Title: Incidence Curve Decomposition by Inverting the Renewal Equation
of time-varying reproduction numbers, 7-day seasonality, and restored incidence
curves with festive days bias corrected as described in
Alvarez et al. (2022) <doi:10.3390/biology11040540>. 'EpiInvert' can manage
package also includes 'EpiInvertForecast', a learning method for the short time

Title: A Bayesian Tool for Near Real-Time Estimation of the
Description: Estimation of the instantaneous reproduction number with
Laplacian-P-splines following the methodology of Gressani et al.(2021)
distribution is used to model the time series of case counts. Two methods are
available for inference : (1) a sampling-free approach based on a maximum a
posteriori calibration of the hyperparameter vector and (2) a fully stochastic
approach with a Metropolis-within-Gibbs algorithm and Langevin diffusions for
efficient sampling of the posterior distribution.
Author: Oswaldo Gressani [aut, cre] (<https://orcid.org/0000-0003-4152-6159>)

Title: A Bayesian Tool for Approximate Real-Time Estimation of the

Title: A Bayesian Tool for Fast and Flexible Estimation of the

Maintainer: Samuel M. Jenness <sjenness@uw.edu>
Authors@R: c( person("Samuel", "Jenness", role=c("cre","aut"),
Title: Mathematical Modeling of Infectious Disease
Description: Tools for building, solving, and plotting mathematical
Depends: R (>= 2.15), deSolve, RColorBrewer

Description: Tools for building, solving, and plotting mathematical models of
Depends: R (>= 3.0), network (>= 1.9.0), networkDynamic (>= 0.6.1),
Imports: deSolve (>= 1.10-6), RColorBrewer, statnet.common

Description: Tools for simulating mathematical models of infectious disease.
Epidemic model classes include deterministic compartmental models,
stochastic individual contact models, and stochastic network models.
Disease types include SI, SIR, and SIS epidemics with and without
demography, with tools available for expansion to model complex epidemic
Depends: R (>= 3.0), network (>= 1.9.0), networkDynamic (>= 0.6.3),
Imports: deSolve (>= 1.10-6), ergm (>= 3.1.2), RColorBrewer,