Packaged: 2011-01-21 16:41:41 UTC; peterjlipman

and the primary outcome with population-based data.

Title: Clonal Heterogeneity Analysis Tool
Description: CHAT is a collection of tools developed for tumor subclonality analysis using high density DNA SNP array data and sequencing data. The pipeline consists of four major compartments: 1) tumor aneuploid genome proportion (AGP) calculation and ploidy estimation. 2) segment-specific AGP calculation and absolute copy number estimation for somatic CNAs. 3) cancer cell fraction correction for somatic SNVs in clonal or subclonal sCNA regions. 4) number of subclones estimation using Dirichlet process prior followed by MCMC approach.
Depends: R (>= 2.10), parallel, DNAcopy, DPpackage

Title: Canadian Historical Climate Network
Description: A compilation of historical through contemporary climate
measurements scraped from the Environment Canada Website
Including tools for scraping data, creating metadata and

Depends: R (>= 2.11.0),methods,bitops, RCurl

Title: Closest History Flow Field Forecasting for Bivariate Time Series
Maintainer: Kyle A. Caudle <kyle.caudle@sdsmt.edu>
Description: The software matches the current history to the closest history in a time series to build a forecast.

person("Xiaoqiang", "Wang", email = "xiaoqiang.wang@sdu.edu.cn", role = "aut"),
person("Julie", "Aubert", email = "julie.aubert@agroparistech.fr", role = c("aut","cre"))
Description: An exact and a variational inference for
coupled Hidden Markov Models applied to the joint detection of copy number variations.

Description: Compute Chinese capital stocks in provinces level, based on Zhang (2008) <DOI:10.1080/14765280802028302>.

Package: CHNOSZ
Title: Chemical Thermodynamics and Activity Diagrams
Version: 0.8
Date: 2009-04-22
Author: Jeffrey M. Dick <jmdick@asu.edu>
Maintainer: Jeffrey M. Dick <jmdick@asu.edu>
Depends: utils
Description: Calculation of the standard molal thermodynamic properties
and chemical affinities of reactions between and among
minerals, inorganic, organic, and/or biomolecular aqueous and
crystalline species. Incorporation of an extensive database of
thermodynamic properties of species and algorithms for
computing the standard thermodynamic properties of neutral and
ionized proteins from amino acid group contributions.
Generation of chemical speciation and predominance diagrams for
stable and metastable equilibrium in open systems as a function
of temperature, pressure, and chemical activities or fugacities
of basis species.
License: GPL-2
ZipData: no
Packaged: 2009-04-23 02:51:33 UTC; jedick
Repository: CRAN
Date/Publication: 2009-04-23 07:11:01