Description: Detect abrupt changes in time series with local fluctuations as a random walk process and autocorrelated noise as an AR(1) process. See Romano, G., Rigaill, G., Runge, V., Fearnhead, P. (2021) <doi:10.1080/01621459.2021.1909598>.
Imports: Rcpp (>= 1.0.0), ggplot2, robustbase

Title: Estimates Pseudotimes for Single Cell Expression Data
Description: Implements the DeLorean model to estimate pseudotimes for
single cell expression data. The DeLorean model uses a Gaussian process
latent variable model to model uncertainty in the capture time of
coda, parallel, functional, kernlab, fastICA, seriation,
Suggests: knitr (>= 1.8), knitcitations, rmarkdown, formatR, extrafont,

Imports: rstan (>= 2.9.0), dplyr (>= 0.4.3), reshape2 (>= 1.4), stringr
parallel, functional, kernlab, fastICA, seriation, memoise

Description: Implements the DeLorean model (Reid & Wernisch (2016)
<doi:10.1093/bioinformatics/btw372>) to estimate pseudotimes for

(>= 7.3), broom, coda, parallel, functional, kernlab, fastICA,

Title: Zero Coupon Yield Curve Modelling
Description: Modeling the zero coupon yield curve using the dynamic De Rezende and
Ferreira (2011) <doi:10.1002/for.1256> five factor model with variable
or fixed decaying parameters. For explanatory purposes, the package also
includes various short datasets of interest rates for the BRICS countries.

Authors@R: c(person("Nan", "Zhang", email = "15776658849@163.com", role = "cre"), person("YaKun", "Zhang", email = "15776452861@163.com", role = "aut"))
Description: Dealing GPL570 (Affymetrix Human Genome U133 Plus 2.0 Array) RAW.tar file using the robust multi-array average expression measure and returning expression profile.
Imports: dplyr, stringr, GEOquery, affy, tibble
Suggests: BiocGenerics, knitr, rmarkdown, spelling

Title: Implementation of Multi Objective Decision Analysis
Description: Aides in the multi objective decision analysis process by simplifying
the creation of value hierarchy tree plots, calculating and plotting single and
multi attribute value function scores, and conducting sensitivity analysis. Linear,
exponential, and categorical single attribute value functions are supported. For
Imports: stats, ggplot2, tidyr, dplyr, graphics, data.tree, gridExtra,