graphics, stats, rgl, ape, scatterplot3d, grDevices

A collection of functions useful for the analysis of
building physics experiments.

Methods for Closed Testing with Simes Inequality, in Particular
Hommel's Method
Jelle Goeman, Rosa Meijer, Thijmen Krebs
Provides methods for closed testing using Simes local tests. In particular, calculates adjusted p-values for Hommel's multiple testing method, and provides lower confidence bounds for true discovery proportions. A robust but more conservative variant of the closed testing procedure that does not require the assumption of Simes inequality is also implemented.

Provides methods for closed testing using Simes local tests. In particular, calculates adjusted p-values for Hommel's multiple testing method, and provides lower confidence bounds for true discovery proportions. A robust but more conservative variant of the closed testing procedure that does not require the assumption of Simes inequality is also implemented. The methods have been described in detail in Meijer et al (2016) <arXiv:1611.06739>.

Provides methods for closed testing using Simes local tests. In particular, calculates adjusted p-values for Hommel's multiple testing method, and provides lower confidence bounds for true discovery proportions. A robust but more conservative variant of the closed testing procedure that does not require the assumption of Simes inequality is also implemented. The methods have been described in detail in Goeman et al (2016) <arXiv:1611.06739v2>.

c(
person("Ogan", "Mancarci", email = "ogan.mancarci@gmail.com", role = c("aut", "cre")),
person("Leon","French", role = c('ctb')))
A wrapper for the homologene database by the National Center for
Biotechnology Information ('NCBI'). It allows searching for gene homologs across
species. Data in this package can be found at <ftp://ftp.ncbi.nih.gov/pub/HomoloGene/build68/>.
Ogan Mancarci [aut, cre],
Leon French [ctb]

Quick Access to Homologene and Gene Annotation Updates
A wrapper for the homologene database by the National Center for
Biotechnology Information ('NCBI'). It allows searching for gene homologs across
species. Data in this package can be found at <ftp://ftp.ncbi.nih.gov/pub/HomoloGene/build68/>.
The package also includes an updated version of the homologene database where
gene identifiers and symbols are replaced with their latest (at the time of
submission) version and functions to fetch latest annotation data to keep updated.