Description: The package contains functions to: 1) load ah files from Strand software and build a R data
base; 2) plot different graphical displays of the fragment sizes obtained for each locus and their bins; 3)
interact with graphs to sort the data base for a given locus and range, allowing to easily  trace back a
particular group of samples to its original Strand file; bin fragment size data into population genetics files.

4) From version 1.04 on, the user can set manually bin limits and write files combining the manual and

Title: Parametric Estimation in Mixed-Effects Stochastic Differential
Authors@R: c(person(given="Maud", family="Delattre", role = c("aut","cre"),
person(given="Charlotte", family="Dion", role = "aut")
Description: Parametric estimation in stochastic differential equations with random effects in the drift, or in the diffusion or both. Approximate maximum likelihood methods are used. M. Delattre, V. Genon-Catalot and A. Samson (2012) <doi:10.1111/j.1467-9469.2012.00813.x> M. Delattre, V. Genon-Catalot and A. Samson (2015) <doi:10.1051/ps/2015006> M. Delattre, V. Genon-Catalot and A. Samson (2016) <doi:10.1016/j.jspi.2015.12.003>.
Imports: MASS, sde, moments, mvtnorm, methods, graphics
Packaged: 2017-09-15 16:48:37 UTC; mdelattre

Title: A Shiny Application for Automatic Measurements of Tree-Ring
Imports: png, jpeg, tiff, bmp, magick, imager, dplR, spatstat,
Description: Use morphological image processing and edge detection algorithms to automatically identify tree-ring boundaries on digital images. Tree-ring boundaries are determined by the changes of light reflectance from late wood to early wood. Two geometric models are provided to calibrate the errors resulted from inclined rings. The package provides a Shiny-based application, allowing R beginners to easily analyze tree-ring images and export ring-width series in standard file formats.

Authors@R: c(person("Jingning", "Shi", role = c("aut", "cre"), email = "snow940220@bjfu.edu.cn"), person("Wei", "Xiang", role = "aut"))
Suggests: testthat, knitr, shinytest, mockery, spelling
Imports: magrittr (>= 1.5), png, jpeg, tiff, bmp, magick, imager, dplR,
spatstat, measuRing, shiny, dplyr, shinydashboard, shinyWidgets
Description: Use morphological image processing and edge detection algorithms to automatically measure tree ring widths on digital images. Users can also manually mark tree rings on species with complex anatomical structures. The arcs of inner-rings and angles of successive inclined ring boundaries are used to correct ring-width series. The package provides a Shiny-based application, allowing R beginners to easily analyze tree ring images and export ring-width series in standard file formats.