An efficient and flexible system to solve sparse mixed model
equations, for models that are often used in statistical genetics.
Important applications are the use of splines to model spatial or temporal
trends. Another application area is mixed model QTL analysis for
multiparental populations, allowing for heterogeneous residual variance and
random design matrices with Identity-By-Descent (IBD) probabilities.
c(person(given = "Martin",
family = "Boer",
email = "martin.boer@wur.nl",
role = "aut",
comment = c(ORCID = "0000-0002-1879-4588")),
person(given = "Bart-Jan",
family = "van Rossum",
email = "bart-jan.vanrossum@wur.nl",
role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-8673-2514")))
agridat, ggplot2, maps, Matrix, methods, Rcpp (>= 0.10.4), sp,
spam, splines

Repeated Measurement Models for Discrete Times
c(
person("Brice", "Ozenne", role = c("aut", "cre"), email = "brice.mh.ozenne@gmail.com", comment = c(ORCID = "0000-0001-9694-2956")),
person("Julie", "Forman", role = "aut", email = "jufo@sund.ku.dk", comment = c(ORCID = "0000-0001-7368-0869"))
)
Companion R package for the course "Statistical analysis
of correlated and repeated measurements for health science
researchers" taught by the section of Biostatistics of the University
of Copenhagen. It provides functions for computing summary statistics
and obtaining graphical displays of longitudinal data, as well as for
statistical modeling and statistical inference using linear mixed model.
emmeans, lava, Matrix, multcomp, numDeriv, reshape2, sandwich
AICcmodavg, data.table, nlmeU, optimx, Publish, qqtest,
R.rsp, testthat
'0-onload.R' 'LMMstar-package.R' 'LMMstar.options.R' 'anova.R'
'autoplot.R' 'baselineAdjustment.R' 'coef.R' 'confint.R' 'df.R'
'doc-data.R' 'emmeans.R' 'estimate.R' 'fitted.R' 'formula.R'
'getCoef.R' 'getVarCov.R' 'iid.R' 'information.R' 'lmm.R'
'logLik.R' 'model.frame.R' 'model.matrix.R' 'moments.R'
'multcomp.R' 'nobs.R' 'precompute.R' 'predict.R' 'print.R'
'reparametrize.R' 'residuals.R' 'sampleRem.R' 'score.R'
'structure-calc_Omega.R' 'structure-calc_d2Omega.R'
'structure-calc_dOmega.R' 'structure-initialization.R'
'structure-skeleton.R' 'structure.R' 'summarize.R' 'summary.R'
'utils.R' 'vcov.R'