Implementation of the DEMI method for the analysis of high-density microarray data.
R.utils, affxparser, affy, oligo, plyr, methods, devtools

R (>= 2.15), methods, affy, affxparser, R.utils, utils, oligo

Deming, Thiel-Sen and Passing-Bablock Regression
Generalized Deming regression, Theil-Sen regression and Passing-Bablock regression functions.

Deming, Theil-Sen, Passing-Bablock and Total Least Squares
Regression

Providing Demographic Table with the P-Value, Standardized Mean
Difference Value
person(given = "Loan",
family = "Robinson",
role = c("aut", "cre"),
email = "loankimrobinson@gmail.com")
The Demographic Table in R combines contingency table for categorical variables, mean and standard deviation for continuous variables. t-test, chi-square test and Fisher's exact test calculated the p-value of two groups. The standardized mean difference were performed with 95 % confident interval, and writing table into document file.

Kernel Density Estimation for Demonstration Purposes
Demonstration code showing how (univariate) kernel
density estimates are computed, at least conceptually,
and allowing users to experiment with different kernels,
should they so wish.  NOTE: the density function in the
stats package should be used for computational efficiency.

Demonstration code showing how (univariate) kernel
density estimates are computed, at least conceptually,
and allowing users to experiment with different kernels,
should they so wish.  The method used follows directly
the definition, but gains efficiency by replacing the
observations by frequencies in a very fine grid covering
the sample range.  A canonical reference is
B. W. Silverman, (1998) <doi: 10.1201/9781315140919>.
NOTE: the density function in the
stats package uses a more sophisticated method based on the
fast Fourier transform and that function should be used if
computational efficiency is a prime consideration.

Runs a 'Shiny' App as Demo or Lists All Demo 'Shiny' Apps
Mimics the demo functionality for 'Shiny' apps in a package. Apps stored to the package subdirectory inst/shiny can be called by demoShiny(topic).