Packaged: 2017-07-09 22:49:03 UTC; paulgovan

Title: Automated Hierarchical Multiple Regression with Assumptions
Description: A set of functions that automates the process and produces reasonable output for hierarchical multiple regression models.  It allows you to specify predictor blocks, from which it generates all of the linear models, and checks the assumptions of the model, producing the requisite plots and statistics to allow you to judge the suitability of the model.
Imports: lmtest, car, MASS, broom, rowr, ROCR, dplyr, BaylorEdPsych,

Title: Automated Transcriptome Classifier Pipeline: Comprehensive
Authors@R: c(person("Karam", "Daka", role = c("cre","aut"),
Description: An unsupervised fully-automated pipeline for transcriptome analysis or a supervised option to identify characteristic genes from predefined subclasses.
We rely on the 'pamr' <http://www.bioconductor.org/packages//2.7/bioc/html/pamr.html> clustering algorithm to cluster the Data and then draw a heatmap of the clusters with the most significant genes and the
least significant genes according to the 'pamr' algorithm. This way we get easy to grasp heatmaps that show us for each cluster which are the clusters most defining genes.
Imports: cluster ,pamr ,siggenes ,annotate ,fgsea ,org.Hs.eg.db

Description: Automated multi-path General-to-Specific (GETS) model selection of the mean and volatility specification of a power log-ARCH model

Title: General-to-Specific (GETs) Model Selection
Description: Multi-path General-to-Specific (GETS) model selection of the mean and log-volatility specifications of a power log-ARCH model

Title: General-to-Specific (GETS) Model Selection
Description: Automated Multi-path General-to-Specific (GETS) model
selection of the mean and log-volatility specifications of a

Depends: R (>= 2.4.1), zoo, gets, lgarch
Description: Automated multi-path General-to-Specific (GETS) model selection of either an AR-X model with log-ARCH-X errors, or of a log-ARCH-X model of the error. NOTE: The package has been succeeded by the package gets, also available on the CRAN, which is intended to be more user-friendly, faster and easier to extend. AutoSEARCH will continue to be maintained, but the development focus will switch to gets. Users are therefore encouraged to consider gets instead.