Description: Estimates the Joint Sentiment Topic model and its reversed variety,
as described by Lin and He, 2009 <DOI:10.1145/1645953.1646003> and Lin, He, Everson and Ruger
Imports: magrittr, quanteda, reshape2, Rcpp (>= 0.12.12), RcppProgress,
Collate: 'RcppExports.R' 'dictionary.R' 'topNwords.R' 'jst_reversed.R'

Imports: magrittr, quanteda, reshape2, Rcpp, RcppProgress, SnowballC

Description: Low-level interface to Java VM very much like .C/.Call and friends. Allows creation of objects, calling methods and accessing fields.
Packaged: Mon Dec  5 12:39:01 2005; hornik

Packaged: Tue Jan 31 08:51:29 2006; hornik

Packaged: Tue Apr 18 21:24:30 2006; hornik

Description: Low-level interface to Java VM very much like .C/.Call and
friends. Allows creation of objects, calling methods and

Description: Support for e.g. interfaces

Author: G. Grothendieck and Carlos J. Gil Bellosta (authors of Jython
itself are Jim Hugunin, Barry Warsaw, Samuele Pedroni, Brian
Zimmer, Frank Wierzbicki and others; Bob Ippolito is the author
Description: R interface to Python via Jython allowing R to call python
X-CRAN-Original-Maintainer: Carlos J. Gil Bellosta
X-CRAN-Comment: Orphaned on 2012-07-30 after 7 months of non-response.

Title: (Kernel) Isotope Niche Estimation
Authors@R: person("Shannon E", "Albeke", email = "salbeke@uwyo.edu",
Maintainer: Shannon E Albeke <salbeke@uwyo.edu>
Description: Applies methods used to estimate animal homerange, but
instead of geospatial coordinates, we use isotopic coordinates. The estimation
methods include: 1) 2-dimensional bivariate normal kernel utilization density
estimator, 2) bivariate normal ellipse estimator, and 3) minimum convex polygon
estimator, all applied to stable isotope data. Additionally, functions to
determine niche area, polygon overlap between groups and levels (confidence

Title: Minicircle Sequence Cluster (MSC) Analyses
Authors@R: c(person("Frederik", "Van den Broeck", role = c("aut"),
person("Manon", "Geerts", role = c("aut", "cre"), email = "mgeerts@itg.be") )
Description: It establishes a critical framework to manipulate, explore and extract biologically relevant information from mitochondrial minicircle assemblies in tens to hundreds of samples simultaneously and efficiently. This should facilitate research that aims to develop new molecular markers for identifying species-specific minicircles, or to study the ancestry of parasites for complementary insights into their evolutionary history.
Imports: ggplot2, ape, circlize, ComplexHeatmap, reshape2, utils,
stats, dplyr, factoextra, FactoMineR, ggpubr, magrittr, stringr