and optionally mark data. Supports micrometers, cM and Mb. Marks can have square, dot, or cM style,
kableExtra, prettydoc, rvcheck, badger, rmarkdown, RCurl

Four styles of marks are available: square, dots, cM, cenStyle, upArrow, downArrow;

for chromosome data and optionally mark data. Two styles of chromosomes can be used: without or with
Supports micrometers, cM and Mb or any unit. Two styles of centromeres are available: triangular and rounded;
and seven styles of marks: square, dots, cM, cMLeft, cenStyle, upArrow, downArrow;

and six styles of marks: square (squareLeft), dots, cM (cMLeft), cenStyle, upArrow, downArrow;
Suggests: plyr, rmdformats, knitr, kableExtra, rvcheck, badger,
rmarkdown, RCurl, ggpubr, ggtree, phytools, ggplot2, treeio,
VignetteBuilder: plyr, rmdformats, knitr, kableExtra, rmarkdown, RCurl,

Suggests: plyr, rentrez, ggplot2, ggpubr, ggtree, phytools, treeio,
rmdformats, knitr, kableExtra, rvcheck, badger, rmarkdown,

Description: Plot idiograms of karyotypes, plasmids, circular chr. having a set of data.frames for chromosome data and optionally mark data. Two styles of chromosomes can be used: without or with visible chromatids (when not circular). Supports micrometers, cM and Mb or any unit. Two styles of centromeres are available: triangular and rounded; and six styles of marks: square (squareLeft), dots, cM (cMLeft), cenStyle, upArrow, downArrow; its legend (label) can be drawn inline or to the right of karyotypes. Idiograms can also be plotted in concentric circles. It is possible to calculate chromosome indices by Levan et al. (1964) <doi:10.1111/j.1601-5223.1964.tb01953.x>, karyotype indices of Watanabe et al. (1999) <doi:10.1007/PL00013869> and Romero-Zarco (1986) <doi:10.2307/1221906> and classify chromosomes by morphology Guerra (1986) and Levan et al. (1964).

Imports: crayon, knitr, kableExtra, prettydoc, badger, rvcheck

Imports: crayon, knitr, kableExtra, prettydoc, badger, rvcheck,
Suggests: RCurl, ggpubr, ggtree, phytools, ggplot2, treeio

Title: Shiny App. Idiograms with Marks and Karyotype Indices