Author: Dabao Zhang, Zhongli Jiang, Zeyu Zhang, Yu-ting Chen
Packaged: 2022-03-16 17:48:42 UTC; admin-zhangdb

Title: Probability of Detection for Qualitative PCR Methods
Author: Markus Boenn (State Office for Consumer Protection Saxony-Anhalt, Germany)
Description: This tool computes the probability of detection (POD) curve and the limit of detection (LOD), i.e. the number of copies of the target DNA sequence required to ensure a 95 % probability of detection (LOD95). Other quantiles of the LOD can be specified.
This is a reimplementation of the mathematical-statistical modelling of the validation of qualitative polymerase chain reaction (PCR) methods within a single laboratory as provided by the commercial tool 'PROLab' <http://quodata.de/>. The modelling itself has been described by Uhlig et al. (2015) <doi:10.1007/s00769-015-1112-9>.

Title: Principal Orthogonal ComplEment Thresholding (POET) method
Author: Jianqing Fan, Yuan Liao, Martina Mincheva
Description: Estimate large covariance matrices in approximate factor
models by thresholding principal orthogonal complements.

Title: Principal Orthogonal ComplEment Thresholding (POET) Method

Title: Downloading, Reading and Analysing POF Microdata
Description: Provides tools for downloading, reading, and analysing the POF
Packaged: 2020-12-11 17:12:18 UTC; gabriel.assuncao

Description: Provides tools for downloading, reading and analysing the POF,
Packaged: 2021-04-21 16:08:18 UTC; gabriel.assuncao

Packaged: 2021-05-01 01:29:19 UTC; gabriel.assuncao

Packaged: 2021-06-23 21:05:31 UTC; gabriel.assuncao

Packaged: 2021-10-15 19:08:11 UTC; gabriel.assuncao

Title: Downloading, Reading and Analyzing POF Microdata
Description: Provides tools for downloading, reading and analyzing the POF,
Packaged: 2021-11-29 15:12:14 UTC; gabriel.assuncao

Title: Downloading, Reading and Analyzing POF Microdata - Package in
Packaged: 2022-03-24 18:04:01 UTC; gabriel.assuncao

Title: Protein Structure Guided Local Test
Author: Rachel Marceau West, Shannon T. Holloway
Description: Provides an implementation of a rare variant association test that utilizes protein tertiary structure to increase signal and to identify likely causal variants. Performs structure-guided collapsing, which leads to local tests that borrow information from neighboring variants on a protein and that provide association information on a variant-specific level. For details of the implemented method see West, R. M.,  Lu, W., Rotroff, D. M., Kuenemann, M., Chang, S-M., Wagner M. J., Buse, J. B., Motsinger-Reif, A., Fourches, D., and Tzeng, J-Y. (2019) <doi:10.1371/journal.pcbi.1006722>.
Depends: methods, stats, rARPACK, Matrix, CompQuadForm