Giovanni Petris <GPetris@uark.edu>.  Original C code for ARMS
by Wally Gilks.

Giovanni Petris <GPetris@uark.edu>.
Original C code for ARMS by Wally Gilks.

stats, utils, methods, grDevices, graphics
c(
person("Giovanni", "Petris", email = "GPetris@uark.edu", role = c("aut", "cre")),
person("Wally", "Gilks", role = "ctb", comment = "Author of original C code for ARMS"))
Provides routines for Maximum likelihood,
Kalman filtering and smoothing, and Bayesian
analysis of Normal linear State Space models, also known as
Dynamic Linear Models.
Giovanni Petris [aut, cre],
Wally Gilks [ctb] (Author of original C code for ARMS)

QTL mapping in a mixed model framework with separate
detection and localization stages. The first stage detects the
number of QTL on each chromosome based on the genetic variation
due to grouped markers on the chromosome; the second stage uses
this information to determine the most likely QTL positions.
The mixed model can accommodate general fixed and random
effects, including spatial effects in field trials and pedigree
effects. Applicable to backcrosses, doubled haploids,
recombinant inbred lines, F2 intercrosses, and association
mapping populations.

'calc.genoprob2.R' 'calcpos.R' 'cintern.R' 'dlcross.cross.R'
'dlcross.dlmap.R' 'dlcross.other.R' 'dlcross.R' 'dldetect.R'
'dllocalize.R' 'dlmap.R' 'dlmapdet.R' 'dlmaploc.R' 'dltest.R'
'ngen.dlcross.R' 'ngen.dlmap.R' 'ngen.R' 'nmrk.dlcross.R'
'nmrk.dlmap.R' 'nmrk.R' 'nphen.dlcross.R' 'nphen.dlmap.R'
'nphen.R' 'plot.dlcross.R' 'plot.dlmap.R' 'print.dlcross.R'
'print.dlmap.R' 'profileplot.dlmap.R' 'profileplot.R' 'pvfx.R'
'qchibar.R' 'summary.dlcross.R' 'summary.dlmap.R'
'waldtest.asreml.R' 'waldtest.R'

dlmodeler is a set of user friendly functions to simplify
the state-space modelling, fitting, analysis and forecasting of
Generalized Dynamic Linear Models (DLMs). It includes functions
to name and extract individual components of a DLM, and
provides a unified interface compatible with other state-space
packages including: KFAS, FKF and dlm.