Suggests: testthat (>= 2.1.0), nycflights13, magrittr, shiny, LaF,
readr, rstudioapi, biglm, biglmm, speedglm, broom, ggplot2

readr, rstudioapi, biglm, biglmm, speedglm, broom, ggplot2,

familiar data manipulation paradigms like 'dplyr' verbs and

Suggests: nycflights13, magrittr, shiny, LaF, readr, rstudioapi, biglm,

benchmarkme, purrr (>= 0.3.2), globals, rlang

benchmarkme, purrr (>= 0.3.2), globals, rlang, arrow

Title: A Pipeline to Analyze Resistance and Tolerance from Drug Disk
person("Aleeza", "Gerstein", email="gerst035@umn.edu", role=c("aut", "cre")),
Description: A pipeline to analyze photographs of disk diffusion plates. This removes the need to analyze the plates themselves, and thus analysis can be done separate from the assay. Furthermore, diskImageR removes potential researcher bias, by quantitative assessment of drug resistance as the zone diameter at multiple cutoff values of growth inhibition. This method also extends the disk diffusion assay by measuring drug tolerance (in addition to drug resistance) as the fraction of the subpopulation that is able to grow above the resistance point ("FoG"), and drug sensitivity as the rate of change from no growth to full growth ("slope").
SystemRequirements: ImageJ (all OS), Xcode (Mac)
Packaged: 2016-04-01 18:52:04 UTC; acgerstein

Description: Disc Memoisation for R, enabling faster computation by avoiding repeated re-evaluation of function calls.

Depends: R (>= 2.7.0), rJava (>= 0.5-0), methods, raster, sp
Suggests: rgdal, gbm, splines, XML, ROCR, deldir, gstat, randomForest,
Author: Robert Hijmans, Steven Phillips, John Leathwick and Jane Elith
Description: Functions for species distribution modeling, that is,
predicting entire distributions form occurences at specific

predicting entire geographic distributions form occurences at

Author: Robert J. Hijmans, Steven Phillips, John Leathwick and Jane

Depends: R (>= 2.7.0), methods, raster, rJava (>= 0.5-0)

Depends: R (>= 2.10.0), methods, raster (>= 1.7-0), sp
Suggests: rJava (>= 0.5-0), rgdal, gbm, splines, XML, ROCR, deldir,