Depends: R (>= 2.6.0), kernlab (>= 0.9), KEGG.db (>= 2.2.0), biomaRt (>= 1.12.1), KEGGSOAP (>= 1.12.0), RBGL, AnnotationDbi
Packaged: Wed Jul  9 11:54:44 2008; froehlih

Packaged: 2009-04-21 10:53:45 UTC; biocbuild

Packaged: 2009-11-12 10:24:12 UTC; biocbuild

Packaged: 2010-04-23 00:11:03 UTC; biocbuild

(>= 1.12.0), RBGL, AnnotationDbi,org.Dm.eg.db, keggorthology

Packaged: 2010-10-27 09:29:26 UTC; biocbuild

Title: Simulate, model, and display data from a time-course microarray
experiment with periodic gene expression
Author: Timothy McMurry <tmcmurry@depaul.edu>, Arthur Berg
Description: Fit models for periodic gene expression to time-course
microarray data in a normal mixture model framework with mean
approximated by a truncated Fourier series and covariance
structure modeled by an ARMA(p,q) process.  Estimation is

Title: Retrieves Gene Expression Dataset from GEO Code and Platform ID
Authors@R: person("Davide", "Chicco", email = "davidechicco@davidechicco.it",
Description: A function that reads in the GEO code and the platform ID of a gene expression dataset, retrieves its data from GEO, (optional) retrieves the gene symbols of the dataset, and returns a simple dataframe table containing all the data. Platforms available: GPL11532, GPL23126, GPL6244, GPL80, GPL8300, GPL80, GPL96, GPL570, GPL571, GPL20115, GPL1293,  GPL6102, GPL6104, GPL6883, GPL6884, GPL13497, GPL14550, GPL17077, GPL6480. GEO: Gene Expression Omnibus. ID: identifier code. The GEO datasets are downloaded from the URL <https://ftp.ncbi.nlm.nih.gov/geo/series/>.
Packaged: 2020-11-10 20:31:47 UTC; davidechicco

Title: Retrieves Gene Expression Dataset and Gene Symbols from GEO Code
Description: A function that reads in the GEO code of a gene expression dataset, retrieves its data from GEO, (optional) retrieves the gene symbols of the dataset, and returns a simple dataframe table containing all the data. Platforms available: GPL11532, GPL23126, GPL6244, GPL80, GPL8300, GPL80, GPL96, GPL570, GPL571, GPL20115, GPL1293,  GPL6102, GPL6104, GPL6883, GPL6884, GPL13497, GPL14550, GPL17077, GPL6480. GEO: Gene Expression Omnibus. ID: identifier code. The GEO datasets are downloaded from the URL <https://ftp.ncbi.nlm.nih.gov/geo/series/>.
Packaged: 2020-11-16 19:07:27 UTC; davidechicco