Title: Genotype Quality Control with 'PLINK'
person("Hannah", "Meyer", email = "hannah@ebi.ac.uk",
Description: Genotyping arrays enable the direct measurement of an individuals
genotype at thousands of markers. 'plinkQC' facilitates genotype quality
control for genetic association studies as described by Anderson and
colleagues (2010) <doi:10.1038/nprot.2010.116>. It makes 'PLINK' basic
statistics (e.g. missing genotyping rates per individual, allele frequencies
per genetic marker) and relationship functions accessible from 'R' and
generates a per-individual and per-marker quality control report.
Individuals and markers that fail the quality control can subsequently be
removed to generate a new, clean dataset. Removal of individuals based on
relationship status is optimised to retain as many individuals as possible
Imports: methods, optparse, data.table (>= 1.11.0), R.utils, ggplot2,
ggforce, ggrepel, cowplot, UpSetR, dplyr
Author: Hannah Meyer [aut, cre] (<https://orcid.org/0000-0003-4564-0899>)

ggforce, ggrepel, cowplot, UpSetR, dplyr, sys

person("Hannah", "Meyer", email = "hannah.v.meyer@gmail.com",

ggforce, ggrepel, cowplot, UpSetR, dplyr, igraph (>= 1.2.4),

Suggests: testthat, mockery, knitr, rmarkdown

Suggests: testthat, mockery, formatR, knitr, rmarkdown

Description: A set of estimators and tests for panel data
Packaged: Mon Jun 12 18:50:55 2006; yves

Packaged: Mon Oct 30 13:56:23 2006; yves

Author: Yves Croissant <yves.croissant@let.ish-lyon.cnrs.fr>, Giovanni Millo <Giovanni_Millo@Generali.com>
Depends: R (>= 1.8.0), stats, kinship, Matrix
Packaged: Wed Mar 14 12:00:02 2007; yves

Packaged: Mon May 14 17:40:46 2007; yves

Depends: R (>= 1.8.0), stats, kinship, nlme
Packaged: Wed Dec 12 16:34:50 2007; yves

Packaged: Fri Feb 29 11:41:10 2008; yves

Packaged: Wed Jun 25 15:50:32 2008; zeileis

Depends: R (>= 1.8.0), stats, kinship, nlme, Formula
Packaged: Sun Jan  4 14:53:20 2009; zeileis

Depends: R (>= 1.8.0), stats, kinship, nlme, Formula, MASS, sandwich
Packaged: Tue Feb 24 22:31:31 2009; yves