Author: Bastian Pfeifer [aut, cre], Ulrich Wittelsbuerger [ctb], Heng Li [ctb], Bob Handsaker [ctb]
Authors@R: c(	person("Bastian", "Pfeifer", role = c("aut", "cre"), email = "Bastian.Pfeifer@uni-duesseldorf.de"),
person("Ulrich", "Wittelsbuerger", role = "ctb"),
person("Bob", "Handsaker", role = "ctb")			)
Description: Provides efficient tools for population genomics data analysis,
able to process individual loci, large sets of loci, or whole genomes. PopGenome not only
implements a wide range of population genetics statistics, but also facilitates the easy
implementation of new algorithms by other researchers. PopGenome is optimized for speed via
SystemRequirements: zlib headers and library.

Authors@R: c(	person("Bastian", "Pfeifer", role = c("aut", "cre"), email = "bastianxpfeifer@gmail.com"),
Suggests: parallel, bigmemory, BASIX, WhopGenome, BlockFeST
able to process individual loci, large sets of loci, or whole genomes. PopGenome <DOI:10.1093/molbev/msu136> not only

Title: Genomic Breeding Tools: Genetic Variance Prediction and
Author: Tyler Tiede [aut, cre],  Mohsen Mohammadi [ctb], Kevin P. Smith [ctb]
Description: The main attribute of 'PopVar' is the prediction of genetic variance in bi-parental populations, from which the package derives its name. 'PopVar' contains a set of functions that use phenotypic and genotypic data from a set of candidate parents to 1) predict the mean, genetic variance, and superior progeny value of all, or a defined set of pairwise bi-parental crosses, and 2) perform cross-validation to estimate genome-wide prediction accuracy of multiple statistical models. More details are available in Mohammadi, Tiede, and Smith (2015). Crop Sci. doi:10.2135/cropsci2015.01.0030. A dataset 'think_barley.rda' is included for reference and examples.
Packaged: 2015-03-31 22:29:51 UTC; tylertiede

Packaged: 2015-04-28 17:08:08 UTC; tylertiede

Imports: BGLR, qtl, rrBLUP, stats, utils
Packaged: 2015-07-08 11:30:11 UTC; tylertiede

Packaged: 2015-06-17 20:02:19 UTC; tylertiede