<DOI:10.1214/07-AOAS148>), with adjustments and improvements. The
main function pre() derives prediction rule ensembles consisting of
rules and/or linear terms for continuous, binary, count, multinomial,
and multivariate continuous responses. Function gpe() derives
generalized prediction ensembles, consisting of rules, hinge and linear
Imports: earth, Formula, glmnet, graphics, methods, partykit, rpart,
Suggests: akima, datasets, doParallel, foreach, glmertree, grid,

Imports: earth, Formula, glmnet, graphics, methods, partykit (>=
1.2-0), rpart, stringr, survival, Matrix, MatrixModels

mlbench, testthat, mboost, ggplot2, caret, pROC, knitr,

Suggests: interp, datasets, doParallel, foreach, glmertree, grid,

Title: Diagnostics to Assess the Effects of Text Preprocessing
Author: Matthew J. Denny <mdenny@psu.edu>, Arthur Spirling
Description: Functions to assess the effects of different text preprocessing decisions on the inferences drawn from the resulting document-term matrices they generate.
Imports: quanteda, gridExtra, ggplot2, vegan, grid, parallel,
topicmodels, cowplot, ecodist, proxy, reshape2
Packaged: 2016-10-08 11:43:10 UTC; matthewjdenny

Imports: quanteda, ggplot2, vegan, grid, parallel, topicmodels,
Packaged: 2017-05-26 03:00:49 UTC; matthewjdenny

Packaged: 2017-07-08 05:30:59 UTC; matthewjdenny

Packaged: 2017-11-14 04:39:57 UTC; matthewjdenny

Packaged: 2018-01-12 17:03:48 UTC; matthewjdenny

Title: Safety Diagnostics for Dose-Escalation Trial Designs
Suggests: knitr, rmarkdown, bookdown, tufte, kableExtra, testthat
Description: Enhances various R packages that support the design and simulation
of phase 1 dose-escalation trials, adding diagnostics to examine
the safety characteristics of these designs in light of expected
inter-individual variation in pharmacokinetics and pharmacodynamics.
See Norris (2020), "Retrospective analysis of a fatal dose-finding

Imports: methods, dplyr, rlang, stringr, knitr, kableExtra
Suggests: rmarkdown, bookdown, tufte, testthat

Depends: magrittr, escalation, data.table, R (>= 2.10)
Suggests: rmarkdown, bookdown, tufte, testthat, lattice, latticeExtra