Title: Interactive Analysis of UCSC Xena Data
Description: Provides functions and a Shiny application for downloading,
analyzing and visualizing datasets from UCSC Xena
(<http://xena.ucsc.edu/>), which is a collection of UCSC-hosted public
databases such as TCGA, ICGC, TARGET, GTEx, CCLE, and others.
Imports: dplyr (>= 0.8.3), ezcox, forcats, ggplot2 (>= 3.2.0), ggpubr
(>= 0.2), magrittr (>= 1.5), ppcor, psych, purrr, shiny (>=
1.3.2), stats, stringr, tibble (>= 2.1.3), tidyr,
Suggests: covr (>= 3.2.1), cowplot, DT (>= 0.5), furrr, future,
ggrepel, ggstatsplot, knitr, pacman, plotly, plyr, RColorBrewer
(>= 1.1.2), rmarkdown, scales, survival, survminer, testthat

Packaged: 2021-07-16 11:04:19 UTC; Administrator

Packaged: 2022-04-13 07:22:30 UTC; Administrator

Title: Download and Explore Datasets from UCSC Xena Data Hubs
Authors@R: c(person("Shixiang", "Wang", email = "w_shixiang@163.com", role = c("aut", "cre")),
Description: Download and explore datasets from UCSC Xena data hubs, which are
a collection of UCSC-hosted public databases such as TCGA, ICGC, TARGET, GTEx, CCLE, and others.
Databases are normalized so they can be combined, linked, filtered, explored and downloaded.
This package is based on 'XenaR' package.

Imports: httr, readr, methods, utils, dplyr, shinydashboard, shiny, DT

Authors@R: c(person("Shixiang", "Wang", email = "w_shixiang@163.com", role = c("aut", "cre"),

Imports: httr, readr, methods, utils, dplyr, shinydashboard, shiny, DT,
Suggests: knitr, rmarkdown, prettydoc, testthat, covr

Imports: httr, readr, methods, utils, dplyr, magrittr, jsonlite,

person("Christine", "Stawitz", role="rev", comment = "Christine reviewed the package for ropensci, see <https://github.com/ropensci/software-review/issues/315>"),
person("Carl", "Ganz", role="rev", comment = "Carl reviewed the package for ropensci, see <https://github.com/ropensci/software-review/issues/315>"))
Imports: httr, readr, methods, utils, dplyr, magrittr, jsonlite, rlang
Suggests: DT, knitr, rmarkdown, prettydoc, shiny, shinydashboard,
Christine Stawitz [rev] (Christine reviewed the package for ropensci,
Carl Ganz [rev] (Carl reviewed the package for ropensci, see