tidyr, rlang, graphics, RColorBrewer, grid, qtl2, ggrepel
Packaged: 2021-09-07 17:25:50 UTC; brianyandell

Packaged: 2022-01-24 19:25:10 UTC; brianyandell

Title: Pattern Support for 'qtl2' Package
Description: Routines in 'qtl2' to study allele patterns in quantitative trait loci (QTL)
Useful in crosses with more than two alleles to identify how sets of alleles,
genetically different strands at the same locus, have different response levels.
Imports: dplyr, tidyr, purrr, stringr, ggplot2, assertthat,
RColorBrewer, qtl2, qtl2fst, fst, rlang, stats, graphics
Packaged: 2021-09-21 18:54:32 UTC; brianyandell

Packaged: 2022-01-24 17:41:43 UTC; brianyandell

Title: Testing Pleiotropy in Multiparental Populations
Maintainer: Frederick J Boehm <frederick.boehm@gmail.com>
adaptation of Jiang & Zeng's (1995) <https://www.genetics.org/content/140/3/1111> likelihood ratio test for testing
the null hypothesis of pleiotropy against the alternative hypothesis,
two separate quantitative trait loci. The test differs from that in Jiang & Zeng (1995) <https://www.genetics.org/content/140/3/1111>
and that in Tian et al. (2016) <doi:10.1534/genetics.115.183624> in
that our test accommodates multiparental populations.
Imports: dplyr, gemma2, ggplot2, magrittr, MASS, Rcpp, rlang, stringr,
Suggests: covr, mvtnorm, knitr, rmarkdown, testthat, broman, devtools,
Author: Frederick J Boehm [aut, cre] (<https://orcid.org/0000-0002-1644-5931>)

Imports: dplyr, gemma2, ggplot2, magrittr, MASS, Rcpp, rlang, tibble,
Suggests: covr, future, mvtnorm, knitr, rmarkdown, testthat, broman,

Author: Saunak Sen, Jaya Satagopan, and Gary Churchill
Description: Tools for the design of QTL experiments
License: GPL version 2 or newer (http://www.gnu.org/copyleft/gpl.html)

Author: Saunak Sen, Jaya Satagopan, Karl Broman, and Gary Churchill

Author: Saunak Sen, Jaya Satagopan, Karl Broman, Brian Yandell and Gary Churchill

Package: qtlbim
Version: 1.05-3
Date: 9/7/2006
Author: Brian S. Yandell <yandell@stat.wisc.edu> and Nengjun Yi
<nyi@ms.soph.uab.edu>, with contributions from Tapan Mehta, Samprit
Banerjee, and Daniel Shriner (uab), Whipple Neely (UW-Madison) and Randy
von Smith (Jackson Labs)
Title: QTL Bayesian Interval Mapping
Description: Functions for model selection for genetic architecture.
Maintainer: Brian S. Yandell <yandell@stat.wisc.edu>
Depends: stats, qtl (>= 1.0.3), lattice, coda, tools, MASS
License: GPL version 2 or newer
URL: http://www.soph.uab.edu/qtlbim
Packaged: Thu Sep  7 19:28:46 2006; hornik