grDevices, graphics, stats, truncnorm, foreach, MASS
Suggests: EGRETci, knitr, rmarkdown, extrafont, testthat, rkt,
doParallel, parallel, pkgdown, png, dplyr, zyp, lubridate, covr

Title: Exploration and Graphics for RivEr Trends (EGRET) Confidence
Description: Collection of functions to evaluate uncertainty of results from water quality analysis using the Weighted Regressions on Time Discharge and Season (WRTDS) method. This package is an add-on to the EGRET package that performs the WRTDS analysis.
Imports: EGRET (>= 2.1.1), binom, lubridate, stats, graphics
Suggests: knitr, testthat, foreach, doParallel, iterators, rmarkdown

Description: Collection of functions to evaluate uncertainty of results from
water quality analysis using the Weighted Regressions on Time Discharge and
Season (WRTDS) method. This package is an add-on to the EGRET package that
Imports: EGRET(>= 2.1.1), binom, lubridate, stats, graphics

Imports: EGRET(>= 3.0.0), binom, stats, graphics, utils
Suggests: knitr, testthat, doParallel, iterators, rmarkdown

Title: Exploration and Graphics for RivEr Trends Confidence Intervals
Authors@R: c(person("Laura", "DeCicco", role = c("aut","cre"),
person("Robert", "Hirsch", role = c("aut"),
performs the WRTDS analysis. The WRTDS modeling
method was initially introduced and discussed in Hirsch et al. (2010) <doi:10.1111/j.1752-1688.2010.00482.x>,
and expanded in Hirsch and De Cicco (2015) <doi:10.3133/tm4A10>. The
paper describing the uncertainty and confidence interval calculations
Author: Laura DeCicco [aut, cre] (<https://orcid.org/0000-0002-3915-9487>),

Imports: EGRET(>= 3.0.5), binom, stats, graphics, utils
Suggests: knitr, testthat, doParallel, iterators, rmarkdown, pkgdown,

Title: Ensemble Gene Regulatory Network Inference
Authors@R: c(person("Chiranjib", "Sarkar", role = c("aut","cre","ctb"),email="cschiranjib9@gmail.com",comment=c(ORCID="0000-0003-1536-7449")),
person("Dipayan", "Sarkar", role = c("aut"),email="dipayansarkar26@gmail.com",comment=c(ORCID="0000-0002-0765-5689")),
person("Rajender", "Parsad", role = c("aut"),email="Rajender.Parsad@icar.gov.in"),
person("Dwijesh", "Mishra", role = c("aut"),email="dwij.mishra@gmail.com",comment=c(ORCID="0000-0002-3327-6156")))
Author: Chiranjib Sarkar [aut, cre, ctb]
Description: Gene regulatory network constructed using combined score obtained from
individual network inference method. The combined score measures the significance
of edges in the ensemble network. Fisher's weighted method has been implemented to
combine the outcomes of different methods based on the probability values.
The combined score follows chi-square distribution with 2n degrees of freedom. <doi:10.22271/09746315.2020.v16.i3.1358>.
Imports: fdrtool, gdata, MASS, readr, stats