Title: Visualization Of Functional Analysis Data
categories (circle plot, chord plot, cluster plot).
Depends: ggplot2, ggdendro, grid, gridExtra, RColorBrewer, R (>= 3.0.3)

Description: A package to visualise Gene Ontology (GO) enrichment
analysis results on gene lists arising from different analyses
such clustering or PCA. The significant GO categories are
visualised as word clouds that can be combined with different
Title: Word cloud summaries of GO enrichment analysis
Imports: plyr, grid, gProfileR, reshape2, limma, gtable

Description: A package to visualise Gene Ontology (GO) enrichment analysis
results on gene lists arising from different analyses such clustering or
PCA. The significant GO categories are visualised as word clouds that can
be combined with different plots summarising the underlying data.
X-CRAN-Comment: This package is now available from Bioconductor 3.0 and

Title: Structural Exploration of the Gene Ontology (GO) Knowledge Base
Author: Kalifa Manjang, Frank Emmert-Streib, Shailesh Tripathi, Olli Yli-Harja, Matthias Dehmer
Description: It provides an effective, efficient, and fast way to explore the Gene Ontology (GO).
Given a set of genes, the package contains functions to assess the GO and obtain the
terms associated with the genes and the levels of the GO terms. The package provides
functions for the three different GO ontology. We discussed the methods explicitly in
Imports: GO.db, igraph, network, ggnetwork, dplyr, biomaRt, annotate,

Imports: igraph, network, ggnetwork, dplyr, biomaRt, annotate, graphics
Depends: R (>= 2.10), ggplot2, GO.db, gontr

Imports: igraph, network, dplyr, biomaRt, annotate, graphics, ggplot2
Depends: R (>= 2.10), GO.db, gontr, ggraph

Description:  Gradient Projection Algorithm Rotation for Factor Analysis.
License: GPL Version 2. See the LICENSE file for details.
Author: Coen Bernaards and Robert Jennrich
Maintainer: Paul Gilbert and Coen Bernaards <pgilbert@bank-banque-canada.ca>
Packaged: Fri Jan 21 12:06:40 2005; gilp

Packaged: Mon Jan 31 15:03:21 2005; paul