Title: Detection of Structural Changes in Climate and Environment Time
person("Claudie", "Beaulieu", role="aut"), person("Simon", "Taylor", role="aut"))
Description: Tools for automatic model selection and diagnostics for Climate and Environmental data.  In particular the envcpt() function does automatic model selection between a variety of trend, changepoint and autocorrelation models.  The envcpt() function should be your first port of call.
Depends: R(>= 3.3), changepoint(>= 2.2.2), forecast, grDevices, MASS,

person("Claudie", "Beaulieu", role="aut"), person("Simon", "Taylor", role="aut"),person("Harjit","Hullait",role="aut"))

Depends: R(>= 3.3), changepoint(>= 2.2.2), grDevices, MASS, methods,

Title: Environmental Exposure on the Individual Level
Authors@R: person("Bing","Zhang", role = c("aut", "cre"), email = "zhangb269@mail2.sysu.edu.cn")
Description: Tools for the assessment of the environmental exposure. The package provides three methods (nearest monitoring site, inverse distance weighted as described in Li Wu (2017) <doi:10.1016/j.envint.2016.11.013>,and ordinary kriging) to calculate the environmental exposure (e.g. air pollution) on the individual level.

Title: Whole Genome Phylogenies Using Sequence Environments
Description: Contains utilities for the analysis of protein sequences in a phylogenetic context.
Allows   the generation of phylogenetic trees base on protein sequences in an alignment-independent way.
Two different methods have been implemented. One approach is based on the frequency analysis of n-grams,
previously described in Stuart et al. (2002) <doi:10.1093/bioinformatics/18.1.100>. The other approach is based on the species-specific neighborhood preference around amino acids. Features include the conversion of a protein set into a vector
reflecting these neighborhood preferences, pairwise distances (dissimilarity) between these vectors,
and the generation of trees based on these distance matrices.
Packaged: 2021-05-25 17:45:17 UTC; juancarlosaledo
Author: Juan Carlos Aledo [aut, cre] (<https://orcid.org/0000-0002-3497-9945>)
Maintainer: Juan Carlos Aledo <caledo@uma.es>