Imports: parallel, doParallel, foreach, adegenet
Description: StAMPP allows users to calculate pairwise Nei's Genetic Distances (Nei 1972), pairwise Fixation
Indexes (Fst) (Weir & Cockerham 1984) and also Genomic Relationship matrixes following Yang et al. (2010) in mixed and single
ploidy populations. Bootstrapping across loci is implemented during Fst calculation to generate confidence intervals and p-values
around pairwise Fst values. StAMPP utilises SNP genotype data of any ploidy level (with the ability to handle missing data) and is coded to
utilise multithreading where available to allow efficient analysis of large datasets. StAMPP is able to handle genotype data from genlight objects
allowing integration with other packages such adegenet.
Please refer to LW Pembleton, NOI Cogan & JW Forster, 2013, Molecular Ecology Resources, 13(5), 946-952. doi:10.1111/1755-0998.12129 for the appropriate citation and user manual. Thank you in advance.

Imports: parallel, doParallel, foreach, adegenet, methods, utils
Description: Allows users to calculate pairwise Nei's Genetic Distances (Nei 1972), pairwise Fixation

Please refer to LW Pembleton, NOI Cogan & JW Forster, 2013, Molecular Ecology Resources, 13(5), 946-952. <doi:10.1111/1755-0998.12129> for the appropriate citation and user manual. Thank you in advance.

Description: Implementation of the family of generalised age-period-cohort
stochastic mortality models.  This family of models encompasses many models
proposed in the actuarial and demographic literature including the Lee-Carter model
and the Cairns-Blake-Dowd model. It includes functions for fitting mortality models,
analysing their goodness-of-fit and performing mortality projections and
Imports: MASS, rootSolve (>= 1.6.5.1), fanplot (>= 3.4), reshape2 (>=
Packaged: 2015-06-10 00:06:49 UTC; Andres M Villegas

Packaged: 2015-10-13 07:24:51 UTC; Andres M Villegas

stochastic mortality models. This family of models encompasses many models
proposed in the actuarial and demographic literature including the Lee-Carter
model and the Cairns-Blake-Dowd model. It includes functions for fitting
mortality models, analysing their goodness-of-fit and performing mortality
Packaged: 2016-02-09 18:48:25 UTC; Andres M Villegas