpolyList.R'
'is.wholenumber.R' 'LCM.R' 'mp.R' 'mpoly.R' 'mpolyAdd.R'
'mpolyEqual.R' 'mpolyExp.R' 'mpolyList.R' 'mpolyListAdd.R'
'mpolyListProd.R' 'mpolyProd.R' 'print.mpoly.R'
'print.mpolyList.R' 'reorder.mpoly.R' 'terms.mpoly.R' 'vars.R'
'help.R' 'permutations.R' 'tuples.R' 'partitions.R' 'burst.R'