Title: Functions and Data Sets for 'Applied Predictive Modeling'
Description: A few functions and several data set for the Springer book
Depends: R (>= 2.10), CORElearn, MASS, plyr, reshape2

Description: A few functions and several data set for the Springer book 'Applied Predictive Modeling'

Imports: CORElearn, MASS, plyr, reshape2
Suggests: caret (>= 6.0-22), lattice, ellipse

Description: A few functions and several data set for the Springer book 'Applied Predictive Modeling'.
Imports: CORElearn, MASS, plyr, reshape2, lattice, ellipse

Title: Aquaculture Breeding Program Simulation
Description: Breeding programs can be simulated with this package. The functions are written to simulate production and reproduction systems encountered in aquaculture and are easy to combine with custom functions. Simulating breeding programs is useful to predict the expected genetic gain, rate of inbreeding and the effect of changes in the breeding program. AquaBPsim does not simulate genome wide-markers and QTLs, but it simulates estimated breeding values as values correlated to the true breeding values. The correlation equals the accuracy, which can be provided or calculated using deterministic formulas. For genomic selection, the accuracy can be calculate using the formula of Deatwyler et al. (2010) <doi:10.1534/genetics.110.116855>. Without genomic selection, accuracy can be calculated with the selection index method (Mrode, 2014. ISBN:978-1-84593-981-6).
Imports: matlib, MASS, pedigree, readxl, stats

Package: AquaEnv
Version: 0.7
Date: 2009-03-24
Title: AquaEnv - an integrated development toolbox for aquatic chemical
model generation
Author: Andreas F. Hofmann, Karline Soetaert, Filip J.R. Meysman
Maintainer: Andreas F. Hofmann <a.hofmann@nioo.knaw.nl>
Depends: minpack.lm, deSolve, seacarb
Description: AquaEnv is an integrated development toolbox for aquatic
chemical model generation focused on (ocean) acidification and
CO2 air-water exchange. It contains all elements necessary to
model the pH, the related CO2 air-water exchange, as well as
aquatic acid-base chemistry in general for an arbitrary marine,
estuarine or freshwater system. Also chemical batches can be
modelled. Next to the routines necessary to calculate desired
information, AquaEnv also contains a suite of tools to
visualize this information. Furthermore, AquaEnv can not only
be used to build dynamic models of aquatic systems, but it can
also serve as a simple desktop tool for the experimental
aquatic chemist to generate and visualize all possible derived
information from a set of measurements with one single easy to
use R function. Additionally, the sensitivity of the system to
variations in the input variables can be visualized.
License: GPL (>= 2)
LazyData: yes
Packaged: Tue Mar 31 12:30:54 2009; andreash
Repository: CRAN
Date/Publication: 2009-03-31 18:25:59