person("Ionas", "Erb", email = "ionas.erb@crg.eu", role = "aut"),
Imports: fastcluster, ggplot2, grDevices, igraph, Rcpp, stats, utils
Suggests: ALDEx2, cccrm, compositions, data.table, datasets,
directlabels, grid, ggdendro, knitr, limma, plotly, reshape2,

implements several metrics for proportionality, including
phi [Lovell et al (2015) <DOI:10.1371/journal.pcbi.1004075>] and
rho [Erb and Notredame (2016) <DOI:10.1007/s12064-015-0220-8>]. This package also
implements several metrics for differential proportionality. Unlike correlation,
these measures give the same result for both relative and absolute data.

correlation-based analyses. However, correlation lacks validity when
applied to relative data, including count data generated by next-generation
sequencing. This package implements several metrics for proportionality, including
Suggests: ALDEx2, Biobase, cccrm, compositions, data.table, datasets,
grid, ggdendro, knitr, limma, plotly, reshape2, rgl, rmarkdown,

person("Greg", "Gloor", email = "ggloor@uwo.ca", role = "ctb"),
person("Ryan", "Moore", email = "rmm1047@gmail.com", role = "ctb")
grid, ggdendro, knitr, limma, parallel, plotly, reshape2, rgl,

Title: Tests of the Proportional Hazards Assumption
Description: Tests of the proportional hazards assumption in the Cox
model: data-driven Neyman type smooth tests and score process based
tests for identifying nonproportional covariates.
Packaged: Tue Sep  5 11:37:59 2006; david

Packaged: Mon Sep 25 23:28:52 2006; david

tests for identifying nonproportional covariates and for global
Packaged: Fri Dec 21 00:03:13 2007; david

Packaged: Thu Feb 28 12:55:45 2008; david

model: data-driven Neyman type smooth tests and score process
based tests for identifying nonproportional covariates and for

Title: Miscellaneous functions for processing and sample selection of
Author: Antoine Stevens and Leonardo Ramirez-Lopez
Description: The package provides functions for pretreatment and sample
selection of visible and near infrared diffuse reflectance spectra

Imports: foreach, iterators, Rcpp (>= 0.11.0)