Title: Tools for OmniLog(R) Phenotype Microarray data
Author: Markus Goeker, with contributions by Lea Vaas, Johannes
Sikorski, Nora Buddruhs and Anne Fiebig (e-mail:
Suggests: testthat, yaml (>= 2.1.3), multicore, optparse, gplots
Description: Tools for analysing OmniLog(R) Phenotype Microarray (PM)
data as produced by the device distributed by BiOLOG Inc.,
including plotting, aggregating (estimating curve parameters)
and comparing PM data, integrating metadata, using the YAML
format for the storage of data and metadata, and batch
Collate: 'well-map.R' 'constants.R' 'helpers.R' 'numeric.R' 'phylo.R'
'wmd.R' 'opm.R' 'opma.R' 'opms.R' 'opmx.R' 'matrix.R' 'list.R'

Title: Tools for analysing OmniLog(R) Phenotype Microarray data

Author: Markus Goeker, with contributions by Benjamin Hofner, Lea A.I.
Vaas, Johannes Sikorski, Nora Buddruhs and Anne Fiebig
Imports: methods, lattice, parallel, boot, hwriter, plotrix,
Ckmeans.1d.dp, pkgutils (>= 0.3-0), yaml (>= 2.1.7), splines,
Suggests: optparse, gplots, opmdata (>= 0.4-0), testthat, multcomp
Description: Tools for analysing OmniLog(R) and Microstation Phenotype
Microarray (PM) data as produced by the devices distributed by
BIOLOG Inc., including plotting, aggregating (estimating curve
parameters), comparing and discretizing PM data, creating
phylogenetic formats and reports for taxonomic journals,
running multiple comparisons of means, integrating metadata,
using the YAML format for the storage of data and metadata, and
batch conversion of large numbers of files.
Collate: 'substrate-info.R' 'well-map.R' 'plate-map.R' 'imports.R'
'package.R' 'constants.R' 'classes.R' 'auxiliary.R' 'kmeans.R'
'io.R' 'phylogeny.R' 'data.R' 'testing.R' 'multcomp.R'

Imports: methods, lattice, boot, hwriter
Suggests: testthat, yaml (>= 2.1.3), multicore, optparse, gplots,
including plotting, aggregating (estimating curve parameters),
comparing and discretizing PM data, creating phylogenetic
formats and reports for taxonomic journals, integrating
metadata, using the YAML format for the storage of data and
metadata, and batch conversion of large numbers of files.
Collate: 'well-map.R' 'constants.R' 'helpers.R' 'numeric.R' 'wmd.R'
'opm.R' 'opma.R' 'opms.R' 'opmx.R' 'matrix.R' 'list.R' 'yaml.R'