Depends: R (>= 3.0.0), plotrix, shiny, ggplot2

Title: diveRsity: Genetic diversity partition statistics and
Informative locus selection using Fst, Gst, Dest(Jost Chao)
Depends: R (>= 3.0.0), plotrix, shiny, ggplot2, qgraph

Package: diveRsity
Version: 1.7.6
Date: 2014/01/20
Title: diveRsity: Genetic diversity partition statistics and
Informative locus selection using Fst, Gst, Dest(Jost Chao)
G'st and In.
Author: Kevin Keenan <kkeenan02@qub.ac.uk>
Maintainer: Kevin Keenan <kkeenan02@qub.ac.uk>
Description: diveRsity is a package which allows the calculation of both genetic
diversity partition statistics, genetic differentiation statistics and locus
informativeness for ancestry assignment. It also provides users with various
option to calculate bootstrapped 95% confidence intervals both across loci,
for pairwise population comparisons and to plot these results interactively.
V1.2 and up provides parallel computing capabilities and pairwise results
without bootstrapping. Weir and Cockerham's 1984 F-statistics are now also
calculated. Various plotting features are also provided. Chi-square tests of
genetic heterogeneity are also provided. Functionality for the calculation
of various diversity parameters is also possible for RAD-seq derived SNP
data sets containing thousands of marker loci. A shiny application for the
development of microsatellite multiplexes is also available
Suggests: xlsx, sendplot, foreach, iterators, doParallel, parallel
Depends: R (>= 3.0.0)
Imports: ggplot2, shiny, qgraph, plotrix
Repository: CRAN
License: GPL (>= 2)
URL: http://diversityinlife.weebly.com/
Packaged: 2014-01-22 17:30:09 UTC; Kevin
NeedsCompilation: no
Date/Publication: 2014-01-22 21:02:41

Suggests: xlsx, sendplot, plotrix, foreach, iterators, doParallel,

Package: diveRsity
Version: 1.9.73
Date: 2014/12/19
Title: A Comprehensive, General Purpose Population Genetics Analysis
Package
Author: Kevin Keenan <kkeenan02@qub.ac.uk>
Maintainer: Kevin Keenan <kkeenan02@qub.ac.uk>
Description: Allows the calculation of both genetic diversity partition
statistics,genetic differentiation statistics and locus
informativeness for ancestry assignment. It also provides users
with various option to calculate bootstrapped 95% confidence
intervals both across loci, for pairwise population comparisons
and to plot these results interactively. V1.2 and up provides
parallel computing capabilities and pairwise results without
bootstrapping. Weir and Cockerham's 1984 F-statistics are now
also calculated. Various plotting features are also provided.
Chi-square tests of genetic heterogeneity are also provided.
Functionality for the calculation of various diversity
parameters is also possible for RAD-seq derived SNP data sets
containing thousands of marker loci. A shiny application for
the development of microsatellite multiplexes is also available
Suggests: xlsx, sendplot, plotrix, parallel
Depends: R (>= 3.0.0)
Imports: ggplot2, shiny, qgraph, Rcpp, grid
LinkingTo: Rcpp
Repository: CRAN
License: GPL (>= 2)
URL: https://github.com/kkeenan02/diveRsity
Packaged: 2014-12-22 15:50:40 UTC; Kevin
NeedsCompilation: yes
Date/Publication: 2014-12-22 18:11:12