Title: Various Methods for Estimating Intrinsic Dimension
Description: An implementation of various methods for estimating intrinsic
dimension of vector-valued dataset or distance matrix. Most methods implemented
are based on different notion of fractal dimension such as the capacity
dimension, the box-counting dimension, and the information dimension.

Title: Idiograms with Marks and Karyotype Indices
Authors@R: c(person("Fernando", "Roa", email = "froao@unal.edu.co", role = c("aut", "cre") ),
person(given="Mariana PC Telles", email = "", role = c("ctb"))
Description: Plot idiograms of several karyotypes having a set of dataframes for chromosome data
and optionally mark data. Includes also a function to plot holocentrics and its marks supporting
micrometers and Mb. Marks can have square or dot form, its legend (label) can be drawn inline
or to the right of karyotypes. It is possible to calculate
karyotype indices of Watanabe et al. (1999) <doi:10.1007/PL00013869> and
Romero-Zarco (1986) <doi:10.2307/1221906> and classify chromosomes by morphology Guerra (1986) and Levan et al. (1964).

Suggests: ggpubr, ggtree, phytools, ggplot2, treeio, knitr, kableExtra,
VignetteBuilder: knitr, kableExtra, prettydoc, rmarkdown, RCurl,

Description: Plot idiograms of several karyotypes having a set of data.frames for chromosome data
and optionally mark data. Supports micrometers and Mb. Marks can have square or dot form,
its legend (label) can be drawn inline or to the right of karyotypes. It is possible to
calculate chromosome indices by Levan et al. (1964) <doi:10.1111/j.1601-5223.1964.tb01953.x>,
karyotype indices of Watanabe et al. (1999) <doi:10.1007/PL00013869> and Romero-Zarco (1986)
<doi:10.2307/1221906> and classify chromosomes by morphology Guerra (1986) and Levan et al.
prettydoc, rvcheck, badger, rmarkdown, RCurl

Description: Plot idiograms of karyotypes, plasmids, circular chr. having a set of data.frames
for chromosome data and optionally mark data.
Seven styles of marks are available: square, dots, cM, cMLeft, cenStyle, upArrow, downArrow;
its legend (label) can be drawn inline or to the right of karyotypes. Idiograms can also be plotted in
concentric circles. It is possible to calculate chromosome indices by Levan et al. (1964)
<doi:10.1007/PL00013869> and Romero-Zarco (1986) <doi:10.2307/1221906> and classify chromosomes
by morphology Guerra (1986) and Levan et al. (1964).
Suggests: plyr, ggpubr, ggtree, phytools, ggplot2, treeio, knitr,
kableExtra, prettydoc, rvcheck, badger, rmarkdown, RCurl,
VignetteBuilder: plyr, knitr, kableExtra, prettydoc, rmarkdown, RCurl,