Description: Individual-based simulations forward in time, simulating how patterns in ancestry along the genome change after admixture. Full description can be found in Janzen (2020) <doi:10.1101/2020.10.19.343491>.
Imports: hierfstat, methods, Rcpp, tibble, ggplot2, rlang, ggridges
Suggests: covr, dplyr, junctions, magrittr, rmarkdown, testit,

Description: Individual-based simulations forward in time,
simulating how patterns in ancestry along the genome change after
admixture. Full description can be found in Janzen (2020)
Imports: ggplot2, ggridges, hierfstat, methods, Rcpp, RcppParallel,
Suggests: covr, dplyr, junctions, knitr, magrittr, rmarkdown, testit,

admixture. Full description can be found in Janzen (2021)
Suggests: dplyr, junctions, knitr, magrittr, rmarkdown, testit,
Packaged: 2022-02-28 09:19:46 UTC; thijsjanzen

Title: Efficient Breeding by Genomic Mating
Description: Implements the genomic mating approach in the recently published article: Akdemir, D., & Sanchez, J. I. (2016). Efficient Breeding by Genomic Mating. Frontiers in Genetics, 7. <DOI:10.3389/fgene.2016.00210>.
Imports: Rcpp (>= 0.12.9), parallel, stats
Packaged: 2017-03-31 16:17:55 UTC; denizakdemir

Packaged: 2017-05-22 17:05:31 UTC; denizakdemir

Packaged: 2017-05-22 19:52:40 UTC; denizakdemir

Imports: Rcpp (>= 0.12.9), parallel, stats, emoa, scatterplot3d
Packaged: 2017-10-02 17:28:55 UTC; denizakdemir

Author: Deniz Akdemir, Julio Isidro Sanch\'ez, Hanna Haikka, Itaraju Baracuhy Brum

Title: Collection of Tools for Genomic Data Analysis
Description: A loose collection of tools for the analysis of expression and genotype data, currently with the main focus on (e)QTL and MDR analysis.

Title: File Handlers for Genomic Data Analysis
Description: A collection of I/O tools for handling the most commonly used genomic datafiles, like fasta/-q, bed, gff, gtf, ped/map and vcf.

Description: Make geographic box plot as detailed in Willmott et al. (2007).

Title: A geometrical Approach to Differential expression and gene-set
Description: Given expression data this package calculate a multivariate
geometrical characterization of the differential expression and can also
Packaged: 2014-07-30 21:26:23 UTC; Neil Clark