c(person("Shaun", "Wilkinson", role = c("aut", "cre"),
email = "shaunpwilkinson@gmail.com",
comment = c(ORCID = '0000-0002-7332-7931')),
person("Simon", "Davy", role = "aut",
email = "simon.davy@vuw.ac.nz",
comment = c(ORCID = '0000-0003-3584-5356'))
)
Contains functions for developing phylogenetic trees as
deeply-nested lists ("dendrogram" objects).
Enables bi-directional conversion between dendrogram and
"phylo" objects
(see Paradis et al (2004) <doi:10.1093/bioinformatics/btg412>),
and features several tools for command-line tree
manipulation and import/export via Newick parenthetic text.

Modelling Competitive Exclusion and Limited Dispersal in a
Statistical Phylogeographic Framework
This package implements a model of space colonization mapped on a phylogeny, it aims at estimating limited dispersal and competitive exclusion in a statistical phylogeographic framework. (see phyloland-package for details.)

Phyloland package models a space colonization process mapped onto a phylogeny, it aims at estimating limited dispersal and ecological competitive exclusion in a Bayesian MCMC statistical phylogeographic framework (please refer to phyloland-package help for details.)

phylolm package provides a function for fitting
phylogenetic linear regression models. The likelihood is
calculated with an algorithm that is linear in the number of
tips in the tree. The package also provides a function for
simulating continuous traits along the tree.

the phylolm package provides a function for fitting phylogenetic linear regression models and phylogenetic logistic regression. The computation uses an algorithm that is linear in the number of tips in the tree. The package also provides a function for simulating continuous or binary traits along the tree.

Lam Si Tung Ho, Cecile Ane, Robert Lachlan
the phylolm package provides functions for fitting phylogenetic linear regression models and phylogenetic logistic regression. The computation uses an algorithm that is linear in the number of tips in the tree. The package also provides functions for simulating continuous or binary traits along the tree.