Imports: Rcpp, filesstrings (>= 1.1.0), magrittr, readr, reshape2,
R.utils, autothresholdr, abind, viridis, dplyr, matrixStats,
BiocParallel, stringr, EBImage, RSAGA, ggplot2, grDevices,
RcppRoll, tibble, purrr, hexbin, ore, DescTools

Imports: Rcpp, filesstrings (>= 2.2.0), magrittr, autothresholdr (>=
1.2.0), dplyr, stringr, purrr, checkmate, detrendr (>= 0.5.0),
Suggests: knitr, rmarkdown, covr, testthat, tidyverse, abind

Description: Calculation of molecular number and brightness from
fluorescence microscopy image series. The software was published in a 2016
paper <doi:10.1093/bioinformatics/btx434>. The seminal paper for the
technique is Digman et al. 2008 <doi:10.1529/biophysj.107.114645>. A review
of the technique was published in 2017 <doi:10.1016/j.ymeth.2017.12.001>.
Imports: Rcpp, filesstrings (>= 3.0.0), magrittr, autothresholdr (>=
1.3.0), dplyr, stringr, purrr, checkmate, detrendr (>= 0.6.0),
ijtiff (>= 1.5.0), rlang, stats, MASS, reshape2, viridis, glue,
Suggests: knitr, rmarkdown, covr, testthat, abind, clipr, ore (>=
1.4.0), styler, tidyr, mgcv, gridExtra, pacman, matrixStats,

Imports: Rcpp, filesstrings (>= 3.1.1), magrittr, autothresholdr (>=
1.3.1), dplyr, stringr, purrr, checkmate (>= 1.9.1), detrendr
viridis, glue (>= 1.3.0), BBmisc, ggplot2, assertthat, utils
Suggests: knitr, rmarkdown, covr, testthat (>= 2.1.0), abind, tidyr,

Imports: Rcpp (>= 1.0.1), filesstrings (>= 3.1.3), magrittr (>= 1.5),
autothresholdr (>= 1.3.3), dplyr, stringr (>= 1.2.0), purrr,
rlang (>= 0.3.3), reshape2, viridis, glue (>= 1.3.0), BBmisc,
ggplot2, assertthat, withr (>= 2.1.0), utils
gridExtra, pacman, matrixStats (>= 0.50.0), spelling

Imports: Rcpp (>= 1.0.1), filesstrings (>= 3.1.5), magrittr (>= 1.5),

fluorescence microscopy image series. The software was published in a
2016 paper <doi:10.1093/bioinformatics/btx434>. The seminal paper for
the technique is Digman et al. 2008 <doi:10.1529/biophysj.107.114645>.
A review of the technique was published in 2017
Imports: assertthat, autothresholdr (>= 1.3.3), BBmisc, checkmate (>=
purrr, Rcpp (>= 1.0.1), reshape2, rlang (>= 0.3.3), stringr (>=
Suggests: abind, covr, gridExtra, knitr, matrixStats (>= 0.50.0),
pacman, rmarkdown, spelling, testthat (>= 2.1.0), tidyr