abind, ade4, boot, data.table, foreach, ggplot2, Hmisc,
methods, oro.nifti, parallel, plyr, scales

abind, ade4, boot, data.table, foreach, ggplot2, Hmisc,
methods, oro.nifti, permute, parallel, plyr, RcppEigen, scales

A set of tools for performing graph theory analysis of brain MRI
data. It is best suited to data from a Freesurfer analysis (cortical
thickness, volumes, local gyrification index, surface area), but also works
with e.g., tractography data from FSL and fMRI data from DPABI. It contains
a graphical user interface for graph visualization and data exploration and
several functions for generating useful figures.

A set of tools for performing graph theory analysis of brain MRI
data. It works with data from a Freesurfer analysis (cortical thickness,
volumes, local gyrification index, surface area), diffusion tensor
tractography data (e.g., from FSL) and resting-state fMRI data (e.g., from
DPABI). It contains a graphical user interface for graph visualization and
data exploration, along with several functions for generating useful
figures.
abind, ade4, boot, data.table, expm, foreach, ggplot2,
ggrepel, gridExtra, Hmisc, MASS, Matrix, mediation, methods,
oro.nifti, permute, parallel, RcppEigen, scales

person(given="Christopher G.", family="Watson",
email="cgwatson@bu.edu", role=c("aut", "cre"),
comment=c(ORCID="0000-0002-7082-7631"))
abind, data.table, doParallel, foreach, ggplot2, ggrepel,
grid, MASS, Matrix, methods, permute, parallel, RcppEigen
Hmisc, RGtk2, ade4, boot, cairoDevice, expm, gridExtra,
mediation, oro.nifti, scales
Christopher G. Watson [aut, cre]
(<https://orcid.org/0000-0002-7082-7631>)

abind, ade4, boot, data.table, expm, foreach, ggplot2,
ggrepel, gridExtra, Hmisc, MASS, Matrix, methods, oro.nifti,
permute, parallel, RcppEigen, scales

abind, data.table (>= 1.12.4), doParallel, foreach, grid,
lattice, MASS, Matrix, methods, permute, parallel
Hmisc, RGtk2, ade4, boot, cairoDevice, car, expm, ggplot2,
ggrepel, gridExtra, mediation, oro.nifti, scales
'glm_stats.R' 'brainGraph_GLM.R' 'glm_methods.R' 'NBS.R'
'analysis_random_graphs.R' 'atlas.R' 'auc.R' 'boot_global.R'
'brainGraph_mediate.R' 'centr_lev.R' 'communicability.R'
'contract_brainGraph.R' 'corr_matrix.R' 'count_edges.R'
'create_graphs.R' 'create_mats.R' 'data.R' 'data_tables.R'
'distances.R' 'edge_asymmetry.R' 'get_resid.R' 'glm_design.R'
'glm_fit.R' 'glm_randomise.R' 'graph_efficiency.R' 'hubs.R'
'import.R' 'individ_contrib.R' 'list.R' 'method_helpers.R'
'mtpc.R' 'methods.R' 'permute_group.R' 'plot_brainGraph.R'
'plot_brainGraph_gui.R' 'plot_brainGraph_multi.R'
'plot_global.R' 'plot_group_means.R' 'plot_rich_norm.R'
'plot_vertex_measures.R' 'random_graphs.R' 'rich_club.R'
'robustness.R' 's_core.R' 'set_brainGraph_attributes.R'
'small_world.R' 'spatial_dist.R' 'update_brainGraph_gui.R'
'utils.R' 'utils_matrix.R' 'vertex_roles.R' 'vulnerability.R'
'write_brainnet.R' 'zzz.R'