Description: Computation of the Pedroni (1999) panel cointegration test statistics.  Reported are the empirical and the standardized values.

Title: Penalized Cox Proportional Hazard Model for Time-Dependent
Description: Fits penalized models for both time-independent and time-dependent survival data. It fully implements elastic net and uses proximal gradient descent to solve the optimization problem. The package is an implementation of Steve Cygu and Benjamin M. Bolker. (2021) <arXiv:2102.02297>.
Imports: Rcpp (>= 1.0.5), survival, doParallel, parallel, foreach,
ggplot2, prodlim, riskRegression, PermAlgo, pec
Author: Bicko Cygu [aut, cre] (<https://orcid.org/0000-0002-9284-8863>),

comment = "getmin function implementation copied from package glmnet"))
Trevor Hastie [cph] (getmin function implementation copied from package

Title: Analyzing Real-Time Quantitative PCR Data
Description: Calculates the amplification efficiency and curves from real-time
quantitative PCR (Polymerase Chain Reaction) data. Estimates the relative
expression from PCR data using the double delta CT and the standard curve
methods Livak & Schmittgen (2001) <doi:10.1006/meth.2001.1262>. Tests for
statistical significance using two-group tests and linear regression
Imports: devtools, magrittr, dplyr, tidyr, purrr, readr, ggplot2, broom
Suggests: testthat, knitr, rmarkdown, covr, cowplot
Packaged: 2017-11-03 01:12:43 UTC; MahShaaban

Packaged: 2017-11-03 10:29:31 UTC; MahShaaban

Packaged: 2017-11-20 12:43:49 UTC; ma7moud_sha3ban

Imports: devtools, magrittr, dplyr, tidyr, purrr, readr, ggplot2

Title: A package implementing the coalescent approach to PCR simulation
developed by Weiss and von Haeseler (NAR, 1997).

Title: Implementing the Coalescent Approach to PCR Simulation Developed
Description: Implementing the Coalescent Approach to PCR Simulation.

Title: Simulation of the forensic DNA process
Imports: ggplot2, data.table, gWidgets, RGtk2, strvalidator
Suggests: ggplot2, data.table, gWidgets, RGtk2, strvalidator, testthat
Description: pcrsim is a package for simulating the forensic DNA
process. pcrsim() opens up a graphical user interface which
allow the user to enter parameters required for the simulation.
Once calibrated the program can be used to: reduce the
laboratory work needed for validation of new STR kits, help
develop methods for interpretation of DNA evidence, etc.  This
is a first version which is still experimental and under