Carl Scarrott, Yang Hu and Alfadino Akbar, University of Canterbury
stats, graphics, MASS, splines, gsl, SparseM, grDevices
The usual distribution functions, maximum likelihood inference and
model diagnostics for univariate stationary extreme value mixture models
are provided. Kernel density estimation including various boundary
corrected kernel density estimation methods and a wide choice of kernels,
with cross-validation likelihood based bandwidth estimator.
Reasonable consistency with the base functions in the 'evd' package is
provided, so that users can safely interchange most code.

Carl Scarrott and Yang Hu, University of Canterbury

stats, graphics, MASS, splines, gsl, SparseM

evobiR is a collection of tools for use in evolutionary biology

Comparative and Population Genetic Analyses
Comparative analysis of continuous traits influencing discrete states, and utility tools to facilitate comparative analyses.  Implementations of ABBA/BABA type statistics to test for introgression in genomic data. Wright-Fisher, phylogenetic tree, and statistical distribution Shiny interactive simulations for use in teaching.

Tools for Evolutionary Quantitative Genetics
Ana Paula Assis, Diogo Melo, Edgar Zanella, Fabio Machado, Guilherme Garcia
Provides functions for covariance matrix comparisons, estimation of repeatabilities in measurements and matrices, and general evolutionary quantitative genetics tools.
Rcpp, reshape2, ggplot2, magrittr, tidyr, vegan, ape,
phytools, mvtnorm
testthat (>= 0.2), foreach, grid, gridExtra, doParallel

Rcpp (>= 0.11), reshape2, ggplot2, magrittr, tidyr, vegan,
ape, phytools, mvtnorm

Rcpp (>= 0.11), Matrix, reshape2, ggplot2, magrittr, tidyr,
vegan, ape, phytools, mvtnorm, graphics, grDevices, methods,
stats, utils

Ana Paula Assis, Diogo Melo, Edgar Zanella, Fabio Machado, Guilherme
Garcia
Provides functions for covariance matrix comparisons, estimation
of repeatabilities in measurements and matrices, and general evolutionary
quantitative genetics tools.
Rcpp (>= 0.11), Matrix, reshape2, ggplot2, magrittr, tidyr,
vegan, ape, phytools, mvtnorm, graphics, grDevices, methods,
stats, depth, utils