Description: A systematic biology tool was developed to repurpose drugs via a subpathway crosstalk network. The operation modes include 1) calculating centrality scores of SPs in the context of gene expression data to reflect the influence of SP crosstalk, 2) evaluating drug-disease reverse association based on disease- and drug-induced SPs weighted by the SP crosstalk, 3) identifying cancer candidate drugs through perturbation analysis. There are also several functions used to visualize the results.

Title: Dynamical Systems Approach to Infectious Disease Epidemiology
Description: A collection of Shiny apps that allow for the simulation and
exploration of various infectious disease transmission dynamics scenarios.
The purpose of the package is to help individuals learn
about infectious disease epidemiology from a dynamical systems perspective.
All apps include explanations of the underlying models and instructions on
person("Andreas", "Handel", email = "ahandel@uga.edu",
person("Sina", "Solaimanpour",  role = "ctb") )
Imports: deSolve (>= 1.13), knitr (>= 1.15), adaptivetau (>= 2.2),

person("Andreas", "Handel", email = "ahandel@uga.edu", role = c("aut", "cre")),
person("Spencer", "Hall",  role = "ctb"),
person("Brian", "McKay",  role = "ctb"),
person("John", "Rossow",  role = "ctb"),
person("Sina", "Solaimanpour",  role = "ctb")

person("Sina", "Solaimanpour",  role = "ctb"),
Imports: adaptivetau (>= 2.2), deSolve (>= 1.13), dplyr (>= 0.7.4),
Author: Andreas Handel [aut, cre] (<https://orcid.org/0000-0002-4622-1146>),

Description: A collection of 'shiny' apps that allow for the simulation and
person("Isaac Chun-Hai", "Fung",  role = "ctb"),
Suggests: covr, knitr (>= 1.15), pkgdown, rmarkdown (>= 1.10), testthat

person("Christine", "Casey",  role = "ctb", comment = "Parasite Model App"),
person("Ronald", "Galiwango",  role = "ctb", comment = "Surveillance App"),
person("Chase", "Golden",  role = "ctb", comment = "Maternal Immunity App"),
person("Kevin", "Spiegel",  role = "ctb", comment = "Global Warming App"),
Suggests: covr, devtools, knitr (>= 1.15), pkgdown, rmarkdown (>=
Christine Casey [ctb] (Parasite Model App),
Ronald Galiwango [ctb] (Surveillance App),
Chase Golden [ctb] (Maternal Immunity App),
Kevin Spiegel [ctb] (Global Warming App),