Rcpp, testthat, Ternary (>= 1.1.2), TreeDistData (> 0.1.0),

Includes tools for visualizing the landscape of a tree space, and for
calculating the median of a set of trees under any distance metric.
Rdpack, shiny, shinyjs, TreeTools (> 1.3.1)
Suggests: bookdown, cluster, kdensity, knitr, MASS, protoclust,
Quartet, readxl, rmarkdown, Rcpp, rgl, testthat, Ternary (>=
1.1.2), TreeDistData (> 0.1.0), TreeSearch, vdiffr, viridisLite

Title: Calculate and Map Distances Between Phylogenetic Trees
Includes tools for visualizing mappings of tree space, for
calculating the median of sets of trees, and for computing the information
Imports: ape (>= 5.0), colorspace, memoise, phangorn (>= 2.2.1), Rdpack
(>= 0.7), shiny, shinyjs, TreeTools (> 1.3.1)
Suggests: bookdown, cluster, ggplot2, kdensity, knitr, MASS,
protoclust, Quartet, readxl, rmarkdown, Rcpp, rgl, testthat,
Ternary (>= 1.1.2), TreeDistData (> 0.1.0), TreeSearch,

Imports: ape (>= 5.0), cli (>= 3.0), colorspace, memoise, phangorn (>=
2.2.1), Rdpack (>= 0.7), shiny, shinyjs, TreeTools (>= 1.5.0)
Suggests: bookdown, cluster, ggplot2, kdensity, knitr, MASS, parallel,
protoclust, Quartet, readxl, rmarkdown, Rcpp, rgl, testthat (>=
3.0), Ternary (>= 1.1.2), TreeDistData (> 0.1.0), TreeSearch,

Matching Split Information Distance; Smith 2020)
Includes tools for visualizing mappings of tree space (Smith 2022)
for calculating the median of sets of trees,
and for computing the information content of trees and splits.
Suggests: bookdown, cluster, ggplot2, hypervolume, kdensity, knitr,
MASS, parallel, protoclust, Quartet, readxl, rmarkdown, Rcpp,
rgl, spelling, testthat (>= 3.0), Ternary (>= 1.1.2),
TreeDistData (> 0.1.0), TreeSearch, Umatrix, uwot, vdiffr (>=

Copyright: Jonker-Volgenant Linear Assignment Problem implementation by
Roy Jonker modified by Yong Yang and Yi Cao.
2.2.1), Rdpack (>= 0.7), shiny, shinyjs, TreeTools (>= 1.7.0),
MASS, parallel, protoclust, Quartet, readxl, rmarkdown, Rcpp
(>= 1.0.8), rgl, spelling, testthat (>= 3.0), Ternary (>=
1.1.2), TreeDistData (> 0.1.0), TreeSearch, Umatrix, uwot,