Description: Contains basic structures and operations used frequently in quantum computing. Intended to be a convenient tool to help learn quantum mechanics and algorithms. Can create arbitrarily sized kets and bras and implements quantum gates, inner products, and tensor products. Creates arbitrarily controlled versions of all gates and can simulate complete or partial measurements of kets. Has functionality to convert functions into equivalent quantum gates and model quantum noise. Includes larger applications, such as Steane error correction <DOI:10.1103/physrevlett.77.793>, Quantum Fourier Transform and Shor's algorithm (Shor 1999), Grover's algorithm (1996), Quantum Approximation Optimization Algorithm (QAOA) (Farhi, Goldstone, and Gutmann 2014) <arXiv:1411.4028>, and a variational quantum classifier (Schuld 2018) <arXiv:1804.00633>. Can be used with the gridsynth algorithm <arXiv:1212.6253> to perform decomposition into the Clifford+T set.

Title: Comparison of Phylogenetic Trees Using Quartet and Bipartition
Description: Calculates the number of four-taxon subtrees consistent with a pair
of cladograms, calculating the symmetric quartet distance of Bandelt & Dress (1986),
Reconstructing the shape of a tree from observed dissimilarity data,
and using the tqDist algorithm of Sand et al. (2014), tqDist: a library for
computing the quartet and triplet distances between binary or general trees,
person('Christian N. S.', 'Pedersen', email='cstorm@birc.au.dk',
Copyright: Incorporates code modified from tqDist
Imports: ape, memoise, phangorn, Rcpp, Rdpack, Ternary (>= 1.0),
Suggests: bookdown, knitr, rmarkdown, testthat, usethis

Imports: ape, memoise, Rdpack, Ternary (>= 1.0), TreeSearch (>= 0.2.1)
Suggests: bookdown, knitr, phangorn, Rcpp, rmarkdown, testthat, usethis

Imports: ape, memoise, Rdpack, Ternary (>= 1.0), TreeSearch (> 0.3.0)

Title: Comparison of Phylogenetic Trees Using Quartet and Split
Imports: ape, memoise, Rdpack, Ternary (>= 1.0), TreeTools
Suggests: bookdown, knitr, phangorn, Rcpp, rmarkdown, testthat,