Streamlining Design and Deployment of Complex Workflows
This framework allows you to design and implement complex
pipelines, and deploy them on your institution's computing cluster. This has
been built keeping in mind the needs of bioinformatics workflows. However, it is
easily extendable to any field where a series of steps (shell commands) are to
be executed in a (work)flow.
R (>= 3.0.2), methods, params (>= 0.3), utils
reshape2, knitr, ggplot2, openxlsx, testthat, funr
c(person("Sahil", "Seth", role = c("aut", "cre"), email = "me@sahilseth.com"))

R (>= 3.3), methods, params (>= 0.7), utils
reshape2, knitr, testthat, funr, rmarkdown

An interface to streamline design of complex workflows and their deployment to a High Performance Computing Cluster.

diagram, whisker, params (>= 0.2.4), tools, knitr
c(
person("Sahil", "Seth",
role = c("aut", "cre"),
email = "me@sahilseth.com"))

This framework allows you to design and implement complex pipelines, and
deploy them on your institution's computing cluster. This has been built
keeping in mind the needs of bioinformatics workflows. However, it is
easily extendable to any field where a series of steps (shell commands)
are to be executed in a (work)flow.

c(
person("Timothée", "Giraud", email = "timothee.giraud@ums-riate.fr", role = c("cre","aut")),
person("Laurent", "Beauguitte", email = "laurent.beauguitte@univ-rouen.fr", role = c("aut")),
person("Marianne", "Guérois", email = "guerois@parisgeo.cnrs.fr", role = c("ctb")))
Selections on flow matrices, statistics on selected flows, map and graph visualisations.
Timothée Giraud [cre, aut],
Laurent Beauguitte [aut],
Marianne Guérois [ctb]

Selections on flow matrices, statistics on selected flows, map and
graph visualisations.

Path algorithm for the general Fused Lasso Signal Approximator
This package implements a path algorithm for the Fused
Lasso Signal Approximator. For more details see the help files

Path Algorithm for the General Fused Lasso Signal Approximator
Implements a path algorithm for the Fused Lasso Signal Approximator.
For more details see the help files or the article by Hoefling (2009) <arXiv:0910.0526>.