Title: Compute Node Overlap and Segregation in Ecological Networks
Author: Thomas J. Matthews and Giovanni Strona
Maintainer: Thomas J. Matthews <txm676@gmail.com>
Description: Calculate NOS (node overlap and segregation) and
the associated metrics described in Strona and
(2017; In Press, DOI to be provided in subsequent package version).
The functions provided in the package enable assessment of
structural patterns ranging from complete node segregation to perfect
nestedness in a variety of network types. In addition, they provide a

the associated metrics described in Strona and Veech (2015)

Package: nose
Type: Package
Title: nose Package for R
Version: 1.0
Date: 2012-12-04
Author: originally written by Subbiah M <sisufive@gmail.com> packaged
by Sumathi R with considerable contributions by Srinivasan M R
Maintainer: Sumathi R <sumathimr@yahoo.co.in>
Description: The nose package consists of a collection of three
functions for classifying sparseness in typical 2 x 2 data sets
with at least one cell should have zero count. These functions
are based on the three widely applied summary measures for 2 x
2 categorical data viz, Risk Difference (RD), Relative Risk
(RR), Odds Ratio (OR). This package helps to identify suitable
continuity correction for zero cells when a multi centre
analysis or a meta analysis is carried out. Further, it can be
considered as a tool for sensitivity analysis for adding a
continuity correction and to identify the presence of Simpson's
paradox.
License: GPL-2
Packaged: 2012-12-04 06:41:53 UTC; Administrator
Repository: CRAN
Date/Publication: 2012-12-19 11:39:43

Title: A Forward Agent-Based Transmission Chain Simulator
Authors@R: c(person("Sebastian", "Lequime", email = "sebastian.lequime@gmail.com",
person("Paul", "Bastide", email = "paul.bastide@kuleuven.be",
person("Simon", "Dellicour", email = "simon.dellicour@kuleuven.be",
person("Philippe", "Lemey", email = "philippe.lemey@kuleuven.be",
person("Guy", "Baele", email = "guy.baele@kuleuven.be",
Description: The aim of 'nosoi' (pronounced no.si) is to provide a flexible agent-based stochastic transmission chain/epidemic simulator (Lequime et al. in prep). It is named after the daimones of plague, sickness and disease that escaped Pandora's jar in the Greek mythology. 'nosoi' is able to take into account the influence of multiple variable on the transmission process (e.g. dual-host systems (such as arboviruses), within-host viral dynamics, transportation, population structure), alone or taken together, to create complex but relatively intuitive epidemiological simulations.
Suggests: testthat (>= 2.1.0), knitr, rmarkdown, igraph, tidyverse,
ggplot2, ggnetwork, intergraph, viridis, gganimate, gifski,
Author: Sebastian Lequime [aut, cre] (<https://orcid.org/0000-0002-3140-0651>),