Integrates the information from multiple linkage maps to
create a consensus directed graph, which is then linearized to
produce a consensus map.

Reverse and model the effects of changing deposition rates on geological data and rates. Based on Hohmann (2018) <doi:10.13140/RG.2.2.23372.51841> .

Dynamical Assembly of Islands by Speciation, Immigration and
Extinction
Rampal S. Etienne, Luis M. Valente & Albert B. Phillimore
Simulates and computes the (maximum) likelihood of a dynamical model of island biota assembly through speciation, immigration and extinction. See Valente et al. 2015. Ecology Letters. In press.

deSolve, grDevices, graphics, stats, utils
Rampal S. Etienne, Luis M. Valente, Albert B. Phillimore & Bart Haegenan
Simulates and computes the (maximum) likelihood of a dynamical model of island biota assembly through speciation, immigration and extinction. See Valente et al. 2015. Ecology Letters 18: 844-852.

deSolve, grDevices, graphics, stats, utils, DDD (> 3.0),
subplex
Rampal S. Etienne, Luis M. Valente, Albert B. Phillimore & Bart Haegeman
Simulates and computes the (maximum) likelihood of a dynamical model of island biota assembly through speciation, immigration and extinction. See Valente et al. 2015. Ecology Letters 18: 844-852, <DOI:10.1111/ele.12461>.

deSolve, grDevices, graphics, stats, utils, DDD (> 3.0),
subplex, Matrix, tensor

deSolve, graphics, stats, utils, DDD (>= 4.4), subplex,
Matrix, tensor, pracma, testit, foreach, doParallel, magrittr,
parallel
covr, testthat (>= 2.1.0), knitr, rmarkdown, gridExtra,
dplyr, ggplot2, ggtree, tidytree, tidyr, purrr, ape, phytools,
tibble
c(
person(given = "Rampal S.",
family = "Etienne",
email = "r.s.etienne@rug.nl",
role = c("aut", "cre"),
comment = c(ORCID = "0000-0003-2142-7612")),
person(given = "Luis",
family = "Valente",
email = "luis.valente@naturalis.nl",
role = c("aut"),
comment = c(ORCID = "0000-0003-4247-8785")),
person(given = "Albert B.",
family = "Phillimore",
role = c("aut"),
comment = c(ORCID = "0000-0002-6553-1553")),
person(given = "Bart",
family = "Haegeman",
role = c("aut"),
comment = c(ORCID = "0000-0003-2325-4727")),
person(given = "Joshua",
family = "Lambert",
role = c("aut"),
email = "j.w.l.lambert@rug.nl"),
person(given = "Pedro",
family = "Neves",
role = c("aut"),
email = "p.m.santos.neves@rug.nl",
comment = c(ORCID = "0000-0003-2561-4677")),
person(given = "Shu",
family = "Xie",
role = c("aut"),
email = "s.xie@rug.nl"),
person(given = "Richèl J.C.",
family = "Bilderbeek",
email = "richel@richelbilderbeek.nl",
role = c("aut"),
comment = c(ORCID = "0000-0003-1107-7049")),
person(given = "Torsten",
family = "Hauffe",
email = "torsten.hauffe@gmail.com",
role = c("ctb"),
comment = c(ORCID = "0000-0001-5711-9457")),
person(given = "Giovanni",
family = "Laudanno",
email = "glaudanno@gmail.com",
role = c("ctb")),
person(given = "Nadiah",
family = "Kristensen",
email = "nadiah@nadiah.org",
role = c("ctb")),
person(given = "Raphael",
family = "Scherrer",
email = "r.scherrer@rug.nl",
role = c("ctb")))
Simulates and computes the (maximum) likelihood of a dynamical model of island biota assembly through speciation, immigration and extinction. See e.g. Valente et al. 2015. Ecology Letters 18: 844-852, <DOI:10.1111/ele.12461>.
Rampal S. Etienne [aut, cre] (<https://orcid.org/0000-0003-2142-7612>),
Luis Valente [aut] (<https://orcid.org/0000-0003-4247-8785>),
Albert B. Phillimore [aut] (<https://orcid.org/0000-0002-6553-1553>),
Bart Haegeman [aut] (<https://orcid.org/0000-0003-2325-4727>),
Joshua Lambert [aut],
Pedro Neves [aut] (<https://orcid.org/0000-0003-2561-4677>),
Shu Xie [aut],
Richèl J.C. Bilderbeek [aut] (<https://orcid.org/0000-0003-1107-7049>),
Torsten Hauffe [ctb] (<https://orcid.org/0000-0001-5711-9457>),
Giovanni Laudanno [ctb],
Nadiah Kristensen [ctb],
Raphael Scherrer [ctb]