Packaged: Mon May 15 16:37:20 2006; strimmer

Packaged: Mon Jun  5 18:24:14 2006; strimmer

Description: With the present version, GeneTS has become a meta-package that
exists mainly for reasons of backward compatibility. Its only purpose
is to load the GeneCycle and GeneNet packages.You may load
Packaged: Thu Aug 10 12:59:08 2006; strimmer

Suggests: graph (>= 1.4.22), Rgraphviz (>= 1.4.23)
For plotting the inferred gene association networks GeneTS requires the
Packaged: Mon Sep 20 20:44:04 2004; strimmer

Suggests: MASS, graph (>= 1.4.0), Rgraphviz (>= 1.4.0)
Packaged: Tue Sep 28 18:18:16 2004; strimmer

Packaged: Wed Feb 23 20:11:57 2005; strimmer

Description: GeneTS provides methods for analyzing gene expression
(time series) data. Examples are the analysis of cell cycle data
and methods for inferring large sparse graphical Gaussian models
to identify gene association networks. GeneTS offers data structures
and functions for longitudinal data with multiple variables,
repeated measurements. The multiple time series data may also be
irregularily spaced. Other functions in GeneTS include fast svd,
density estimation, large-scale covariance resp. correlation
estimation etc.  For plotting the gene networks the
optional "graph" and "Rgraphviz" packages are required (available
Packaged: Wed May 11 19:13:45 2005; strimmer

to identify gene association networks. In addition, GeneTS offers
data structures and functions for longitudinal data with multiple
variables, repeated measurements, and irregularly spaced time points.
Other functions in GeneTS include fast SVD, density estimation
via poisson regression, large-scale covariance resp. correlation
matrix estimation via shrinkage etc.   For plotting the gene networks
Packaged: Fri Jun 10 10:19:43 2005; strimmer

In addition, GeneTS offers general data structures and functions for
longitudinal data with multiple variables, repeated measurements,
and irregularly spaced time points. For plotting the gene networks
Packaged: Sun Aug 21 18:42:03 2005; strimmer

Packaged: Wed Oct 12 20:35:59 2005; biocbuild