Title: A Fast Parameter Estimation Method for Evolutionary Biology
Depends: R (>= 2.14.2), methods, foreach (>= 1.2.0-1), phyclust (>=

Description: Jaatha is a composite likelihood method for inferring evolutionary
parameters using genetic data. Given a model of the evolutionary history of
two biological populations as well as SNP data from multiple individuals
from each population, it estimates model parameters like the time of

Imports: foreach (>= 1.2.0-1), phyclust (>= 0.1-14), parallel

Collate: 'Block.R' 'sim_program.R' 'DemographicModel.R' 'Jaatha.R'

Author: Paul R. Staab, Lisha Mathew and Dirk Metzler

Authors@R: c( person('Paul', 'Staab', , 'develop@paulstaab.de', role=c('aut',
'cre', 'cph')), person('Lisha', 'Mathew', role=c('aut', 'cph')),
person('Dirk', 'Metzler', role=c('aut', 'cph', 'ths')) )

Title: Simulation-Based Maximum Likelihood Parameter Estimation
person('Dirk', 'Metzler', role=c('aut', 'ths')) )
Description: An estimation method that can use computer simulations to
approximate maximum-likelihood estimates even when the likelihood function can not
be evaluated directly. It can be applied whenever it is feasible to conduct many
simulations, but works best when the data is approximately Poisson distributed.
It was originally designed for demographic inference in evolutionary
biology. It has optional support for conducting coalescent simulation using
Imports: assertthat (>= 0.1), R6 (>= 2.1.1), parallel, stats, utils
Suggests: boot (>= 1.3-10), coala (>= 0.2.1), knitr, rmarkdown,

person('Dirk', 'Metzler', ,'metzler@bio.lmu.de', role=c('aut', 'ths', 'cre')) )
It has optional support for conducting coalescent simulation using

Title: Possible Adverse Events/Reactions from the
Suggests: tm, stringi, bracer, mgsub, qdapRegex, stringr, data.table,
xmlconvert, jsonlite, anytime, cffr, rbibutils
Description: Provides data about the possible adverse events/reactions
resulting from being injected with a vaccine/experimental gene therapy.
Currently, the data is only from three reference sources. Refer to the
Citation file for the reference information.
For information about vaccination$/immunization$ hazards, visit