Standardized Climate Indices such as SPI, SRI or SPEI
Functions for generating Standardized Climate Indices (SCI).
SCI is a transformation of (smoothed) climate (or environmental)
time series that  removes seasonality and forces the data to
take values of the standard normal distribution. SCI was
originally developed for precipitation. In this case it is
known as the Standardized Precipitation Index (SPI).

Standardized Climate Indices Such as SPI, SRI or SPEI

Single-Cell Integrator and Batch Effect Remover
c(person(given = "Dailin", family = "Gan", role = c("aut", "cre"), email = "dgan@nd.edu", comment = c(ORCID = "0000-0003-0535-1259")), person(given = "Jun", family = "Li", role = "aut"))
Remove batch effects by projecting query batches into the reference batch space.
Dailin Gan [aut, cre] (<https://orcid.org/0000-0003-0535-1259>),
Jun Li [aut]

knitr, rmarkdown, testthat (>= 3.0.0), cowplot, ggplot2,
ggthemes, Matrix, uwot

A Semi-Supervised Category Identification and Assignment Tool
An automatic cell type detection and assignment algorithm for single cell RNA-Seq and Cytof/FACS data. 'SCINA' is capable of assigning cell type identities to a pool of cells profiled by scRNA-Seq or Cytof/FACS data with prior knowledge of markers, such as genes and protein symbols that are highly or lowly expressed in each category.

An automatic cell type detection and assignment algorithm for single cell RNA-Seq and Cytof/FACS data. 'SCINA' is capable of assigning cell type identities to a pool of cells profiled by scRNA-Seq or Cytof/FACS data with prior knowledge of markers, such as genes and protein symbols that are highly or lowly expressed in each category. See Zhang Z, et al (2019) <doi:10.3390/genes10070531> for more details.

A package for probability combining (additive and
multiplicative method) and for calculating some effect size
measures on single-case data (SMD, PND and PEM).

An R package for single-case meta-analysis.

Perform meta-analysis of single-case experiments, including calculating various effect size measures (SMD, PND, PEM and NAP) and probability combining (additive and multiplicative method).