Title: Gene Set Uncertainty in Enrichment Analysis
Author: Florian Schmid, Christoph Müssel, Johann M. Kraus, Hans A. Kestler
Description: Toolbox for various enrichment analysis methods and quantification of uncertainty of gene sets.
Imports: parallel, graphics, grDevices, methods, stats, utils
Suggests: GlobalAncova, globaltest, fdrtool, st, limma, DESeq

Author: Florian Schmid, Christoph Muessel, Johann M. Kraus, Hans A. Kestler
Description: Toolbox for various enrichment analysis methods and quantification of uncertainty of gene sets (Schmid et al. (2016) <doi:10.1093/bioinformatics/btw030>).
Suggests: GlobalAncova, globaltest, fdrtool, st, limma, DESeq2
Packaged: 2020-09-28 15:33:40 UTC; julian_schwab

Packaged: 2020-05-04 13:12:04 UTC; julian_schwab

Author: Luis Diaz-Garcia and Giovanny Covarrubias-Pazaran, with collaborations of Brandon Schlautman, Walter Salazar and Juan Zalapa.
Description: Performs image segmentation in fruit or seeds pictures in order to measure physical features in a high-throughput manner for genome-wide association (GWAS) and genomic selection programs.
Depends: R (>= 3.2.1), methods, stats, EBImage, png, parallel,

Author: Julien Stoehr, Pierre Pudlo and Nial Friel
sampling from Gibbs Random Fields, and more precisely general
homogeneous Potts model. The primary tool is the exact computation of
the intractable normalising constant for small rectangular lattices.
Beside the latter function, it contains method that give exact sample from the likelihood
for small enough rectangular lattices or approximate sample from the
likelihood using MCMC samplers for large lattices.

Title: Gibbs Sampler for One-Way Mixed-Effects ANOVA and ANCOVA Models
Description: Gibbs sampler for one-way linear mixed-effects models
(ANOVA, ANCOVA) with homoscedasticity of errors and uniform
Packaged: 2013-05-02 21:07:55 UTC; emilygoren

Packaged: 2013-05-06 04:29:46 UTC; emilygoren

Title: Multivariate Analysis with Optimal Scaling
Authors@R: c(person("Patrick", "Mair", role = c("aut", "cre"), email = "mair@fas.harvard.edu"), person("Jan", "De Leeuw", role = "aut"), person("Patrick J. F.", "Groenen", role = "ctb"))
Description: Implements categorical principal component analysis ('PRINCALS'), multiple correspondence analysis ('HOMALS'), monotone regression analysis ('MORALS'). It replaces the 'homals' package.