Title: Integrating External Controls into Association Test
Description: Functions for single-variant and region-based tests with external control samples. These methods use external study samples as control samples with adjusting for possible batch effects.

Title: An integrative factor analysis model for drug-pathway
Description: This package implements a bayesian sparse factor model for
the joint analysis of paired datasets, one is the gene
expression dataset and the other is the drug sensitivity
profiles, measured across the same panel of samples, e.g., cell
lines. Prior knowledge about gene-pathway associations can be
easily incorporated in the model to aid the inference of

Description: This package implements a Bayesian sparse factor model for the joint analysis of paired datasets, one is the gene expression dataset and the other is the drug sensitivity profiles, measured across the same panel of samples, e.g., cell lines. Prior knowledge about gene-pathway associations can be easily incorporated in the model to aid the inference of drug-pathway associations.

Title: Incremental Feature Selection Algorithm accelerated by GPU
Depends: R (>= 2.10), ROCR, parallel, doParallel, foreach
SystemRequirements: Nvidia's CUDA toolkit (>= release 5.5)
Description: Incremental gene selection algorithm(iFes) expands the screening targets in each step of the forward stepwise algorithm, and proposes a novel feature selection algorithm iFes with both high accuracies and low feature numbers. Logistic regression classification algorithm accelerated by NVIDIA GPU is utilized to measure how good the currently chosen feature subset is.

Title: Machine Learning Time Series Forecasting
Description: Compute both static and recursive time series forecasts of machine learning models.
Suggests: data.table, DescTools, forecast, h2o, keras, kernlab,
lubridate, tensorflow, tibble, timeSeries, timeDate, timetk

Description: Compute both static onestep and iterative multistep time series forecasts of machine learning models.
Suggests: data.table, forecast, h2o, keras, kernlab, lubridate,
tensorflow, tibble, timeSeries, timeDate, timetk