Title: United Formula Annotation (UFA) for HRMS Data Processing
Imports: IDSL.MXP, xml2, base64enc, IDSL.IPA (>= 1.4), stats, grid,
readxl, parallel, doSNOW, foreach, GA, doParallel, ggplot2,

Imports: IDSL.MXP (>= 1.2), xml2, RNetCDF, base64enc, IDSL.IPA (>=
1.5), stats, grid, readxl, parallel, doParallel, foreach, GA,
Description: A pipeline to annotate peaklists from the IDSL.IPA package with molecular formula using an isotopic profile matching approach. The IDSL.UFA pipeline is especially beneficial when MS/MS data channels are not available. The IDSL.UFA package has functions to process user-defined adduct formulas.

Description: A pipeline to annotate peaklists from the IDSL.IPA package with molecular formula using an isotopic profile matching approach. The IDSL.UFA pipeline is especially beneficial when MS/MS data are not available. The IDSL.UFA package has functions to process user-defined adduct formulas.

Imports: IDSL.MXP (>= 1.4), xml2, RNetCDF, base64enc, IDSL.IPA (>=
1.7), stats, grid, readxl, parallel, doParallel, foreach, GA,

2.1), stats, grid, readxl, parallel, doParallel, foreach, GA,
Description: A pipeline to annotate peaklists from the IDSL.IPA package with molecular formula using an isotopic profile matching approach. The IDSL.UFA pipeline is especially beneficial when MS/MS data is not available. The IDSL.UFA package has functions to process user-defined adduct formulas.

Description: A pipeline to annotate peaklists from the IDSL.IPA package with molecular formula of a prioritized chemical space using an isotopic profile matching approach. The IDSL.UFA pipeline only requires MS1 for formula annotation.

Imports: IDSL.IPA (>= 2.1), doParallel, foreach, readxl

Title: Exhaustive Chemical Enumeration for Ultimate Formula Annotation
stringr, RcppAlgos, IDSL.IPA (>= 1.3), IDSL.UFA
Description: A pipeline to annotate a number of peaks from the IDSL.IPA peaklists using a exhaustive chemical enumeration-based approach.

Title: Exhaustive Chemical Enumeration for United Formula Annotation
Imports: IDSL.MXP, xml2, base64enc, IDSL.IPA (>= 1.4), IDSL.UFA (>=
1.1), stats, readxl, parallel, doSNOW, foreach, RcppAlgos