Title: Interactive Document for Working with Goodness of Fit Analysis
Description: An interactive document on  the topic of goodness of fit analysis using 'rmarkdown' and 'shiny' packages. Runtime examples are provided in the package function as well as at  <https://predanalyticssessions1.shinyapps.io/ChiSquareGOF/>.
Packaged: 2019-07-27 18:02:09 UTC; KARTIKEYA

Description: Accounting for genes' functional-non-equivalence within pathways in classical Gene-set-analysis.

Title: Fit Generalized Odds Rate Mixture Cure Model with Interval
Author: Jie Zhou, Jiajia Zhang, Wenbin Lu
Description: Generalized Odds Rate Mixture Cure (GORMC) model is a flexible model of fitting survival data with a cure fraction, including the Proportional Hazards Mixture Cure (PHMC) model and the Proportional Odds Mixture Cure Model as special cases. This package fit the GORMC model with interval censored data.

Title: Computation of functional similarities between GO terms and gene products
Author: Holger Froehlich <h.froehlich@dkfz.de> contributions by Tim Beissbarth <beissbarth@wehi.edu.au>
computing similarities between GO terms and gene products based on their GO annotation
Packaged: Mon Jun 18 10:57:58 2007; froehlih

Author: Holger Froehlich <h.froehlich@dkfz.de> contributions by Tim Beissbarth <t.beissbarth@dkfz.de>
Packaged: Tue Jul 10 09:51:54 2007; froehlih

Suggests: GOstats (>= 2.2.6), cluster (>= 1.11.7), mclust (>= 3.1), annotate
Packaged: Thu Oct 11 17:13:23 2007; froehlih

Packaged: Mon Dec 11 06:31:31 2006; froehlih

Title: Computation of functional similarities between GO terms and gene products; GO enrichement analysis
Suggests: GOstats, cluster (>= 1.11.7), mclust (>= 3.1), annotate, topGO
Packaged: Fri Dec  7 09:54:58 2007; froehlih

Packaged: Mon Dec 10 17:17:28 2007; froehlih

Depends: R (>= 2.6.0), GO (>= 2.0), annotate, topGO, cluster (>= 1.11.7), mclust (>= 3.1), RBGL, graph
Packaged: Wed Mar 26 09:01:27 2008; hornik

Packaged: Tue May 27 15:04:19 2008; froehlih

Depends: R (>= 2.6.0), GO.db (>= 2.2.0), AnnotationDbi, annotate, org.Dm.eg.db, org.Hs.eg.db, org.Mm.eg.db, org.Pf.plasmo.db, org.Rn.eg.db, org.Sc.sgd.db, topGO, cluster (>= 1.11.7), mclust (>= 3.1), RBGL, graph
computing similarities between GO terms and gene products based on their GO annotation. Moreover it allows for computing a GO enrichment analysis
Packaged: Mon Jun 30 14:15:59 2008; froehlih