Weighted Gene Co-Expression Network Analysis
Peter Langfelder <Peter.Langfelder@gmail.com> and Steve Horvath
<SHorvath@mednet.ucla.edu>
R (>= 2.3.0), stats, impute, grDevices, dynamicTreeCut (>=
1.20), utils, flashClust, qvalue, Hmisc, splines
Functions necessary to perform Weighted Gene Co-Expression
Network Analysis

Peter Langfelder <Peter.Langfelder@gmail.com> and Steve Horvath
<SHorvath@mednet.ucla.edu> with contributions by Jun Dong,
Jeremy Miller, Lin Song, Andy Yip, and Bin Zhang
GO.db, org.Hs.eg.db, org.Mm.eg.db, AnnotationDbi, infotheo,
entropy, minet

R (>= 2.3.0), stats, impute, grDevices, dynamicTreeCut (>=
1.20), utils, flashClust, Hmisc, splines, cluster
GO.db, org.Hs.eg.db, org.Mm.eg.db, AnnotationDbi, infotheo,
entropy, minet, survival

Peter Langfelder <Peter.Langfelder@gmail.com> and Steve Horvath <SHorvath@mednet.ucla.edu> with contributions by Jun Dong, Jeremy Miller, Lin Song, Andy Yip, and Bin Zhang
R (>= 2.10.0), stats, impute, grDevices, dynamicTreeCut (>=
1.20), utils, flashClust, Hmisc, splines, cluster, reshape
Functions necessary to perform Weighted Gene Co-Expression Network Analysis

Peter Langfelder <Peter.Langfelder@gmail.com> and Steve Horvath <SHorvath@mednet.ucla.edu> with contributions by Chaochao Cai, Jun Dong, Jeremy Miller, Lin Song, Andy Yip, and Bin Zhang
R (>= 2.10), stats, impute, grDevices, dynamicTreeCut (>=
1.20), utils, flashClust, Hmisc, splines, cluster, reshape
Functions necessary to perform Weighted Correlation Network Analysis

Peter Langfelder <Peter.Langfelder@gmail.com> and Steve Horvath
<SHorvath@mednet.ucla.edu> with contributions by Chaochao Cai,
Jun Dong, Jeremy Miller, Lin Song, Andy Yip, and Bin Zhang
Functions necessary to perform Weighted Correlation
Network Analysis

R (>= 2.10), stats, impute, grDevices, dynamicTreeCut (>=
1.20), utils, flashClust, Hmisc, splines, cluster, reshape,
MASS

R (>= 2.14), stats, impute, grDevices, dynamicTreeCut (>=
1.20), utils, flashClust, Hmisc, splines, cluster, reshape,
MASS, foreach, doParallel