Package: Rknots
Type: Package
Title: Rknots
Version: 1.1
Date: 2011-09-01
Depends: R (>= 2.12.0), rgl, rSymPy
Suggests: bio3d
Author: Federico Comoglio and Maurizio Rinaldi
Maintainer: Federico Comoglio <federico.comoglio@bsse.ethz.ch>
Description: The Rknots package contains functions for the topological
analysis of polymeric structures, either biological polymers or
synthetic structures, with a major focus on proteins. This
release provides a Protein Data Bank (PDB) entries import
function, two structure reduction algorithms (MSR, Minimal
Structure Reduction and Alexander-Briggs reduction),
polynomials (Alexander, Jones and HOMFLY polynomial via
Conway's skein triple) and linking number computation,
graphical functions and a set of utilities. Credits are due to
the bio3d package on which the PDB import function is based, to
the google code project SymPy that provides a Computer Algebra
System for Python and to the Rsympy package.
License: GPL-2
LazyLoad: yes
Packaged: 2011-09-05 21:04:34 UTC; comoglif
Repository: CRAN
Date/Publication: 2011-09-06 08:48:45

Depends: R (>= 2.14.0), methods, rgl, rSymPy
analysis of polymers, with a major focus on proteins. Notice
that Rknots depends on the package bio3d (it can be downloaded

analysis of polymers, with a major focus on proteins.

Title: Topological Analysis of Knotted Proteins, Biopolymers and 3D
Depends: R (>= 2.14.0), methods, rgl, rSymPy, bio3d
Description: The Rknots package contains functions for the topological analysis of polymers, with a focus on protein structures.

Description: Contains functions for the topological analysis of polymers, with a focus on protein structures.

Title: Functions and Datasets Required for ST370 class
Author: Dennis D. Boos, Atina Dunlap Brooks, Douglas Nychka
Maintainer: Atina Dunlap Brooks <adbrook2@stat.ncsu.edu>
Description: Functions and Datasets Required for ST370 class
Packaged: Sat Jan 15 06:34:28 2005; User

Packaged: Wed Dec  7 15:48:44 2005; atbroo

Packaged: Mon Feb 23 11:11:45 2009; hornik

Packaged: Mon Dec 11 16:52:15 2006; atbroo