Title: Squared extrapolation methods for accelerating fixed-point
Description: Algorithms for accelerating the convergence of slow,
monotone sequences from smooth, contraction mapping such as the
EM algorithm. It can be used to accelerate any smooth, linearly
convergent acceleration scheme.  A tutorial style introduction
to this package is available in a vignette on the CRAN download
page or, when the package is loaded in an R session, with
Maintainer: Ravi Varadhan <rvaradhan@jhmi.edu> and Paul Gilbert

Title: Squared Extrapolation Methods for Accelerating EM-Like Monotone

vignette("SQUAREM"). Refer to the J Stat Software article: <doi:10.18637/jss.v092.i07>.

Packaged: 2020-06-04 16:47:42 UTC; rvaradhan

Packaged: 2020-08-25 15:22:56 UTC; rvaradhan

Packaged: 2020-10-21 20:02:12 UTC; rvaradhan

Packaged: 2021-01-12 23:59:02 UTC; rvaradhan

Title: Statistical Ranking Color Scheme for Multiple Pairwise
Description: Implementation of the SRCS method for a color-based visualization of the
results of multiple pairwise tests on a large number of problem configurations, proposed in:
I.G. del Amo, D.A. Pelta. SRCS: a technique for comparing multiple algorithms under several
factors in dynamic optimization problems. In: E. Alba, A. Nakib, P. Siarry
(Eds.), Metaheuristics for Dynamic Optimization. Series: Studies in
Computational Intelligence 433, Springer, Berlin/Heidelberg, 2012.

Imports: parallel, graphics, stats, grDevices, methods

Title: SRMA Analysis of Array-based Sequencing Data
Author: Wenyi Wang <wwang7@mdanderson.org>, Nianxiang Zhang
aroma.core,aroma.affymetrix, splines, MASS, methods, mclust,
Description: SRMA is an R package for sequence base calling using
Affymetrix custom resequencing arrays. It includes R
implementations of the Sequencing Robust Multi-array Analysis
methods that were developed to accurately identify all single
nucleotide variants in candidate gene sequences.
Packaged: 2012-02-17 22:25:09 UTC; wenyiwang

Packaged: 2012-04-13 03:23:44 UTC; wenyiwang

Imports:  utils, filehash, cacheSweave, stashR
Collate:  author.R reader.R html.R zzz.R
Title:  Shared Reproducibility Package Management
Description:  A package development and management system for distributed reproducible research
Packaged: Thu May  3 16:45:59 2007; rpeng