Package: EpiSignalDetection
Type: Package
Title: Signal Detection Analysis
Version: 0.1.0
Date: 2018-10-29
Authors@R: c(
person( given = "Lore", family = "Merdrignac",
role = c("aut", "ctr"), email = "l.merdrignac@epiconcept.fr", comment = "Author of the package and original code"),
person( given = "Joana", family = "Gomes Dias",
role = c("aut", "fnd", "cre"), email = "joana.gomes.dias@ecdc.europa.eu", comment = "Project manager and package maintainer"),
person( given = "Esther", family = "Kissling",
role = c("aut", "ctr"), email = "e.kissling@epiconcept.fr"),
person( given = "Tommi", family = "Karki",
role = c("aut", "fnd"), email = "tommi.karki@ecdc.europa.eu"),
person( given = "Margot", family = "Einoder-Moreno",
role = c("ctb", "fnd"), email = "margot.einoder-moreno@ecdc.europa.eu"))
Description: Exploring time series for signal detection. It is specifically designed
to detect possible outbreaks using infectious disease surveillance data
at the European Union / European Economic Area or country level.
Automatic detection tools used are presented in the paper
"Monitoring count time series in R: aberration detection in public health surveillance",
by Salmon et al. (2016) <doi:10.18637/jss.v070.i10>.
The package includes:
- Signal Detection tool, an interactive 'shiny' application
in which the user can import external data and perform basic signal detection analyses;
- An automated report in HTML format, presenting the results of the time series analysis in tables and graphs.
This report can also be stratified by population characteristics (see 'Population' variable).
This project was funded by the European Centre for Disease Prevention and Control.
Depends: R (>= 3.4.0)
License: EUPL
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.0
Imports: shiny, dplyr, pander, DT, surveillance, ISOweek, ggplot2,
graphics, utils, knitr (>= 1.20), rmarkdown
VignetteBuilder: knitr
URL: http://atlas.ecdc.europa.eu/public/index.aspx
NeedsCompilation: no
Packaged: 2018-11-05 11:02:59 UTC; LMC
Author: Lore Merdrignac [aut, ctr] (Author of the package and original code),
Joana Gomes Dias [aut, fnd, cre] (Project manager and package
maintainer),
Esther Kissling [aut, ctr],
Tommi Karki [aut, fnd],
Margot Einoder-Moreno [ctb, fnd]
Maintainer: Joana Gomes Dias <joana.gomes.dias@ecdc.europa.eu>
Repository: CRAN
Date/Publication: 2018-11-14 11:10:12 UTC