Title: Estimate the Water Influx into Hydrocarbon Reservoirs
Description: Generate a table of cumulative water influx into hydrocarbon reservoirs over time using un-steady and pseudo-steady state models. Van Everdingen, A. F. and Hurst, W. (1949) <doi:10.2118/949305-G>. Fetkovich, M. J. (1971) <doi:10.2118/2603-PA>. Yildiz, T. and Khosravi, A. (2007) <doi:10.2118/103283-PA>.
Imports: Rdpack, magrittr, dplyr, pracma, gsl

Title: Combinatorial and Statistical Analyses of Rare Events
Description: A custom implementation of the apriori algorithm and binomial tests to identify combinations of features (genes, variants etc) significantly enriched for simultaneous mutations/events from sparse Boolean input, see Vijay Kumar Pounraja, Santhosh Girirajan (2021). <doi:10.1101/2021.10.01.462832>.
Imports: magrittr, arules, dplyr, methods, pwr, stringr, tidyr,
Maintainer: Vijay Kumar Pounraja <vijaykumar.mp@gmail.com>

Description: A custom implementation of the apriori algorithm and binomial tests to identify combinations of features (genes, variants etc) significantly enriched for simultaneous mutations/events from sparse Boolean input, see Vijay Kumar Pounraja, Santhosh Girirajan (2021). Version 1.1 includes a minor adjustment to the number of combinations to be considered for multiple testing correction. This updated version is more conservative in its approach and hence more selective. <doi:10.1101/2021.10.01.462832>.

Description: Includes functions for the calculation of spatially and non-spatially explicit rarefaction curves using different indices of taxonomic, functional and phylogenetic diversity. The user can also rarefy any biodiversity metric as provided by a self-written function (or an already existent one) that gives as output a vector with the values of a certain index of biodiversity calculated per plot (Ricotta, C., Acosta, A.,  Bacaro, G., Carboni, M., Chiarucci, A.,  Rocchini, D., Pavoine, S. (2019) <doi:10.1016/j.ecolind.2019.105606>; Bacaro, G., Altobelli, A., Cameletti, M., Ciccarelli, D., Martellos, S., Palmer, M. W., … Chiarucci, A. (2016) <doi:10.1016/j.ecolind.2016.04.026>; Bacaro, G., Rocchini, D., Ghisla, A., Marcantonio, M., Neteler, M., & Chiarucci, A. (2012) <doi:10.1016/j.ecocom.2012.05.007>).
Packaged: 2020-05-21 16:20:53 UTC; elisathouverai