Description: Posterior inference under the convex mixture regression (CoMiRe) models introduced by Canale, Durante, and Dunson (2018) <doi.org/10.1111/biom.12917>.

Title: Correlation Guided Network Integration (CoNI)
Authors@R: c(person(given = "José Manuel",
Description: Integrates two numerical omics data sets from the same samples using partial correlations. The output can be represented as a network, bipartite graph or a hypergraph structure. The method used in the package refers to Klaus et al (2021) <doi:10.1016/j.molmet.2021.101295>.
Suggests: kableExtra (>= 1.3.2), knitr (>= 1.31), rmarkdown (>= 2.6)
Packaged: 2021-09-29 16:18:07 UTC; manuel.kuhn
Author: José Manuel Monroy Kuhn [aut, cre],
Maintainer: José Manuel Monroy Kuhn <nolozz@gmail.com>

person("Andreas", "Rieckmann", role = c("aut","cre"), email = "aric@sund.ku.dk"),
person("Piotr", "Dworzynski", role = "aut", email = "piotr@sund.ku.dk"),
person("Leila", "Arras", role = "ctb", email = "leila.arras@hhi.fraunhofer.de"),
person(c("Claus","Thorn"), "Ekstrom", role = "aut", email = "ekstrom@sund.ku.dk"))
Description: Implementing the computational phase of the Causes of Outcome Learning approach as described in Rieckmann, Dworzynski, Arras, Lapuschkin, Samek, Arah, Rod, Ekstrom. Causes of outcome learning: A causal inference-inspired machine learning approach to disentangling common combinations of potential causes of a health outcome. medRxiv (2020) <doi:10.1101/2020.12.10.20225243>. The optional 'ggtree' package can be obtained through Bioconductor.
Imports: Rcpp, data.table, pROC, graphics, mltools, stats, plyr,

Description: Implementing the computational phase of the Causes of Outcome Learning approach as described in Rieckmann, Dworzynski, Arras, Lapuschkin, Samek, Arah, Rod, Ekstrom. 2022. Causes of outcome learning: A causal inference-inspired machine learning approach to disentangling common combinations of potential causes of a health outcome. International Journal of Epidemiology <doi:10.1093/ije/dyac078>. The optional 'ggtree' package can be obtained through Bioconductor.