person("Daniel", "Jacob", email="daniel.jacob@inra.fr", role=c("cre", "aut"), comment=c(ORCID="0000-0002-6687-7169")))
Depends: R (>= 3.1.1), methods, RCurl (>= 1.95)

Title: Identify Rogue Taxa in Sets of Phylogenetic Trees
person(given = "Andre J.", family="Aberer", role = c("aut", "cph"),
Description: Interface to 'RogueNaRok' (Aberer et al. 2013)
Rogue taxa are a class of taxa with uncertain position in a
phylogenetic tree. For inference methods that yield a tree set (bootstrapping,
Bayesian tree searches), rogue taxa can assume different positions for each
tree. The presence of rogue taxa in a tree set can potentially remove all
information from a consensus tree. The sum of branch support
values in a consensus tree can often be increased by removing rogue taxa.
Suggests: testthat, TreeTools (>= 1.4.5)

Description: Rogue ('wildcard') taxa are leaves with uncertain phylogenetic
Their position may vary from tree to tree under inference methods that yield a
tree set (e.g. bootstrapping, Bayesian tree searches, maximum parsimony).
The presence of rogue taxa in a tree set can potentially remove all
information from a consensus tree. The information content of a consensus
tree - a function of its resolution and branch support values - can often be
'Rogue' provides an explicitly information-theoretic approach to rogue
detection (Smith, forthcoming), and an interface to 'RogueNaRok'
Imports: ape (>= 5.0), cli (>= 3.0), fastmatch, grDevices, matrixStats,
Rdpack (>= 0.7), Rfast, stats, TreeDist (>= 2.1.1), TreeTools

Description: Rogue ("wildcard") taxa are leaves with uncertain phylogenetic
and an interface to 'RogueNaRok' (Aberer et al. 2013)
Rdpack (>= 0.7), Rfast, stats, TreeDist (> 2.2.0), TreeTools
Suggests: knitr, rmarkdown, spelling, testthat,

Title: Subroutines to Estimate Rolling Window Multiple Correlation
Authors@R: c(person("Josue M.", "Polanco-Martinez", role = c("aut",
"cph", "cre"), email = "josue.m.polanco@gmail.com"))
Depends: R (>= 3.5.0), stats, gtools, pracma, colorspace

Depends: R (>= 3.5.0), stats, gtools, zoo, pracma, colorspace