Suggests: CoxBoost, locfit, survival, penalized
Packaged: Tue Jul 15 21:24:12 2008; hornik

Suggests: CoxBoost, locfit, penalized, codetools

Description: Package peperr is designed for prediction error estimation
through resampling techniques, possibly accelerated by parallel
execution on a compute cluster. Newly developed model fitting

Suggests: CoxBoost, locfit, penalized, codetools, randomSurvivalForest

Description: Designed for prediction error estimation

routines can be easily incorporated. Methods used in the package are detailed in
Porzelius Ch., Binder H. and Schumacher M. (2009) <doi:10.1093/bioinformatics/btp062>

Depends: R (>= 2.2.0), methods, utils, graphics, stats
Description: This package provides a variety of methods for dealing
with analysis of peptide library data, including clustering,

Title: Piecewise Exponential Distribution with Random Time Grids
Description: Fits the Piecewise Exponential distribution with random time grids using the clustering structure of the Product Partition Models. Details of the implemented model can be found in Demarqui et al. (2008) <doi:10.1007/s10985-008-9086-0>.
Packaged: 2020-06-24 22:16:27 UTC; fndemarqui

Title: Reading Portable Encapsulated Projects
Authors@R: c(person("Nathan", "Sheffield", email = "nathan@code.databio.org",
Description: A PEP, or Portable Encapsulated Project, is a dataset that
subscribes to the PEP structure for organizing metadata. It is written using
a simple YAML + CSV format, it is your one-stop solution to metadata
management across data analysis environments. This package reads this
standardized project configuration structure into R.
Imports: yaml, stringr, pryr, data.table, methods
Packaged: 2020-06-03 17:03:47 UTC; mstolarczyk

Packaged: 2020-10-16 00:02:10 UTC; mstolarczyk

Title: Evaluation of diversity in nucleotide libraries
Author: Heike Hofmann, Eric Hare, ggobi Foundation
Description: Functions for evaluating diversity in peptide libraries, including
NNN, NNB, NNK/S, and NNN schemes.  This includes expected coverage, relative
efficiency, and functional diversity of the library.