Package: BOSO
Type: Package
Title: Bilevel Optimization Selector Operator
Version: 1.0.3
Date: 2021-06-15
Authors@R: c(person("Luis V.", "Valcarcel", role = c("aut", "cre", "ctb"),
email = "lvalcarcel@unav.es", comment = c(ORCID = "0000-0003-3769-5419")),
person("Edurne", "San Jose-Eneriz", role = "aut", comment = c(ORCID = "0000-0001-5786-5273")),
person("Xabier", "Cendoya", role = c("aut","ctb"), comment = c(ORCID = "0000-0001-8401-4087")),
person("Angel", "Rubio", role = c("aut","ctb"), comment = c(ORCID = "0000-0002-3274-2450")),
person("Xabier", "Agirre", role = "aut", comment = c(ORCID = "0000-0002-6558-9560")),
person("Felipe", "Prósper", role = "aut", comment = c(ORCID = "0000-0001-6115-8790")),
person("Francisco J.", "Planes", role = c("aut","ctb"),
email = "fplanes@tecnun.es", comment = c(ORCID = "0000-0003-1155-3105")))
Description: A novel feature selection algorithm for linear regression called
BOSO (Bilevel Optimization Selector Operator). The main contribution is the
use a bilevel optimization problem to select the variables in the training
problem that minimize the error in the validation set. Preprint available:
[Valcarcel, L. V., San Jose-Eneriz, E., Cendoya, X., Rubio, A., Agirre, X.,
Prosper, F., & Planes, F. J. (2020). "BOSO: a novel feature selection
algorithm for linear regression with high-dimensional data." bioRxiv.
<doi:10.1101/2020.11.18.388579>].
In order to run the vignette, it is recommended to install the 'bestsubset' package,
using the following command: devtools::install_github(repo="ryantibs/best-subset", subdir="bestsubset").
If you do not have gurobi, run devtools::install_github(repo="lvalcarcel/best-subset", subdir="bestsubset").
SystemRequirements: IBM ILOG CPLEX (>= 12.1)
Depends: R (>= 4.0)
Imports: Matrix, MASS, methods
Suggests: cplexAPI, testthat, glmnet, knitr, rmarkdown, ggplot2,
ggpubr, dplyr, kableExtra, devtools, BiocStyle, bestsubset
License: GPL-3
LazyData: true
RoxygenNote: 7.1.1
Encoding: UTF-8
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2021-06-30 15:22:19 UTC; lvalcarcel
Author: Luis V. Valcarcel [aut, cre, ctb]
(<https://orcid.org/0000-0003-3769-5419>),
Edurne San Jose-Eneriz [aut] (<https://orcid.org/0000-0001-5786-5273>),
Xabier Cendoya [aut, ctb] (<https://orcid.org/0000-0001-8401-4087>),
Angel Rubio [aut, ctb] (<https://orcid.org/0000-0002-3274-2450>),
Xabier Agirre [aut] (<https://orcid.org/0000-0002-6558-9560>),
Felipe Prósper [aut] (<https://orcid.org/0000-0001-6115-8790>),
Francisco J. Planes [aut, ctb]
(<https://orcid.org/0000-0003-1155-3105>)
Maintainer: Luis V. Valcarcel <lvalcarcel@unav.es>
Repository: CRAN
Date/Publication: 2021-07-01 07:40:11 UTC