Author: E. Andres Houseman, Sc.D. and Devin C. Koestler, Ph.D.
Recursively Partitioned Mixture Model for Beta and Gaussian Mixtures.
This is a model-based clustering algorithm that returns a hierarchy
of classes, similar to hierarchical clustering, but also similar to

Title: Reverse-Phase Protein Array Super Position and Concentration
Maintainer: James M. Melott <jmmelott@mdanderson.org>
Description: Provides tools for the analysis of reverse-phase protein arrays (RPPAs), which are also known as "tissue lysate arrays" or simply "lysate arrays". The package's primary purpose is to input a set of quantification files representing dilution series of samples and control points taken from scanned RPPA slides and determine a relative log concentration value for each valid dilution series present in each slide and provide graphical visualization of the input and output data and their relationships. Other optional features include generation of quality control scores for judging the quality of the input data, spatial adjustment of sample points based on controls added to the slides, and various types of normalization of calculated values across a set of slides. The package was derived from a previous package named SuperCurve. For a detailed description of data inputs and outputs, usage  information, and a list of related papers describing methods used in the package please review the vignette "Guide_to_RPPASPACE". Hu (2007) <doi:10.1093/bioinformatics/btm283>.
Depends: R (>= 3.50), methods, doParallel, foreach, parallel, iterators
Imports: utils, grDevices, graphics, stats, MASS, cobs, imager, bmp,
jpeg, tiff, png, splines, robustbase, mgcv, quantreg
Suggests: timeDate, boot, knitr, rmarkdown

Depends: R (>= 3.5.0), methods, doParallel, foreach, parallel,
Imports: utils, grDevices, graphics, stats, bmp, jpeg, tiff, png,
imager, MASS, cobs, splines, nlme, robustbase, mgcv, SparseM,

Title: Resolvable partially pairwise balanced design and Space-filling
Author: Mohamed Laib, Imane Rezgui and Zebida Gheribi-Aoulmi
Description: Using some association schemes to obtain a new series of resolvable partially pairwise balanced designs (RPPBD) and space-filling designs.