Title: Creates, Merges, and Reads Binary Dosage Files
Description: Tools to create binary dosage from either VCF
or GEN files, merge binary dosage files, and read
Suggests: knitr, rmarkdown, testthat (>= 2.1.0), covr

Title: Variable Selection for Binary Data Using the EM Algorithm
Authors@R: person("John", "Snyder", email = "jcs8v6@mail.missouri.edu", role = c("aut", "cre"))
Description: Implements variable selection for high dimensional datasets with a binary response
variable using the EM algorithm.  Both probit and logit models are supported.  Also included
is a useful function to generate high dimensional data with correlated variables.

Title: Mean and Variance Modeling of Binary Data
Maintainer: David M. Smith <david.m.smith@truvenhealth.com>
Description: Modeling under- and over-dispersed binary data using extended Poisson process models (EPPM).

Imports: Formula, expm, numDeriv, stats, lmtest, grDevices, graphics

Maintainer: David M. Smith <smithdm1@us.ibm.com>
Description: Modeling under- and over-dispersed binary data using extended Poisson process models (EPPM) as in the article MJ Faddy and DM Smith (2012) <doi:10.1002/bimj.201100214> .

Description: Modeling under- and over-dispersed binary data using extended Poisson process models (EPPM) as in the article Faddy and Smith (2012) <doi:10.1002/bimj.201100214> .

Packaged: 2019-07-30 21:53:30 UTC; DavidSmith

Title: Threshold Cut Point of Probability for a Binary Classifier Model
Description: Allows to view the optimal probability cut-off point at which the Sensitivity and Specificity meets and its a best way to minimize both Type-1 and Type-2 error for a binary Classifier in determining the Probability threshold.

Title: Interactive Circular Visualization of Genomic Data using
Authors@R: c(person("Loan", "Vulliard", email = "lvulliard@cemm.at", role = c("trl", "cre")),
person("Xiaowei", "Chen", email = "chenxiaowei@moon.ibp.ac.cn", role = c("aut")),
person("Ya", "Cui", email = "cui_ya@163.com", role = c("aut")))
Description: Implement in 'R' interactive Circos-like visualizations of genomic data, to map information
such as genetic variants, genomic fusions and aberrations to a circular genome, as proposed by the
'JavaScript' library 'BioCircos.js', based on the 'JQuery' and 'D3' technologies.
Imports: RColorBrewer, htmlwidgets, jsonlite, plyr, grDevices
Packaged: 2017-12-20 15:58:48 UTC; lvulliard