Description: Provides access to phyloinformatic data in NeXML format.  The
package should add new functionality to R such as the possibility to
manipulate NeXML objects in more various and refined way and compatibility
with 'ape' objects. Note that for the suggested packages, Sxslt is
available through Omegahat.org and rrdf from carlboettiger.info using the
additional repository URLs given below. Alternatively these can be
installed from Github, https://github.com/cboettig/Sxslt and

Title: Semantically Rich I/O for the 'NeXML' Format

testthat (>= 0.10.0), phylobase (>= 0.6.8), rmarkdown (>=

Description: Provides access to phyloinformatic data in 'NeXML' format.  The
manipulate 'NeXML' objects in more various and refined way and compatibility

person("Scott", "Chamberlain", role ="aut", comment = c(ORCID="0000-0003-1444-9135")),
X-schema.org-keywords: metadata, nexml, phylogenetics, linked-data
Author: Carl Boettiger [cre, aut] (0000-0002-1642-628X),

Suggests: rdflib, geiger (>= 2.0), phytools (>= 0.3.93), knitr (>=
1.5), rfigshare (>= 0.3.0), knitcitations (>= 1.0.1), testthat
Author: Carl Boettiger [cre, aut] (<https://orcid.org/0000-0002-1642-628X>),

Suggests: spelling, rdflib, geiger (>= 2.0), phytools (>= 0.3.93),

testthat (>= 0.10.0), rmarkdown (>= 0.3.3), xslt, taxize (>=

testthat (>= 0.10.0), rmarkdown (>= 0.3.3), rlang, xslt, covr,
tidyr (>= 0.3.1), stringr (>= 1.0), stringi, xml2
Collate: 'S4-utils.R' 'classes.R' 'add_basic_meta.R' 'add_characters.R'

testthat (>= 0.10.0), rmarkdown (>= 0.3.3), xslt, covr,
tidyr (>= 0.3.1), stringr (>= 1.0), stringi, xml2, rlang

Title: Entropy Based Method for the Detection of Significant Variation
person("Federico", "Zambelli", email = "federico.zambelli@unimi.it", role = "cre",
person("Giulio", "Pavesi", email = "giulio.pavesi@unimi.it", role = "aut",
Description: An implementation of a method based on information theory devised
for the identification of genes showing a significant variation of expression
across multiple conditions. Given expression estimates from any number of
RNA-Seq samples and conditions it identifies genes or transcripts with a
significant variation of expression across all the conditions studied,
together with the samples in which they are over- or under-expressed.
Packaged: 2018-02-09 18:44:51 UTC; federicozambelli
Author: Federico Zambelli [cre] (<https://orcid.org/0000-0003-3487-4331>),