Wrapper of the 'Petfinder API' <https://www.petfinder.com/developers/v2/docs/> that implements
REST API' allows access to the 'Petfinder' database, one of the largest online databases of
adoptable animals and animal welfare organizations across North America.
Suggests: testthat, knitr, rmarkdown, dplyr
Packaged: 2019-08-23 15:16:35 UTC; aaronschlegel

Suggests: lubridate, testthat, knitr, rmarkdown, dplyr, httr, jsonlite
Packaged: 2020-07-07 15:35:47 UTC; aaronschlegel

Title: Pharmacovigilance signal detection methods extended to the multiple comparison setting.
Description: PhViD proposes the main pharmacovigilance signal detection methods extended to the multiple comparison setting. Those functions can be used as standard R functions or through an user friendly interface (PhViD.gui)
Packaged: Wed Mar  4 11:42:51 2009; isma

Title: PhViD: a R package for PharmacoVigilance signal Detection.
Description: PhViD contains several pharmacovigilance signal detection
methods extended to the multiple comparison setting. These
functions can be used as standard R functions or through an

Title: PhViD: an R package for PharmacoVigilance signal Detection.
Depends: R (>= 2.10), LBE, MCMCpack, tcltk

methods extended to the multiple comparison setting.

Description: A collection of several pharmacovigilance signal detection methods extended to the multiple comparison setting.

Packaged: Tue Mar  3 11:52:40 2009; isma

Title: Design of the Best Phage Cocktail
Description: There are 4 possible methods: "ExhaustiveSearch"; "ExhaustivePhi";
"ExhaustiveSearch"--> gives you the best phage cocktail from a phage-bacteria
infection network. It checks different phage cocktail sizes from 1 to 7 and
only stops before if it lyses all bacteria. Other option is when users have
decided not to obtain a phage cocktail size higher than a limit value.
"ExhaustivePhi"--> firstly, it finds Phi out. Phi is a formula
indicating the necessary phage cocktail size. Phi needs nestedness temperature
and fill, which are internally calculated. This function will only look for the
best combination (phage cocktail) with a Phi size.
"ClusteringSearch"--> firstly, an agglomerative hierarchical clustering using
Ward's algorithm is calculated for phages. They will be clustered according to
bacteria lysed by them. PhageCocktail() chooses how many clusters are needed in
order to select 1 phage per cluster. Using the phages selected during the
clustering, it checks different phage cocktail sizes from 1 to 7 and only stops
before if it lyses all bacteria. Other option is when users have decided not to
obtain a phage cocktail size higher than a limit value.
"ClusteringPhi"--> firstly, an agglomerative hierarchical clustering using Ward's
algorithm is calculated for phages. They will be clustered according to bacteria
lysed by them. PhageCocktail() chooses how many clusters are needed in order to
select 1 phage per cluster. Once the function has one phage per cluster, it
calculates Phi. If the number of clusters is less than Phi number, it will be
changed to obtain, as minimum, this quantity of candidates (phages). Then, it
calculates the best combination of Phi phages using those selected during the
Imports: readxl, stringr, factoextra, bipartite, smerc, RJSONIO
Author: Maria Victoria Diaz-Galian [aut, cre]
Maintainer: Maria Victoria Diaz-Galian <mvdiazgalian@unex.es>