A3: Accurate, Adaptable, and Accessible Error Metrics for
Predictive Models
Accurate, Adaptable, and Accessible Error Metrics for Predictive
Models
Reliability and Scoring Routines for the Approach-Avoidance Task
Apps Based Activities for Communicating and Understanding
Statistics
Array Based CpG Region Analysis Pipeline
Implementation of Artificial Bee Colony (ABC) Optimization
Approximate Bayesian Computational model for estimating P2
Approximate Bayesian Computational Model for Estimating P2
The Abnormal Blood Profile Score to Detect Blood Doping
Abrupt Change-Point or Aberration Detection in Point Series
Categorical data analisys with complete or missing responses
Categorical data analysis with complete or missing responses
Analysis of Congruent Diversification Classes
Tools for Autoregressive Conditional Duration Models
Análisis Computacional de Eventos de Protesta
Analisis Computacional de Eventos de Protesta
ACE Kin Pair Data Simulations and Model Fitting
Estimating Age Modification Effect on Genetic and Environmental
Variance Components in Twin Models
Estimating Dynamic Heritability and Twin Model Comparison
Estimation of Dynamic Heritability and Comparison of Twin Models
Estimation of Interpretable eQTL Effect Sizes Using a Log of
Linear Model
Affymetrix SNP probe-summarization using non-negative matrix
factorization
Affymetrix SNP Probe-Summarization using Non-Negative Matrix
Factorization
Gene Enrichment Analysis from ACSN Maps or Gmt Files
Gene Enrichment Analysis from ACSN Maps or GMT Files
A Companion Package for the Book "A Course in Statistics with R"
Asymptotic Classification Theory for Cognitive Diagnosis
Optimal Out-of-Sample Forecast Evaluation and Testing under
Stationarity
Acute Chronic Workload Ratio Calculation
Automated Deconvolution Augmentation of Profiles for Tissue
Specific Cells
A Package for Analysis of Accelerated Destructive Degradation
Test Data
Analysis of Accelerated Destructive Degradation Test Data
An Interpretation of the ADM method - automated detection
algorithm.
Algorithms using Alternating Direction Method of Multipliers
Regularized Model with Selecting the Number of Non-Zeros
Penalized Precision Matrix Estimation via ADMM
Ancient Demographic Modelling Using Radiocarbon
Adoption Probability, Triers and Users Rate of a New Product
Use Least Squares Polynomial Regression and Statistical Testing
to Improve Savitzky-Golay
Fast Clustering Using Adaptive Density Peak Detection
Automatic Direct Variable Selection via Interrupted Coefficient
Estimation
Change Point Analysis in ARIMA Forecasting
Statistical Modelling for Asymmetric Exponential Power
Distribution
Model-Based Estimation of Confounder-Adjusted Attributable
Fractions
Hybrid simulation and genome scan for dominant markers
Hybrid Simulation and Genome Scan for Dominant Markers
Toolkit for Regression Analysis of Kazakhstan Banking Sector
Data
The Attributable Fraction (AF) Described as a Function of
Disease Heritability, Prevalence and Intervention Specific
Factors
Relationship Matrices for Diploid and Autopolyploid Species
Estimation in adaptive group sequential trials
Estimation in Adaptive Group Sequential Trials
Additive Heredity Model: Method for the Mixture-of-Mixtures
Experiments
Functions and Data for the Book 'Applied Hierarchical Modeling
in Ecology'
Functions and Data for the Book "Applied Hierarchical Modeling
in Ecology" Vols 1 and 2
Functions and Data for the Book 'Applied Hierarchical Modeling
in Ecology' Vols 1 and 2
Estimation and Testing of Average Hazard Ratios
Flexible Parametric Accelerated Hazards Models
Model selection and multimodel inference based on (Q)AIC(c)
Model Selection and Multimodel Inference Based on (Q)AIC(c)
An R Package to Estimate Box-Cox Power Transformation Parameter
Estimation of Box-Cox Power Transformation Parameter
Tools to look at the data ("Ad Inidicia Spectata")
Atlas of Living Australia (ALA) Data and Resources in R
Algorithm Laplace density quantile regression
Quantile Regression Using Asymmetric Laplace Distribution
Accumulated Local Effects (ALE) Plots and Partial Dependence
(PD) Plots
Generate Age-Length Keys for fish populations
multivariate curve resolution alternating least squares (MCR-ALS)
multivariate curve resolution alternating least squares
(MCR-ALS)
Multivariate Curve Resolution Alternating Least Squares
(MCR-ALS)
Accelerated line search algorithm for simultaneous orthogonal
transformation of several positive definite symmetric matrices
to nearly diagonal form.
Companion to Applied Linear Statistical Models
Optimal Experimental Designs for Accelerated Life Testing
Adaptive Lasso for the Cox Regression with Interval Censored and
Possibly Left Truncated Data
Compare Gene Expressions from 2-Treatment RNA-Seq Experiments
Generate LaTeX Code for Auto-Multiple-Choice (AMC)
Alternating Minimization Induced Active Set Algorithms
A Multidirectional Optimum Ecotope-Based Algorithm
Artificial Neural Network Training and Simulating
Common Code for the 'AMPED' and 'PIMPLE' 'shiny' Apps for
Stakeholder Engagement and Harvest Strategies
Shiny Apps to Support Capacity Building on Harvest Control Rules
Feedforward Artificial Neural Network optimized by Genetic
Algorithm
Artificial Neural Networks for Anomaly Detection
One-Way Analysis of Variance Based on Triangular Fuzzy Numbers
Interactive Document for Working with Analysis of Variance
Test ANOVA Replications by Means of the Prior Predictive p-Value
Inference in the Balanced One-Way ANOVA Model with Random Factor
Computation of the 'Area Potentially Available' (APA) to Trees
A New Age-Period-Cohort Model for Describing and Investigating
Inter-Cohort Differences and Life Course Dynamics
Analysis of Unreplicated Orthogonal Experiments using All
Possible Comparisons
Routines for Descriptive and Model-Based APC Analysis
Multiple Testing Approach using Average Power Function (APF) and
Bayes FDR Robust Estimation
Auto-Adaptive Parentage Inference Software Tolerant to Missing
Parents
An Approach for Machine-Learning Modelling
Augmented and Penalized Minimization Method L0
Adjusted Prediction Model Performance Estimation
General Utility Functions for the 'Agricultural Production
Systems Simulator'
Average Positive Predictive Values (AP) for Binary Outcomes and
Censored Event Times
Another Look at the Acceptance-Rejection Method
Segmentation of an autoregressive Gaussian process of order 1
A R Adaptive Multiple Importance Sampling
Fitting Univariate Censored Linear Regression Model with
Autoregressive Errors
Autoregressive Cokriging Models for Multifidelity Codes
ARDL, ECM and Bounds-Test for Cointegration
Allelic richness estimation, with extrapolation beyond the sample size
Environment air pollution epidemiology: a library for time
series analysis
Adaptable Regularized Hotelling's T^2 Test for High-Dimensional
Data
Time Series Forecasting using ARIMA-ANN Hybrid Model
Covariate-Adjusted Receiver Operating Characteristic Curve
Inference
Retrieving, Managing and Analysing Air Quality and Weather Data
for Lombardy (Italy) using ARPA Lombardia Open Database
Tools for simulating different methods of observing behavior
based on alternating renewal processes
Tools for Simulating Direct Behavioral Observation Recording
Procedures Based on Alternating Renewal Processes
Aligned Rank Transform for Nonparametric Factorial Analysis
Infer a time-varying DBN network from time series data.
Time-Varying DBN Inference with the ARTIVA (Auto Regressive TIme
VArying) Model
Gene and Pathway p-values computed using the Adaptive Rank
Truncated Product
Gene and Pathway p-Values Computed using the Adaptive Rank
Truncated Product
Who Ever Care About the [Art of R] Scripts?
To Insert Title, Divider, and Block of Comments
Fitting Autoregressive Censored Linear Mixed-Effects Models
Fitting Autoregressive Censored Mixed-Effects Models
Censored Mixed-Effects Models with Different Correlation
Structures
Interface to the Australian Statistical Geography Standard
Automatic Statistical Identification in Complex Spectra
Linkage map construction using the MSTmap algorithm
Linkage Map Construction using the MSTmap Algorithm
Bayesian Inference on Causal Genetic Variants using Affected
Sib-Pairs Data
Applied Singular Spectrum Analysis (ASSA)
Adaptive Subgroup Selection in Group Sequential Trials
Interactive Document for Working with Association Rule Mining
Analysis
Stochastic Volatility Models with or without Leverage
Automatic Time Series Analysis and Forecasting Using the Ata
Method
Automatic Time Series Analysis and Forecasting using the Ata
Method
Inference for Average Treatment Effects using Covariate
Balancing
Bounding Treatment Effects by Limited Information Pooling
Threshold independent performance measures for probabilistic
classifiers.
Threshold Independent Performance Measures for Probabilistic
Classifiers
Variable Selection with Random Forest and the Area Under the
Curve
Approximate Unconditional and Permutation Tests
Catchment Area Weighted Daily Climate Data Anywhere in Australia
Catchment Area Weighted Climate Data Anywhere in Australia
A Simple Client to the 'AWS' Key Management Service
Amazon 'Kinesis' Consumer Application for Stream Processing
Analyzing Zero-Inflated and Zero-Altered Data
Time Resolved Simulations of Antibody Repertoires
Improved False Positive Control of Gene-Permuting GSEA with
Absolute Filtering
Inferring Directional Conservative Causal Core Gene Networks
Creation and evaluation of Acceptance Sampling Plans
Creation and Evaluation of Acceptance Sampling Plans
Assay-based Cross-sectional Estimation of incidence rates
A Cost-Minimal Regular Spanning Subgraph with TreeClust
Extract Circadian Rhythms Metrics from Actigraphy Data
Activity Fragmentation Metrics Extracted from Minute Level
Activity Data
A Toolbox for Parsing Scored Actigraphy Data
Finding Cancer Driver Proteins with Enriched Mutations in
Post-Translational Modification Sites
A Driver Discovery Tool for Cancer Whole Genomes
Integrative Pathway Enrichment Analysis of Multivariate Omics
Data
Activity Index Calculation using Raw Accelerometry Data
Activity Index Calculation using Raw 'Accelerometry' Data
A Package for Displaying Visual Scenes as They May Appear to an
Animal with Lower Acuity
Adaptive Mixture of Student-t distributions
Adaptive Mixture of Student-t Distributions
Adaptive Sampling for Positive Unlabeled and Label Noise
Learning
A class of adaptive elastic net methods for censored data
A Class of Adaptive Elastic-net Methods for Censored Data
A Class of Adaptive Elastic Net Methods for Censored Data
Adaptive Semiparametric Regression with Simultaneous Confidence
Bands
Adaptive Semiparametric Additive Regression with Simultaneous
Confidence Bands and Specification Tests
Adequacy of probabilistic models and generation of pseudo-random
numbers.
Adequacy of Probabilistic Models and General Purpose
Optimization
Interactive Visualisation of Medication Adherence Patterns
Adjusted Bayesian Quantile Regression Inference
Upper Clopper-Pearson Confidence Limits for Burn-in Studies
under Additional Available Information
Solving 1D Advection Bi-Flux Diffusion Equation
A Computational Tool for Aerobiological Data
Bayesian Adaptive Elastic-Net for high dimensional sparse
quantile regression models
Estimate Aerosol Particle Collection Through Sample Lines
Aggregate Numeric and Categorical Variables by an ID
Aggregate Numeric, Date and Categorical Variables by an ID
Aggregate Numeric, Date and Categorical Variables
Statistical Tools for Measuring Agreement
agreement: Analyse the agreement between two measurement methods
Agreement Interval of Two Measurement Methods
Experimental Statistics and Graphics for Agricultural Sciences
Regression Analysis Linear and Nonlinear for Agriculture
Data Analysis of Pesticide Application Technology
Fast Searching for Multiple Keywords in Multiple Texts
Process and Display Data from Air Quality Sensors
Haplotype Two Snips Out of a Paired Group of Patients
Comparison of Alternative Multiple Sequence Alignments
Comparison of Alternative Multiple Aequence Alignments
Computes all of a word's possible spellings.
Allele Retention, Inbreeding, and Demography
Predict and Visualize Population-Level Changes in Allele
Frequencies in Response to Climate Change
Partition/Decomposition of Additive Genetic Values by Paths of
Information
Partition/Decomposition of Breeding Values by Paths of
Information
This package includes pricing function for selected American
call options with underlying assets that generate payouts.
Generates Samples or Complete List of Brazilian IBGE (Instituto
Brasileiro De Geografia e Estatistica) Census Households,
Geocoding it by Google Maps
Tractable Parametric Odds-Based Regression Models
Statistical Analysis Of Amplicon Data Of The Same Sample To
Identify Artefacts
Statistical Analysis of Amplicon Data of the Same Sample to
Identify Artefacts
An extended Bayesian Learning Technique developed by Dr. Geoff
Webb
Analysis of Codon Data under Stationarity using a Bayesian
Framework
Targeted Differential and Global Enrichment Analysis of
Taxonomic Rank by Shared Asvs
Functions for analysis of fMRI datasets stored in the ANALYZE format.
Functions for analysis of fMRI datasets stored in the ANALYZE or NIFTI format.
Functions for analysis of fMRI datasets stored in the ANALYZE or
NIFTI format.
Functions for Analysis of fMRI Datasets Stored in the ANALYZE or
NIFTI Format
Functions for I/O of ANALYZE format .img and .hdr image files.
Assigning Ancestry Based on Population References
Asynchronous Disk-Based Representation of Massive Data
Simulate a Bus Route Creel Survey of Anglers
Compare Activity Patterns with Activity Probability Density
(APD)
Networks Characterising the Physical Configurations of Animal
Habitats
Annotate the Gene Symbols for Probes in Expression Array
Data extraction tool from annotations files.
AnnotLists: A tool to annotate multiple lists from a specific
annotation file.
Extract Subsequences from GenBank Annotations
A GUI for Smith's Mean Measure of Divergence
A Shiny GUI for Smith's Mean Measure of Divergence (MMD)
An R-Shiny Application for Smith's Mean Measure of Divergence
(MMD)
An R Package for Smith's Mean Measure of Divergence (MMD)
Statistical methods for anthropometric data oriented towards the
ergonomic design of products
Statistical Methods for Anthropometric Data
Antibody Titer Analysis of Vaccinated Patients
A-Optimal Block Designs for Comparing Test Treatments with
Controls
Classic, Nonparametric and Bayesian One-Way Analysis of Variance
Panel
Process the Apache Web Server Log Combined Files
Process the Apache Web Server Access Log Files
Functions and Data Sets for 'Applied Predictive Modeling'
AquaEnv - an integrated development toolbox for aquatic chemical
model generation
Integrated Development Toolbox for Aquatic Chemical Model
Generation
Rigorous Data Reduction and Error Propagation of '40Ar/39Ar'
Data
Rigorous Data Reduction and Error Propagation of Ar40 / Ar39
Data
Bayesian Modeling of Archaeological Chronologies
Post-Processing of the Markov Chain Simulated by 'ChronoModel'
or 'Oxcal'
Post-Processing of the Markov Chain Simulated by 'ChronoModel',
'Oxcal' or 'BCal'
Arfima-MLM Estimation For Repeated Cross-Sectional Data
Improved Communication to Users with Respect to Problems in
Function Arguments
Geometric Morphometrics Analysis and Virtual Anthropology
Geometric Morphometric Methods and Virtual Anthropology Tools
Detection and Correction of Spatial Bias in HTS Screens
Backtesting Simple Asset Allocation Strategies
Estimating Asset Correlations from Default Data
Optimal pricing of assets with fixed expiry date.
Optimal Pricing of Assets with Fixed Expiry Date
Statistical Tests for Genetic Association Studies
Density Estimation by Using Asymmetrical Kernels
Kernel Density Estimation and Selection of Optimum Bandwidth
Asymmetric Second Order Rotatable Designs (AsymmetricSORDs)
Regression Analysis of Sparse Asynchronous Longitudinal Data
A GTK GUI for teaching basic concepts in statistical inference,
and doing elementary bayesian tests.
Download Air Quality and Meteorological Information of Chile
Acoustic Traveltime Calculations for 1-D Atmospheric Models
Data Augmentation for Machine Learning on Tabular Data
Creates a Neighbourhood Using Locality Sensitive Hashing for
Gaussian Projections
Provides Datasets About Australian Politicians
An Interface to the 'AutoDesk' 'API' Platform
Automated Hierarchical Multiple Regression with Assumptions
Checking
Automated Transcriptome Classifier Pipeline: Comprehensive
Transcriptome Analysis
An Interpretable Machine Learning-Based Automatic Clinical Score
Generator
Builds Stepwise GLMs via Train and Test Approach
Development of Visualization Tools for Protein Sequence
Minimum Distance Estimation in Autoregressive Model
Retrieve Disease-Related Genes from Public Sources
Calculate the Inertial Properties of a Flying Bird
Include Azure Application Insights in Shiny Apps
Authentication Services for Azure Active Directory
Interface to 'Container Instances', 'Docker Registry' and
'Kubernetes' in 'Azure'
Interface to the 'Azure Cosmos DB' 'NoSQL' Database Service
Interface to 'Kusto'/'Azure Data Explorer'
Discover, Publish and Consume Web Services on Microsoft Azure
Machine Learning
Interface with Azure Machine Learning Datasets, Experiments and
Web Services
Interface to the Table Storage Service in 'Azure'
Interface to Azure Virtual Machine Instance Metadata
Interface to Azure Computer Vision Services
Bubble Chart to compare Biological Annotations by using DAVID
Bubble Chart to Compare Biological Annotations by using DAVID
Bayesian Analysis of Computer Code Output
Bayesian Analysis of Computer Code Output (BACCO)
Bayesian Augmented Control for Clinical Trials
Sensitivity of the Bayesian Adjustment for Confounding (BAC)
algorithm to the choice of hyperparameter omega.
Choice of the Hyperparameter Omega in the Bayesian Adjustment
for Confounding (BAC) Algorithm
Bayesian Analysis of Differential Expression in RNA Sequencing
Data
Fully Bayesian Analysis of Differential Expression in RNA
Sequencing Data
Bayesian Average Error approach to Sample Size Determination
A Binary Regression Adaptive Goodness-of-Fit Test (BAGofT)
Expression RNA-Seq Data Analysis Based on Linear Mixed Model
Bayesian Association Model for Genomic Data with Missing
Covariates
Analysis and visualization of macroevolutionary dynamics on
phylogenetic trees
Analysis and Visualization of Macroevolutionary Dynamics on
Phylogenetic Trees
Working with Car Parking Data for Bath and North East Somerset
BANOVA: Hierarchical Bayesian ANOVA Models
A Bayesian Repulsive Biclustering Model for Periodontal Data
Access and Import Data from the French Open Data Portal
Bayesian Model Averaging using Bayesian Adaptive Sampling
Bayesian Variable Selection and Model Averaging using Bayesian
Adaptive Sampling
BASIX: An efficient C/C++ toolset for R.
Classification of mRNA and lncRNA Sequences using Complex
Network Theory
Classification of RNA Sequences using Complex Network Theory
Classification of RNA Sequences using Complex Network and
Information Theory
On Bayesian analysis of Threshold autoregressive model (BAYSTAR)
On Bayesian Analysis of Threshold Autoregressive Models
Solving and optimizing large-scale nonlinear systems
Solving and Optimizing Large-Scale Nonlinear Systems
Bayesian Estimation of Incoherent Neutron scattering Backgrounds
Bayesian Estimation of Incoherent Neutron Scattering Backgrounds
Benthic Biotic Indices Calculation from Composition Data
This package fits a Brownian bridge movement model to observed
locations in space and time.
Brownian bridge movement model for estimating the movement path
of an animal using discrete location data.
Models for Continuous Traits Evolving in Macroevolutionary
Landscapes of any Shape
Miscellaneous helper functions for B. Bischl.
Miscellaneous Helper Functions for B. Bischl
Block Coordinate Ascent with One-Step Generalized Rosen
Algorithm
Bias-corrected Bayesian Classification with Selected Features
Bias-Corrected Bayesian Classification with Selected Features
Calculation of Option Prices Based on a Universal Solution
Bayesian Structure and Causal Learning of Gaussian Directed
Graphs
Business Cycle Dating and Plotting Tools - BCDating
Business Cycle Dating and Plotting Tools
Bayesian composition estimator: estimating sample (taxonomic) composition from biomarker data
Bayesian composition estimator: estimating sample (taxonomic)
composition from biomarker data
Bayesian Composition Estimator: Estimating Sample (Taxonomic)
Composition from Biomarker Data
The Bayesian Causal Effect Estimation Algorithm
Bayesian models for cost-effectiveness analysis in the presence
of structural zero costs
Bayesian Models for Cost-Effectiveness Analysis in the Presence
of Structural Zero Costs
Clinical Trial Calculation Based on BCHM Design
A Bayesian Semiparametric Factor Analysis Model for Subtype
Identification (Clustering)
Bayesian Context Trees for Discrete Time Series
B Cell Receptor Somatik Hyper Mutation Analysis
B Cell Receptor Somatic Hyper Mutation Analysis
Bias-Corrected Estimates for Generalized Linear Models for
Dependent Data
A Dirichlet Process Mixture Model for Clustering Longitudinal
Gene Expression Data
Efficient Determination of Sample Size in Balanced Design of
Experiments
Bayesian Adaptive Designs for Phase II Trials with Binary
Endpoint
Bayesian Inference for Discrete Weibull Regression
Gaussian Graphical Model selection based on birth-death MCMC
methodology
Gaussian Graphical Model determination based on birth-death MCMC
methodology
Graph estimation based on birth-death MCMC approach
Graph Estimation Based on Birth-Death MCMC Approach
Bayesian Graph Selection Based on Birth-Death MCMC Approach
Bayesian undirected graph estimation with BD-MCMC
Bayesian Structure Learning in Graphical Models using
Birth-Death MCMC
Bayesian undirected graph estimation with BDMCMC algorithm
Graph determination based on BD-MCMC algorithm
Graph determination based on birth-death MCMC
Graph selection based on birth-death MCMC
Biometric Exploratory Analysis Creation House
Bayesian Estimate of Age-specific Nest Survival Probabilities
Disentangles the effects of geographic and ecological isolation
on genetic differentiation
Quantifies effects of geo/eco distance on genetic
differentiation
Quantifies Effects of Geo/Eco Distance on Genetic
Differentiation
Matrices Backed by Binary PED Files (PLINK)
Extract Genotypes from a PLINK .bed File
Multivariate Conditional Volatility Modelling and Forecasting
Bayesian Estimation Supersedes the t-Test
Search and Download Data from the Swiss Federal Statistical
Office (BFS)
Get Data from the Swiss Statistical Office
Flexible Bayes Factor Testing of Scientific Expectations
A Suite of Packages for Analysis of Big Genomic Data
Bayesian Genomic Linear Models Applied to GE Genome Selection
Estimates hazard and survival functions from a Bayesian
nonparametric view.
Markov beta and gamma processes for modelling hazard rates.
Markov beta and gamma processes for modeling hazard rates
Markov Beta and Gamma Processes for Modeling Hazard Rates
Block Gibbs Sampler with Incomplete Multinomial Distribution
Estimate the Burden of Healthcare-Associated Infections
Useful Functions for Box, Hunter and Hunter II
Bayesian hierarchical multi-subject multiscale analysis of
functional MRI data.
Bayesian Hierarchical Multi-Subject Multiscale Analysis of
Functional MRI Data
Bayesian Hierarchical Multi-Subject Multiscale Analysis of
Functional MRI (fMRI) Data
Uncertainty Quantified Matrix Completion using Bayesian
Hierarchical Matrix Factorization
Structural Bayesian Vector Autoregression Models
Bayesian Multi-Plate High-Throughput Screening of Compounds
Blinding Assessment Indexes for Randomized, Controlled, Clinical
Trials
Integrative Inference of De Novo Cis-Regulatory Modules
Tools for Accessing the Botanical Ecology and Information
Network Database
Tools for Accessing the Botanical Information and Ecology
Network Database
Some Tools for Survey Statistics in Educational Assessment,
Developed by BIFIE
Tools for Survey Statistics in Educational Assessment
Case-Control Analysis of Multi-Allelic Loci
Biochemically Intuitive Generalized Loewe Model
Bootstrap Inference for Network COstruction
Estimate the Correlation Between Two Irregular Climate Time
Series
Estimate the Correlation Between Two Irregular Time Series
Bayesian BIN (Bias, Information, Noise) Model of Forecasting
Utilities for the BIOM (Biological Observation Matrix) Format
Estimating Above-Ground Biomass and Its Uncertainty in Tropical
Forests
Estimating Aboveground Biomass and Its Uncertainty in Tropical
Forests
Multilevel Modeling of Dendroclimatical Fluctuations
BIPOD (Bayesian Inference for Partially Observed diffusions)
Biodiversity Information Review and Decision Support
Programmatic Access to Bank for International Settlements Data
Download Data from the Bank for International Settlements (BIS)
Black-Litterman and copula-opinion pooling frameworks
Black-Litterman and Copula Opinion Pooling Frameworks
Impute and Analyze Data with Observations Below the Limit of
Quantification
Impute and Analyze Data with BLOQ Observations
Stochastic Rainfall Generator Bartlett-Lewis Rectangular Pulse
Model
Interactive Document for Working with Binary Logistic Regression
Analysis
Multivariate Extremes: Bayesian Estimation of the Spectral
Measure
Multivariate Extremes: Bayesian estimation of the spectral
measure.
The pseudo-likelihood method for pairwise binary markov networks
An Implementation of the Bayesian Markov (Renewal) Mixed Models
Bayesian Models for Rare Variant Association Analysis
Bayesian Model Selection under Constraints
Bayesian Approach for MTAR Models with Missing Data
Bayesian Multi-Trait Multi-Environment for Genomic Selection
Analysis
Hybrid Trait Evolution under Brownian Motion
Comparative Methods for Phylogenetic Networks
Miscellaneous Functions for Panel Data, Quantiles, and Printing
Results
Data Generator based on Bayesian Network Model
Bayesian Neural Network for High-Dimensional Nonlinear Variable
Selection
Bayesian Nonparametric Model for Clustering with Mixed Scale
Variables
Bayesian Nonparametric Method for Mediation
A Bayesian Nonparametric Algorithm for Time Series Clustering
Ferguson-Klass type algorithm for posterior normalized random
measures
Ferguson-Klass Type Algorithm for Posterior Normalized Random
Measures
Algorithms for Pitman-Yor Process Mixtures
Bayesian Non- and Semi-parametric Model Fitting
Bayesian Non- and Semi-Parametric Model Fitting
Bayesian Non- And Semi-Parametric Model Fitting
Pathway Enrichment Analysis Based on Bayesian Network
Bacterium and virus analysis of Orthologous Groups (BOG) is a
package for identifying differentially regulated genes in the
light of gene functions.
Bacterium and Virus Analysis of Orthologous Groups (BOG) is a
Package for Identifying Differentially Regulated Genes in the
Light of Gene Functions
Bayesian Optimal Interval Design for Phase I Clinical Trials
Bayesian Optimal INterval (BOIN) Design for Single-Agent and
Drug-Combination Phase I Clinical Trials
Bayesian Optimal INterval (BOIN) Design for Single-Agent and
Drug- Combination Phase I Clinical Trials
Best Orthogonalized Subset Selection (BOSS)
Bayesian Phylogeographic and Ecological Clustering
Bayesian Prediction with High-order Interactions
Bayesian Purity Model to Estimate Tumor Purity
BRACoD: Bayesian Regression Analysis of Compositional Data
Brain Cell Type Specific Gene Expression Analysis
Computation of BRINDA Adjusted Micronutrient Biomarkers for
Inflammation
Fast Inference for Large Spatial Datasets using BRISC
OpenBUGS and its R / S-PLUS interface BRugs
R interface to the OpenBUGS MCMC software
Interface to the 'OpenBUGS' MCMC Software
The Bayesian Spatial Bradley--Terry Model
Bayesian Survival Model with Lasso Shrinkage Using Generalized
Weibull Regression
Bayesian Survival Model using Generalized Weibull Regression
Bayesian Synthetic Likelihood with Graphical Lasso
Bayesian Proposal to Fit Spatial Econometric Models
Bayesian Spatial Blind Source Separation
Asymptotic covariance matrices of some BSS mixing and unmixing
matrix estimates.
Asymptotic Covariance Matrices of Some BSS Mixing and Unmixing
Matrix Estimates.
Asymptotic Covariance Matrices of Some BSS Mixing and Unmixing
Matrix Estimates
Blind Source Separation for Multivariate Spatial Data using
Eigen Analysis
Whitening Data as Preparation for Blind Source Separation
Fitting a Log-Binomial Model using the Bekhit-Schöpe-Wagenpfeil
(BSW) Algorithm
Safety Assessment in Agricultural Field Trials
Statistical methods for safety assessment in agricultural field trials
Statistical methods for safety assessment in agricultural field
trials
Modelling Heterogeneity in Paired Comparison Data
Training and Analysing Asynchronous Boolean Models
Implementing BTYD Models with the Log Sum Exp Patch
Probabilistic Models for Assessing and Predicting your Customer
Base
Bradley-Terry Model with Exponential Time Decayed Log-Likelihood
and Adaptive Lasso
Bias and Uncertainty Corrected Sample Size
Bayesian Variant Selection: Bayesian Model Uncertainty
Techniques for Genetic Association Studies
Bayesian Variable Selection in High Dimensional Settings using
Non-Local Prior
Bayesian Variable Selection in High Dimensional Settings using
Nonlocal Priors
Baumgartner Weiss Schindler Test of Equal Distributions
The Bayesian Bootstrap Predictive Mean Matching Package -
Multiple and single imputation for discrete data
Bayesian Bootstrap Predictive Mean Matching - Multiple and
single imputation for discrete data
Bayesian Bootstrap Predictive Mean Matching - Multiple and
Single Imputation for Discrete Data
Functions and datasets for books by Jeff Gill.
Functions and Datasets for Books by Jeff Gill
Functions and Datasets for "Bayesian Methods: A Social and
Behavioral Sciences Approach"
Bayesian Model Optimized Reference Correction Method for
Assigned and Unassigned Protein NMR Spectra
Bayesian Prediction of Stochastic Processes
A package for estimating age-specific survival from incomplete
capture-recapture/recovery data
Age-Specific Survival Analysis from Incomplete
Capture-Recapture/Recovery Data
Bayesian Model to Archaeological Faunal Skeletal Profiles
Bayesian Tensor Factorization Linked to External Data
Modeling Framework for Cellular Communities in their
Environments
Balance Check for Multiple Covariates in Matched Observational
Studies
Balanced and spatially balanced sampling
Balanced and Spatially Balanced Sampling
Statistical Inference and Sure Independence Screening via Ball
Statistics
Species Identification using DNA Barcodes
Variable Selection Using Bayesian Additive Regression Trees
Regularized Wasserstein Distances and Barycenters
Analysis and Visualization of Basketball Data
Statistical experiments on batch computing clusters.
Statistical Experiments on Batch Computing Clusters
Downloads and Organizes Financial Data for Multiple Tickers
Software for the Creation of High Density Linkage Maps in
Outcrossing Species
Bayesian Feature Allocation Model for Tumor Heterogeneity
Bayesian analysis of haplotype association using Markov Chain
Monte Carlo
R Functions for Bayesian Hazard Rate Estimation
Chronological Bayesian Models Integrating Optically Stimulated
Luminescence and Radiocarbon Age Dating
Bayesian Analysis of Significantly Mutated Genes in Cancer
Bayesian Estimation of Bivariate Volatility Model
Bayesian Estimation using Bernstein Polynomial Fits Rate Matrix
Bayesian Estimation of Mixtures of Multivariate Bernoulli
Distributions
Bayesian analysis of censored linear regression models with
scale mixtures of normal (SMN) distributions.
Bayesian Analysis of Censored Regression Models Under Scale
Mixture of Skew Normal Distributions
Two Arm Bayesian Clinical Trial Design with and Without
Historical Control Data
Functions and Datasets for the book "Bayesian Data Analysis"
Bayesian Single-Arm Design with Survival Endpoints
Computation of Bayes factors for simple psychological designs
Computation of Bayes factors for simple designs
Computation of Bayes Factors for Common Designs
Computation of Bayes factors for common designs
Bayesian Analysis of Generalized Elliptical Semiparametric
Models
Bayesian Analysis of Generalized Elliptical Semi-parametric
Models
Bayesian Analysis of Generalized Elliptical Semiparametric
Models and Flexible Measurement Error Models.
Bayesian Analysis of Generalized Elliptical Semi-Parametric
Models and Flexible Measurement Error Models
Bayesian Modeling via Frequentist Goodness-of-Fit
Fast Bayesian Gaussian Process Regression Fitting
Bayesian Grouped Weighted Quantile Sum Regression
Bayesian Regression Model with Mixture of Two Scaled Inverse Chi
Square as Hyperprior
Designing Bayesian Multi-Arm Multi-Stage Studies
Bayesian Multi-Resolution Gaussian Process Approximations
Bayesian Preference Learning with the Mallows Rank Model
Bayesian Data Reconciliation of Separation Processes
Default Bayesian Hypothesis Tests for Correlation, Partial
Correlation, and Mediation
Default Bayesian hypothesis tests for correlation, partial
correlation, and mediation
Bayesian Mixture Survival Models using Additive
Mixture-of-Weibull Hazards, with Lasso Shrinkage and
Stratification
Testing and Detecting Multimodality using Bayesian Methods
BayesNI: Bayesian Testing Procedure for Noninferiority with
Binary Endpoints
Bayesian Analysis of Non-Stationary Gaussian Process Models
Bayesian Group Sequential Design for Ordinal Data
Bayesian Methods for Panel Data Modeling and Inference
Variable Selection in a Hierarchical Bayesian Model for a Hazard
Function
Hierarchical Bayesian Model for a Hazard Function
Generate Postestimation Quantities for Bayesian MCMC Estimation
Fast Projection Direction for Multivariate Changepoint Detection
Bayesian multi-locus QTL analysis based on the BIC criterion
Bayesian Robust Generalized Mixed Models for Longitudinal Data
Bayes Factors for Hierarchical Linear Models with Continuous
Predictors
Fits the Bayesian Piecewise Linear Log-Hazard Model
Bayesian Variable Selection Using Simplified Shotgun Stochastic
Search with Screening (S5)
Bayesian Analysis of Small Area Estimation
Bayesian Spatial Split Population Survival Model
Bayes Linear Estimators for Finite Population
Different Models of Posterior Distributions of Adjusted Odds
Ratio
Computation of Bayes factors for interrupted time-series designs
MCMC Sampling of Bayesian Linear Models via Summary Statistics
Bayesian Survival Analysis for Right Censored Data
Bayesian Analysis of Item-Level Twin Data
Bayesian Variable selection in Linear Models
Bayes Factors, Model Choice And Variable Selection In Linear
Models
Bayes Factors, Model Choice and Variable Selection in Linear
Models
R Utilities Accompanying the Software Package BayesX
R Package Distribution of the BayesX C++ Sources
Bayesian Melding of GPS and DR Path for Animal Tracking
Predict Brain Asymmetry Based on Handedness and Dichotic
Listening
Sample Size and Power for Comparing Inequality Constrained
Hypotheses
Plot Positive and Negative Predictive Values for Medical Tests
General-Purpose MCMC and SMC Samplers and Tools for Bayesian
Statistics
Bayesian Beta regression: joint mean and precision modeling
Bayesian Gamma Regression: Joint Mean and Shape Modeling
Bayesian t Regression for Modeling Mean and Scale Parameters
Bayesian thresholds mixed-effects models for categorical data
Bayesian thresholds mixed-effects models for categorial data
R Package for Baylor University Educational Psychology
Quantitative Courses
Create chronologies based on radiocarbon and non-radiocarbon dated depths
Bayesian chronologies via compound Poisson-Gamma processes.
Bayesian radiocarbon chronologies and relative sea level
analysis
Radiocarbon dating, age-depth modelling, relative sea level rate
estimation, and non-parametric phase modelling
Radiocarbon Dating, Age-Depth Modelling, Relative Sea Level Rate
Estimation, and Non-Parametric Phase Modelling
Bayesian Palaeoclimate Reconstruction from Pollen
Bayesian Palaeoclimate Reconstruction from Pollen Data
Best Subset Selection for Sparse Generalized Linear Model and
Cox Model
Best Subset Selection in Linear, Logistic and CoxPH Models
Best Subset Selection /Ridge Regression in Linear, Logistic,
Poisson and CoxPH Models
General Unified Threshold Model of Survival for Bees using
Bayesian Inference
Benchmark and frontier analysis using DEA and SFA
Benchmark and frontier analysis using DEA and SFA (BeDS)
Benchmark and Frontier Analysis Using DEA and SFA
Statistical Tests for Evaluating Conformity to Benford's Law
Bayesian inference for exponential random graph models
Bayesian analysis for exponential random graph models
Bayesian Exponential Random Graph Models
R Emulation of Berkeley Earth Surface Temperature
Data Input for Berkeley Earth Surface Temperature
Bessel -- Bessel Functions Computations and Approximations
Computations and Approximations for Bessel Functions
Bayesian Estimation of Intervention Effects
Mini Games from Adventures of Beta and Bit
Calculate Power and Sample Size with Beta Regression
Better Statistics for OLS and Binomial Logistic Regression
Bayesian Evaluation of Variant Involvement in Mendelian
Disorders
Bayesian Evaluation of Variant Involvement in Mendelian Disease
Compare the Goodness of Fit of Benford's and Blondeau Da Silva's
Digit Distributions to a Given Dataset
R Wrapper for Java Implementation of BiBit
Bayesian Inference for Directed Acyclic Graphs (BiDAG): Software
for the Efficient Inference and Sampling of Bayesian Networks
Bayesian Inference for Directed Acyclic Graphs (BiDAG)
Bayesian Inference for Directed Acyclic Graphs
Calculates the bidimensional regression between two 2D
configurations
Calculates the Bidimensional Regression Between Two 2D
Configurations
Bayesian Aggregation in Genomic Applications
Creates an interface to BiGG database, provides a framework for
simulation and produces flux graphs
Feature Identification Between Metabolome and Microbiome in
Disease and Health
Bivariate Probit with Partial Observability
Toolkit to identify synthetic lethality and cell line resistance
relationships based on bimodality in gene expression data.
Toolkit to Identify Candidate Synthetic Lethality
Toolkit To Identify Candidate Synthetic Lethality
Binarization and Trinarization of One-Dimensional Data
A GUI to Correct Measurement Bias in DNA Methylation Analyses
Plot Functions for JIF (Journal Impact Factor) and Paper
Percentiles
Statistical Methods and Algorithms for Big Data
Big Quadratic Inverse Covariance Estimation
Constructing Large Systems of Structural Equations
Top Scoring Pair based methods for classification
Dimension Reduction Methods for Multivariate Time Series
Calculation for Single Arm Group Sequential Test with Binary
Endpoint
Processes Binary Data Obtained from Fragment Analysis
Processes Binary Data Obtained from Fragment Analysis (Such as
AFLPs, ISSRs, and RFLPs)
Data Generation with Binary and Continuous Non-normal Components
Data Generation with Binary and Continuous Non-Normal Components
Simultaneous generation of multivariate binary and normal
variates.
Simultaneous Generation of Multivariate Binary and Normal
Variates
Concurrent Generation of Binary, Ordinal and Continuous Data
Analyzing Replicated ChIP Sequencing Data Using Quasi-Likelihood
Piecewise Smooth Regression by Bootstrapped Binary Segmentation
Creates, Merges, and Reads Binary Dosage Files
Variable Selection for Binary Data Using the EM Algorithm
Mean and Variance Modeling of Binary Data
Threshold Cut Point of Probability for a Binary Classifier Model
Interactive Circular Visualization of Genomic Data using
'htmlwidgets' and 'BioCircos.js'
Biodiversity Assessment Using Functional Tools
BioGeography with Bayesian (and likelihood) Evolutionary
Analysis in R Scripts
BioGeography with Bayesian (and Likelihood) Evolutionary
Analysis in R Scripts
Find biomarkers in two-class discrimination problems
Find Biomarkers in Two-Class Discrimination Problems
Generating Various Molecular Representations for Chemicals,
Proteins, DNAs, RNAs and Their Interactions
Biomarker Prognostic Enrichment Tool for Time-to-Event Trial
Exercices et problèmes de statistique avec le logiciel R
Create Area-Proportional Venn Diagrams from Biological Lists
Access the Bioconductor Project Package Repository
Feature Selection and Classification with the Embedded
Validation Procedures for Biomedical Data Analysis
GUI for biodiversity and community ecology analysis
GUI for biodiversity, suitability and community ecology analysis
Package for Community Ecology and Suitability Analysis
Modelling and Forecasting Biological Invasions
Paired (pBI) and Unpaired Biomarker Identifier (uBI) including a
method to infer networks.
Identification of Impulse-Like Gene Expression Changes in Short
Genomic Series Data
From Biological Sequences and Simulations to Correlation
Analysis
Partition Bipartite Network into Non-Overlapping Biclusters by
Optimizing Bipartite Modularity
Decomposition of Bulk Expression with Single-Cell Sequencing
Bivariate Alternating Recurrent Event Data Analysis
Tolerance Intervals and Errors-in-Variables Regressions in
Method Comparison Studies
Tolerance Interval and EIV Regression - Method Comparison
Studies
Generation of Bivariate Uniform Data and Its Relation to
Bivariate Binary Data
Estimating the Parameters of Some Bivariate Distributions
Processing Raw Black Carbon Concentration
Blaker's Binomial and Poisson Confidence Limits
Plots (slightly extended) Bland-Altman plots
Plots (Slightly Extended) Bland-Altman Plots
Calculate and Analyze Blau statuses for measuring social
distance
Calculate and Analyze Blau Status for Measuring Social Distance
Calculate and Analyze Blau Status for (Covert) Organizations
Calculate and Analyze Blau Statuses for Measuring Social
Distance
Joint Analysis of Experiments with Mixtures and Random Effects
Estimation of Large Block Covariance Matrices
Bayesian Calculation of Region-Specific Fixation Index to Detect
Local Adaptation
Creates strings that show a text message in 8 by 8 block letters
GUI for the Generalised Blockmodeling of Valued Networks
Statistical Comparisons with Distance-Function Based Permutation
Tests
Blyth-Still-Casella Exact Binomial Confidence Intervals
Bayesian Sampling for Stick-breaking Mixtures
Bayesian Sampling for Stick-Breaking Mixtures
a Bunch of Structure and Sequence Analysis
A Bunch of Structure and Sequence Analysis
Board Games and Tools for Building Board Games
Boosting Diversity in Regression Ensembles
Functions for Elementary Bayesian Inference
An Improved Multiple Testing Procedure for Controlling False
Discovery Rates
Fixed Coupon Bond Valuation Allowing for Odd Coupon Periods and
Various Day Count Conventions
Optimal Estimation of Partially Observed Boolean Dynamical
Systems
Generation, reconstruction, simulation and analysis of Boolean
networks
Generation, reconstruction, simulation and analysis of
synchronous, asynchronous, and probabilistic Boolean networks
Construction, Simulation and Analysis of Boolean Networks
Boosting for Multivariate Longitudinal Response
Boosting for Multivariate Longitudinal Responses
Bootstrapping test for chromosomal localization
Bootstrap-MRMR Technique for Informative Gene Selection
Bootstrap Prediction Intervals and Bias-Corrected Forecasting
Adjusting for Optimism in 'glmnet' Regression using
Bootstrapping
Test Stationarity using Bootstrap Wavelet Packet Tests
Bootstrap cis-QTL Method that Corrects for the Winner's Curse
Boruta -- a tool for finding significant attributes in
information systems
A wrapper algorithm for all-relevant feature selection
Wrapper Algorithm for All-Relevant Feature Selection
Wrapper Algorithm for All Relevant Feature Selection
Bound on the Error of the First-Order Edgeworth Expansion
Functions to Create Publication-Quality Plots
Bradley-Terry Models -- this package is now deprecated in favour
of 'BradleyTerry2'
Fits the Bradley-Terry Model to Potentially Large and Sparse
Networks of Comparison Data
Inference the Partial Correlations Based on Time Series Data
Glm Fitting and Variable Selection using 'RcppArmadillo'
Efficient Branch and Bound Variable Selection for GLMs using
'RcppArmadillo'
Simulation and Estimation for Branching Processes
Download and Processing of Automatic Weather Stations (AWS) Data
of INMET-Brazil
Bayesian analysis of quantile regression models.
Bayesian Analysis of Quantile Regression Models
Normalisation Tools for Inter-Condition Variability of ChIP-Seq
Data
Bayes Screening and Model Discrimination
A Deep Learning Package for Statistical Classification Analysis
A Deep Learning for Statistical Classification and Regression
Analysis with Random Effects
A Deep Learning for Statistical Classification and Regression
Analysis
System for Building and Debugging C/C++ Dynamic Libraries
Calculates Business Duration Between Two Dates
Bandwidth Selectors for Local Linear Quantile Regression
Dataset of Regional COVID-19 Deaths per 100,000 Pop (NUTS)
C5.0 Decision Trees and Rule-Based Models
Cross-Species Analysis of Cell Identities, Markers and
Regulations
This package performs the CADF unit root test proposed in Hansen (1995).
Hansen's Covariate-Augmented Dickey-Fuller (CADF) Test
This package performs the CADF unit root test proposed in Hansen
(1995).
A Package to Perform Covariate Augmented Dickey-Fuller Unit Root
Tests
Provides a GUI to several statistical methods for biological inferences
Provides a GUI to several statistical methods useful for causal assessment.
Provides a GUI to several statistical methods useful for causal
assessment.
Provides a GUI to Several Statistical Methods
Analyzes Differential Promoter Composition in CAGE data
Comparison of Algorithms with Iterative Sample Size Estimation
Comparative Analysis with Annotation-Based Genomic Components
Multiple imputation using MICE and Random Forest
Multiple Imputation Using MICE and Random Forest
R interface to Fortran 77 implementation of CALINE3
Finite Mixture Models and meta-analysis tools - based on C.A.MAN
Finite Mixture Models and Meta-Analysis Tools - Based on C.A.MAN
Cell-Typing using Variance Adjusted Mahalanobis Distances with
Multi-Labeling
Directly Extracts Complete CANSIM Data Tables
Directly Extracts Complete CANSIM Data Tables / Extrait Des
Tableaux CANSIM Directement
Spatial Generalised Linear Mixed Models for Areal Unit Data
Poisson Log-linear Models with Spatio-temporal Random Effects
Spatio-Temporal Generalised Linear Mixed Models for Areal Unit
Data
Data Sets Used in the Vignette Accompanying the CARBayes Package
Data Used in the Vignettes Accompanying the CARBayes and
CARBayesST Packages
Statistical package for population size estimation in
capture-recapture models.
Ecological Quality Ratios Calculation and Plot
Predicting Categorical and Continuous Outcomes Using Rule of Ten
Predicting Categorical and Continuous Outcomes Using One in Ten
Rule
Covariate Assisted Ranking and Screening for Large-Scale
Two-Sample Inference
Reparameterized and marginalized posterior sampling for
conditional autoregressive models
Reparameterized and marginalized posterior sampling for
conditional autoregressive models, OpenCL implementation
Covariate Assisted Spectral Clustering on Ratios of Eigenvectors
Detection of Statistically Significant Combinations of SNPs in
Association Mapping
'caret' Applications for Spatial-Temporal Models
Computation of the p-Value for the Exact Conditional
Cochran-Armitage Trend Test
Chronomics Analysis Toolkit (CAT): Analyze Periodicity
Chronomics Analysis Toolkit (CAT): Periodicity Analysis
Cambial Activity and wood formation data processing,
VIsualisation and Analysis using R
Cambial Activity and wood formation data processing,
visualisation and analysis using R
Collection of Functions for Processing, Visualizing and
Analyzing Cambial Activity and Wood Formation Monitoring Data
Graphical Aid in Correspondence Analysis Interpretation and
Significance Testings
CRISPR Pooled Screen Analysis using Beta-Binomial Test
Compare Baseline Characteristics Between Groups
R Package for Covariate Balancing Propensity Score
Fits Cubic Bezier Spline Functions to Intertemporal and Risky
Choice Data
Bayesian canonical correlation analysis and group factor
analysis
Bayesian Canonical Correlation Analysis and Group Factor
Analysis
Simulate Congruence Class Model for Networks
Clustering through "Correlation Clustering Model" (CCM) and
cluster analysis tools.
Significance Tests for Canonical Correlation Analysis (CCA)
Cultural Consensus Theory applications to data
Consensus Analysis, Model-Based Clustering, and Cultural
Consensus Theory Applications
Perform Weighted Linear Regression for Calibration Curve
One and two locus GWAS of binary phenotype with
case-control-population design
Retrieve Historical and Near Realtime Data from CDEC
Retrieve Data from the California Data Exchange Center
Evaluate Differentially Private Algorithms for Publishing
Cumulative Distribution Functions
Downscaling and Bias Correction via Non-Parametric CDF-Transform
Coordinate Descent Algorithms for Lasso Penalized L1, L2, and
Logistic Regression
Components of Canadian Monetary Aggregates
Components of Canadian Monetary and Credit Aggregates
Phylogenetically Classifies Retention Mechanisms of Duplicate
Genes from Gene Expression Data
A Complete Deconvolution Method using Sequencing Data
Statistical inference of C- and D-vine copulas
Statistical Inference of C- And D-Vine Copulas
Sampling from Conditional C- and D-Vine Copulas
Cost-Effectiveness Analysis using Markov Models
CRISPR Screen and Gene Expression Differential Analysis
Simple and Efficient Pipeline for Electronic Health Record
Annotation
Climate and Ecological Niche Factor Analysis
Datasets of the CEO (Centre d'Estudis d'Opinio) for Opinion
Polls in Catalonia
Causal Effect Random Forest of Interaction Tress
Cross-Entropy R Package for Optimization
Colony Formation Assay: Taking into Account Cellular Cooperation
Cause-Specific Framework for Competing-Risk Analysis
Simple Similarity for User-Based Collaborative Filtering Systems
Collaborative Filtering by Reference Classes
Continuous Glucose Monitoring Data Analyzer
Powell Miscellaneous Functions for Teaching and Learning
Statistics
Closest History Flow Field Forecasting for Bivariate Time Series
Chemical Thermodynamics and Activity Diagrams
Thermodynamic Calculations and Diagrams for Geochemistry
Cluster Independent Algorithm for Rare Cell Types Identification
Meta-Clustering for Single-Cell Data Integration and Evaluation
Generative models for networks with conditionally independent
dyadic structure
Generative models for complex networks with conditionally
independent dyadic structure
Generative Models for Complex Networks with Conditionally
Independent Dyadic Structure
Estimating and Testing Direct Effects in Directed Acyclic Graphs
using Estimating Equations
Weighted summary of cumulative incidence functions
Causal Inference for Multiple Treatments with a Binary Outcome
Classification International Normalized of Education
Deciphering Central Informative Nodes in Network Analysis
Co-Information based N-Order Epistasis Detector and Visualizer
Computationally-Efficient Confidence Intervals for Mean Shift
from Permutation Methods
Covariates, Interaction, and Selection for DGLM
Common and Individual Structure Explained for Multiple Graphs
Copula-Based Joint Analysis of Multiple Phenotypes
Composite Kernel Association Test for Pharmacogenetics Studies
Composite Kernel Machine Regression Based on Likelihood Ratio
Test
Forward-in-Time Simulation and Tallying of Pairwise
Relationships
CLAG: an unsupervised non hierarchical clustering algorithm
handling biological data
An unsupervised non hierarchical clustering algorithm handling
biological data
Exact Confidence Limits after a Sequential Trial
Constrained Inference for Linear Mixed Effects Models.
Constrained Inference for Linear Mixed Effects Models
Interactive Document for Working with Cluster Analysis
Tools for Customer Lifetime Value Estimation
Commercial Modular Aero-Propulsion System Simulation Data Set
Reusable Assisting Functions for Child Mortality Estimation
Calibrated Model Fusion Approach to Combine Surrogate Markers
Control Charts for Conway-Maxwell-Poisson Distribution
Interactive Document for Working with Confusion Matrix
Representation Tool For Output Of Connectivity Map (CMap)
Analysis
Matching Algorithms for Causal Inference with Clustered Data
Common Network Asset Indices Methodology (CNAIM)
Complex-Valued Wavelet Lifting for Signal Denoising
Complex-Valued Wavelet Lifting for Univariate and Bivariate Time
Series Analysis
Dirichlet-Multinomial Modelling of Relative Abundance Data
Dirichlet Multinomial Modeling of Relative Abundance Data
A Versatile Toolkit for Copy Number Variation Relationship Data
Analysis and Visualization
Association Analysis of CNV Data and Imputed SNPs
Example data sets for association analysis of CNV data
pre-process DNA copy number (CN) data for detection of CN events
Pre-process DNA Copy Number (CN) Data for Detection of CN Events
Pre-Process DNA Copy Number (CN) Data for Detection of CN Events
Fast Algorithms for Frequency-Preserving Null Models in Ecology
COmbat CO-Normalization Using conTrols (COCONUT)
Composite Indicator Construction and Analysis
Causal Discovery for Categorical Data with Label Permutation
A Combined Association Test for Genes using Summary Statistics
Synergy/Antagonism Analyses of Drug Combinations
Coarsened Mixtures of Hierarchical Skew Kernels
Copy Number Profile Curve-Based Association Test
Variables selection for index models via correlation pursuit
Tools for processing COPAS large-particle flow cytometer data
The COR for Optimal Subset Selection in Distributed Estimation
CORElearn - classification, regression, feature evaluation and
ordinal evaluation
Classification, regression, feature evaluation and ordinal
evaluation
Classification, Regression and Feature Evaluation
The Clustering of Regression Models Method
Multivariate Correlation Estimator and Statistical Inference Procedures.
The package provides multivariate correlation estmation and sets of statsitical inference procedures.
Multivariate Correlation Estimator and Statistical Inference
Procedures.
Copula-Based Semiparametric Models for Spatio-Temporal Data
Functions, data and code for count data.
A Residue-Residue Contact Detecting Method
Coronavirus COVID-19 (2019-nCoV) Data Acquisition and
Visualization
Coronavirus COVID-19 (2019-nCoV) Epidemic Datasets
Downloading, Reading and Analysing PNAD COVID19 Microdata
Downloading, Reading and Analyzing PNAD COVID19 Microdata
Constrained Zero-Inflated Generalized Additive Model
Constrained Zero-Inflated Generalized Additive Model with Model Selection Criterion
Constrained and Unconstrained Zero-Inflated Generalized Additive Models with Model Selection Criterion
Constrained and Unconstrained Zero-Inflated Generalized Additive
Models with Model Selection Criterion
Bayesian Meta Analysis for Studying Cross-Phenotype Genetic
Associations
Concordance probability estimates in survival analysis
Concordance Probability Estimates in Survival Analysis
Find the maximum likelihood estimator of the shape constrained
hazard baseline and the effect parameters in the Cox
proportional hazards model
Correction of the pvalue after multiple coding
Correction of the P-Value after Multiple Coding in Generalized
Linear Models
Conceptual Properties Norming Studies as Parameter Estimation
Composition of Probabilistic Preferences (CPP)
Nonparametric Change Point Estimation for Survival Data
Power Calculation for Weighted Log-Rank Tests in Cure Rate
Models
Compute Cluster Robust Standard Errors with Degrees of Freedom
Adjustments
Congruent Rate Analyses in Birth-Death Scenarios
RStudio Addin for Searching Packages in CRAN Database Based on
Keywords
Interpretable Subgroups Identification Through Ensemble Learning
of Causal Rules
Clustering of Genomic Regions Analysis Method
Calibrated Ratio Estimator under Double Sampling Design
Mixture Cure Generalized Odds Ratio Frailty Models for Clustered
Current Status Data
Continual Reassessment Method (CRM) for Phase I Clinical Trials
Bayesian Nonparametric Chinese Restaurant Process Clustering
with Entropy
Conditional Randomization Testing (CRT) Approach for Conjoint
Analysis
Sample Size Estimation Functions for Cluster Randomized Trials
Doubly Robust Inverse Probability Weighted Augmented GEE
Estimator
Changing the Reference Group without Re-Running the Model
Covariance Based Decomposition of Bulk Expression with
Single-Cell Sequencing
Covariance Based Single-Cell Decomposition of Bulk Expression
Data
Fitting and Tuning Regularized Cause-Specific Cox Models with
Elastic-Net Penalty
CRISPR-Based Salmonella Enterica Serotype Analyzer
Connectivity Scores with Factor Analysis
Collecting Counter Strike Global Offensive Data
Climate Services' Indicators Based on Sub-Seasonal to Decadal
Predictions
Cost-Sensitive Multi-Criteria Ensemble Selection for Uncertain
Cost Conditions
Extract information from an html document with CSS selectors
Covariate Specific Treatment Effect (CSTE) Curve
Assessing Skill of Climate Forecasts on Seasonal-to-Decadal
Timescales
Combined Selection and Uncertainty Visualiser (CSUV)
Frequent Contiguous Sequential Pattern Mining of Text
Interactive Application for Working with Contingency Tables
A Method for 'Connecting The Dots' in Weighted Graphs
The CTFS Large Plot Forest Dynamics Analyses
A Text Mining Toolkit for Chinese Document
Interactive Document for Working with Classification Tree
Analysis
A Class of Mixture Models for Ordinal Data
Charles's Utility Function using Formula
Analyze Multivariate Phenotypes by Combining Univariate results
Analyze Multivariate Phenotypes by Combining Univariate Results
Compute Decision Interval and Average Run Length for CUSUM
Charts
Fast Cross-Validation via Sequential Testing
Regularized Estimators of Covariance Matrices with CV Tuning
Conditional Variance Estimator for Sufficient Dimension
Reduction
Estimation of the Calibration Equation with Error-in
Observations
Lasso Penalized Precision Matrix Estimation
Compute Risk Scores for Cardiovascular Diseases
Conditional Density Estimation Network Construction and
Evaluation
A Virtual Patient Simulator in the Context of Calcium and
Phosphate Homeostasis
R graphics device using cairographics library for creating high-quality PNG, PDF, SVG, PostScript output and interactive display devices such as X11.
R graphics device using cairo graphics library for creating high-quality bitmap (PNG, JPEG, TIFF), vector (PDF, SVG, PostScript) and display (X11 and Win32) output.
R graphics device using cairo graphics library for creating
high-quality bitmap (PNG, JPEG, TIFF), vector (PDF, SVG,
PostScript) and display (X11 and Win32) output.
R Graphics Device using Cairo Graphics Library for Creating
High-Quality Bitmap (PNG, JPEG, TIFF), Vector (PDF, SVG,
PostScript) and Display (X11 and Win32) Output
R graphics device using cairo graphics library for creating
high-quality bitmap (PNG, JPEG, TIFF), vector (PDF, SVG,
PostScript) and display (X11 and Win32) output
Code Calibration in a Bayesian Framework
Mapping ML Scores to Calibrated Predictions
Weighting and Estimation for Panel Data with Non-Response
Providing an Interface to the e-Shotgun Algorithm for Bayesian
Optimization
CamelUp Board Game as a Teaching Aid for Introductory Statistics
'CamelUp' Board Game as a Teaching Aid for Introductory
Statistics
Publication Quality Phylogenetic Tree Plots
Batch Correction of Single Cell Transcriptome Data
Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal
and Spatial Clonal Evolutionary History by Next-Generation
Sequencing
Functions For Statistics Classes At Carleton College
Functions for Statistics Classes at Carleton College
Carlson Elliptic Integrals and Incomplete Elliptic Integrals
Selection, Reverse-Engineering and Prediction in Cascade
Networks
Experimental Data of Cascade Experiments in Genomics
Datasetsfor Categorical Data Analysis by Agresti
Datasets for Categorical Data Analysis by Agresti
Fishery Stock Assessment by Catch Dynamic Models
Fishery Stock Assessment by Generalized Depletion Models
Fishery Stock Assessment by Catch Dynamics Models
Optimal Categorisation of Continuous Variables in Prediction
Models
Solution Paths for Linear and Logistic Regression Models with
SCOPE Penalty
Solution Paths for Linear and Logistic Regression Models with
Categorical Predictors, with SCOPE Penalty
Interface to the API 'Sede Electronica Del Catastro'
Powerful Test for Survival Data under Non-Proportional Hazards
Calculate Correlations and Estimate Causality
Methods for Estimating Causal Effects from Observational Data
Estimation of Causal Effects with Generalized Additive Models
Matching on Generalized Propensity Scores with Continuous
Exposures
Inferring Causal Effects using Bayesian Structural Time-Series
Models
Learning Stable Structures in Kinetic Systems
MBSTS Models for Causal Inference and Forecasting
Causal Inference Modeling for Estimation of Causal Effects
Make, Update, and Query Binary Causal Models
Analysis utilities for binary classification and Causata users.
Control Charts with Guaranteed In-Control Performance and
Cautious Parameters Learning
Identification and Analysis of ceRNA Regulation
Broken Adaptive Ridge Estimator for Censored Data in AFT Model
Broken Adaptive Ridge AFT Model with Censored Data
Finite Mixture of Multivariate Censored/Missing Data
Modeling Censored Data Using Mixture Regression
Censored Linear Mixture Regression Models
Fitting Normal and Student-t censored regression model.
Fits Normal and Student-t Censored Regression Model
Discriminant Analysis of Time Series in the Presence of
Within-Group Spectral Variability
Outlier detection using the iterated RMCD method of Cerioli
(2010)
Outlier Detection Using the Iterated RMCD Method of Cerioli
(2010)
Easily Install Pharmacometric Packages and Shiny Applications
Developed by Certara
Estimate quantiles using any order Cornish-Fisher expansion
Nonparametric Methods for Identifying Differential Enrichment
Regions with ChIP-Seq Data
Mack- and Munich-chain-ladder methods for insurance claims reserving
Mack-, Bootstrap and Munich-chain-ladder methods for insurance
claims reserving
Mack-, Bootstrap and Munich-chain-ladder methods for insurance claims reserving
Mack, Bootstrap, Munich and Multivariate-chain-ladder methods
for insurance claims reserving
Mack, Bootstrap, Munich, Multivariate-chain-ladder and Clark
methods for insurance claims reserving
Mack, Bootstrap, Munich, Multivariate-chain-ladder, Clark
methods and generalized linear models for insurance claims
reserving
Statistical methods for the calculation of outstanding claims
reserves in general insurance
Statistical methods and models for the calculation of
outstanding claims reserves in general insurance
Statistical Methods and Models for Claims Reserving in General
Insurance
Change Point Estimation for Clustered Signals
Markov Model for the Online Multi-Channel Attribution Problem
Markov Model for Online Multi-Channel Attribution
Shiny Web Application for the Multichannel Attribution Problem
Numerical Computation Cumulative Distribution Function and
Probability Density Function from Characteristic Function
Charge Transfer Rates and Charge Carrier Mobilities
Exploratory Chemometrics for 2D Spectroscopy
Functions Supporting Packages ChemoSpec and ChemoSpec2D
Chemometrics with R - Multivariate Data Analysis in the Natural
Sciences and Life Sciences
Processing Chill and Heat Models for Temperate Fruit Trees
Cholesky Decomposition of the Wishart Distribution
Maximum Likelihood Analysis of Circular Data
CircNNTSR: An R package for the statistical analysis of circular
data using nonnegative trigonometric sums (NNTS) models
Statistical Analysis of Circular Data using Nonnegative
Trigonometric Sums (NNTS) Models
Detecting of Outliers in Circular Regression
Detection of Outliers in Circular-Circular Regression
Spatial and Spatio-Temporal Bayesian Model for Circular Data
Circular Statistics, from "Topics in circular Statistics" (2001)
Circular Statistics, from "Topics in Circular Statistics" (2001)
Algorithm for Computation of the Intersection Areas of N Circles
Fast Silhouette on Circular or Linear Data Clusters
An RStudio Addin to Insert BibTex Citation in Rmarkdown
Documents
Visualization of structure and contents of a database
Track Flows of Water Through an Urban System
Optimal distance-based clustering for one-dimensional data
Optimal k-means clustering for one-dimensional data
Optimal k-Means Clustering for One-Dimensional Data
Optimal and Fast Univariate k-Means Clustering
Optimal, Fast, and Reproducible Univariate Clustering
Measuring Morphological Diversity and Evolutionary Tempo
Time Series Modeling for Climate Change Proxies
Classes and Methods for "Class Comparison" Problems on
Microarrays
Classes and Methods for "Class Discovery" with Microarrays or
Proteomics
Model-Based Clustering of Categorical Sequences
Mixtures of Continuous Time Markov Models
A Simple HTTP Database Interface to 'ClickHouse'
Complex-Valued Wavelet Lifting Estimators of the Hurst Exponent
for Irregularly Sampled Time Series
Climate Classification According To Several Indices
Climate Classification According to Several Indices
Climate Downscaling Library for Daily Climate Model Output
Tools for Crowdsourcing Citizen Science in Agriculture
Set of Tools to Compute Various Climate Indices
Statistical Reporting in Clinical Trials
Statistical Reporting for Scientific Publications,
Epidemiological Studies and Clinical Trials
Robust Bayesian Priors in Clinical Trials: An R Package for
Practitioners
Summary Measures for Clinical Trials with Survival Outcomes
Recalibration Methods for Improved Clinical Utility of Risk
Scores
Seeking and Finding Clones in Copy Number and Sequencing Data
Clustering and Visualization of Mixed-Type Data
Simultaneous Semi-Parametric Estimation of Clustering and
Regression
ROC Analysis in Three-Class Classification Problems for
Clustered Data
Clustering on the Torus by Conformal Prediction
Prediction and Clustering on the Torus by Conformal Prediction
Gaussian-Based Visualization of Generic Model-Based Clustering
Gaussian-Based Visualization of Gaussian and Non-Gaussian
Model-Based Clustering
Simultaneous Detection of Clusters and Cluster-Specific Genes in
High-Throughput Transcriptome Data
Clustering of Observations with Geographical Constraints
Hierarchical Clustering with Spatial Constraints
K-means clustering with build-in missing data imputation
K-Means Clustering with Build-in Missing Data Imputation
Variable Selection in Clustering by Mixture Models for Discrete
Data
Clustering of variables around Latent Variables
Clustering of Variables Around Latent Variables
Analyze Clustered Data with Generalized Linear Models using the
Cluster Bootstrap
Gaussian Mixture Models, K-Means, Mini-Batch-Kmeans and
K-Medoids Clustering
Gaussian Mixture Models, K-Means, Mini-Batch-Kmeans, K-Medoids
and Affinity Propagation Clustering
Assessment of Stability of Individual Object or Clusters in
Partitioning Solutions
Assessment of Stability of Individual Objects or Clusters in
Partitioning Solutions
Location and Visualization of Clustered Somatic Mutations
Execution of Multiple Clustering Packages
Execution of Multiple Clustering Algorithm
Graphical modelling by log-linear models (an interface from R to
CoCo)
Interactive and dynamic graphs for the CoCo objects
Correlation Guided Network Integration (CoNI)
Power Calculations for Assessing Correlates of Risk in Clinical
Efficacy Trials
Cosegregation Analysis and Pedigree Simulation
Analysis of R Code for Reproducible Research and Code
Comprehension
Cohen's D_p Computation with Confidence Intervals
Simulation of Cohort Platform Trials for Combination Treatments
Simultaneous Confidence Interval for Multinomial Proportion
Collapses Levels, Computes Information Value and WoE
Distribution and Percentile of Sackin, Cophenetic and
Colless-Like Balance Indices of Phylogenetic Trees
Collocation Inference for Dynamic Systems
Computational Methods for Immune Cell-Type Subsets
Compare phylogenetic or population genetic data alignments
Constructions method of rectangular PBIB and rectangular right
angular PBIB(m) (m= 4,5 and 7) designs.
Construction Methods of some Series of PBIB Designs
Estimation of Optimal Portfolio Weights by Combining Simple
Portfolio Strategies
Network-Based Communities and Kernel Machine Methods
Comparative Phylogeographic Analysis using the Community Tree
Framework
Useful libraries for building a Java based GUI under R
Useful Libraries for Building a Java Based GUI under R
Extract and plot common trends from a cointegration system
Extact common trend(s) from a cointegration system
Extract and plot common trends from a cointegration system.
Calculate P-value for Johansen Statistics.
Statistical Functions for the Design of Studies with Composite
Endpoints
Conway-Maxwell-Poisson GLM and distribution functions
Conway-Maxwell-Poisson GLM and Distribution Functions
Distribution function of quadratic forms in normal variables
Distribution Function of Quadratic Forms in Normal Variables
Composite-likelihood based Analysis of Random Fields
Composite-Likelihood Based Analysis of Random Fields
Interface to Diverse Estimation Methods of Causal Networks
Estimate diagnostic accuracy (sensitivity, specificity, etc) and
agreement statistics when one test is conducted on only a
subsample of specimens
Correct for Verification Bias in Diagnostic Accuracy & Agreement
Comparison of Cumulative Incidence Between Two Groups Under
Competing Risks
Comparison of Survival Curves Between Two Groups
The Semi-Parametric Cumulative Incidence Function
Competing Risk Model with Frailties for Right Censored Survival Data
Numerically Evaluate Integrals and Derivatives (also Higher
Order) of Vector- And Complex-Valued Functions
Create Complex UpSet Plots Using 'ggplot2' Components
This package contains an implementation of continuous convex
piecewise (linear) functions (quadratic coming soon
This package contains an implementation of continuous convex
piecewise (linear and quadratic) functions
Optimisation with Continuous Convex Piecewise (Linear and
Quadratic) Functions
Contingency Measure-Based Networks for Binary Time Series
Computation of Parameters Used in Preliminary Assessment of
Conservation Status
Partial Linear Least-Squares Regression using Constrained
Splines
An Alternative to the Kruskal-Wallis Test Based on the Kendall
Tau Ideas
An Alternative to the Kruskal-Wallis Based on the Kendall Tau
Distance
Estimation and Inference for Conditional Copula Models
Conditional Multivariate t Distribution, Expectation
Maximization Algorithm, and Its Stochastic Variants
Condition Number Regularized Covariance Estimation
Censored Data Imputation for Direct Modeling
Confidence Interval for the Univariate Population Variance
without Normality Assumption
Package to Parse an INI File, Including Variable Interpolation
Sensitivity Analyses for Unmeasured Confounding in Meta-Analyses
Distance metrics for trees generated by Congreve and Lamsdell
(2016)
Distance Metrics for Trees Generated by Congreve and Lamsdell
A package to check the cancellation axioms of conjoint
measurement.
Tools for working with connectivity matrices
Tools for Working with Connectivity Data
Compute the Median Ranking(s) According to the Kemeny's
Axiomatic Approach
Classification and Clustering of Preference Rankings
Fits Regression & ARMA Models Subject to Constraints to the
Coefficient
Predictive Probability for a Continuous Response with an ANOVA
Structure
Model-Based Clustering and Classification with the Multivariate
Contaminated Normal Distribution
Clustering and Classification with the Contaminated Normal
Create Contour Plots from Data or a Function
Estimating IRT Parameters via Machine Learning Algorithms
Important Concepts of Cooperative Game Theory
Automated Cleaning of Occurrence Records from Biological
Collections
Copula-Based Semiparametric Analysis for Time Series Data with
Detection Limits
Copula-Based Sensitivity Analysis for Observational Causal
Inference
Estimation and Statistical Process Control Under Copula-Based
Time Series Models
Copula-Based Estimation and Statistical Process Control for
Serially Correlated Time Series
Copula Markov Model with Dependent Censoring
Association Analysis of Bivariate Survival Data Based on Copulas
Analysis of Bivariate Survival Data Based on Copulas
Copula-Based Regression Models for Bivariate Censored Data
Copula-Based Regression Models for Multivariate Censored Data
Copula Based Bivariate Beta-Binomial Model for Diagnostic Test
Accuracy Studies
Copula Mixed Effect Models for Bivariate Meta-Analysis of
Diagnostic Test Accuracy Studies
Copula Mixed Effect Models for Bivariate and Trivariate
Meta-Analysis of Diagnostic Test Accuracy Studies
Copula Mixed Effect Models for Multivariate Meta-Analysis of
Diagnostic Test Accuracy Studies
Copula Mixed Effects Models for Multivariate Meta-Analysis of
Diagnostic Test Accuracy Studies
Copula Mixed Models for Multivariate Meta-Analysis of Diagnostic
Test Accuracy Studies
Bivariate Copula Based Regression Models
An R Package for Computing Statistical Indices to Detect Answer
Copying on Multiple-Choice Tests
Computing Statistical Indices to Detect Answer Copying on
Multiple-Choice Tests
Computing Response Similarity Indices for Multiple-Choice Tests
Baseline Correction for Copy Number Data from Cancer Samples
Generate High-Dimensional Binary Data with Correlation
Structures
Set-Based Differential Covariance Testing for Genomics
Correct Mass Isotopologue Distribution Vectors
Linear regression based on linear structure between covariates
Linear Regression Based on Linear Structure Between Covariates
Linear Regression Based on Linear Structure Between Variables
Adaptive Shrinkage of Correlation and Covariance Matrices
Adaptive Shrinkage of Correlation Vectors and Matrices
Collection of Rudimentary Bioinformatics Tools
Classes and Functions to Serve as the Basis for Other 'Gx'
Packages
Collection of Scripts for Interface Between 'Cornerstone' and
'R'
Nonparametrics with clustered binary data
Nonparametrics with clustered binary and multinomial data
Nonparametrics with Clustered Binary and Multinomial Data
Estimate Correlations Between Repeatedly Measured Endpoints
(E.g., Reliability) Based on Linear Mixed-Effects Models
Modeling Correlational Magnitude Transformations in
Discretization Contexts
Correct Overloaded Peaks from GC-APCI-MS Data
A collection of functions for graphing correlation matrices
A Collection of Functions for Graphing Correlation Matrices
Photometric redshift estimation using generalized linear models
Estimation and Inference Methods for Counterfactual Analysis
Creating Null and Counternull Distributions to Find Counternull
Values
Flexible Univariate and Bivariate Count Process Probability
Flexible Univariate Count Models Based on Renewal Processes
Mean and variance modeling of count data
Mean and Variance Modeling of Count Data
Combine Partial Covariance / Relationship Matrices
Covariance Regression with Random Forests
Model-Free Covariate Selection in High Dimensions
Statistical Tools for Covariance Analysis
Mutation Analysis Toolkit for COVID-19 (Coronavirus Disease
2019)
Bias-Corrected Sandwich Variance Estimators for Marginal Cox
Analysis of Cluster Randomized Trials
Cox survival models by likelihood based boosting
Cox models by likelihood based boosting for a single survival endpoint or competing risks
Cox models by likelihood based boosting for a single survival
endpoint or competing risks
Variable Selection for Cox's Model with Interval-Censored Data
Cox Regression (Proportional Hazards Model) with Multiple Causes
and Mixed Effects
R-Squared Measure Based on Partial LR Statistic, for the Cox PH
Regression Model
Change Point Detection in Dynamic Graphs
CpG Filtering Method Based on Intra-class Correlation
Coefficients
CpG Filtering Method Based on Intra-Class Correlation
Coefficients
Association between Methylation and a phenotype of interest
Association Between Methylation and a Phenotype of Interest
Calculation of Log2 Counts per Million Cutoff from ERCC Controls
Conditional probability function of a competing event
The Conditional Probability Function of a Competing Event
Univariate Cramer Test on Two Samples of Data
Functions for calculating the CreditMetrics risk model
Evaluation of Credit Risk with Structural and Reduced Form
Models
Access Cropland Data Layer Data via the 'CropScape' Web Service
A Partial Clustering Algorithm with Automatic Estimation of the
Number of Clusters and Identification of Outliers
Cross-Screening in Observational Studies that Test Many
Hypotheses
Verbal Autopsy Data Transformation for InSilicoVA and InterVA5
Algorithms
Verbal Autopsy Data Transform for Use with Various Coding
Algorithms
Classes and Methods for Cross Validation of "Class Prediction"
Algorithms
Analysis and Search of Crossover Designs
Statistical Tests for Cryptographic Randomness
Identifying cryptic relatedness in genetic association studies
Identifying Cryptic Relatedness in Genetic Association Studies
Rule- and Instance-Based Regression Modeling
Rule- And Instance-Based Regression Modeling
Evaluation Metrics for Customer Scoring Models Depending on
Binary Classifiers
Costs Allocation for the Installation of an Elevator
Optimal Equal-HR Method to Find Two Cutpoints for U-Shaped
Relationships in Cox Model
L1-version of Cramer-von Mises Two Sample Tests
Cyclic Coordinate Descent for Logistic, Poisson and Survival
Analysis
Optimal Transport for Gating Transfer in Cytometry Data with
Domain Adaptation
Computes Signaling and Population Stats for Cytometry Data on
Cytobank using 'CytobankAPI'
Bridging and Extending the CytobankAPI Package in R to the
Cytobank Web Application
Predicting Causal Direction from Dependency Features
Plotting D3 Hierarchical Plots in R and Shiny
Interactive Charts of Nested and Hierarchical Data with 'D3.js'
Discriminant Analysis for Evolutionary Inference
Dimensionality Assessment using Minimum Rank Factor Analysis
Data Analysis And Graphics data and functions
Data Analysis and Graphics Data and Functions
Data Sets and Functions, for demonstrations with expression arrays.
Data Sets and Functions, for demonstrations with expression
arrays and gene sequences
Data Sets and Functions, for Demonstrations with Expression
Arrays and Gene Sequences
Data Sets and Functions, Additional to DAAG
Data Sets and Functions, supplementary to DAAG
Calculating Data Agreement Criterion Scores to Rank Experts
Based on Their Beliefs
Data Analysis with Ceiling and/or Floor Data
Dynamical Assembly of Islands by Speciation, Immigration and
Extinction
moDel Agnostic Language for Exploration and eXplanation
DALY Calculator - A GUI for stochastic DALY calculation in R
The DALY Calculator - Graphical User Interface for Probabilistic
DALY Calculation in R
Dynamic Assembly Model Of Colonization, Local Extinction and
Speciation
Dynamic Assembly Model of Colonization, Local Extinction and
Speciation
Denoising Algorithm based on Relevance network Topology
The Research Data Warehouse of Miguel de Carvalho
Deconvolution Analysis Tool for Dynamic Contrast Enhanced MRI
Differential Analysis with Random Reference Genes
Detecting Breakpoints and Estimating Segments in Trend (DBEST)
Detecting Breakpoints and Estimating Segments in Trend
DBF test of no difference between groups
methods of distance-based gene set functional enrichment
analysis
methods of distance-based gene set functional enrichment
analysis.
Sequence Clustering with Discrete-Output HMMs
Discrete Beta Kernel Graduation of mortality data
Discrete Beta Kernel Graduation of Mortality Data
Rank Selection for Non-Negative Matrix Factorization
A Double Bootstrap Method for Analyzing Linear Models with
Autoregressive Errors
Finite Sample Power Calculations for Detection Boundary Tests
Dynamic Correlation Analysis for High Dimensional Data
Detrended Fluctuation and Detrended Cross-Correlation Analysis
Differential Community Detection in Paired Biological Networks
Clustering for Multivariate and Univariate Data Using
Expectation Maximization Algorithm
Clustering Big Data using Expectation Maximization Star (EM*)
Algorithm
Create, Survey and Analyse Discrete Choice Experiments
Efficient and Accessible Discrete Choice Experiments
Data Cloud Geometry (DCG): Using Random Walks to Find Community
Structure in Social Network Analysis
Differential Coexpression Analysis of Gene Expression Microarray
Data
Differential Co-expression Analysis and Differential Regulation
Analysis of Gene Expression Microarray Data
Differential CoExpression Analysis and Differential Regulation
Analysis of Gene Expression Microarray Data
Claims Reserving under the Double Chain Ladder Model
Distance Based Cell Lineage Reconstruction
List Linear n-Peptide Constraints for Overlapping Protein
Regions
Nonparametric Regression and Bandwidth Selection for Spatial
Models
Analyzing Dichotomous Choice Contingent Valuation Data
Functions for the detection of spatial clusters of diseases
Functions for the Detection of Spatial Clusters of Diseases
Model-Based Detection of Disease Clusters
Variance Stabilization by Data-Driven Haar-Fisz (for Microarrays)
Variance Stabilization by Data-Driven Haar-Fisz (for
Microarrays)
Disease-Related Differential Proteins and Co-Expression Network
Analysis
Disease-Drived Differential Proteins Co-Expression Network
Analysis
Distance & Density-Based Outlier Detection
DEComposition of Indirect and Direct Effects
Dirichlet-multinomial Evolutionary Event Profile Randomization
(DEEPR) test
Density Estimation for Extreme Value Distribution
Density Estimation by Extreme Value Distributions
Inferring Differentially Expressed Genes using Generalized
Linear Mixed Models
Density Estimation by Life Time Distributions
Kernel Density Estimation using Lifetime Distributions
The Distributed EM Algorithms in Multivariate Gaussian Mixture
Models
Evaluating the genetic differentiation between populations based
on Gst and D values.
Calculation of Gst and D values characterizing the genetic
differentiation between populations.
DEvelopment (of Multi-Linear QSPR/QSAR) MOdels VAlidated using
Test Set
Read, Plot and Analyse Output from the DEPONS Model
Estimation of Diagonal Elements of Sparse Precision-Matrices
Bagging with Distance-based Regression for Differential Gene
Expression Analyses
Representation of DET Curve with Confidence Intervals
A Differential Expression Analysis Toolkit for Visual Analytics
and Data Aggregation
Global optimization by differential evolution
Global optimization by Differential Evolution
Global Optimization by Differential Evolution
Differential Evolution Optimization in pure R
Differential Evolution Optimization in Pure R
Deconvolute Mixed Genomes with Unknown Proportions
Linear Discriminant Function and Canonical Correlation Analysis
Differential Functioning of Items and Tests (DFIT) framework
analyses.
Differential Functioning of Items and Tests
Differential Gene Expression (DGE) Analysis Results Data Object
Differential Gene Expression (DGE) Analysis Utility Toolkit
Double Generalized Linear Models Extending Poisson Regression
Residual Diagnostics for Hierarchical (Multi-Level / Mixed)
Regression Models
Import medical imaging data using the DICOM Standard
Estimation in DID with Multiple Groups and Periods
Detection of Differential Item Functioning (DIF) in Rasch Models
by Boosting Techniques
A penalty approach to Differential Item Functioning in Rasch
Models
A Penalty Approach to Differential Item Functioning in Rasch
Models
Multilevel Mantel-Haenszel Statistics for Differential Item
Functioning Detection
Differential Item Functioning via Shiny Application
Item Focused Trees for the Identification of Items in
Differential Item Functioning
Item Focussed Trees for the Identification of Items in
Differential Item Functioning
Determination of Intervals Using Georeferenced Survey Simulation
DIME (Differential Identification using Mixture Ensemble)
Differential Identification using Mixture Ensemble
Bayesian Clustering of Multivariate Data Under the
Dirichlet-Process Prior
Four Essential Functions for Statistical Distributions Analysis:
A New Functional Approach
Lightweight Utilities for 'DIZ' R Package Development
Utilities for 'DIZ' R Package Development
Finding Patterns of Monotonicity and Convexity in Data
A User-Friendly Pipeline for Biomarker Discovery in Single-Cell
Transcriptomics
Distance Measure Based Judgment and Learning
Implementation of Differentiable Lasso Penalty in Linear Models
Implementation of Adaptive or Non-Adaptive Differentiable Lasso
and SCAD Penalties in Linear Models
Diffusion Model of Conflict (DMC) in Reaction Time Tasks
Daily Based Morgan--Morgan--Finney (DMMF) Soil Erosion Model
Daily Based Morgan-Morgan-Finney (DMMF) Soil Erosion Model
Delete or Merge Regressors for linear model selection.
DMR Detection by Non-Homogeneous Hidden Markov Model from
Methylation Array Data
Delete or Merge Regressors Algorithms for Linear and Logistic
Model Selection and High-Dimensional Data
Tools for Applying Distribution Mapping Based Transfer Learning
Functions and data for "Data Mining with R"
Functions and Data for the Second Edition of "Data Mining with
R"
Tools for analysing forensic genetic DNA data
Tools for Analysing Forensic Genetic DNA Data
Differential Network Local Consistency Analysis
Estimating Differential Networks under Semiparametric Gaussian
Graphical Models
Analysis of Discretely Observed linear
Birth-And-Death(-and-immigration) Markov Chains
Analysis of Discretely Observed Linear
Birth-and-Death(-and-Immigration) Markov Chains
The Distributed Online Expectation Maximization Algorithms to
Solve Parameters of Poisson Mixture Models
Design of Observational Studies, Companion to the Second Edition
Computation of functional similarities between DO terms and gene
products; DO enrichment analysis;Disease Ontology annotation
Disease Analysis toolkit for gene set; Computation of
similarities between DO terms and disease similarity between
gene products; DO enrichment analysis; Disease Ontology
annotation
Disease Analysis toolkit for gene set; Computation of
similarities between DO terms and disease similarity between
gene products; Module detection among the gene set and
multilayer annotation for each module.
Local Linear Hazard Estimation with Do-Validated and
Cross-Validated Bandwidths
Kernel Hazard Estimation with Best One-Sided and Double
One-Sided Cross-Validation
Sparse covariance estimation in heterogeneous samples
Dirichlet Process Mixtures (DPM) and related models using
Gaussian Graphical Models (GGM) for Sparse covariance
estimation in heterogeneous samples
Inference of Parameters of Normal Distributions from a Mixture
of Normals
Density, Probability, Quantile ('DPQ') Computations
DPQ (Density, Probability, Quantile) Distribution Computations
using MPFR
Dirichlet Process Weibull Mixture Model for Survival Data
Differentially Private Statistical Analysis and Machine Learning
Semiparametric Bayesian Analysis using Dirichlet process priors
Semiparametric Bayesian Analysis using Dirichlet process priors and Extensions
Bayesian Nonparametric and Semiparametric Analysis
Semiparametric Bayesian procedure for selecting a subset
containing the weakest species with an acceptably high
probability.
Semi- and nonparametric Bayesian Subset Selection Procedures
Graphical User Interface for Data Quality Assessment
Core Functions for Data Quality Assessment
Joint Dimension Reduction and Spatial Clustering
Disease Rapid Analysis and Forecasting Tool
Computation of Rayleigh Densities of Arbitrary Dimension
A Nonparametric Doubly Robust Test for Continuous Treatment
Effect
Regularized Estimation of Dynamic Linear Regression in the
Presence of Autocorrelated Residuals (DREGAR)
Differential Risk Hotspots in a Linear Network
Discontinuous Regression and Image Processing
Drug Repurposing in Cancer via a Subpathway Crosstalk Network
Dynamical Systems Approach to Infectious Disease Epidemiology
Dynamical Systems Approach to Infectious Disease Epidemiology
(Ecology/Evolution)
Dynamical Systems Approach to Immune Response Modeling
Bayesian subgroup analysis in clinical trials
'DataSHIELD' Implementation on Local Datasets
'DataSHIELD' Client for 'MOLGENIS Armadillo'
A Comprehensive R Interface for the DSSAT Cropping Systems Model
Implementation of the Direct Sampling Spatial Prior
What Skills and Qualifications are Required for Data Science
Related Jobs?
Spatial modelling for distance sampling data
Spatial Modelling for Distance Sampling Data
Recursive Partitioning for Discrete-Time Survival Trees
Exploring Disease Similarity in Terms of Dysfunctional
Regulatory Mechanisms
A Wrapper of the JavaScript Library 'DataTables'
Diagnostic Test Assessment in the Absence of Gold Standard
Creates Plots Accompanying Bayesian Diagnostic Test Accuracy
Meta-Analyses
Comparison of Binary Diagnostic Tests in a Paired Study Design
Doubly Truncated Data Analysis, Cumulative Incidence Functions
Doubly Truncated Data Analysis, Non Iterative
Dunnett-Tukey-Kramer: Pairwise Multiple Comparison Test Adjusted for Unequal Variances and Unequal Sample Sizes
Dunnett-Tukey-Kramer Pairwise Multiple Comparison Test Adjusted for Unequal Variances and Unequal Sample Sizes
Dunnett-Tukey-Kramer Pairwise Multiple Comparison Test Adjusted
for Unequal Variances and Unequal Sample Sizes
Suite of functions related to discrete-time discrete-state
Markov Chains
Suite of Functions Related to Discrete-Time Discrete-State
Markov Chains
Estimation and comparison of dynamic treatment regimes
Estimation and Comparison of Dynamic Treatment Regimes
Learning Algorithms for Dynamic Treatment Regimes
Statistical Learning Methods for Optimizing Dynamic Treatment
Regimes
DTR Estimation and Inference via G-Estimation, Dynamic WOLS, and
Q-Learning
DTR Estimation and Inference via G-Estimation, Dynamic WOLS,
Q-Learning, and Dynamic Weighted Survival Modeling (DWSurv)
A Class for Working with Time Series Based on 'data.table' and
'R6' with Largely Optional Reference Semantics
A Class for Working with Time Series Data Based on 'data.table'
and 'R6' with Largely Optional Reference Semantics
Imputation of Time Series Based on Dynamic Time Warping
Imputation of Multivariate Time Series Based on Dynamic Time
Warping
Simplified Data Analysis with Wrapper Functions for the
'Data.Table' Package
Correlation-Based Feature Selection for Single-Cell RNA
Sequencing Data
Analyze Dose-Volume Histograms and Check Constraints
Dynamic Water Balance a Hydrological Model
DWD implementation based on A IPM SOCP solver
Fast Algorithms for Large Scale Generalized Distance Weighted
Discrimination
Gene Expression Deconvolution Using Dampened Weighted Least
Squares
Parametric Regression for Discrete Response
Estimation and Prediction of Skewed Spatial Processes
Diagnostic accuracy of classification models.
Dandelion Plot for R-mode Exploratory Factor Analysis
Dandelion Plot for R-Mode Exploratory Factor Analysis
Functions for Wayne W. Daniel's Biostatistics, Tenth Edition
Estimating Dark Diversity and Site-Specific Species Pools
Tools for Reading, Processing and Writing 'DSSAT' Files
file-based access to large matrices stored on HDD in binary
format
File-Based Access to Large Matrices Stored on HDD in Binary
Format
Functional Data Analysis with Linear Differential Equations
R tools for making it easier to combine and clean data sets.
Tools for Easily Combining and Cleaning Data Sets
An Interactive Editor for Viewing, Entering & Editing Data
An Interactive Editor for Viewing, Entering, Filtering & Editing
Data
Make it Easier to Enter Questionnaire Data
Generate Fake Data for Relational Databases
Constrained data frames and homogenous list classes
Export Data from R so DataGraph can Read it
Export Data from R so 'DataGraph' can Read it
Construct Reproducible Analytic Data Sets as R Packages
Data Visualisation Using an HTML Page and 'D3.js'
Connecting to Various Database Platforms
JAR Dependencies for the 'DatabaseConnector' Package
Swarm Intelligence for Self-Organized Clustering
Tools to Complete Euclidean Distance Matrices
Provides a Link Between the 'Refinitiv Datastream' System and R
Detecting Changes in Autocorrelated and Fluctuating Signals
Estimates Pseudotimes for Single Cell Expression Data
Implementation of Multi Objective Decision Analysis
Empirical Mode Decomposition for Cyclostratigraphy
Additional dialogs and functions for Deducer
A Deducer plugin for moderated multiple regressions and simple
slopes analysis
Statistical functions for the Delaporte distribution
Statistical Functions for the Delaporte Distribution
Sample Size and Power Calculations using the APPLE and SEPPLE
Methods
Delta Measurement of Agreement for Nominal Data
Functions to calculate relatedness on diploid genetic data
Functions to Calculate Relatedness on Diploid Genetic Data
Extrapolate Gender, Age and Nationality of a Name
Dendrogram seriation: ordering for visualisation
Dendrogram Seriation: Ordering for Visualisation
A Set of Tools for Calculating Spatial Synchrony Between
Tree-Ring Chronologies
Parameter Estimates and Real-Time Prediction of a Single Dengue
Outbreak
Dens-Based Method for Partial Correlation Estimation in Large
Scale Brain Networks
Density.T.HoldOut: Non-combinatorial T-estimation Hold-Out for
density estimation
Statistical Depth Functions for Multivariate Analysis
Some Functions to be Used as Shortcuts in 'RStudio'
Some Functions to be Used as Shortcuts in RStudio
Interactive Functions to be Used as Shortcuts in 'RStudio'
Publication Quality Descriptive Statistics Tables
R interface to DescribeDisplay (GGobi plugin)
An Interface to the DescribeDisplay GGobi Plugin
An Interface to the 'DescribeDisplay' 'GGobi' Plugin
Design Clinical Trials with Potential Biomarker Effect
Design Patterns in R to build reusable object-oriented software
Life Insurance Premium and Reserves Valuation
DetMCD Algorithm (Robust and Deterministic Estimation of
Location and Scatter)
Implementation of the DetMCD Algorithm (Robust and Deterministic
Estimation of Location and Scatter)
Suite of Deterministic and Robust Algorithms for Linear
Regression
A computer program to detect markers responding to selection
A Computer Program to Detect Markers Responding to Selection
Develop Treatment Rules with Observational Data
Data sets from Devore's "Prob and Stat for Eng (5th ed)"
Data sets from Devore's "Prob and Stat for Eng (6th ed)"
Data sets from Devore's "Prob and Stat for Eng (7th ed)"
Finding Recurrent DNA Copy Number Alterations and Differences
Differential Pattern Analysis via Linear Modeling
Robust Tests for Differential Dispersion and Differential
Expression in RNA-Sequencing Data
Directional Penalties for Optimal Matching in Observational
Studies
Fitting Sample Selection Models for Discrete Response Variables
Diagnostic test summary measures for three ordinal groups
Diagonositic test accuracy evaluation for medical professionals
Diagnostic test accuracy evaluation for medical professionals
Diagnostic test accuracy evaluation for medical professionals.
Create Graph Diagrams and Flowcharts Using R
Export DiagrammeR Graphviz Graphs as SVG
Construction and evaluation of metamodels
Construction and Evaluation of Metamodels
Kriging methods for computer experiments
Kriging Methods for Computer Experiments
Kriging-based optimization for computer experiments
Kriging-Based Optimization for Computer Experiments
Plot methods for computer experiments design and models.
Plot methods for computer experiments design and surrogate.
Plot Methods for Computer Experiments Design and Surrogate
Methods for Visualization of Computer Experiments Design and
Surrogate
R6 Based Key-Value Dictionary Implementation
A Simple Implementation and Demonstration of Gradient Boosting
R companion to "Curve and Surface Fitting with Splines"
Difference of Two Precision Matrices Estimation
Analyzing and Visualizing Differential Correlation Networks in
Biological Data
Detection of Statistically Significant Changes in Complex
Biological Networks
Distributional Differences Across Contingency Tables
Pattern Heterogeneity via Distributional Differences Across
Contingency Tables
Pattern Analysis Across Contingency Tables
Inference and Analysis for Generalized Quadratic Diffusions
Inference and Analysis for Diffusion Processes via Data
Imputation and Method of Lines
Inference and Analysis for Jump Generalized Quadratic Diffusions
An application programming interface for generating null models
of social contacts based on individuals' space use
Nonparametric Methods for Directional Data
Linear Regressions with a Latent Outcome Variable
Estimating Controlled Direct Effects for Explaining Causal
Findings
Adjusted Means and Proportions by Direct Standardisation
A Collection of R Functions for Directional Data Analysis
A Collection of Functions for Directional Data Analysis
Estimate the Gene Expression Levels and Component Proportions of
the Normal, Stroma (Immune) and Tumor Components of Bulk Tumor
Samples
Calculates Disproportionate Impact When Binary Success Data are
Disaggregated by Subgroups
DiscML: An R package for estimating evolutionary rates of
discrete characters using maximum likelihood
Multiple Testing Procedures with Adaptation for Discrete Tests
Improved q-Values for Discrete Uniform and Homogeneous Tests
Discrete Weibull Distributions (Type 1 and 3)
Tools of the Trade for Discriminant Analysis
Calculate Dissimilarity Matrix for Dataset with Mixed Attributes
A Graphical User Interface for Plotting Common Univariate
Distributions
A simple way to fit detection functions to distance sampling
data and calculate abundance/density for biological
populations.
Distance Sampling Detection Function and Abundance Estimation
DiSTATIS Three Way Metric Multidimensional Scaling
Powerful Goodness-of-Fit Tests Based on the Likelihood Ratio
Diversity Melting Assay Analysis package
Econometric Tools to Measure Portfolio Diversification
Building Diversity Models from Multiple Species Occupancy Models
Functions for re-sampling a community matrix to compute
Shannon's Diversity index at different sampling levels.
Functions for re-sampling a community matrix to compute
diversity indices at different sampling levels.
Creation of Arrays by Mixed Integer Programming
Full factorials, orthogonal arrays and base utilities for DoE
packages
Full Factorials, Orthogonal Arrays and Base Utilities for DoE
Packages
Wrapper Package for Design of Experiments Functionality
Wrapper package for design of experiments functionality
Rare Variant Association Test Based on Position Density
Estimation
Using the Docker Container to Create R Workers on Local or Cloud
Platform
Provides functions for Acceptance Sampling: Ideas originated by
H Dodge
Provides functions for Acceptance Sampling: Ideas originated by
H.F. Dodge
Functions for Acceptance Sampling Ideas originated by H.F. Dodge
Acceptance Sampling Ideas Originated by H.F. Dodge
ADI (average dominance index) and social network graphs with
dual directions
ADI (average dominance index), social network graphs with dual
directions, and music notation graph
ADI (Average Dominance Index), Social Network Graphs with Dual
Directions, and Music Notation Graph
A Package to Calculate and Visualize Dominance Hierarchies
Calculate and Visualize Dominance Hierarchies
Function to construct D-optimal experimental designs
Planning and Analyzing Dose Finding experiments
Planning and Analyzing Dose Finding Experiments
Test against parametric regression function
Test Against Parametric Regression Function
Differential Exon Usage Test for RNA-Seq data via Empirical
Bayes Shrinkage of the Dispersion Parameter
Differential Exon Usage Test for RNA-Seq Data via Empirical
Bayes Shrinkage of the Dispersion Parameter
Functions Ported from 'MMR2' Toolbox Offered in Kevin Dowd's
Book Measuring Market Risk
Data Representation: Bayesian Approach That's Sparse
Drug Response Prediction from Differential Multi-Omics Networks
Imputing Dropout Events in Single-Cell RNA-Sequencing Data
Drug Repurposing: Integration and Systematic Investigation of
Genomic High Throughput Data
Calculates the Test-Statistic for the Drift Burst Hypothesis
Implementation of a Machine Learning Framework for Predicting
Drugs Side Effects
Predict Drug Functional Similarity to Drug Repurposing
Analyze Two Choice Reaction Time Data with the D*M Method
Software implementation of step-down and step-up Dunnett test
procedures
Quadratic Programming using Cyclic Projections
non-parametric denoising and clustering method of noisy images
both indexed by time and space
Denoising and clustering for dynamical image sequence (2D or
3D)+T
Denoising and Clustering for Dynamical Image Sequence (2D or
3D)+t
Dynamic Network Communities Detection and Generation
Random Forest with Multivariate Longitudinal Predictors
A Dynamic Nomogram for Linear and Generalized Linear Models as
Shiny Applications
Dynamic Nomograms for Linear, Generalized Linear and
Proportional Hazard Models
Visualising Statistical Models using Dynamic Nomograms
Methods for Estimating Dynamic Treatment Regimes
Methods for Estimating Optimal Dynamic Treatment Regimes
Dynamically visualized probability distributions and their
moments
Local Gaussian Process Model for Large-Scale Dynamic Computer
Experiments
Modelling and Analysis of Dynamic Computer Experiments
A Seamless Integration of 'R' and 'Dynare'
Background and Pathway Data Used in 'DysPIA'
Management and Processing Tools for Data Produced by the
Empatica E4
Exponentially Weighted Moving Average with Adjustments to
Measurement Error
Simulation Based Inference of Lasso Estimator
Estimator Augmentation and Simulation-Based Inference
Sample Size Calculation Method for Cost-Effectiveness Studies
Based on Expected Value of Perfect Information
An Empirical Bayes Method for Chi-Squared Data
Estimate Ensemble Bayesian Model Averaging Forecasts using Gibbs
Sampling or EM-Algorithms
Derive Polygenic Risk Score Based on Emprical Bayes Theory
Empirical Bayesian Lasso (EBlasso) and Elastic Net (EBEN)
Methods for Generalized Linear Models
Empirical Bayesian Lasso and Elastic Net Methods for Generalized
Linear Models
Equal Covariance Functions Testing by L2-Norm and Sup-Norm
A Goodness-of-Fit Test for Elliptical Distributions with
Diagnostic Capabilities
Ensemble Correlation-Based Low-Rank Matrix Completion
Download and Extract Data from US EPA's ECOTOX Database
The 'ECS Fargate' Cloud Provider for the 'DockerParallel'
Package
Cointegration Based Timedelay Neural Network Model
Simulation from Endpoint-Conditioned Continuous Time Markov
Chains
Embedding Charts Generated with ECharts Library into Shiny
Applications
Embedding Interactive Charts Generated with ECharts Library into
Shiny Applications
Complexity Measures for Classification Problems
Complexity Measures for Supervised Problems
Goodness of Fit Based on Empirical Distribution Function
Software for network reconstruction and changepoint detection.
Network Reconstruction and Changepoint Detection
An API Client for the Environmental Data Initiative Repository
Dependence Measures via Energy Statistics
Implements the EDNE-Test for Equivalence
Empirical Distribution Ordering Inference Framework (EDOIF)
Estimation of the effective dimension reduction (EDR) space
Estimation of the Effective Dimension Reduction ('EDR') Space
A R Package For Gene Enrichment Disequilibrium Analysis
Read and Analyze Fluorescence Excitation-Emission Matrix (EEM)
Data
Read and Preprocess Fluorescence Excitation-Emission Matrix
(EEM) Data
Ensemble Empirical Mode Decomposition and Its Variant Based
Support Vector Regression Model
Ensemble Empirical Mode Decomposition and Its Variant Based ELM
Model
EEMD Based LSTM Model for Time Series Forecasting
Eigenvectors from Eigenvalues Sparse Principal Component
Analysis (EESPCA)
Dimensionality Assessment Using Minimum Rank Factor Analysis
Exploratory Factor Analysis Functions for Assessing
Dimensionality
Fast and Flexible Implementations of Exploratory Factor Analysis
Tools
Utility Functions for Exploratory Factor Analysis
Wavelet-Based Enhanced FDR for Signal Detection in Noisy Images
Wavelet-Based Enhanced FDR for Detecting Signals from Complete
or Incomplete Spatially Aggregated Data
Exploratory Graph Analysis: A Framework for Estimating the
Number of Dimensions in Multivariate Data Using Network
Psychometrics
Exploratory Graph Analysis - A Framework for Estimating the
Number of Dimensions in Multivariate Data Using Network
Psychometrics
Exploratory Graph Analysis – a Framework for Estimating the
Number of Dimensions in Multivariate Data using Network
Psychometrics
Exploration and Graphics for RivEr Trends (EGRET)
Exploration and Graphics for RivEr Trends
Exploration and Graphics for RivEr Trends (EGRET) Confidence
Intervals
Exploration and Graphics for RivEr Trends Confidence Intervals
Ensemble Gene Regulatory Network Inference
Electronic Health Record (EHR) Data Processing and Analysis Tool
Delineating Reference Changes in Electronic Health Records over
Time
Delineating Temporal Dataset Shifts in Electronic Health Records
R Wrapper for the Energy Information Administration (EIA) API
MCMC Procedures for Estimating Enzyme Kinetics Constants
Empirical Likelihood (EL) for Comparing Two Survival Functions
The Empirical Likelihood-Based Consistent Information Criterion
ELISA Data Analysis with Batch Correction
Implementation of the Efficient Large-Scale Online Display
Advertising Algorithm
Extreme Learning Machine for Survival Analysis
ELT - A package to build Experience Life Tables
Empirical Likelihood Analysis for the Cox Model and
Yang-Prentice (2005) Model
EM Algorithm for Maximum Likelihood Estimation by Non-Precise
Information
Data Management Tools for Real-Time Monitoring/Ecological
Momentary Assessment Data
Evolutionary Monte Carlo (EMC) algorithm
Evolutionary Monte Carlo (EMC) methods for clustering
Evolutionary Monte Carlo (EMC) Methods for Clustering
EM Algorithm for Model-Based Clustering of Finite Mixture
Gaussian Distribution
Empirical Mode Decomposition and Hilbert Spectral Analysis
Earth Mover's Distance for Differential Analysis of Genomics
Data
EM-Algorithm for Jump Diffusion processes
Read and Write Ecological Metadata Language Files
Computationally Efficient Maximum Likelihood Identification of
Linear Dynamical Systems
End-member modelling algorithm and supporting functions for
grain-size analysis
Semi-Supervised Learning via Gaussian Mixture Model
Semi-Supervised Gaussian Mixture Model with a Missing-Data
Mechanism
Contrasts in mixed effects for EMMIX model with random effects.
Contrasts in Mixed Effects for EMMIX Model with Random Effects 2
A Mixture Model-Based Approach to the Clustering of Microarray
Expression Data
Mixture Models with Component-Wise Factor Analyzers
The EM Algorithm and Skew Mixture Distribution
Fitting Unrestricted Multivariate Skew t Mixture Models
A Maximum Likelihood Approach to the Analysis of Modularity
Fitting mixed models with known covariance structures.
Fitting Mixed Models with Known Covariance Structures
EMP: Expected Maximum Profit for Credit Scoring.
Expected Maximum Profit for Credit Scoring.
Estimates EMP following Verbraken et al. (2014)
Expected Maximum Profit Classification Performance Measure
EM Algorithm for Bayesian Shrinkage Approach with Structural
Information Incorporated
Some EM-Type Estimation Methods for the Heckman Selection Model
Exact Multinomial Test: Goodness-of-Fit Test for Discrete
Multivariate data
Exact Multinomial Test: Goodness-of-Fit Test for Discrete
Multivariate Data
Estimation of Missing Values for a Data Matrix
Entropy Minimization over Variable Clusters (EMVC)
Entropy Minimization over Variable Clusters
The Expectation-Maximization Approach to Bayesian Variable
Selection
Conducting the Peak Fitting Based on the EM Algorithm
Analysis of Niche Evolution using Niche and Distribution Models
Automated runs and evaluations of ecological niche models
Automated Runs and Evaluations of Ecological Niche Models
Automated Tuning and Evaluations of Ecological Niche Models
Gaussian Approximation of Bayesian Binary Regression Models
Implementation of the Everglades Phosphorus Gradient Model
Ensemble Patch Transform, Visualization and Decomposition
Testing for Equivalence and Noninferiority
Significance analysis of Event-Related Potentials data
Significance Analysis of Event-Related Potentials Data
ESEA: Discovering the Dysregulated Pathways based on Edge Set
Enrichment Analysis
Toolkit for the simulation of financial assets and interest
rates models.
Ensemble of Subset of K-Nearest Neighbours Classifiers for
Classification and Class Membership Probability Estimation
Power Analysis and Sample Size Calculation
Efficient Sequential Testing with Evidence Ratios
Experiment-Selector CV-TMLE for Integration of Observational and
RCT Data
Modeling earthquake data using Epidemic Type Aftershock Sequence
model
Modeling Earthquake Data Using ETAS Model
Modeling Earthquake Data Using 'ETAS' Model
Tests and simultaneous confidence intervals for equivalence to control
Extra utility functions to execute standard ETL operations on
large data
Utility functions to execute standard ETL operations (using
package ff) on large data.
Utility Functions to Execute Standard Extract/Transform/Load
Operations (using Package 'ff') on Large Data
Estimation of Variance by Efficient Replication
Epidemic Volatility Index as an Early-Warning Tool
Sensitivity Analyses for Unmeasured Confounding in Observational
Studies and Meta-Analyses
Sensitivity Analyses for Unmeasured Confounding or Selection
Bias in Observational Studies and Meta-Analyses
Sensitivity Analyses for Unmeasured Confounding and Other Biases
in Observational Studies and Meta-Analyses
Goodness-of-fit tests for the Exponential and two-parameter
Weibull distributions
Goodness-of-Fit Tests for the Exponential and Two-Parameter
Weibull Distributions
Escalation with Overdose Control using 2 Drug Combinations
Tunes AdaBoost, Support Vector Machines, and Gradient Boosting
Machines
Tunes AdaBoost, Elastic Net, Support Vector Machines, and
Gradient Boosting Machines
Multiple Locus Association Mapping on a Genome-Wide Scale
Simulating Explicit Population Genetics Models
EasyABC: performing efficient approximate Bayesian computation
sampling schemes
Efficient Approximate Bayesian Computation Sampling Schemes
A Convenient Way of Descriptive Statistics
Utility functions for working with mark-recapture data.
Easy Model-Builder Functions for 'OpenMx'
Evaluation of stratified genome-wide association meta-analysis
results
Empirical Bayes thresholding and related methods
Empirical Bayes Thresholding and Related Methods
Estimating a Diet Matrix from Biotracer and Stomach Content Data
A General Framework for Combining Ecosystem Models
Analysis of Phenotypic, Genotypic and Environmental Data
Spatial Analysis of Phenotypic, Genotypic and Environmental Data
Management and Exploratory Analysis of Spatial Data in Landscape
Genetics
Principle equations used in Eco-Hydrology.
A community modeling foundation for Eco-Hydrology.
A Community Modeling Foundation for Eco-Hydrology
Simulate and Sample from Ecological Interaction Networks
An Implementation of the EcoTroph Ecosystem Modelling Approach
General Analysis of Various Economics Demand Systems
Characterising and Locating Ecotones and Communities
Equality of 2 (or k) Continuous Univariate and Multivariate
Distributions
Analysis of NCES Education Survey and Assessment Data
Simultaneous Edit-Imputation for Continuous Microdata
Visualization of Categorical Response Models
Estimation of the Effective Dose including Bootstrap confidence intervals
Estimation of the Effective Dose including Bootstrap confidence
intervals
Test changes of a grouped response relative to baseline.
Efficient Initials for Computing the Maximal Eigenpair
Simple Presentation of Estimated Exponential Semi-Variograms
Replicar metodologia de SPE/MF para calculo de elasticidade de
receita
Statistics Methods for Applying in LATAM Elections
Enhanced routines for plotting and analyzing valued relational
data.
Data sets, functions and examples from the book:
"The Elements of Statistical Learning, Data Mining,
Inference, and Prediction" by Trevor Hastie,
Robert Tibshirani and Jerome Friedman.
Data sets, functions and examples from the book: "The Elements
of Statistical Learning, Data Mining, Inference, and
Prediction" by Trevor Hastie, Robert Tibshirani and Jerome
Friedman.
Data Sets, Functions and Examples from the Book: "The Elements
of Statistical Learning, Data Mining, Inference, and
Prediction" by Trevor Hastie, Robert Tibshirani and Jerome
Friedman
Inference of Elliptical Distributions and Copulas
Preference Rating for Visual Stimuli Based on Elo Ratings
Optimized Elo Rating Method for Obtaining Dominance Ranks
Animal Dominance Hierarchies by Elo Rating
Bayesian Dominance Hierarchy Steepness via Elo Rating and
David's Scores
Fast Embedding Guided by Self-Organizing Map
Computation and Visualization of Empirical Joint Distribution
(Empirical Joint CDF)
Emissions and Statistics in R for Wastewater and Pollutants in
Combined Sewer Systems
Estimation of Wastewater Emissions in Combined Sewer Systems
Tools for Create Emissions for Air Quality Models
Routines for Performing Empirical Calibration of Observational
Study Estimates
Encoding of Nucleotide Sequences into Numeric Feature Vectors
Distribution Free Multivariate Control Chart Based on Energy
Test
Data sets from "Introductory Statistics for Engineering
Experimentation"
Enrichment Analysis and Intersecting Sankey Diagram
Extensible Package for Parallel, Batch Training of Base Learners
for Ensemble Modeling
Extensible Package for Cross-Validation-Based Integration of
Base Learners
Extensible Package for Principal-Component-Regression-based
Integration of Base Learners
Extensible Package for Principal-Component-Regression-Based
Integration of Base Learners
Extensible Package for Principal-Component-Regression-Based
Heterogeneous Ensemble Meta-Learning
Extensible Classes and Methods for Penalized-Regression-based
Integration of Base Learners
Extensible Classes and Methods for Penalized-Regression-Based
Integration of Base Learners
Tools for the estimation of entropy and related quantities.
Estimation of Entropy and Related Quantities
Tools for Exploring Differential Shannon Entropy, Differential
Coefficient of Variation and Differential Expression
MCMC Simulation and Convergence Evaluation using Entropy and
Kullback-Leibler Divergence Estimation
Detection of Structural Changes in Climate and Environment Time
Series
Environmental Exposure on the Individual Level
Whole Genome Phylogenies Using Sequence Environments
Package for Environmental Statistics, including US EPA Guidance
Package for Environmental Statistics, Including US EPA Guidance
Environmental Probabilistic Risk Assessment Tools
Statistical analysis of environmental space-time processes
Statistical Analysis of Environmental Space-Time Processes
A package for statistical analysis in epidemiology.
A Package for Statistical Analysis in Epidemiology
Implements Hierarchical Bayesian Models for Epidemiological
Applications
Epidemiological Tool for Contact Tracing
Epidemiological tool for contact tracing.
Epidemiological tool for contact tracing
EpiEstim: a package to estimate time varying reproduction
numbers from epidemic curves.
Estimate Time Varying Reproduction Numbers from Epidemic Curves
Spatial and Network Based Individual Level Models for Epidemics
Continuous Time Distance-Based and Network-Based Individual
Level Models for Epidemics
Estimation of Time Varying Reproduction Numbers and Restored
Incidence Curves Using Variational Techniques
Incidence Curve Decomposition by Inverting the Renewal Equation
A Bayesian Tool for Near Real-Time Estimation of the
Reproduction Number
A Bayesian Tool for Approximate Real-Time Estimation of the
Reproduction Number
A Bayesian Tool for Fast and Flexible Estimation of the
Reproduction Number
Mathematical Modeling of Infectious Disease
Mathematical Modeling of Infectious Disease Dynamics
Estimate Real-Time Case Counts and Time-Varying Epidemiological
Parameters
Latent Residuals Test for Epidemiology and Ecology Models
Ensemble Based Machine Learning Approach for Predicting
Methylation States
Conversion Between Epidemiological Weeks and Calendar Dates
Constructing an Epistemic Model for the Games with Two Players
Testing the Equality of a High Dimensional Set of Densities
Normalize expression data using equivalently expressed genes
Modeling, Confidence Intervals and Equivalence of Survival
Curves
Calibrating Parameters for the Samejima's Continuous IRT Model
Estimation of Heritability in High Dimensional Sparse Linear
Mixed Models using Variable Selection
Estimation of the jump rate and simulation for
piecewise-deterministic Markov processes
Diagnostic Tools and Unit Tests for Statistical Estimators
Perform the Joint Graphical Lasso and Selects Tuning Parameters
Maximum Likelihood Estimation for Probability Functions from
Data Sets
Ethnicity Annotation from Whole Exome Sequencing Data
Ethnicity Annotation from Whole-Exome and Targeted Sequencing
Data
A Standard Dataset in the OMOP Common Data Model
Bayesian Single Arm Sample Size Calculation Software
Evaluation Clustering Methods for Disease Subtypes Diagnosis
Collection of Model Evaluation Measure Functions
Modelling Actual, Potential and Reference Crop
Evapotranspiration
Estimating Potential and Actual Evapotranspiration with Multiple
Models
Graphical User Interface for the 'EventDetectR' Package
Event-Specific Win Ratios for Terminal and Non-Terminal Events
Synthesizing Causal Evidence in a Distributed Research Network
A Seamless Integration of 'Eviews' and R
A Seamless Integration of 'EViews' and R
Pre- And Postprocessing of Morphological Data from Relaxed Clock
Bayesian Phylogenetics
Important Concepts of Evolutionary Game Theory
Quantile Maximization Likelihood Estimation and Bayesian
Ex-Gaussian Estimation
Exact Computation of Bivariate Projection Depth Based on Fortran
Code
Exploratory analysis with the singular value decomposition.
Exploratory Analysis with the Singular Value Decomposition
Exact Unconditional Tests for 2x2 Tables
Inductive Confidence Intervals for the difference between two
proportions
Inductive Confidence Intervals for the Difference Between Two
Proportions
Exact Mediation Analysis for Binary Outcomes
Exact Confidence Interval for binomial proportions
Exact solution paths for regularized LASSO regressions with L_1
penalty
ExactSampling: risk evaluation using exact resampling methods
for the k Nearest Neighbor algorithm.
Confidence Regions for Exceedance Regions and Contour Lines
Confidence regions for exceedance sets and contour lines
Confidence/Credible Regions for Exceedance Sets and Contour
Lines
Creating Tables of Excluded Observations
A Fast and Scalable Exhaustive Feature Selection Framework
Detect CNV and LOH from Exome Sequecing Data
Detect CNV and LOH from Exome Sequencing Data
Calls Copy Number Variants from Targeted Sequence Data
Pacote Para Analise De Experimentos Com Graficos De Superficie
Resposta
Modular Differential Evolution for Experimenting with Operators
Non-Additive Expression Analysis of Hybrid Offspring
Tool For Analysis of Images in Experiments
Design of Discrete Choice and Conjoint Analysis
Explanation of Predictions for Classification and Regression
Models
Calculate Exploded Coordinates Based on Original Node
Coordinates and Node Clustering Membership
Models Topographic Exposure to Hurricane Winds
Extending the Range of Functions for Probability Distributions
An Extended Mallows Model and Its Hierarchical Version for
Ranked Data Aggregation
Scores the FACT and FACIT Family of Patient-Reported Outcome
Measures
Variable selection for supervised classification in high
dimension
Variable Selection for Supervised Classification in High
Dimension
Functional Data Clustering Using Adaptive Density Peak Detection
A Convex Formulation for Modeling Interactions with Strong
Heredity
Factor Analysis for Multiple Testing (FAMT) : simultaneous tests
under dependence in high-dimensional data
Factor Analysis for Multiple Testing (FAMT) : Simultaneous Tests
under Dependence in High-Dimensional Data
A Flexible Algorithm for Model Selection (FAMoS)
A Flexible Algorithm for Model Selection
Evapotranspiration Based on FAO Penman-Monteith Equation
A complementary package to the FAOSTAT database and the
Statistical Yearbook of the Food and Agricultural Organization
of the United Nations.
Download Data from the FAOSTAT Database of the Food and
Agricultural Organization (FAO) of the United Nations
Fast and Robust Deconvolution of Tumor Infiltrating Lymphocyte
from Expression Profiles using Least Trimmed Squares
Joint Segmentation of Correlated Time Series
Distributions that are sometimes used in hydrology
Distributions that are Sometimes Used in Hydrology
Maximum Likelihood and Bayesian Estimation of Univariate
Probability Distributions
Functions and Datasets for "Forest Analytics with R".
Functions and Datasets for "Forest Analytics with R"
Phase I Optimal Dose Assignment using the FBCRM and MFBCRM
Methods
Algorithm for searching the space of Gaussian directed acyclic
graphical models through moment fractional Bayes factors
Algorithm for Searching the Space of Gaussian Directed Acyclic
Graph Models Through Moment Fractional Bayes Factors
FISH Based Normalization and Copy Number inference of SNP
microarray data
Flexible Cutoffs for Model Fit Evaluation in Covariance-Based
Structural Models
A Collection of Fluorescence Fluctuation Spectroscopy Methods
A Collection of Fluorescence Fluctuation Spectroscopy Analysis
Methods
Estimation and Inference for the Fractionally Cointegrated VAR
Measuring functional diversity (FD) from multiple traits
Measuring functional diversity (FD) from multiple traits, and
other tools for functional ecology
Measuring Functional Diversity (FD) from Multiple Traits, and
Other Tools for Functional Ecology
Multivariate Dependence with FDG Copulas
FDR-Control in Multiscale Change-Point Segmentation
Estimate, Plot, and Summarize False Discovery Rates
Compute Sample Size that Meets Requirements for Average Power
and FDR
False Discovery Exceedance Controlling Multiple Testing
Procedures
Fixed Effects Nonlinear Maximum Likelihood Models
Identification of Family Relations using linked markers
Fixed Effects Logistic Model with High-Dimensional Parameters
Generate, Visualise, and Compare Fast and Frugal Decision Trees
(FFTs)
Generate, Visualise, and Compare Fast and Frugal Decision Trees
Generate, Visualise, and Evaluate Fast-and-Frugal Decision Trees
Download Data from Kenneth French's Website
Force field simulation for a set of points
Truncated Functional Generalized Linear Models
Fractional Gaussian Noise, estimation and simulaton
Fractional Gaussian Noise (FGN) and simple models for hyperbolic
decay time series
Fractional Gaussian Noise and hyperbolic decay time series model
fitting
Fractional Gaussian Noise and power law decay time series model
fitting
Feature Grouping and Selection Over an Undirected Graph
Feature grouping and selection over an undirected graph
Fractional Hot Deck and Fully Efficient Fractional Imputation
Tests for right and interval-censored survival data based on the
Fleming-Harrington class
Tests for Right and Interval-Censored Survival Data Based on the
Fleming-Harrington Class
Provide functions for forest inventory calculations
Forest Inventory Estimation and Analysis
Utility Functions for Forest Inventory Estimation and Analysis
Transcriptomic Dynamics Models in Field Conditions
FITS (Flexible Image Transport System) utilities
FITS (Flexible Image Transport System) Utilities
Fast Kalman Filtering Through Sequential Processing
A Fast Large-Scale Almost Matching Exactly Approach to Causal
Inference
Interpretable Matching for Causal Inference
Core package of FLR, fisheries modelling in R.
Multithreaded Fixed Size Subset Sum with Bounded Error in
Multidimensional Real Domain
Multi-Threaded Multidimensional Fixed Size Subset Sum Solver and
Extension to General-Purpose Knapsack Problem
Mining Rigs for Specialized Subset Sum, Multi-Subset Sum,
Multidimensional Subset Sum, Multidimensional Knapsack,
Generalized Assignment Problems
Mining Rigs for Problems in the Subset Sum Family
Hidden Markov Model for Solar Geolocation Archival Tags
A Package for Reconstructing Animal Paths from Solar Geolocation
Loggers
Reconstruct Animal Paths from Solar Geolocation Loggers Data
Factorial Experiments with Minimum Level Changes
Efficient Estimation of Clustered Current Status Data
A Flexible Modelling Environment for inverse modelling,
sensitivity, identifiability, Monte Carlo analysis.
A Flexible Modelling Environment for Inverse Modelling,
Sensitivity, Identifiability, Monte Carlo Analysis.
A Flexible Modelling Environment for Inverse Modelling,
Sensitivity, Identifiability and Monte Carlo Analysis
Rhythmic Patterns Modeling by FMM Models
Filtered Monotonic Polynomial IRT Models
Regression Models with Finite Mixtures of Skew Heavy-Tailed
Errors
Fast Nearest Neighbor Search Algorighms and Applications
Fast Nearest Neighbor Search Algorithms and Applications
Feature Ordering by Conditional Independence
Automatic Processing of TLS Point Cloud Data for Forestry
Purposes
Automatic Processing of Terrestrial-Based Technologies Point
Cloud Data for Forestry Purposes
Two Dimensional Functional Principal Component Analysis
Three Dimensional Functional Component Analysis
Testing Hypotheses via Fuzzy P-Value in Fuzzy Environment
Financial Risk Modelling and Portfolio Optimisation with R
Download financial data from FRB's website
Download interest rate data from FRB's website
Fast Regularized Canonical Correlation Analysis
Tree Method for High Dimensional Longitudinal Data
FREQ: Estimate population size from capture frequencies
FeatuRE Selection Algorithms for Computer Aided Diagnosis
Feature Selection Algorithms for Computer Aided Diagnosis
Fast Robust Estimation of Signals in Heterogeneous Data
Post-Processing EddyPro Full Output File
Relative Importance of Main and Interaction Effects
Functional Regression using Signal Compression Approach
Functions for Simple Fisheries Stock Assessment Methods
Simple Fisheries Stock Assessment Methods
Data to Support Fish Stock Assessment (FSA) Package
Data to Support Fish Stock Assessment ('FSA') Package
Forward Stepwise Deep Autoencoder-Based Monotone NLDR
An Interface Between the 'FSK-ML' Standard and 'R'
An Interface Between the 'FSKX' Standard and 'R'
Imputation of Time Series Based on Fuzzy Logic
Generate Fully-Sequential Space-Filling Designs Inside a Unit
Hypercube
Unified Sequence-Based Association Tests Allowing for Multiple
Functional Annotation Scores
'Rcpp' Implementation of 'FSelector' Entropy-Based Feature
Selection Algorithms with a Sparse Matrix Support
Programs for Analyzing Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry Data
Programs for Analyzing Fourier Transform-Ion Cyclotron Resonance
Mass Spectrometry Data
FTRL Proximal Implementation for Elastic Net Regression
Selecting variables in regression models
Selecting Variables in Regression Models
Fresh Weight Determination from Visual Image of the Plant
Bayesian Sparse Factor Analysis model for the inference of
pathways responsive to drug treatment
Combination of Factorial Methods and Cluster Analysis
Automatic Description of Factorial Analysis
Multivariate Exploratory Data Analysis and Data Mining with R
Multivariate Exploratory Data Analysis and Data Mining
Machine Learning with Higher-Order Factorization Machines
Set of Assumptions for Factor and Principal Component Analysis
Factor Copula Models for Mixed Continuous and Discrete Data
Factor, Bi-Factor and Second-Order Copula Models
Factor, Bi-Factor, Second-Order and Factor Tree Copula Models
Identification of the Factors Affecting Species Richness
Perform Factorial Analysis from FactoMineR with a Shiny
Application
Perform Factorial Analysis from 'FactoMineR' with a Shiny
Application
Data from the book "Multivariate Statistical Modelling Based
on Generalized Linear Models" by Ludwig Fahrmeir and Gerhard Tutz
Data from the book "Multivariate Statistical Modelling Based
on Generalized Linear Models", first edition, by Ludwig Fahrmeir
and Gerhard Tutz
Data from the book "Multivariate Statistical Modelling Based on
Generalized Linear Models", first edition, by Ludwig Fahrmeir
and Gerhard Tutz
Data from the Book "Multivariate Statistical Modelling Based on
Generalized Linear Models", First Edition, by Ludwig Fahrmeir
and Gerhard Tutz
Clustering for Data with Sensitive Attribute
Simulation of Time-to-Event Family Data and Penetrance
Estimation
Family Age-at-Onset Data Simulation and Penetrance Estimation
Probabilities for Pedigrees given DNA data
Probabilities for Pedigrees Given DNA Data
Algorithm for Ranking Predictors Using Graphical Domain
Knowledge
Fast Estimation of a Covariance Matrix by Banding the Cholesky
Factor
Fast EM and Best-Subset Selection for CUB Models for Rating Data
Efficiently Using Gaussian Processes with Rcpp and RcppEigen
Fast and Exact Computation of Gaussian Stochastic Process
R package to compute the FastHCS outlyingness index.
FastHCS Robust Algortihm for Principal Component Analysis
Robust Algorithm for Principal Component Analysis
FastHCS Robust Algorithm for Principal Component Analysis
Learn from training data then quickly fill in missing data.
Learn from Training Data then Quickly Fill in Missing Data
Semi-Parametric Joint Modeling of Survival and Longitudinal Data
Semi-Parametric Joint Modeling of Longitudinal and Survival Data
A Fast Multiple-Kernel Method Based on a Low-Rank Approximation
Fast Nonconvex Deconvolution of Calcium Imaging Data
R package to compute the FastPCS Algorithm
R package to compute the FastPCS outlyingness index.
FastPCS Robust Fit of Multivariate Location and Scatter
R package to compute the FastRCS Algorithm
R package to compute the FastRCS outlyingness index.
FastRCS Robust Fit of Multivariable Linear Regression Model
Fits the FastRCS Robust Multivariable Linear Regression Model
Fast Interactive Framework for Web Scripting Using R
Power Hyperbolic Functions and Kiener Distributions
Kiener Distributions and Fat Tails in Finance
Quantification of Fate Bias in Multipotent Progenitors
Fault Trees for Risk and Reliability Analysis
Full Length Circular RNA Sequence Extraction and Classification
Implement Feature Hashing on Model Matrix
Creates a Model Matrix via Feature Hashing With a Formula
Interface
Creates a Model Matrix via Feature Hashing with a Formula
Interface
Feature Importance for Partitional Clustering
Feature Selection Engine to Remove Features with Minimal
Predictive Power
Functions to Automate Downloading Geospatial Data Available from
Several Federated Data Sources
Fertilizer Response Curve Analysis by Bootstrapping Residuals
A Shiny App for Design of Experiments in Life Sciences
Simulation of Plot-Level Data in Plant Breeding Field Trials
Financial Analysis and Regression Diagnostic Analysis
Classifies implicit trading activity from market quotes and
computes the probability of informed trading
Time Value of Money Calculation and Computational Finance
Time Value of Money, time series analysis and Computational
Finance
Time Value of Money, Time Series Analysis and Computational
Finance
Covariance Matrix Estimation and Regularization for Finance
Companion to Tsay (2005) Analysis of Financial
Time Series
Companion to Tsay (2005) Analysis of Financial Time Series
Financial Instrument Model Infrastructure for R
Financial Instrument Model Infrastructure and Meta-Data
Find all root(s) of the equation and Find root(s) of the
equation by dichotomy
R Package for Finding Heterogeneous Treatment Effects
Fine-Scale Population Analysis (Rewrite for
Gene-Trait-Environment Interaction Analysis)
Iterative FISH-based Calibration of Hi-C Data
Fuzzy Inference System Design and Optimization
Effective Protein Structural Data Visualisation and Exploration
Phylogenies for a List of Finned-Ray Fishes
An Analytical Tool for Aquatic Respirometry
Analytical Tool for Aquatic Respirometry
Model-Based Clustering in the Fisher Discriminative Subspace
The FisherEM Algorithm to Simultaneously Cluster and Visualize
High-Dimensional Data
FitARMA: Fit ARMA or ARIMA using fast MLE algorithm
Fit ARMA or ARIMA Using Fast MLE Algorithm
Fit Univariate Mixed and Usual Distributions
Fixed Sequence Multiple Testing Procedures
Algorithms for Finding Fixed Point Vectors of Functions
Tools to Work with the Flexible Dirichlet Distribution
Generalized Additive Models with Flexible Response Functions
Regression Models for Bounded and Binomial Responses
Flood Probability Plotting and Graphical Frequency Analysis
Cross-Scale Flooding Prediction under Heavy Precipitation
The Environmental Costs of Flow Regulation
Daily Streamflow Trend and Change Point Screening
Influenza-Attributable Mortality with Distributed-Lag Models
Estimation of background-subtracted fluorescence data
Estimate Migration Birds Flyways Network with HSMM
Functions from the 2nd Italian Forest Inventory (INFC)
Functions to Estimate Tree Volume and Phytomass in the Italian
Forest Inventory 2005
Imputation of missing values through a forward imputation
algorithm
Imputation of Missing Values Through a Forward Imputation
Algorithm
Organization Measures for Visual Foraging
ForeCA - Forecastable Component Analysis
Test Bench for the Comparison of Forecast Methods
Statistical Modelling using Weibull Distribution
Statistical Modelling with Applications in Forestry
Statistical Modelling for Plant Size Distributions
Elementary arithemtic in formal series rings
A Game for Human vs. Human or Human vs. AI
Parsimonious Hidden Markov Models for Four-Way Data
Generate images using Fourier descriptors.
Package for analysing Fractional Factorial designs with 2-level factors
Fractional Factorial designs with 2-level factors
Fractional Factorial Designs with 2-Level Factors
Complete catalogues of resolution IV 128 run 2-level fractional
factorials up to 24 factors
Catalogues of resolution IV 128 run 2-level fractional
factorials up to 24 factors that do have 5-letter words
Catalogues of resolution IV 128 run 2-level fractional
factorials up to 33 factors that do have 5-letter words
Catalogues of Resolution IV 128 Run 2-Level Fractional
Factorials Up to 33 Factors that Do Have 5-Letter Words
Estimation of Parameters p and q for Randomized Sierpinski
Carpet for [p-p-p-q]-Model
Simulation and Parameter Estimation of Randomized Sierpinski
Carpets using the p-p-p-q-Model
Estimation of Parameters p and q for Randomized Sierpinski
Carpet for p-p-p-q-Model
Frequency Profiles Computing and Plotting
Functional Cheng and Church Bi-Clustering
Chi-Square Tests for Non-Parametric Functional Dependencies
Chi-Square and Exact Tests for Non-Parametric Functional
Dependencies
Chi-Square and Exact Tests for Model-Free Functional Dependency
Model-Free Functional Chi-Squared and Exact Tests
Functional Profiling of cDNA Microarray Expression Data
Functional Profiling of Microarray Expression Data
Functional Analysis of Gene Co-expression Networks
Integrative Functional Analysis of Transcriptional Networks
A package for functional data clustering.
FunctSNP - SNP annotation data methods and species specific
database builder
Functional Analysis (with Interactions) for Dense SNP Data
An algorithm for gene and gene set network inference
Funnel Plots for Indirectly-Standardised Ratios
Funnel Plots for Comparing Institutional Performance
Community Detection via Fused Principal Component Analysis
Multi-Criteria Decision Making Methods for Fuzzy Data
Apply Two Fuzzy Numbers on a Monotone Function
Fuzzy Quantification of Common and Rare Species
Resampling Methods for Triangular and Trapezoidal Fuzzy Numbers
Fuzzy stationary probabilities from a sequence of observations
of an unknown Markov chain
Fuzzy Stationary Probabilities from a Sequence of Observations
of an Unknown Markov Chain
Statistical Methods for Trapezoidal Fuzzy Numbers
Package 'FuzzyStatTra' in Encapsulated Object Oriented
Programming
A package performing Dynamic Bayesian Network inference.
Grain-size Statistics and Description of Sediment
Grain-Size Statistics and Description of Sediment
A genetic algorithm approach to determine stratum boundaries and
sample sizes of each stratum in stratified sampling
Framework for Generalized Subspace Pattern Mining
Genetic Similarity in User-Based Collaborative Filtering
General ANOVA Design (GAD): Analysis of variance from general
principles
GAD: Analysis of variance from general principles
A Genetic Algorithm for Learning Directed Acyclic Graphs
Gaussian Process Approximations for Designing Experiments
Global Adaptive Generative Adjustment Algorithm for Generalized
Linear Models
Graphical Extension with Accuracy in Parameter Estimation
(GAIPE)
Genomic Annotation in Livestock for Positional Candidate LOci
Generalized additive models by likelihood based boosting
Generalized linear and additive models by likelihood based boosting
Generalized linear and additive models by likelihood based
boosting
Applies GAMbag, GAMrsm and GAMens ensemble classifiers for
binary classification
Applies GAMbag, GAMrsm and GAMens Ensemble Classifiers for
Binary Classification
Gene Association Network-based Pathway Analysis
Gene Association Network-Based Pathway Analysis (GANPA)
Authorize and Request Google Analytics Data
Estimating a GARCHSK Model and GJRSK Model
Gene and Region Counting of Mutations ("GARCOM")
Abbreviating Questionnaires (or Other Measures) Using Genetic
Algorithms
Abbreviating Items Measures using Genetic Algorithms
Searching Parsimony Models with Genetic Algorithms
Generalized Beta Distribution of the Second Kind: properties,
likelihood, estimation.
Generalized Beta Distribution of the Second Kind: Properties,
Likelihood, Estimation
Estimation of the Generalised Beta Distribution of the Second
Kind from Grouped Data
Generalized Berk-Jones Statistic for Set-Based Inference
Generalized Berk-Jones Test for Set-Based Inference in Genetic
Association Studies
Yield Curves of Brazil, China, and Russia
Guided Correction Approach for Inherited bias (GCAI.bias)
Bayesian Meta-Analysis of Pleiotropic Effects Using Group
Structure
Implements Generic Composite Similarity Measure
A Data Manipulation and Analysis Package for Calcium Indicator
Data
Simple Peak Alignment for Gas-Chromatography Data
Geographical Detectors for Assessing Spatial Factors
Datasets for the Book Graphical Data Analysis with R
A toolbox for the analysis of categorical data in social
sciences, and especially Geometric Data Analysis.
A Toolbox for the Analysis of Categorical Data in Social
Sciences, and Especially Geometric Data Analysis
A Toolbox for Geometric Data Analysis and More
GD device for creating bitmap graphics as jpeg, png or gif files using gd library
GD device for creating bitmap graphics as jpeg, png or gif files
using gd library
Download, slice, and normalize GDELT data
Download, Slice, and Normalize GDELT V1 Data
Gauss - Dantzig Selector: Aggregation over Random Models
Adaptive Association Tests for Multiple Phenotypes using
Generalized Estimating Equations (GEE)
Mediation Analysis for Generalized Linear Models Using the
Difference Method
Gene-Environment Interaction Analysis Incorporating Prior
Information
Segmentation and Classification of Accelerometer Data
Visualisation of Raw or Segmented Accelerometer Data
Implements Generalized Meta-Analysis Using Iterated Reweighted
Least Squares Algorithm
Estimation and Fit Diagnostics for Generalized Exponential
Random Graph Models
Generalized Extended Triangular Designs ('GETdesigns')
Joint Test of Gene and GxE Interactions via Varying Coefficients
ARMA-GARCH/APARCH models with GEV and stable distributions
ARMA-GARCH/APARCH Models with GEV and Stable Distributions
GEV conditonal density estimation network
GEV conditional density estimation network
GEV Conditional Density Estimation Network
Misspecified Models for Gene-Environment Interaction
R functions for analysis genomic distribution of genes lists
produced by transcriptomic studies
A visual, intuitive, easy to use software giving access to a new
type of information buried into your microarray data.
Tests for Survival Data in General Factorial Designs
Gross Flows Estimation under Complex Surveys
Visualization technique for interpretation of high-throughput genetic or proteomic experiments.
Clustering and Inference Procedures for High-Dimensional Latent
Variable Models
Generalized Fisher's Combination Tests Under Dependence
Gabriel Graph Based Large-Margin Classifiers
GGEBiplotGUI: Interactive GGE Biplots in R
Wearable Accelerometer Data File Readers
Gaussian Graphical Models with Non-Convex Penalties
Gaussian Graphical Models with Nonconvex Regularization
Gaussian Graphical Models Using Ridge Penalty Followed by
Thresholding and Reestimation
Graphical Horseshoe MCMC Sampler Using Data Augmented Block
Gibbs Sampler
A General Iterative Clustering Algorithm
GIFT Questions Format Generator from Dataframes
Random variate generator for the GIG distribution
Random Variate Generator for the GIG Distribution
Gaines and Kuklinski (2011) Estimators for Hybrid Experiments
Fitting Single and Mixture of Generalised Lambda Distributions
Fit GLD Regression Model and GLD Quantile Regression Model to
Empirical Data
Fit GLD Regression/Quantile/AFT Model to Data
Global and Individual Tests for Direct Effects
Generalised Linear Mixed Models by Gibbs Sampling
Generalized Linear Mixed Model (GLMM) for Binary Randomized
Response Data
Generalized Linear Mixed Models using Adaptive Gaussian
Quadrature
Generalized Linear Multilevel Model with AR(p) Errors Package
An Adaptive Test on High Dimensional Parameters in Generalized
Linear Models
Generalized Linear Models for Categorical Responses
Data and Code to Accompany Generalized Linear Models, 2nd
Edition
Generalized Least Squares with Measurement Error
Genomic Mediation Analysis with Adaptive Confounding Adjustment
Fast estimation of Gaussian Mixture Copula Models
Fast Estimation of Gaussian Mixture Copula Models
Generalized Minimum Distance of distributions
Predicting and Forecasting Time Series via GMDH-Type Neural
Network Algorithms
Short Term Forecasting via GMDH-Type Neural Network Algorithms
Binary Classification via GMDH-Type Neural Network Algorithm
Binary Classification via GMDH-Type Neural Network Algorithms
Unsupervised Gaussian Mixture and Minkowski K-Means
Unsupervised Gaussian Mixture and Minkowski and Spherical
K-Means with Constraints
Generalized Linear Mixed Model Association Tests
Likelihood-based Boosting for Generalized mixed models
Likelihood-Based Boosting for Generalized Mixed Models
Generalised Management Strategy Evaluation Simulator
Generalized Mass Spectrum Missing Peaks Abundance Imputation
Methods for Fitting Network Time Series Models
Computation of generalized Nash equilibria
Computation of Generalized Nash Equilibria
Access the 'Geographic Name Resolution Service'
Comprehensive GO Terms Comparison Between Species
Goodness-of-fit tests for the family of skew-normal models
Interactive Document for Working with Goodness of Fit Analysis
Fit Generalized Odds Rate Mixture Cure Model with Interval
Censored Data
Computation of functional similarities between GO terms and gene products
Computation of functional similarities between GO terms and gene products; GO enrichement analysis
Computation of functional similarities between GO terms and gene
products; GO enrichement analysis
Computation of functional similarities between GO terms and gene
products; GO enrichment analysis
Visualization of Functional Analysis Data
Visualization Of Functional Analysis Data
Word cloud summaries of GO enrichment analysis
Structural Exploration of the Gene Ontology (GO) Knowledge Base
Tools for Gaussian Process Modeling in Uncertainty
Quantification
Gaussian Processes for Estimating Causal Exposure Response
Curves
Differential Item Functioning in Generalized Partial Credit
Models
GPCSIV, Generalized Principal Component of Symbolic Interval
variables
Apply Gaussian Process in Functional data analysis
Gaussian Process Regression for Functional Data Analysis
Gaussian Process for Functional Data Analysis
Solving Complex Game Problems using Gaussian Processes
Quantifying Group Performance in Individual Competitions
Convert Chip ID of the GPL2015 into GeneBank Accession and
ENTREZID
Generalized Partially Linear Tree-based Regression Model
Generalized Partially Linear Tree-Based Regression Model
Gaussian Process Modeling of Multi-Response Datasets
Gaussian Process Modeling of Multi-Response and Possibly Noisy
Datasets
Calculate Gross Primary Production (GPP) from O2 Time Series
Gaussian Process Regression for Mortality Rates
Generalized Propensity Score Cumulative Distribution Function
Sequential Clustering Algorithm for Location Data
Gaussian Processes for Pareto Front Estimation and Optimization
Lyapunov Exponents and Kaplan-Yorke Dimension
Gaussian Process Ranking of Multiple Time Series
gpseq: Using the generalized Poisson distribution to model
sequence read counts from high throughput sequencing
experiments
Maximum Likelihood Estimation of the Generalized Persistence
Value-Added Model
Maximum Likelihood Estimation of the Multiple Membership Mixed
Models Used in Value-Added Modeling
Maximum Likelihood Estimation of Multiple Membership Mixed
Models Used in Value-Added Modeling
Creating Continuously Integrated Package Repositories from
Manifests
Gene-Ranking Analysis of Pathway Expression
Interface between GRASS geographical information system and R
Interface between GRASS 5.0 geographical information system and R
Interface between GRASS 5.0 geographical information system and
R
Parameter Inference and Optimal Designs for Grouped and/or
Right-Censored Count Data
Geospatial Regression Equation for European Nutrient Losses
(GREEN)
GEO RNA-Seq Experiments Processing Pipeline
Bivariate Copula Functions Based on Regular Grid
General Regression Neural Networks Package
Goodness-of-Fit Tests in High-Dimensional GLMs
GRS Test for Portfolio Efficiency and Its Statistical Power
Analysis
GRS Test for Portfolio Efficiency, Its Statistical Power
Analysis, and Optimal Significance Level Calculation
Testing Gene-Environment Interactions Through Genetic Risk
Scores
Tools for the analysis of Gutenberg-Richter distributions of
earthquake magnitudes
Tools for the Analysis of Gutenberg-Richter Distributions of
Earthquake Magnitudes
Species distribution modelling using latent Gaussian random
fields
Gene Set Analysis with Fisher Combined Method
Gene Set Analysis using the Gamma Method
Implementing GSCAD Method for Image Denoising and Inpainting
Robust Estimation of Multivariate Location and Scatter in the
Presence of Missing Data
Robust Estimation in the Presence of Cellwise and Casewise
Contamination and Missing Data
Download, Clean and Generate New Variables from GSOD Data
Global Surface Summary of the Day (GSOD) Weather Data from R
Global Surface Summary of the Day ('GSOD') Weather Data Client
The Generalized Time-Dependent Logistic Family
Implementation of sampling formulas for the unified neutral
model of biodiversity and biogeography, with or without guild
structure.
Implementation of Sampling Formulas for the Unified Neutral
Model of Biodiversity and Biogeography, with or without Guild
Structure
Graphical User Interface for Generalized Multistate Simulation
Model
GUTS: Fast Calculation of the Likelihood of a Stochastic
Survival Model
Fast Calculation of the Likelihood of a Stochastic Survival
Model
Generalized UniFrac Distances and Distance-Based Multivariate
Analysis of Variance
Generalized UniFrac Distances, Distance-Based Multivariate
Methods and Feature-Based Univariate Methods for Microbiome
Data Analysis
Perform Stationary Global Vector Autoregression Estimation and
Inference
Perform Global Vector Autoregression Estimation and Inference
Genome-Wide Association analyses with Family data
Genome-wide association/interaction analyses with family data
Genome-wide association/interaction analysis and rare variant
analysis with family data
Genome-Wide Association/Interaction Analysis and Rare Variant
Analysis with Family Data
Exact Hardy-Weinburg testing for Genome Wide Association Studies
Identifying Significant SNPs in Genome Wide Association Studies
(GWAS) via Clustering
Nonlocal Prior Based SNP Selection Tool for Genome-Wide
Association Studies
Nonlocal Prior Based Iterative SNP Selection Tool for
Genome-Wide Association Studies
Non-Local Prior Based Iterative Variable Selection Tool for
Genome-Wide Association Studies
Comprehensive and Easy to Use Quality Control of GWAS Results
Multi-Site Stochastic Models for Daily Precipitation and
Temperature
Calculation of probabilities for inadequate and excessive
gestational weight gain
Count and Continuous Generalized Variability Indexes
Geographically Weighted Logistic Elastic Net Regression
Generalized Waring Regression Model for Count Data
GroundWater Spatiotemporal Data Analysis Tool (GWSDAT)
Geographically Weighted Non-Negative Principal Components
Analysis
Geographically Weighted Partial Correlation Coefficient
Genome-wide significance for whole genome sequencing studies
Estimating Genome-Wide Significance for Whole Genome Sequencing
Studies, Either Single SNP Tests or Region-Based Tests
First Passage Time Simulation for Gaussian Diffusion Processes
Train and Apply a Gaussian Stochastic Process Model
Tools for Calculating Allocations in Game Theory
classic gamma regression: joint modeling of mean and shape
parameters
Classic Gamma Regression: Joint Modeling of Mean and Shape
Parameters
Conservation Indicators using Spatial Information
Tabular Data Suppression using Gaussian Elimination
Inference, Goodness-of-Fit and Forecast for Univariate Gaussian
Hidden Markov Models
Spatial Graph-Theoretic Genetic Gravity Modelling
Package contains data which is used by GenABEL example and test
functions
Classes and Methods to Use Genetic Algorithms for Feature
Selection
Clopper-Pearson Confidence Interval and Generalized Binomial
Distribution
Genetic Class Association Testing (GenCAT)
The Forward Imputation: A Sequential Distance-Based Approach for
Imputing Missing Data
Goodness-of-Fit for Univariate Hidden Markov Models
Functions for generating and manipulating generalised binned kernel density estimates
Functions for generating and manipulating generalised kernel density estimates
Functions for generating and manipulating kernel density estimates
Functions for generating and manipulating binned kernel density
estimates
Simulation of ordinal and discrete variables with given
correlation matrix and marginal distributions
Simulation of Ordinal and Discrete Variables with Given
Correlation Matrix and Marginal Distributions
Simulation of Discrete Random Variables with Given Correlation
Matrix and Marginal Distributions
R functions for Generalized Simulated Annealing
Functions for Generalized Simulated Annealing
R Functions for Generalized Simulated Annealing
Spline Based Window Boundaries for Genomic Analyses
This is a Collection of Functions to Analyse Gender Differences
Gene Expression Clustering and Gene Network
Identification of Periodically Expressed Genes
Bayesian calculation of gene-specific FST from genomic SNP data
Relevance or Dependency network and signaling pathway discovery
Construct time delay gene regulatory network
Genetic Time Series and Graphical Models
Microarray Time Series and Network Analysis
Simulation and analysis of spatial structure of population
genetics data
MCMC inference from individual genetic data based on a spatial statistical model
Simulation and MCMC inference in landscape genetics
Simulation and MCMC inference for subdivided populations
Simulation and MCMC inference of structure from genetic data
Detection of structure from multilocus genetic data.
Detection of Structure from Multilocus Genetic Data
Blinder-Oaxaca Decomposition for Generalized Linear Model
Test for Conditional Independence Based on the Generalized
Covariance Measure (GCM)
Credible Visualization for Two-Dimensional Projections of Data
Fully Parameterized Generalized Wendland Covariance Function
Identify Favorable Subsets of Germplasm Collections
Collection of Genetic Data Analysis Tools.
Collection of Genetic Data Analysis Tools
A Genome-Wide Scan Statistic Framework for Whole-Genome Sequence
Data Analysis
Detecting Signatures of Local Adaptation Based on Ancestry
Trajectories
Collection of Tools for Genomic Data Analysis
A geometrical Approach to Differential expression and gene-set
enrichment
Spatial Data Processing for Decision Making
Quantification of the effect of geographic versus environmental
isolation on genetic differentiation
Procedures for Gaussian and Non Gaussian Geostatistical (Large)
Data Analysis
Calculating Geographic Range from Occurrence Data
Processed a various types of data on GEO and TCGA
Processing various types of data on GEO and TCGA
User-Friendly Interface for Geographically-Weighted Models
Interactive exploratory spatial data analysis
Download and Augment the Corpus of Plenary Protocols of the
German Bundestag
Germination Indexes for Seed Germination Variables for
Ecophysiological Studies
Germination Indices and Graphics for Seed Germination in
Ecophysiological Studies
Indices and Graphics for Assess Seed Germination Process
Imports Datasets from BCB (Central Bank of Brazil) using Its
Official API
Reading Annual Financial Reports from Bovespa's DFP, FRE and FCA
System
Reading Annual and Quarterly Financial Reports from B3
Reading FRE Corporate Data of Public Traded Companies from B3
Download and Aggregate High Frequency Trading Data from Bovespa
Reading Quarterly Financial Reports from Bovespa's ITR System
Reading Financial Reports from Bovespa's ITR System
Reading Bibliometric Data from Lattes Platform
Fast and Cached Import of Data from 'Quandl' Using the 'json
API'
GetR: Calculate Guttman error trees in R
Get Data for Brazilian Bonds (Tesouro Direto)
Parse command-line arguments and variable interpolation
Parsing Command-line Arguments and Variable Interpolation
Parsing Command-Line Arguments and Variable Interpolation
Parsing Command-Line Arguments and Simple Variable Interpolation
Quantifying Evolution and Selection on Complex Traits
Missing Data Segments Imputation in Multivariate Streams
The Knockoff Inference Using Summary Statistics
Gene Set Uncertainty in Enrichment Analysis
Gibbs Sampler for One-Way Mixed-Effects ANOVA and ANCOVA Models
Multivariate Analysis with Optimal Scaling
Gillespie's Stochastic Simulation Algorithm (SSA)
Gillespie's Stochastic Simulation Algorithm for Impatient People
A New Gini Correlation Between Quantitative and Qualitative
Variables
Computing the Gini-Based Coefficients for Weighted and Negative
Attributes
Computing the Gini Coefficient for Weighted and Negative
Attributes
Constructing panels of population pyramid plots based on lattice
Variable Selection in Sparse GLARMA Models
Creates Ideal Data for Generalized Linear Models
Bi-Level Optimization of Metabolic Network Models
Generate functions to get or set global options
Generate Functions to Get or Set Global Options
Geometric Median, k-Median Clustering and Robust Median PCA
Geometric Median, k-Medians Clustering and Robust Median PCA
Descriptive Statistics, Transition Plots, and More
GoFKernel: Testing Goodness-of-fit with the Kernel Density
Estimator
Testing Goodness-of-fit with the Kernel Density Estimator
Testing Goodness-of-Fit with the Kernel Density Estimator
Goodness-of-Fit Methods for Right-Censored Data
Khmaladze Martingale Transformation Goodness-of-Fit Test
Animate Text using the 'Animate.css' Library
Association Analysis for Categorical Variables
Create Array Data from 2D Image Thumbnails via Google Image
Search
Retrieve Information from 'Google Knowledge Graph' API
C++ Wrapper for R which Does Alignments using Gotoh Algorithm
Fast Gaussian Process Computation Using Vecchia's Approximation
Graph-Constrained Estimation and Hypothesis Testing
Graph-Constrained Estimation and Hypothesis Tests
Graphical Representation and Modeling of Metagenomic Reads
Network Topology of Intravariable Clusters with Intervariable
Links
Estimating Structural Invariants of Graphical Models
GraphPCA, Graphical tools of histogram PCA
A multiplatform GUI for drawing highly customizable common
graphs in R
A multiplatform GUI for drawing customizable graphs in R
A multi-platform GUI for drawing customizable graphs in R
A Multi-Platform GUI for Drawing Customizable Graphs in R
Greedy Stochastic Block Transition Models
Joint Discretization of Data on a Grid that Preserves Clusters
Cluster-Preserving Multivariate Joint Grid Discretization
Executes functions on remote hosts, clusters or grids.
Uses Grieg-Smith method on 2 dimentional spatial data
Calculate Optical Parameters from Spindle Stage Measurements
Learn Group Bayesian Networks using Hierarchical Clustering
Inferring Group Bayesian Networks using Hierarchical Feature
Clustering
Performing computations related to groupseqential boundaries.
Performing computations related to group sequential designs.
A GUI-based program to compute probabilities regarding group
sequential designs.
A GUI-Based Program to Compute Probabilities Regarding Group
Sequential Designs
Group Sequential Design Probabilities - With Graphical User
Interface
Multiple Testing Procedure for Grouped Hypotheses
Patterns and Statistical Differences Between Two Groups of
Strings
Estimation of the Generalized Symmetry Point, an Optimal
Cutpoint in Continuous Diagnostic Tests
Guerry: maps, data and methods related to Guerry (1833) "Moral
Statistics of France"
Maps, data and methods related to Guerry (1833) "Moral
Statistics of France"
Maps, Data and Methods Related to Guerry (1833) "Moral
Statistics of France"
Run GWAS/GWEIS Scans Using Binary Dosage Files
Maximum Likelihood Estimation for Gene-by-Measured Environment
Interaction Models
Sample Size Calculation in Hierarchical 2x2 Factorial Trials
Estimation, simulation and visualization of Hierarchical
Archimedean Copulae (HAC)
Estimation, Simulation and Visualization of Hierarchical
Archimedean Copulae (HAC)
Iterative Extrapolation of Species' Haplotype Accumulation
Curves
Iterative Extrapolation of Species' Haplotype Accumulation
Curves for Genetic Diversity Assessment
Hierarchical Bayesian Space-Time models for Gaussian space-time
data.
Hierarchical Bayesian Space-Time Models for Gaussian Space-Time
Data
Decoupled Hydrological Model for Research and Education Purposes
Hierarchical Bayesian Regression for GLMs
Hierarchical Community Detection by Recursive Partitioning
Causal Discovery on Discrete Data using Hidden Compact
Representation
Causal Discovery from Discrete Data using Hidden Compact
Representation
Calculates Significance Criteria and Power for a Single Arm
Trial
Group Sequential Design for Historical Control Trial with
Survival Outcome
Regression with a Large Number of Potential Explanatory
Variables
High Dimensional Bayesian Ridge Regression without MCMC
High Dimensional Confidence Interval Based on Lasso and
Bootstrap
Sample Size Calculation for High Dimensional Classification
Study
Tests for High Dimensional Generalized Linear Models
Distribution-Free Exact High Dimensional Low Sample Size
k-Sample Tests
Statistical Analysis Tools for High Dimension Molecular Data
(HDMD)
A Multiple Testing Procedure for High-Dimensional Mediation
Hypotheses
High-Dimensional Orthogonal Maximin Distance Designs
Multivariate and Functional Spatial Scan Statistics
High Dimensional Stimulation Immune Mapping ('HDStIM')
High Dimensional Time Series Analysis Tools
High Dimensionnal Supervised Classification and Clustering
High Dimensional Supervised Classification and Clustering
Clustering High Dimensional Data with Hidden Markov Model on
Variable Blocks
Detect Change Points in Means of High Dimensional Data
Leland Wilkinson's Algorithm for Detecting Multidimensional
Outliers
High Dimensional Hypothesis Testing for Mean Vectors, Covariance
Matrices, and White Noise of Vector Time Series
The Lasso for the Tweedie's Compound Poisson Model Using an
IRLS-BMD Algorithm
The Lasso for Tweedie's Compound Poisson Model Using an IRLS-BMD
Algorithm
Health Effects of Air Pollution and Temperature (HEAT)
Hierarchical Ensemble Methods for Directed Acyclic Graphs
MLE and Bayesian Estimation of Heteroskedastic Ordered Probit
(HETOP) Model
excel connections, garbage collection,string matching and passing by reference
csv import, csv export, garbage collection,string matching and passing by reference
csv import, csv export, garbage collection,string matching and
passing by reference
Heterogeneous Graphical Model for Non-Negative Data
Handy functions for working with HGNC gene symbols and
Affymetrix probeset identifiers.
Handy Functions for Working With HGNC Gene Symbols and
Affymetrix Probeset Identifiers.
Handy Functions for Working with HGNC Gene Symbols and
Affymetrix Probeset Identifiers
Identify and Correct Invalid HGNC Human Gene Symbols and MGI
Mouse Gene Symbols
Statistical Analysis and Data Display: Heiberger and Holland
Support software for Statistical Analysis and Data Display by
Richard M. Heiberger and Burt Holland
Heller-Heller-Gorfine Tests of Independence and Equality of
Distributions
Simulation from distributions supported by nested hyperplanes
Simulation from Distributions Supported by Nested Hyperplanes
HIBAG -- HLA Genotype Imputation with Attribute Bagging
Bindings for the HaveIBeenPwned.com Data Breach API
Bindings for the 'HaveIBeenPwned.com' Data Breach API
HIV calibrated model life tables for countries with generalized
HIV epidemics
Conversion Tools for HK80 Geographical Coordinate System
Apps and Data for the Book "Introduction to Statistics"
Diagnostic tools for two-level normal hierarchical linear models
Diagnostic tools for hierarchical (multilevel) linear models
Diagnostic Tools for Hierarchical (Multilevel) Linear Models
Hierarchical latent space network model (HLSM)
Hierarchical Latent Space Network Model (HLSM)
Read Human Mortality Database and Human Fertility Database Data
from the Web
Hidden Markov Model for Continuous Observations Processes
A Fast Solver for Henderson Mixed Model Equation via Row
Operations
Markov Regime Switching Copula Models Estimation and Goodness of
Fit
The HMMmix (HMM with mixture of gaussians as emission
distribution) package
Determine the Number of States in Hidden Markov Models via
Marginal Likelihood
Improved Analysis of Marine Animal Movement Data Using Hidden
Markov Models
Analysing Accelerometer Data Using Hidden Markov Models
Analysing accelerometer data using hidden Markov models
Hypothesis Testing and Power Calculations for Comparing
Metagenomic Samples from HMP
Statistical Object Oriented Data Analysis of RDP-based Taxonomic
trees from Human Microbiome Data: Modeling, Visualization, and
Two-Group Comparison
Statistical Object Oriented Data Analysis of RDP-Based Taxonomic
Trees from Human Microbiome Data
Flux estimation with static chamber data
Flux Estimation with Static Chamber Data
Group Association Test using a Hidden Markov Model
High-Probability Lower Bounds for the Total Variance Distance
A set of annotation maps describing the Human Phenotype Ontology
Analysis similarities between HPO terms and phenotypic
similarity between genes and between diseases.
Analysis semantic similarity between HPO terms and HPO-based
phenotypic similarity between genes and between diseases.
Heligman Pollard mortality model parameter estimation using
Bayesian Melding with Incremental Mixture Importance Sampling
Superefficient Estimation of Future Conditional Hazards Based on
Marker Information
Datasets, Functions and Scripts for Semiparametric Regression
Supporting Harezlak, Ruppert & Wand (2018)
Homogenous Segmentation for Spatial Lines Data
Hierarchical Spatial Autoregressive Model (HSAR)
A Handbook of Statistical Analyses Using R
A Handbook of Statistical Analyses Using R (1st Edition)
A Handbook of Statistical Analyses Using R (2nd Edition)
A Handbook of Statistical Analyses Using R (3rd Edition)
Homogeneity and Sparsity Detection Incorporating Prior
Constraint Information
Hidden Smooth Polynomial Regression for Rupture Detection
Joint meta-analysis of diagnostic test sensitivity and
specificity with or without a gold standard reference test
Meta-Analysis of Diagnostic Test Accuracy when Reference Test is
Imperfect
Bayesian Logistic Regression with Heavy-Tailed Priors
Facilitates automated HTML report creation
Facilitates Automated HTML Report Creation
Haplotype Trend Regression with eXtra Flexibility (HTRX)
Clustering high throughput sequencing (HTS) data
Clustering High-Throughput Transcriptome Sequencing (HTS) Data
Differential analysis of RNA-seq data with Poisson mixture
models
Differential Analysis of RNA-Seq Data with Poisson Mixture
Models
High Throughput Sequencing of Stable Isotope Probing Data
Analysis
compute HUM value and visualize ROC curves
Compute HUM Value and Visualize ROC Curves
Testing Hardy-Weinberg Equilibrium for Multiallelic Genes
Bayesian investigation of Hardy-Weinberg Equilibrium via
estimation and testing.
Objective Bayesian Testing for the Hardy-Weinberg Equilibrium
Problem
Exact Tests for Hardy-Weinberg Proportions
Tools for Processing and Analysing Files from the Hydrological
Catchment Model HYPE
Hybrid Methods for Addressing Uncertainty in RISK Assessments
Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass
Spectrometry Data
Utilities for using R scripts in Hadoop streaming
Univariate non-parametric two-sample test based on empirical
Hankel transforms.
Inference of Chromosome-Length Haplotypes Using Genomic Data of
Single Gamete Cells
Analyzing case-parent triad and/or case-control data with SNP
haplotypes
Analyzing Case-Parent Triad and/or Case-Control Data with SNP
Haplotypes
Graphical tests for Hardy-Weinberg equilibrium
Graphical Tests for Hardy-Weinberg Equilibrium
Statistical Tests and Graphics for Hardy-Weinberg Equilibrium
Harmonic Regression to One or more Time Series
Conditional Treatment Effect for Competing Risks
Fit Normal or Student-t Heckman Selection Models
Tools for Environmental Analyses, Ecotoxicology and Various R
Functions
Heritability of Gene Expression for Next-Generation Sequencing
Test of No Main and/or Interaction Effects in Functional Data
Gaussian Graphical Model-Based Heterogeneity Analysis
Integrated Tool for Hairping Extraction of RNA Sequences
Hierarchical Heterogeneity Analysis via Penalization
Systematic Analysis of Architectural Proteins and Functional
Elements in Blocking Long-Range Contacts Between Loci
Multiple Logistic Regression for 3D Chromatin Domain Border
Analysis
Probing Factor-Dependent Long-Range Contacts using Regression
with Higher-Order Interaction Terms
Hierarchical Climate Regionalization: An Improved Hierarchical
Clustering in R for Climate Regionalization
Inference on High Dimensional Max-Stable Distributions
Estimation of heritability in high dimensional Linear Mixed
Models
Estimation of Heritability in Linear Mixed Models
Non-Targeted Fluxomics on High-Resolution Mass-Spectrometry Data
Partitioning Hierarchical Diversity and Differentiation Across
Metrics and Scales, from Genes to Ecosystems
A graphical user interface for calculating power and sample size
for hierarchical data
Hierarchical Clustering-Based Portfolio Allocation Strategies
Outlier Detection Algorithms for High-Dimensional Data
HighProbability estimates which alternative hypotheses have frequentist or Bayesian probabilities at least as great as a specified threshold, given a list of p-values.
Implementation of Voting Rules Electing the Candidate with
Highest Median Grade
Summary Statistics for Histogram/Count Data
Data sets from the history of statistics and data visualization
Data Sets from the History of Statistics and Data Visualization
Hierarchical Model of Species Communities
Supplemental Functions and Datasets for "Handbook of Regression
Methods"
Holiday and halfday data, for use with the TimeWarp package
Holiday and Half-Day Data, for Use with the 'TimeWarp' Package
Theoretical Model to Simulate Radical Polymerization
BFV, BGV, CKKS Schema for Fully Homomorphic Encryption
Simulate the Extent of Host Switching by Consumers
Hot Deck Imputation Methods for Missing Data.
Hot Deck Imputation Methods for Missing Data
Hotelling T-Square and Confidence Ellipse
HumMeth27QCReport: quality control and preprocessing of
Illumina's Infinium HumanMethylation27 BeadChip methylation
assay.
HumMeth27QCReport: quality control and preprocessing of
Illumina's Infinium methylation assays.
Models Hurricane Wind Speed, Wind Direction, and Wind Damage
Macroevolutionary phylogentic analysis of species trees and gene
trees
Multicriteria Risk Management using Zero-Sum Games with
Vector-Valued Payoffs that are Probability Distributions
A Hybrid Filter-Wrapper Feature Selection Method
Implementation of the Hybrid Monte Carlo and Multipoint Hybrid
Monte Carlo sampling techniques
Hybrid Bayesian Networks Using R and JAGS
Estimation of Soil Hydraulic Parameters from Experimental Data
Estimating Water Retention and Infiltration Model Parameters
using Experimental Data
R codes for estimating water retention and infiltration model
parameters using experimental data
Hypergeometric Function of a Matrix Argument
Thermophysical Properties of Water and Steam
Model selection for index of asymmetry distribution
Model Selection for Index of Asymmetry Distribution
Functions to use with data from the Implicit Association Test
Cleaning and Visualizing Implicit Association Test (IAT) Data
Scoring Algorithm for the Implicit Association Test (IAT)
Compute Effect Sizes and Reliability for Implicit Association
Test (IAT) Data
Implicit Association Test Scores Using Robust Statistics
Plotting N-T Plane for Decision on Performing an Interim
Analysis
Data and Functions for "An Intro. to Accept. Samp. & SPC/R"
Item Based Collaborative Filtering for Multi-Trait and
Multi-Environment Data
Convert Between Different IBD-State Labelling Schemes
Functions for the Analysis of IBD Haplo output
Functions for the Analysis of IBD Haplo Output
Simulation of chromosomal regions shared by related individuals.
Simulation of chromosomal regions shared by family members.
Simulation of Chromosomal Regions Shared by Family Members
Individual Based Model Population Simulation
R API to Interactive Brokers Trader Workstation
Inequality and Concentration Indices and Curves
In-depth Characterization and Analysis of Mutational Signatures
('ICAMS')
In-Depth Characterization and Analysis of Mutational Signatures
('ICAMS')
Imperialist Competitive Algorithm for Optimal Designs
Optimal Designs for Linear and Nonlinear Models
Optimal Designs for Nonlinear Statistical Models by Imperialist
Competitive Algorithm (ICA)
Bayesian Semiparametric Models for Interval-Censored Data
Data-Driven Design of Targeted Gene Panels for Estimating
Immunotherapy Biomarkers
Functions facilitating the estimation of the Intraclass
Correlation Coefficient
Facilitating Estimation of the Intraclass Correlation
Coefficient
Calculation of Sample Size and Power for ICC
Facilitates Clustered Binary Data Generation, and Estimation of
Intracluster Correlation Coefficient (ICC) for Binary Data
Metadata Processing for the German Modification of the ICD-10
Coding System
Identification of Cancer Dysfunctional Subpathway by Integrating
DNA Methylation, Copy Number Variation, and Gene Expression
Data
Identification of Cancer Dysfunctional Subpathway with Omics
Data
Individual Conditional Expectation Plot Toolbox
Incremental Cost-Effectiveness (ICE) Statistical Inference (from Two Unbiased Samples)
Incremental Cost-Effectiveness (ICE) Statistical Inference from Two Unbiased Samples
Incremental Cost-Effectiveness (ICE) Statistical Inference from
Two Unbiased Samples
Incremental Cost-Effectiveness Inference on Two Unbiased Samples
Incremental Cost-Effectiveness Inference using Two Unbiased
Samples
Estimation of number of clusters and identification of atypical
units
Estimation of Number of Clusters and Identification of Atypical
Units
Fit Generalized Odds Rate Hazards Model with Interval Censored
Data
Data Analysis for ODS and Case-Cohort Designs with
Interval-Censoring
Provides Easy Access to Complex Systems Datasets
Simultaneous Confidence Intervals for Ranks
ICS / ICA Computation Based on two Scatter Matrices
Tools for Exploring Multivariate Data via ICS/ICA
Interval-Censored Sequence Kernel Association Test
Outlier Detection Using Invariant Coordinate Selection
Data Smoothing by Interpolating Cubic Splines
Indirect Cross-Validation (ICV) for Kernel Density Estimation
Cox Model with Interval-Censored Starting Time of a Covariate
An Ensemble Method for Interval-Censored Survival Data
Information Criteria for Generalized Linear Regression
Semiparametric Regression Analysis of Interval-Censored Data
A package for semiparametric regression analysis of
interval-censored data
Estimating and Testing the Number of Interesting Components in
Linear Dimension Reduction
Vector Fields from Spatial Time Series of Population Abundance
Update Chinese ID Card Number to Eighteen Digits
Convert Identifiers in Biological Databases
Agnostic, Idiomatic Data Filter Module for Shiny
Imprecise Dirichlet Process for Survival Analysis
Utilities from Institute of Data Analyses and Process Design, IDP/ZHW
Utilities from Institute of Data Analyses and Process Design (www.idp.zhwin.ch)
Utilities of Institute of Data Analyses and Process Design (www.idp.zhwin.ch)
Utilities of Institute of Data Analyses and Process Design (www.idp.zhaw.ch)
Utilities of Institute of Data Analyses and Process Design
(www.idp.zhaw.ch)
'Utilities of Institute of Data Analyses and Process Design
(www.zhaw.ch/idp)'
An Interactive Detector for Spatial Associations
Intelligent Peak Analyzer for LC-MS Data
Intrinsic Peak Analysis (IPA) for HRMS Data
Parser for mzML, mzXML, and netCDF Files (Mass Spectrometry
Data)
Ultimate Formula Annotation (UFA) for HRMS Data Processing
United Formula Annotation (UFA) for HRMS Data Processing
Exhaustive Chemical Enumeration for Ultimate Formula Annotation
Exhaustive Chemical Enumeration for United Formula Annotation
Estimate Global Clustering in Infectious Disease
Identify Turtles by their Plastral Biometries
Isolate-Detect Methodology for Multiple Change-Point Detection
Assessment of Individual Identity in Animal Signals
Robust Analysis for Absolute Abundance in Microbiome
Robust Inference for Absolute Abundance in Microbiome Analysis
Identifying functional polymorphisms in genetic association
studies
Draw Fractals using Iterated Function Systems and C++
Simulate Impact of Different Urban Policies Through a General
Equilibrium Model
A Shiny Interface for Simple Data Management
Analyzing Data Through of Percentage of Importance Indice
(Production Unknown) and Its Derivations
Datasets to Accompany Wolfe and Schneider - Intuitive
Introductory Statistics
Modeling Within Individual Variability as Predictor
Linear Regression Based on 'ILSE' for Missing Data
Integrated Methylation QTL Mapping and Allele-Specific Analysis
Index of Multiple Deprivation Data for the UK
R Interface for International Monetary Fund(IMF) Data API
Fitting, Diagnostics, and Plotting Functions for Infinite
Mixtures of Infinite Factor Analysers and Related Models
Infinite Mixtures of Infinite Factor Analysers and Related
Models
Gaussian Mixture Model for Multi-Omics Data Integration
Information Matrix Test for Generalized Partial Credit Models
Independent Multiple-Sample Greedy Equivalence Search
Implementation
Internal Control Analysis of Translatome Studies by Microarrays
Evaluation of Indicator Performances for Assessing Ecosystem
States
Quality Control of Climatological Daily Time Series
IN-vivo reSPonsE Classification of Tumours
Inferring Shared Modules from Multiple Gene Expression Datasets
with Partially Overlapping Gene Sets
Quantify and Control Reproducibility in High-Throughput
Experiments
Iterated Ordinary Least Squares Regression
Iterative Pruning to Capture Population Structure
Kendall's Tau Partial Corr. for Survival Trait and Biomarkers
Basic Functions to Check the Readability, Consistency, and
Content of an Individual Participant/Patient Data File from a
Randomised Controlled Trial
Basic Functions to Check Readability, Consistency, and Content
of an Individual Participant Data File
Map Digitized Survival Curves Back to Individual Patient Data
Data from the Integrated Post-Secondary Education Data System
Transforms Institutional Data into Text Files for IPEDS
Automated Import/Upload
Identification of Parental Lines via Genomic Prediction
Intervention in Prediction Measure (IPM) for Random Forests
Functions and Data for the Book 'Integrated Population Models'
Builds and analyses Integral Projection Models (IPMs).
Introduction to Probability and Statistics Using R
Inverse-Propensity-Weighting for Partially Nested Designs
Propensity Score Based Adjusted Survival Curves and
Corresponding Log-Rank Statistic
Convert IP Addresses to Country Names or Full Location with
Geoplotting
Identification and Quantification of Metabolites by Using 1D 1H
NMR FID
A R Interface for the Instantaneous RATEs (IRATE) Model
Classes and Methods for Seismic Data Analysis
Family of Bayesian EMM Algorithm for Item Response Models
Parameter Estimation of Item Response Theory with Estimation of
Latent Distribution
Estimating IRT Parameters using the IRT Methodology
Collection of Practical Institutional Research Examples and
Tutorials
Native R Kernel for the 'Jupyter Notebook'
INTRODUZIONE ALLA STATISTICA APPLICATA con esempi in R
Extract Cell Density and Nearest Distance Based on 'PerkinElmer
InForm' Software Output
Iterative Selection of Blocks of Features - ISBF
Converts ISCO-08 to Job Prestige Scores, ISCO-88 and Job Name
Ion Selective Electrodes Analysis Methods
Data for An Introduction to Statistical Learning with
Applications in R
Data for an Introduction to Statistical Learning with
Applications in R
Introduction to Statistical Learning, Second Edition
Week of the year and weekday according to ISO 8601
The Iterated Score Regression-Based Estimation Algorithm
Tools and Data for the International Soil Radiocarbon Database
Data sets for Introductory Statistics with R
Analysis of the International Trade Network
Statistical Learning for Individualized Treatment Regime
Variable Selection for Optimal Individualized Dynamic Treatment
Regime
Incorporating Uncertainties in Propensity Scores
Produces an IVY Plot (Similar to Dot Plot) with/without
Frequencies
Synthesizing Information Across Collaborating Research
Iboot: iterated bootstrap tests and confidence sets.
Apply Statistical Post-Processing to Improve Sea Ice Predictions
Score Taxon-Level IgA Binding in IgA-Seq Experiments
Read binary files saved by Igor Pro (including Neuromatic data)
Read Binary Files Saved by 'Igor Pro' (Including 'Neuromatic'
Data)
Facilitates image analysis for social scientists.
Delimit and Characterize Color Phenotype of the Pearl Oyster
Iterative Max-Min Entropy Margin-Maximization with Interaction
Terms for Feature Selection
Calculation and Visualization of the Impact Effect Size Measure
Identifying Causal Effect for Multi-Component Intervention Using
Instrumental Variable Method
Analyzing Data Through of Percentage of Importance Indice and
Its Derivations
Robust Multiple Imputation with Generalized Additive Models for
Location Scale and Shape
Obtaining and Estimating Unidimensional IRT Dual Models
Obtaining and Estimating Unidimensional and Multidimensional IRT
Dual Models
Probabilistic Verbal Autopsy Coding with InSilicoVA
Probabilistic Verbal Autopsy Coding with 'InSilicoVA' Algorithm
Incremental Calculation of Dynamic Time Warping
Comparison of Means for the Incomplete Paired Data
Dose Response Curves from Incucyte Proliferation Assays
Tests of Independence Between Point Processes in Time
Tests of Independence and Analysis of Dependence Between Point
Processes in Time
Nonparametric Independence Tests Based on Entropy Estimation
Nonparametric tests of independence between random vectors.
Non-Parametric Tests of Independence Between Random Vectors
Infine-dimensional model (IDM) to analyse phenotypic variation
in growth trajectories.
Functiont that simulates an epidemic in a network of contacts.
Inference About the Standardized Mortality Ratio when Evaluating
the Effect of a Screening Program on Survival
Inference about the standardized mortality ratio when evaluating
the effect of a screening program on survival.
Estimate and Account for Tumor Purity in Cancer Methylation Data
Analysis
Melt Curve Fitting and Melt Shift Analysis
Calculates the Probability of Informed Trading (PIN)
Data Exploration with Information Theory (Weight-of-Evidence and
Information Value)
Performance Analysis and Companion Functions for Binary
Classification Problems
Performance Analysis and Companion Functions for Accuracy
Improvement for Binary Classification Problems
Performance Analysis and Companion Functions for Binary
Classification Models
Multiple Imputation for Informative Censoring
Translate ICD-9 into Injury Severity Score
High-Dimensional Changepoint Estimation via Sparse Projection
Integration of Multiple Data Sets with Clustering Techniques
Integration of Omics Data Using Linear Modeling
Numerical Integration for Integrated Likelihood
Integrative Clustering of Multiple Genomic Dataset
Joint Modelling of the Gene-Expression and Bioassay Data, Taking
Care of the Effect Due to a Fingerprint Feature
Joint Modeling of the Gene-Expression and Bioassay Data, Taking
Care of the Effect Due to a Fingerprint Feature
Integrated Prediction using Univariate and Multivariate Random
Forests
Integrated Prediction using Uni-Variate and Multivariate Random
Forests
Simulation of Inter-Related Genomic Datasets
Tests for marginal interactions in a 2 class response model
Power Analyses for Interaction Effects in Cross-Sectional
Regressions
interactive network analysis and visualization.
Compute Chi-Square Measures with Corrections
GUI to Analyse qPCR Results after PMA Treatment or not
Hourly interpolation of multiple temperature daily series
Interpreting High Resolution GC-APCI-MS Spectra
Interpreting High Resolution Mass Spectra
Tools to Deal with Interval-Valued Responses in Questionnaires
Inverse Stable Prior for Widely-Used Exponential Models
Irish Companies' Boards from 2003 to 2013
A Dynamic Bipartite Latent Space Model to Analyse Irish
Companies' Boards from 2003 to 2013
Analysis of Longitudinal Data with Irregular Observation Times
Proper Scoring Rules for Missing Value Imputation
Fitting Ising models using the eLasso method
Fitting Ising Models Using the ELasso Method
Sampling methods and distribution functions for the Ising model
Sampling Methods and Distribution Functions for the Ising Model
Functions to perform isotonic regression.
Functions to Perform Isotonic Regression
Transformed and bootstrap confidence intervals for current
status data
Confidence intervals for current status data based on
transformations and bootstrap.
Isomorphism Check for Multi-Stage Factorial Designs with
Randomization Restrictions
Correcting Drift and Carry-over in Continuous Isotopic
Measurements
Testing for monotonic relationship between gene expression and
doses in a microarray experiment.
Order-Restricted Inference for Microarray Experiments
Retrieve Data using the Max Plank Institute 'IsoMemo' API
Statistical Toolbox for Radiometric Geochronology
Isoscape Computation and Inference of Spatial Origins using
Mixed Models
IR-Tree Modeling in 'mirt', 'Mplus', or 'TAM'
Iterative Hard Thresholding Extensions to Cyclops
Framework for Tick Population and Infection Modeling
Create 'Java' Objects and Execute 'Java' Methods
JADE and other BSS methods as well as some BSS performance
criteria
Blind Source Separation Methods Based on Joint Diagonalization
and Some BSS Performance Criteria
Joint Analysis of Genotype and Group-specific Variability Using
a Novel Score Test Approach to Map eQTL
Joint Analysis of Genotype and Group-Specific Variability Using
a Novel Score Test Approach to Map eQTL
Joint Analysis of Genotype and Group-Specific Variability Using
a Novel Score Test Approach to Map Expression Quantitative
Trait Loci (eQTL)
R modules for JASPAR databases: a collection of transcription
factor DNA-binding preferences, modeled as matrices.
A Metadata and Text Extraction and Manipulation Tool Set
Misc Small Tools and Helper Functions for Other Code of J.
Buttlar
An R Interface to the JBrowse 2 Genome Browser
Journal Citation Reports ('JCR') Impact Factor by 'Clarivate'
'Analytics'
A Menu-Driven GUI for Analyzing and Modelling Data of Just
Finance and Econometrics
A Menu-Driven GUI for Data Analysis of Just Finance and
Econometrics
A Menu-Driven GUI for Analyzing Data of Just Finance and
Econometrics
Tools and GUI for Analyzing Data of Just Finance and
Econometrics
Tools and GUI for Analyzing Time Series Data of Just Finance and
Econometrics
Rock Mass Structural Analysis from 3D Mesh of Point Cloud
Joint Generalized Estimating Equation Solver
Performs the Joint Graphical Lasso for sparse inverse covariance
estimation on multiple classes
Performs the Joint Graphical Lasso for Sparse Inverse Covariance
Estimation on Multiple Classes
Calculates polychorical correlations for several copula
families.
Nonparametric Estimation of Homothetic and Generalized Homothetic Production Functions
Joint Modelling of Longitudinal and Survival Data
Joint Modeling of Longitudinal and Survival Data
Joint Modeling of Longitudinal and Survival Data - Power
Calculation
Joint Modeling of Longitudinal and Time-to-Event Data under a
Bayesian Approach
Extended Joint Models for Longitudinal and Time-to-Event Data
Joint Models for Longitudinal Measurements and Competing Risks
Failure Time Data
Joint Models for Longitudinal and Competing Risks Data
Implements Under/Oversampling for Probability Estimation
Covariance and Inverse Covariance Matrix Estimation Using Joint
Penalty
Methods for population-based cancer survival analysis
Jump Q-Learning for Individualized Interval-Valued Dose Rule
Joint Random Forest (JRF) for the Simultaneous Estimation of
Multiple Related Networks
Semiparametric Joint Modeling of Survival and Longitudinal Data
Estimate Parameters of the Best-Fitting JohnsonSU Distribution
A 'RStudio' Addin to Send 'JavaScript' Code to the 'V8' Console
Mediation Analysis Using Joint Significance
Joint Sparse Optimization via Proximal Gradient Method for Cell
Fate Conversion
Jaya, a Gradient-Free Optimization Algorithm
Monte Carlo Option Pricing Algorithm for Jump Diffusion Model
with Correlation Companies
Monte Carlo Option Pricing Algorithm for Jump Diffusion Models
with Correlational Companies
Monte Carlo Option Pricing Algorithms for Jump Diffusion Models
with Correlational Companies
Modelling and Simulating Judgments of Frequency
Functions for unit-level small area estimators and their
variances
Functions for some unit-level small area estimators and their
variances
Functions for some Unit-Level Small Area Estimators and their
Variances
Unit-Level and Area-Level Small Area Estimation
Joint Analysis and Imputation of Incomplete Data
Joint Modelling of Mean and Dispersion (outdated, see package JointModeling)
Semiparametric Joint Models for Longitudinal and Counting
Processes
Sparse Gaussian Graphical Model Estimation, Visualization and
Evaluation
End-to-End Sparse Gaussian Graphical Model Simulation,
Estimation, Visualization, Evaluation and Application
Joint Modelling of Mixed Correlated Binary and Continuous
Responses : A Latent Variable Approach
JudgeIt: A Program for Evaluating Electoral Systems and
Redistricting Plans
Seamless Integration Between R and 'Julia'
A Functionally Oriented Interface for Integrating 'Julia' with R
Importing and Working with Track and Field Data
Justifying Alpha Levels for Hypothesis Tests
Package to identify and sort genes overexpressed
Kinetic analysis and visualization of DCE-MRI data.
Kinetic Analysis and Visualization of DCE-MRI Data
Kernel-Smoothed Nonparametric Methods for Environmental Exposure
Data Subject to Detection Limits
Expectile Regression in Reproducing Kernel Hilbert Space
Multivariate Kalman filter and smoother, simulation smoother and
forecasting
Multivariate Kalman filter and smoother, simulation smoother and
forecasting of gaussian state space models. Approximate
likelihood of linear non-gaussian state space models.
Multivariate Kalman filter and smoother, simulation smoother and
forecasting of state space models. Approximate likelihood of
linear non-gaussian state space models.
Multivariate Kalman filter and smoother, simulation smoother and
forecasting of state space models. State smoothing and
approximate likelihood of exponential family state space
models.
Kalman filter and smoothers for exponential family state space
models.
Kalman Filter and Smoother for Exponential Family State Space
Models.
Kalman Filter and Smoother for Exponential Family State Space
Models
Kalman Filter, Smoother and Disturbance Smoother
Kendall Functional Principal Component Analysis
Kernel Based Gradient Matching for Parameter Inference in
Ordinary Differential Equations
Methods for Calculating 'KHQ' Scores and 'KHQ5D' Utility Index
Scores
Kernel Measure of Multi-Sample Dissimilarity
Gene-Based Association Analysis for Complex Traits
Data sets from Klein and Moeschberger (1997), Survival Analysis
Interactive Document for Working with KNN Analysis
Knowledge discovery by accuracy maximization
Knowledge Discovery by Accuracy Maximization
Functional Summary and Meta-Analysis of Gene Expression Data
KONP Tests: Powerful K-Sample Tests for Right-Censored Data
Keen and Reliable Interface Subroutines for Bioinformatic
Analysis
Kernel-based Regularized Least Squares (KRLS)
Kernel-based Regularized Least squares (KRLS)
Retained Component Criterion for Principal Component Analysis
Goodness-of-Fit Tests using Kernelized Stein Discrepancy
Computing P-Values of the K-S Test for (Dis)Continuous Null
Distribution
Co-Tucker3 Analysis of Two Sequences of Matrices
An R-Shiny Application for Calculating Cohen's and Fleiss' Kappa
Calculates "vectorial Kappa", an index of congruence between
patchy mosaics.
An Interface for Microclimate Time Series
An Interface for Microclimate Time Series Analysis
Khattree-Bahuguna's Univariate and Multivariate Skewness
Smooth Test for Equality of Copulas and Clustering Multivariate
Knowledge Synthesis in Agriculture - From Experimental Network
to Meta-Analysis
Kendall rank correlation and Mann-Kendall trend test
Kendall Rank Correlation and Mann-Kendall Trend Test
Functions for kernel smoothing for Wand & Jones (1995)
Functions for kernel smoothing for Wand &Jones (1995)
Functions for Kernel Smoothing Supporting Wand & Jones (1995)
Kernel Density Estimation for Heaped Data
Kernel Density Estimation for Heaped and Rounded Data
Bayesian Designs for Early Phase Clinical Trials
Keyboard and Mouse Input Simulation for Windows OS
Miscellaneous functions to improve R coding experience
Miscellaneous functions intended to improve the R coding
experience
Generate Feasible Samples of a Knapsack Problem
Whole-Genome Sequencing Data Analysis via Knockoff Statistics
Trio Data Analysis with Knockoff Statistics for FDR Control
Discriminating Well Surveyed Spatial Units from Exhaustive
Biodiversity Databases
Knowledge-Based Guided Regularized Random Forest
Koul's Minimum Distance Estimation in Linear Regression and
Autoregression Model
Koul's Minimum Distance Estimation in Linear Regression and
Autoregression Model by Coordinate Descent Algorithm
Koul's Minimum Distance Estimation in Regression and Image
Segmentation Problems
Cubic Spline Fitting with Knot Selection
A Quantified Implementation of the Kraljic Matrix
Kriging-based Inversion for Deterministic and Noisy Computer
Experiments
Kriging-Based Inversion for Deterministic and Noisy Computer
Experiments
Check the power of seveal statistical models.
Fast Algorithms for Best Subset Selection
Robust Structured Regression via the L2 Criterion
Interface to the Lake Multi-Scaled Geospatial and Temporal
Database
Liquid Association for Network Dynamics Detection
LARF: Local Average Response Functions for Estimating Treatment
Effects
Local Average Response Functions for Instrumental Variable
Estimation of Treatment Effects
Leaf Area Determination from Visual Image
Estimation of Lifetime Attributable Risk of Cancer from
Radiation Exposure
Latent (Variable) Analysis with Bayesian Learning
Logistic Bayesian Lasso for Rare (or Common) Haplotype
Association
The Length-Biased Power Garima Distribution
Latent Class Analysis (LCA) with familial dependence in extended
pedigrees
Latent Class Analysis (LCA) with Familial Dependence in Extended
Pedigrees
Variable Selection for Latent Class Analysis
Data sets for package ``LMERConvenienceFunctions''
A Tool for Selecting Genes Related to Survival Outcomes using
Longitudinal Gene Expression Data
Biplot Graphical Interface for LDA Models
User-Friendly Interface for Review of Scientific Literature
Latent Dirichlet Allocation Coupled with Time Series Analyses
Linkage Disequilibrium of Ancestry (LDA) and LDA Score (LDAS)
Interactive Visualization of Topic Models
Calculate and Predict the Low Density Lipoprotein Values
Finding Locally D-optimal optimal designs for some nonlinear and
generalized linear models.
Linkage disequilibrium corrected by the structure and the
relatedness
Linkage Disequilibrium Corrected by the Structure and the
Relatedness
Link Function and Distribution Diagnostic Test for Social
Science Researchers
Plots measures of pairwise linkage disequilibria for SNPs
A graphical tool for exploring pairwise linkage disequilibria between Single Nucleotide Polymorphisms (SNPs)
This package produces a pairwise LD plot
Graphical display of pairwise linkage disequilibria between SNPs
Graphical Display of Pairwise Linkage Disequilibria Between SNPs
An R Package for Calculating Linkage Disequilibrium
Calculating Linkage Disequilibrium (LD) in Human Population
Groups of Interest
Exact tests for Linkage Disequilibrium and Hardy-Weinberg Equilibrium
Finds "Local Subnetworks" Within an Interaction Network which
Show Enrichment for Differentially Expressed Genes
Constructing Gene Co-Expression Networks for Single-Cell
RNA-Sequencing Data Using Pseudotime Ordering
Likelihood Estimation of Admixture in Parents From Offspring
Genotypes
Latent Environmental & Genetic InTeraction (LEGIT) Model
Estimation of the Local False Discovery Rates by Type II Maximum
Likelihood Estimation
Estimating Local False Discovery Rates Using the Method of
Moments
Estimating Local False Discovery Rates Using Empirical Bayes
Methods
Tests for Genetic Association/Gene-Environment Interaction in
Longitudinal Gene-Environment-Wide Interaction Studies
Tests for Genetic Association/Gene-Environment Interaction in
Longitudinal Studies
Set-Based Tests for Genetic Association in Longitudinal Studies
simulating Linkage Group Selection (LGS)
Latin Hypercube Designs (LHDs) Algorithms
The LIC Criterion for Optimal Subset Selection
Light Cone Reconstruction of States - Predictive State
Estimation From Spatio-Temporal Data
Sensitivity Analysis for Case Weight in Normal Linear Regression
Linear Inverse Model examples and solution methods.
Linear Inverse Model Examples and Solution Methods
Longest Increasing Subsequence Independence Test
Tests of independence based on the Longest Increasing
Subsequence
Hierarchical clustering of variables or objects based on the likelihood linkage analysis method
Hierarchical clustering of variables or objects based on the
likelihood linkage analysis method
Logit Leaf Model Classifier for Binary Classification
Data Analysis of Liquid-Liquid Systems using R
Decomposes a set of variables into cliques and separators.
A Self-Adaptive Approach for Demodulating Multi-Component Signal
An assortment of functions to facilitate modeling with linear
mixed-effects regression (LMER).
A suite of functions to back-fit fixed effects and forward-fit
random effects.
A suite of functions to back-fit fixed effects and forward-fit
random effects, as well as other miscellaneous functions.
Model Selection and Post-hoc Analysis for (G)LMER Models
Model Selection and Post-Hoc Analysis for (G)LMER Models
LMGene Software for Date Transformation and Identification
of Differentially Expressed Genes in Gene Expression Arrays
LMGene Software for Date Transformation and Identification of
Differentially Expressed Genes in Gene Expression Arrays
LMGene Software for Data Transformation and Identification of
Differentially Expressed Genes in Gene Expression Arrays
Fit Latent Multivariate Mixed Effects Location Scale Models
Repeated Measurement Models for Discrete Times
Inference for Linear Models with Nuisance Parameters
Fit Latent Markov models in basic versions
Latent Markov Models with and without Covariates
Filter Methods for Parameter Estimation in Linear Regression
Models
Filter Methods for Parameter Estimation in Linear and Non Linear
Regression Models
Advanced L-Moment Fitting of Distributions
Simultaneous CIs for Ratios of Means of Log-Normal Populations
with Zeros
LogNormal Response Time Item Response Theory Models
Low-Rank Decomposition of Brain Connectivity Matrices with
Uniform Sparsity
Log File Analysis in International Large-Scale Assessments
Tree-Based Models for the Analysis of Log Files from
Computer-Based Assessments
LOGICOIL: multi-state prediction of coiled-coil oligomeric
state.
Functions, Data and Code for Binary and Binomial Data
Missing morphometric data simulation and estimation
Missing Morphometric Data Simulation and Estimation
Detecting New Signals under Background Mismodelling
Nonparametric Smoothing of Laplacian Graph Spectra
LP Nonparametric High Dimension K-Sample Comparison
LP Nonparametric High Dimensional K-Sample Comparison
Linear Parametric Models Applied to Hydrological Series
Linear Predictor Score, for Binary Inference from Multiple
Continuous Variables
Linear Predictor Score, for binary inference from multiple
continuous variables.
Learned Pattern Similarity and Representation for Time Series
LP Nonparametric Approach to Non-Gaussian Non-Linear Time Series
Modelling
Lag Penalized Weighted Correlation for Time Series Clustering
Merging linkage maps by linear programming
Merging Linkage Maps by Linear Programming
Calculates Power, Sample Size, or Detectable Effect for
Longitudinal Analyses
Estimate and Test Exponential vs. Pareto Distributions
Low Rank Matrix Factorization S3 Objects
Fitting Linear Quantile Regression Mixed Models
Fitting Linear Quantile Regression Mixed Models with
Relationship Matrix
A Likelihood Ratio Test Accounting for Genetic Heterogeneity
Likelihood Ratio Tests and Confidence Intervals
Dose Response Signal Detection under Model Uncertainty
Locally stationary two-dimensional wavelet process estimation
scheme
Locally Stationary Two-Dimensional Wavelet Process Estimation
Scheme
A Multiscale Test of Spatial Stationarity for LS2W processes
A Multiscale Test of Spatial Stationarity for LS2W Processes
Applied Latent Semantic Analysis (LSA) functions
Applied Latent Semantic Analysis (LSA) Functions
Datensätze und Übungsmaterial zu Schreiner und Breit (2016);
beta-version
Datensätze und Übungsmaterial zu 'Large-Scale Assessment mit R'
Daten, Beispiele und Funktionen zu 'Large-Scale Assessment mit
R'
Local Statistical Complexity - Automatic Pattern Discovery in
Spatio-Temporal Data
Interface Tools for LSD Simulation Results Files
Sensitivity Analysis Tools for LSD Simulations
Constrained Least Squares and Generalized QR Factorization
Value American and Real Options Through LSM Simulation
American options pricing with Least Squares Monte Carlo method
Lysate and Secretome Peptide Feature Plotter
Land Surface Temperature Retrieval for Landsat 8
Estimation of Low Rank Plus Sparse Structured Vector
Auto-Regressive (VAR) Model
Simulation and Spectral Estimation of Locally Stationary Wavelet
Packet Processes
Model for Semisupervised Text Analysis Based on Word Embeddings
Semisupervised Document Scaling by Word-Embedding Models
Semisupervised Document Scaling with Word-Embedding Models
Functions to Replicate the Center for Disease Control and
Prevention's 'LTAS' Software in R
LTPD plans for sampling inspection by variables
LTPD and AOQL plans for acceptance sampling inspection by
variables
LTPD and AOQL Plans for Acceptance Sampling Inspection by
Variables
Ensemble Methods for Survival Data with Time-Varying Covariates
Survival Trees to Fit Left-Truncated and Right-Censored Survival
Data
Survival Trees to Fit Left-Truncated and Right-Censored and
Interval-Censored Survival Data
Latent Unknown Clustering with Integrated Data
Latent Unknown Clustering Integrating Multi-View Data
Latent Variable Gaussian Process Modeling with Qualitative and
Quantitative Input Variables
A Latent Variable Model for Mixed Continuous and Ordinal
Responses
An Automated Approach to Evaluating Dose-Effect Experiments
Following Litchfield and Wilcoxon (1949)
Simulate Evapotranspiration and Soil Moisture with the SVAT
Model LWF-Brook90
Exact Spike Train Inference via L0 Optimization
Miscellaneous Scripts from the Data Science Laboratory (UCPH)
Identification, Tuning, Visualisation and Analysis of Labour
Market Areas
Routines for Fit, Inference and Diagnostics in LAD Models
Tools for the analysis of ecosystem metabolism
Tools for the Analysis of Ecosystem Metabolism
Estimation techniques for the reliability estimate: Maximized
Lambda4
Estimation techniques for the reliability estimate: Maximized
Lambda4.
Collection of Internal Consistency Reliability Coefficients.
Lambert W parameter estimation, plots, simulation (Skew
Analysis)
Lambert W parameter estimation, plots, simulation (Analysis of
skewed data)
Analysis of skewed data by Lambert W random variables.
Gaussianize and analyze skewed, heavy-tailed data
Analyze and Gaussianize skewed, heavy-tailed data
Analyze and Gaussianize Heavy-Tailed, Skewed Data
Analyze and Gaussianize heavy-tailed, skewed data
Probabilistic Models to Analyze and Gaussianize Heavy-Tailed,
Skewed Data
Langevin Analysis in One and Two Dimensions
Laplace Deconvolution with Noisy Discrete Non-Equally Spaced
Observations on a Finite Time Interval
Laplace's Demon: Software for Bayesian Inference
Complete Environment for Bayesian Inference
Modelling Interactions in High-Dimensional Data with
Backtracking
High-Dimensional Lasso Generalized Estimating Equations
Sparsed Sliced Inverse Regression via Lasso
Item Response Theory Implemented in R and Cpp
Functions to calculate common laterality statistics in
primatology.
Functions to Calculate Common Laterality Statistics in
Primatology
Multiresolution Kriging based on Markov random fields
Multiresolution Kriging Based on Markov Random Fields
Multi-Resolution Kriging Based on Markov Random Fields
Lava Estimation for the Sum of Sparse and Dense Signals(3
Methods)
Lava Estimation for the Sum of Sparse and Dense Signals
Border and Area Estimation of Data Measured with Additive Error
Functions and datasets to accompany the book "Le logiciel R:
Maitriser le langage, Effectuer des analyses statistiques"
(french)
Functions and datasets to accompany the book "Le logiciel R:
Maitriser le langage, Effectuer des analyses statistiques"
(French)
Length-Based Multispecies Analysis by Numerical Simulation
Fits, plots, and summarizes leaf angle distributions.
Analysis and Visualization of Plant Leaf Angle Distributions
A Rapid Digital Image Analysis for Leaf Area
Rapid Digital Image Analysis of Leaf Area
Functions for Learning Bayesian Inference
Functions for Learning Exploratory Data Analysis
Functions, Data Sets and Vignettes to Aid in Learning Principal
Components Analysis (PCA)
Elemental Descriptive and Inferential Statistics
Find Related Items and Lexical Dimensions in a Lexicon
Plot Lexis Diagrams for Demographic Purposes
Design of Optimum-Path Forest Classifiers
Linear Predictive Models Based On The Liblinear C/C++ Library.
Linear Predictive Models Based On The liblinear C/C++ Library.
Linear Predictive Models Based on the LIBLINEAR C/C++ Library
Linear Predictive Models Based on the 'LIBLINEAR' C/C++ Library
Linear Classification with Online Adaptation of Coordinate
Frequencies
Linearized Bregman Algorithms for Generalized Linear Models
Framework for Traditional Life Insurance Contracts
A package to implement HMD model life table system
Two-Parameter HMD Model Life Table System
Tools for Communication with Lightning-Viz Server
For Implementation of Feed Reduction, Learning Examples and Code
Management
For Implementation of Feed Reduction, Learning Examples, NLP and
Code Management
Static Univariate Frequentist and Bayesian Linear Calibration
Interactive Interpretation of Linear Regression Models
Functions to Explore L-Systems (Lindenmayer Systems)
The Lindley Distribution and Its Modifications
Change Point Detection in High-Dimensional Linear Regression
Models
Minimum Distance Estimation in Linear Regression Model
Clustering Communication Networks Using the Stochastic Topic
Block Model Through Linkage.fr
Plot Linkage Group Maps with Quantitative Trait Loci
Linked Emulator of a Coupled System of Simulators
Lipid Annotation for LC-MS/MS using Data Independent Acquisition
Lipid Annotation for LC-MS/MS DDA or DIA Data
Long Non-Coding RNA Identification Based on Features of
Sequence, EIIP and Secondary Structure
LncRNA Identification and Analysis Using Heterologous Features
Predicting Modulator and Functional/Survival Analysis
Identifying the Pathways Regulated by LncRNA Sets of Interest
Prioritizing Candidate LncRNAs Based on a Composite Multi-Level
Network
Generalized Spline Mixed Effect Models for Longitudinal Breath
Data
Functions for Performing Local FDR Estimation when Null and
Alternative are Poisson
Locally Sparse Estimator of Generalized Varying Coefficient
Model for Asynchronous Longitudinal Data
Local Control: An R Package for Generating High Quality
Comparative Effectiveness Evidence
Nonparametric Methods for Generating High Quality Comparative
Effectiveness Evidence
Local Control Strategy for Robust Analysis of Cross-Sectional
Data
Local Control Strategy for Analysis of Cross-Sectional Data
Datasets for "Statistics: UnLocking the Power of Data"
Datasets for 'Statistics: Unlocking the Power of Data'
Maximum likelihood estimation of a log-concave density
Log-concave Density Estimation in Arbitrary Dimensions
Log-Concave Density Estimation in Arbitrary Dimensions
Diagnostic tests for logistic regression models
Diagnostic Tests for Models with a Binomial Response
Diagnostic Tests for Logistic Regression Models
Linear and Logistic Regression-Based Reliable Change Index
Infer network based on binary arrays using regularized logistic
regression
Logrank Test for Aggregated Survival Data
Recursive Partitioning for Longitudinal Profiles Using Baseline
Covariates
Recursive Partitioning for Longitudinal Data and Right Censored
Data Using Baseline Covariates
A Tool for 'Confounder'-Sensitive Longitudinal Analysis on
'Multi-omics' Data
A Tool for 'Covariate'-Sensitive Longitudinal Analysis on
'omics' Data
A collection of tools to conduct Levins' Loop Analysis
A Collection of Tools to Conduct Levins' Loop Analysis
Comprehensive Feedback Loop Detection in ODE Models
Integration and Analysis of Chromatin Loop Data
Runs Lotka's Law which is One of the Special Applications of
Zipf's Law
Robust Group Variable Screening Based on Maximum Lq-Likelihood
Estimation
Package for Luminescence Dating data analysis
Comprehensive Luminescence Dating Data Analysis
Comprehensive Luminescence Dating Data Analysis [upcoming]
Multi-Modal Similarity Matrix Factorization for Integrative
Multi-Omics Data Analysis
Multi-Modal Similarity Matrix Joint Factorization
Data from the M4 Time Series Forecasting Competition
Analysis of Alternative Polyadenylation Using 3' End-Linked
Reads
Multi-Armed Bayesian Ordinal Utility-Based Sequential Trial
Molecular Acquisition, Cleaning, and Evaluation in R 'MACER'
This package provides some basic methods for meta-analysis
MHC Allele-Based Differencing Between Populations
Create an HTML Dashboard to Visualize Data from MAF File
Mixed Model Association Test for GEne-Environment Interaction
A Pipeline for Meta-Genome Wide Association
Multiple Approximate Kernel Learning (MAKL)
Quantitative analysis of MALDI-TOF MS data
Quantitative Analysis of Mass Spectrometric Data
Quantitative Analysis of Mass Spectrometry Data
MALDI Mass Spectrometry Data Robust Pre-Processing and Analysis
Calculation of Minimum Averaged Mean Squared Error (MAMSE) weights.
Calculation of Minimum Averaged Mean Squared Error (MAMSE)
weights.
Calculation of Minimum Averaged Mean Squared Error (MAMSE)
Weights
Matrix Analysis and Normalization by Concordant Information
Enhancement
Analysis of Multivariate Data and Repeated Measures Designs
Resampling-Based Analysis of Multivariate Data and Repeated
Measures Designs
Multivariate Autoregressive Modeling for Analysis of Community
Time-Series Data
Revealing Splicing Dynamics at Single-Cell Resolution
Simulation, Estimation and Selection of MARX Models
Simulation, Estimation, Model Selection and Forecasting for MARX
Models
Main Package of Venables and Ripley's MASS
Support Functions and Datasets for Venables and Ripley's MASS
Body Mass Estimation Equations for Vertebrates
Model-Averaged Tail Area Wald (MATA-Wald) Confidence Interval
Model-Averaged Tail Area (MATA) Confidence Interval and
Distribution
Modern Calibration Functions for the Modern Analog Technique
(MAT)
Ordinary least square test and Multivariate Analysis Of Variance
test with n contrasts
Three methods to identify differentially expressed gene sets,
ordinary least square test, Multivariate Analysis Of Variance
test with n contrasts and Random forest.
Class prediction based on microarray data and clinical parameters
Class prediction based on microarray data and clinical
parameters
Tools for Normalizing and Comparing ChIP-seq Samples
Multiblock Exploratory and Predictive Data Analysis
Multivariate Bias Correction of Climate Model Outputs
Companion Package for the Book "Model-Based Clustering and
Classification for Data Science" by Bouveyron et al. (2019,
ISBN:9781108644181).
Methods for the Behavioral, Educational, and Social Sciences
Spatial Designs for Ecological and Environmental Surveys
Run Time-Course Model-Based Network Meta-Analysis (MBNMA) Models
Multivariate Bayesian Sparse Group Selection with Spike and Slab
Multivariate Bayesian Model with Shrinkage Priors
Access Data from the Massachusetts Bay Transit Authority (MBTA)
Web API
Nucleic Acid Melting Curve Analysis on Microbead Surfaces with R
Translates information from netcdf files with MC2 output into
inter-PVT transitions.
Optimal Nonparametric Testing of Missing Completely at Random
Monte Carlo Simulation for Surface Backscattering
Functions to Support the Multicriteria Decision Aiding Process
Support for the Multicriteria Decision Aiding Process
Functions to support the Multicriteria Decision Aiding process
Multi-Criteria Decision Making Methods for Crisp Data
Multiplicative Competitive Interaction (MCI) Model
Market Area Models for Retail and Service Locations
Estimating the Minimal Clinically Important Difference
Simultaneous Estimation of the Regression Coefficients and
Precision Matrix
Estimating and Testing Intergenerational Social Mobility Effect
Bayesian Analysis of Multivariate Counts Data in DNA
Metabarcoding and Ecology
Bayesian analysis of multivariate counts data
Posterior Distribution of Extreme Value Models in R
Hybrid Markov chain Monte Carlo using Gaussian Processes
Hybrid Markov Chain Monte Carlo using Gaussian Processes
Precision of Discrete Parameters in Transdimensional MCMC
Prepare MCMCtree Analyses and Plot Bayesian Divergence Time
Analyses Estimates on Trees
Tools to Visualize, Manipulate, and Summarize MCMC Output
Multiple comparisons using normal approximation
Multiple Comparisons Using Normal Approximation
Design and Analysis of Dose-Finding Studies
Design and Analysis of Dose-Finding Studies (see also
DoseFinding package)
A Supplement to the 'DoseFinding' Package for the General Case
Simulation-Based Design and Analysis of Dose-Finding Trials
A Monte Carlo permutation method for multiple test correlation
in case-control association study
A Monte Carlo permutation method for multiple test correlation
in case/control association study
A Monte Carlo permutation method for multiple test correlation
Determine the Optimal Number of Clusters
Multivariate Cumulative Sum (MCUSUM) Control Chart
Monte Carlo hypothesis tests with Sequential Stopping
Monte Carlo Hypothesis Tests with Sequential Stopping
Conjoint Analysis through Averaging of Multiple Analyses
Molecular Detection Mapping and Analysis Platform
Inference of Quadratic Functional for Moderate-Dimensional OLS
Detect gene-gene interactions using multifactor dimensionality
reduction
High Density Genetic Linkage Mapping using Multidimensional
Scaling
Interactive Document for Working with Multidimensional Scaling
and Principal Component Analysis
Multi-Dimensional MA Normalization for Plate Effect
Mixtures of Exponential-Distance Models with Covariates
Multiscale Clustering of Geometrical Network
Data sets from Mixed-effects Models in S
Data Sets from Mixed-Effects Models in S
Creation of Empirical Density Functions Based on Multivariate
Data
Performing Monte Carlo Expectation Maximization Random Forest
Imputation for Biological Data
Multivariate Exponentially Weighted Moving Average (MEWMA)
Control Chart
Fits the Mixture of Experts Latent Position Cluster Model to
Network Data
Fitting the Mixture of Experts Latent Position Cluster Model to
Network Data
Fit the Mixture of Experts Latent Position Cluster Model to
Network Data
A Homogeneity Test under the Presence of Measurement Errors
Model-Free Knockoff Filter for Controlled Variable Selection
Maximal Fat Oxidation and Kinetics Calculation
Multivariate Functional Principal Component Analysis for Data
Observed on Different Dimensional Domains
Creation and Evaluation of Multilevel Fixed and Sequential
Sampling Plans
Moder-Free Sure Independent Screening Procedures
The Multiple Filter Test for Change Point Detection
Structural Pursuit Over Multiple Undirected Graphs
Multivariate Response Generalized Linear Models
Missingness Aware Gaussian Mixture Models
API Client for the MG-RAST Server of the US DOE KBase
Analysis of MHC Data in Non-Model Species
Tests Controlling the FDR / FWER under Certain Copula Models
Multiple Hypotheses Testing for Discrete Data
Multiple Hypotheses Testing for Multiple Families/Groups
Structure
Bayesian Model Selection in Logistic Regression for the
Detection of Adverse Drug Reactions
General Markov Chain Monte Carlo for Bayesian Inference using
adaptive Metropolis-Hastings sampling
A Modular, Integrated Approach to Maximum Entropy Distribution
Modeling
The Computing of Monotonic Spline Bases and Constrained
Least-Squares Estimates
Microcluster-Based Detector of Anomalies in Edge Streams
Nearly Exact Sample Size Calculation for Exact Powerful
Nonrandomized Tests for Differences Between Binomial
Proportions
Multiple Imputation for interval censored data regression
Data Augmentation and Multiple Imputation for Interval Censored
Data
Multiple Imputation for Interval Censored Data
IPW and Mean Score Methods for Time-Course Missing Data
Two Stage Least Squares with Model Implied Instremental Search
Two Stage Least Squares with Model Implied Instrumental Search
Two Stage Least Squares with Model Implied Instrumental Variable
Search
Model Implied Instrumental Variable (MIIV) Estimation of
Structural Equation Models
MIcrosimulation Lung Cancer (MILC) model
Algorithm to Compute Monitor Independent Movement Summary Unit
(MIMS-Unit)
Encode "License-Plates" from Sequences and Decode Them Back
Mutant Identification through Phenotypic High throughput Enabled
NOrmalization
Mutant Identification through Probabilistic High throughput
Enabled NOrmalization
Measurement Invariance Assessment Using Random Effects Models
and Shrinkage
Multiple Imputation Random Lasso for Variable Selection with
Missing Entries
Bayesian Model Search and Multilevel Inference for SNP
Association Studies
Implementing the MI-Wilson Confidence Interval
Evaluation of the FIM in NLMEMs using MCMC
Pharmacometric tools for data preparation, analysis, simulation, and reporting
Pharmacometric tools for data preparation, modeling, simulation,
and reporting
Mixture summary method for multiple imputation
A Modern K-Means (MKMeans) Clustering Algorithm
Maximum Likelihood Inference on Multi-State Trees
Variational Autoencoder Models for IRT Parameter Estimation
Latent Class Item Response Theory Models Under 'Within-Item
Multi-Dimensionality'
Latent Class Item Response Theory (LC-IRT) Models under
Within-Item Multidimensionality
Methylation Linear Discriminant Analysis (MLDA)
Interactive Document for Working with Discriminant Analysis
Collection of Machine Learning Datasets for Supervised Machine
Learning
Maximum likelihood estimate of penetrance parameters
Statistical Inference for Asymptotic Efficient Closed-Form
Estimators
Computation of the MLE for bivariate (interval) censored data
Computation of the MLE for Bivariate Interval Censored Data
Datasets for Use with Salvan, Sartori and Pace (2020)
Maximum Likelihood Estimation of DNA Methylation and
Hydroxymethylation Levels
Maximum Likelihood Estimation of DNA Methylation and
Hydroxymethylation Proportions
Estimating Frequencies, Prevalence and Multiplicity of Infection
Model Selection in Multivariate Longitudinal Data Analysis
Multiplex Ligation-Dependent Probe Amplification Data Analysis
MLPA analysis to detect gains and loses in genes
Multi-Label Prediction Using Gibbs Sampling (and Classifier
Chains)
A package for Multilinear Regression Model Population Analysis
Interactive Application for Working with Multiple Linear
Regression
A Stochastic Block Model for Multilevel Networks
Mean Length-Based Estimators of Mortality using TMB
Maximum Likelihood Estimation of the Niche Preemption Model
Single-Sample Classifier of Medulloblastoma Subtypes for
Medulloblastoma Patient Samples, Mouse Models, and Cell Lines
Gene Expression Datasets for the 'MM2S' Package
Inference of Linear Mixed Models Through MM Algorithm
Data for Mathematical Modeling and Applied Calculus
Minimal Multilocus Distance (MMD) for Source Attribution and
Loci Selection
Robust Estimation of Copulas by Maximum Mean Discrepancy
Multivariate Multinomial Distribution Approximation and
Imputation for Incomplete Data
Multivariate Multinomial Distribution Approximation and
Imputation for Incomplete Categorical Data
Detecting Differentially Variable Genes Using the Mixture of
Marginal Distributions
Microbe-Metabolite Interactions-Based Metabolic Profiles
Predictor
Model selection uncertainty and model mixing
Fitting Markov-Modulated Linear Regression Models
Multi-Marker Molecular Signature for Treatment-specific Subgroup
Identification
Case Classification and Selection Based on Regression Results
Fixed effects Selection in Linear Mixed Models
Fixed Effects Selection in Linear Mixed Models
Missing Multivariate Bayesian Variable Selection
Convert Dates to MMWR Day, Week, and Year
Clustering Data with Non-Ignorable Missingness using
Semi-Parametric Mixture Models
Diagnostic Tools for a Multivariate Negative Binomial Model
Interactive Shiny Presentation for Working with Multinomial
Logistic Regression
Simulated Predicted Probabilities for Multinomial Logit Models
Multivariate Nonparametric Methods. An Approach Based on Spatial
Signs and Ranks
MNP: R Package for Fitting the Multinomial Probit Models
MNP: R Package for Fitting Multinomial Probit Models
R Package for Fitting Multinomial Probit Models
R Package for the Fitting the Multinomial Probit Model
R Package for Fitting the Multinomial Probit Model
Multi-objective optimization for collecting cluster alternatives
Multi-Objective Optimization for Collecting Cluster Alternatives
Acquisition and Processing of MODIS Products
Provides a Function to Download MODIS Snow Cover
Interface to the 'MODIS Land Products Subsets' Web Services
A Tool for Automating Download and Preprocessing of MODIS Land
Products Data
Find, Download and Process MODIS Land Products Data
Multiple Objective Latin Hypercube Design
Basic Quality Data Assurance for Epidemiological Research
Multi-Omic Integration via Sparse Singular Value Decomposition
Effect Size and Confidence Interval Calculator
Check Time Homogeneity and Markov Chain Order
Multi-Patient Analysis of Genomic Markers
Treatment Allocation in Clinical Trials by the Maximal Procedure
Multivariate Process Capability Indices (MPCI)
Data sets and scripts for Modeling Psychophysical Data in R
Data sets and scripts for Modeling Psychophysical Data in R.
Data Sets and Scripts for Modeling Psychophysical Data in R
A Two-Step Approach to Testing Overall Effect of
Gene-Environment Interaction for Multiple Phenotypes
Computation of Multidimensional Poverty Index (MPI)
The package can implement the network-based metabolite pathway
identification of pathways.
Modified Profile Likelihood Estimation for Weibull Shape and
Regression Parameters
Most Probable Number for Serial Dilutions
Most Probable Number and Other Microbial Enumeration Techniques
Maximum Parsimony of Recombination to Infer Parental Genotypes
Estimating Through the Maximum Product Spacing Approach
Modeling Phylogenetic Signals using Eigenvector Maps
Analyze Multinomial Processing Tree Models
Multiverse Analysis of Multinomial Processing Tree Models
Data Sets from Montgomery, Peck and Vining's Book
Data Sets from Montgomery, Peck and Vining
Calculations of One Discrete Model in Several Time Steps
Modelling and Quantitative Methods in Fisheries
Multivariate regression with covariance estimation
Multivariate Regression with Covariance Estimation
Methods for Analyzing Multiple Response Categorical Variables
(MRCVs)
Fitting and Predicting Large-Scale Nonlinear Regression Problems
using Multi-Resolution Functional ANOVA (MRFA) Approach
Markov Random Fields with Additional Covariates
Multi-Resolution Estimation of the Hazard Rate
Management, Display, and Processing of Medical Imaging Data
Multivariate Regression Models for Reserving
Mendelian Randomization (MR) Based PC Algorithm
PC Algorithm with the Principle of Mendelian Randomization
Minimal Clinically Important Difference and Response Shift
Effect for Health-Related Quality of Life
MDL Multiresolution Linear Regression Framework
Multi-Resolution Scanning for Cross-Sample Differences
Multinomial Response Models with Structured Penalties
A Sample Size Calculator for Micro-Randomized Trials
Sample Size Calculator for MRT with Binary Outcomes
A Causal Mediation Method with Methylated Region (MR) as the
Mediator
A multiplicative-regression model for relative survival.
Multiresolution time warping for functional data.
Bayesian Vector Autoregression Models, Impulse Responses and Forecasting.
Markov-Switching Bayesian Vector Autoregression Models
Markov-Switching, Bayesian, Vector Autoregression Models
Multivariate Synthetic Control Method Using Time Series
Analyzing Gene Tree Quartets under the Multi-Species Coalescent
Tests of Multispecies Coalescent Gene Tree Simulator Output
Data and functions for the book Modern Statistical Graphics
Data and Functions for the Book Modern Statistical Graphics
Multivariate Sparse Group Lasso for the Multivariate Multiple
Linear Regression with an Arbitrary Group Structure
Assess Tumor Microsatellite Instability with a Decision Tree
Classifier from Exome Somatic Mutations
Multivariate Statistical Methods with R Applications
Modified Sequential Probability Ratio Test (MSPRT)
A Modified Sequential Probability Ratio Test (MSPRT)
Multi-State Reliability Demonstration Tests (MSRDT)
Tools to Work with Microsoft SQL Server Databases via 'RODBC'
Hypothesis Testing for Markov Switching Models
The MSToolkit library for clinical trial design
Automated Classification of Mass Spectra
Combine Data from Positive and Negative Ionization Mode Finding
Common Entities
Preprocessing of Gas Chromatography-Mass Spectrometry (GC-MS)
data
Multi-Trait Analysis of Rare-Variant Association Study
Mass Transportation Distance Rank Histogram
Maximum Tangent Likelihood and Other Robust Estimation for
High-Dimensional Regression
Maximum Tangent Likelihood Estimation for Linear Regression
Survival Prediction with Multi-Task Logistic Regression
Multi-Task Prediction using Stacking Algorithms
All-purpose toolkit for analyzing multivariate time series (MTS)
and estimating multivariate volatility models
All-Purpose Toolkit for Analyzing Multivariate Time Series (MTS)
and Estimating Multivariate Volatility Models
Multivariate two-sample tests based on K-nearest-neighbors
Methods in Mahalanobis-Taguchi (MT) System
Access to Amazon Mechanical Turk Requester API
Access to Amazon Mechanical Turk Requester API via R
Generate MUAC z-Scores for School Children Aged 5-19 Years Old
Generate MUAC and BMI z-Scores and Percentiles for Children and
Adolescents
Munich Franz-Josef-Strauss Airport Pattern Analysis
Monetary Unit Sampling and Estimation Methods, Widely Used in
Auditing
An Introduction to Applied Multivariate Analysis with R
Multivariate Linear Model with Analytic p-Values
Bayesian Analysis Framework for MVN (Mixture) Distribution
Multivariate Normal Distribution Characterization Test
Test for Multivariate Normal Distribution Based on a
Characterization
Wrap functions of mvpart function providing for instance a more
descriptive tree, the discriminant species at each node (table
1 of Dea'th (2002)), the cascade MRT analysis and an adjusted
R^2 for an MRT model.
MVPARTwrap: Additional features for package mvpart.
MVPARTwrap: Additional functionnalities for package mvpart.
Estimation and Testing for the Multivariate t-Distribution
Compute and Visualize Bivariate Associations
Give power for a given effect size using multivariate
classification methods
Penalized Moving-Window Lasso Method for Genome-Wide Association
Studies
Two Stage Moving-Window Ridge Method for Prediction and
Estimation
Feature Selection (Including Multiple Solutions) and Bayesian
Networks
Exact max-type Cochran-Armitage trend test(CATT)
Machine Learning Algorithms for Innovation in Tourism
Clustering and Prediction using Multi-Task Gaussian Processes
with Common Mean
Magnetic Laplacian Matrix and Magnetic Eigenmap Visualization
k-Means Algorithm with a Majorization-Minimization Method
Providing the Kubernetes-Like Functions for the Non-Kubernetes
Cloud Service
Building Mandalas from Parametric Equations of Classical Curves
An R Interface to the ROPTLIB Library for Riemannian Manifold
Optimization
An R Interface to the 'ROPTLIB' Library for Riemannian Manifold
Optimization
Manly Mixture Modeling and Model-Based Clustering
A Machine-Learning Based Tool to Automate the Identification of
Biological Database IDs
Multiple testing procedures of Cox (2011) and Wang and Cox
(2007).
Multiple Testing Procedures of Cox (2011) and Wong and Cox
(2007)
Mapping Markers to the Nearest Genomic Feature
Mapping Smoothed Odds Ratios from Individual-Level Data
Mapping Smoothed Effect Estimates from Individual-Level Data
Multivariate Analysis of Variance Panel, PERMANOVA and Bayesian
Estimation of meiotic recombination rates using marey maps.
Estimation of Meiotic Recombination Rates Using Marey Maps
Analysis of Marks of Marked Point Processes (for Linux systems only)
Analysis of Marks of Marked Point Processes
Market Matching and Causal Impact Inference
Markov Chain-Based Cost-Optimal Control Charts
Statistical significance of the Markowitz portfolio
Statistical Significance of the Markowitz Portfolio
Masking, Unmasking and Restoring Confidential Data
Maximum Likelihood and Markov chain Monte Carlo methods for Pedigree Reconstruction, Analysis and Simulation.
ML and MCMC Methods for Pedigree Reconstruction and Analysis
Matrix Clustering with Gaussian and Manly Mixture Models
Clustering with Matrix Gaussian and Matrix Transformation
Mixture Models
MatchIt: Nonparametric Preprocessing for Parametric Casual Inference
MatchIt: Nonparametric Preprocessing for Parametric Casual
Inference
Nonparametric Preprocessing for Parametric Casual Inference
Nonparametric Preprocessing for Parametric Causal Inference
Selecting Matched Samples from Multiply Imputed Datasets
A Supplementary Function Set to 'MatchIt'
Calculates SE for Matched Samples from 'MatchIt'
Combining Matching and Linear Regression for Causal Inference
Matching and Weighting Multiply Imputed Datasets
Multivariate and Propensity Score Matching with Balance
Optimization
Computation of the Balance - Sample Size Frontier in Matching
Methods for Causal Inference
Sparse and Dense Matrix Classes and Methods
Data Frame Operations on Sparse and Dense Matrix Objects
Data.frame-Like Operations on Sparse and Dense Matrix Objects
Matrix eQTL: Ultra fast eQTL analysis via large matrix
operations
MatrixEQTL: Ultra fast eQTL analysis via large matrix operations
Matrix eQTL: Ultra Fast eQTL Analysis via Large Matrix
Operations
Penalized Matrix-Normal Linear Discriminant Analysis
Model-Based Clustering via Matrix-Variate Mixture Models
Modelling with Sparse And Dense Matrices
Modelling with Sparse and Dense Matrices
Orthogonal Data Projections with Maximal Skewness
Selecting the Best Set of Relevant Environmental Variables along
with the Optimal Regularization Multiplier for Maxent Niche
Modeling
Inference for Maximin Effect in High-Dimensional Settings
Manage Spatial Metadata for Known Locations
Thematic Plots for Mazama Spatial Datasets
Mazama Science Spatial Data Download and Utility Functions
Spatial Data Download and Utility Functions
Core Functionality for Environmental Time Series
Utility Functions for Building Web Databrowsers
Run a Regenerative Markov chain in Parallel on a Cluster
Multi Calculator to Compute Scores of Adherence to Mediterranean
Diet
Morphological and Structural Features of Medicinal Leaves
Linear Mediation Analysis for Complex Surveys Using Balanced
Repeated Replication
Power and Sample Size Calculations for Clinical Trials
Efficient Simulation-Based Power and Sample Size Calculations
for a Broad Class of Late-Stage Clinical Trials
Accessing and Processing a 'Mega2' Genetic Database
Simulation of Meiosis in Plant Breeding Research
Clustering and Visualizing Distance Matrices
meta-analysis of genome-wide SNP association results
Meta-analysis of genome-wide SNP association results
Read and Analyze 'MetIDQ&trade;' Software Output Files
Color Palettes Inspired by Works at the Metropolitan Museum of
Art
Statistical Methods for Normalizing Metabolomics Data
Separate Metabolites into Likely Measurement Artifacts and True
Metabolites
GUI tool for estimating sample sizes for metabolomic
experiments.
GUI Tool for Estimating Sample Sizes for Metabolomic Experiments
A Shiny App for Sample Size Estimation in Metabolomic
Experiments
An Interactive Visualisation of Meta-Analysis as a Physical
Weighing Machine
Detection of Low-Quality Peaks in Untargeted Metabolomics Data
Evaluate Periodicity in Large Scale Data
Annotate Mass over Charge Values with Databases and Formula
Prediction
MetaDE: Microarray meta-analysis for differentially expressed
gene detection
Meta analysis of multiple microarray data
MetaIntegrator- Meta-Analysis of Gene Expression Data
A Tool for Landscape and Range Expansion Simulation
Landscape and Range Expansion Simulation
Metagenomics Longitudinal Differential Abundant Method
Metagenomics Longitudinal Differential Abundance Method
MetaPCA: Meta-analysis in the Dimension Reduction of Microarray
data
MetaPCA: Meta-analysis in the Dimension Reduction of Genomic
data
Perform the Meta-Analysis for Pathway Enrichment analysis
(MAPE).
Perform the Meta-Analysis for Pathway Enrichment Analysis (MAPE)
MetaQC: Objective Quality Control and Inclusion/Exclusion
Criteria for Genomic Meta-Analysis
MetaQC: Quantitative Quality Assessment for Inclusion/Exclusion
Criteria of Genomic Meta-Analysis
Meta analysis for SNP-set (Sequence) Kernel Association Test
Meta Analysis for SNP-Set (Sequence) Kernel Association Test
Subtracting Summary Statistics of One or more Cohorts from
Meta-GWAS Results
Utility Functions for Conducting and Reporting Meta-Analysis
Utility Functions for Conducting and Interpreting Meta-Analyses
Annotation of Metabolites from Liquid Chromatography-Mass
Spectrometry Data
Normalize Metabolomic Data using QC Signal
Probabilistic latent variable models for metabolomic data.
Probabilistic Latent Variable Models for Metabolomic Data
A Biomarker Validation Approach for Classification and
Predicting Survival Using Metabolomics Signature
Basic Functions to Investigate Metabolomics Data Matrices
Analyze Metaculus Predictions and Questions
Collates Metadata for Climate Surface Stations
An Implementation of Flower Pollination Algorithm in R
Network Analysis of Metabolic Pathways and Gene Based Assemblies
in Metagenomics
Meta-analysis for Classification Data and Correction to
Imperfect Reference
Meth27QC: sample quality analysis, and sample control analysis
Functions for analysis of method comparison studies.
Functions for Analysis of Agreement in Method Comparison Studies
Functions for analysis of agreement in method comparison
studies.
Analysis of Agreement in Method Comparison Studies
Bias and Precision Plots to Compare Two Measurements with
Possibly Heteroscedastic Measurement Errors
Full Bayesian Partition Model for Identifying Differentially
Methylated Loci
Detection of Differentially Methylated Regions using
MethylCap-Seq Data
Weighted Metrics and Performance Measures for Machine Learning
Weighted Metrics, Scoring Functions and Performance Measures for
Machine Learning
A Model-based Approach to Identify Binding Sites in CLIP-Seq
Data
Metabolomics-Based Models for Imputing Risk
Microbiome Regression-Based Kernel Association Test
Discovering the Risk Pathways Based on microRNA
Microbiome Based Sum of Powered Score (MiSPU) Tests
Mixed effects Score Test for continuous outcomes
Utilities for Official Spanish Microdata
Discrete Time Simulation of Mosquito-Borne Pathogen Transmission
Sequence Error Filtering Pipeline for FFPE Samples
Statistical Methods for Microbiome Compositional Data
Interface to the 'Microsoft 365' Suite of Cloud Services
Simulating migration under climate change
Implementing dispersal into species distribution models
Implementing Dispersal into Species Distribution Models
Determining the Minimal Background Area for Species Distribution
Models
A Bayesian Design for Minimum Effective Dosing-Finding Trial
Data sets included in Utts and Heckard's Mind on Statistics
Implementation of the Well-Known Game to Clear Bombs from a
Given Field (Matrix)
Multi-Isotope Labeling for Metabolomics Analysis
Testing Homoscedasticity, Multivariate Normality, and Missing
Completely at Random
Missing Plot Technique in Design of Experiment
Mixture of Student t Distributions using Importance Sampling and
Expectation Maximization
Quantification of Mitochondrial DNA Heteroplasmy
Clustering and Classification using Model-Based Mixture Models
Model based clustering and classification using the mixture of
generalized hyperbolic distributions.
Model based clustering, classification and discriminant analysis
using the mixture of generalized hyperbolic distributions.
Model Based Clustering, Classification and Discriminant Analysis
Using the Mixture of Generalized Hyperbolic Distributions
Classification with Matrix Variate Normal and t Distributions
A Random-Forest-Based Approach for Imputing Clustered Incomplete
Data
Mixtures of Multivariate Shifted Asymmetric Laplace (SAL)
Distributions
Simulating Data to Study Performance of Clustering Algorithms.
Simulating Data to Study Performance of Clustering Algorithms
MixTwice--a Package for Large-Scale Hypothesis Testing
Large-Scale Hypothesis Testing by Variance Mixing
Missing Data Imputation for Continuous and Categorical Data
using Nonparametric Bayesian Joint Models
Tests of Randomness and Tests of Independence
Statistical Tools for the Analysis of Psychophysical Data
Robust Model-Based Clustering for Data Sets with Missing Values
at Random
Fit Mixture Regression Models for Left-Truncated and
Interval-Censored Data
Mixture Regression Models for Left-Truncated and
Interval-Censored Data
Analysis and Exploration of Mixed Microbial Genomic Samples
Hyper Parameter Tuning for Machine Learning, Using Bayesian
Optimization
Graphing for Markov, Hidden Markov, and Mixture Transition
Distribution Models
Parsimonious Model-Based Clustering with Covariates
Gaussian Parsimonious Clustering Models with Covariates
Gaussian Parsimonious Clustering Models with Covariates and a
Noise Component
Inference and Clustering for Mixture of Multinomial Principal
Component Analysis
Learning Hybrid Bayesian Networks using Mixtures of Truncated
Basis Functions
Run Reports, Models, and Scripts from a Mobile Device
Mode Estimation, Even in the Multimodal Case
Tools for Building Regression and Classification Models
Creates Random Forest and Stochastic Gradient Boosting Models,
and applies them to GIS .img files to build detailed prediction
maps.
Modeling and Map Production using Random Forest and Stochastic
Gradient Boosting
Modeling and Map Production using Random Forest and Related
Stochastic Models
Create Model Matrix and Save the Transforming Parameters
Classes and Methods for Training and Using Binary Prediction
Models
Armadillo Client for the Armadillo Service
'OpenID Connect' Discovery and Authentication
Moments of Folded and Doubly Truncated Multivariate
Distributions
A Simple Graphical Representation of the Relative Occurrence and
Co-Occurrence of Events
Allows to Explore Monophyly (or Lack of it) of Taxonomic Groups
in a Phylogeny
Explore Monophyly of Taxonomic Groups in a Phylogeny
Automatic Parallelized Monte Carlo Simulations
Calculations and visualizations related to Geometric
Morphometrics
Calculations and visualisations related to Geometric
Morphometrics
Calculations and Visualisations Related to Geometric
Morphometrics
Computation and Visualization of Adaptive Landscapes
Simple raw data generator based on user-supplied summary
statistics (n, mean, & standard deviation)
Simple raw data generator based on user-specified summary
statistics
Simple raw data generator based on user-specified summary
statistics.
Estimation and Projection of Age-Specific Mortality Rates
The Double-Gap Life Expectancy Forecasting Model
Parametric Mortality Models, Life Tables and HMD
Smoothing and forecasting Poisson counts with P-splines
Smoothing and Forecasting Poisson Counts with P-Splines
A Framework for Various Types of Mortality / Life Tables
Using Web Crawler to Obtain Real-Time Movie Data for Further
Analysis
Automating Mplus Model Estimation and Interpretation
An R Package for Facilitating Large-Scale Latent Variable
Analyses in Mplus
Decision Trees with Structural Equation Models Fit in 'Mplus'
Mposterior: R package for Robust and Scalable Bayes via a Median
of Subset Posterior Measures
Multiple Responses Subgroup Identification using 'GUIDE'
Algorithm
Visualizes the scoring and binning of microsatellite fragment
sizes
Parametric Estimation in Mixed-Effects Stochastic Differential
Equations
A Shiny Application for Automatic Measurements of Tree-Ring
Widths on Digital Images
MultiClass Visualizable Classification using Combination of
Projections
Generates Muller Plot from Population/Abundance/Frequency
Dynamics Data
Optimal Allocation in Stratified Sampling
Multivariate Analysis Using Biplots in R
Equivalence tests and simultaneous confidence intervals for multiple endpoints
Multiple equivalence tests and simultaneous confidence intervals
Multiple Equivalence Tests and Simultaneous Confidence Intervals
Reconstruction of Clones from Integration Site Readouts and
Visualization
Model Multivariate Ordinal Responses Including Response Styles
Permutation Tests for Multivariate Survival Analysis
Multicountry Term Structure of Interest Rates Models
Multiple Copy Number Variation Detection
MultiChIPmixHMM, an R package for ChIP-chip data analysis
modeling spatial dependencies and multiple replicates.
Multivariate Multiscale Framework for Independence Tests
Multiscale Fisher's Independence Test for Multivariate
Dependence
Variable Selection in Sparse Multivariate GLARMA Models
MultiGroup Method and Simulation Data Analysis
Multi Horizon Superior Predictive Ability
Enables Efficient Joining of Data File on Common Fields using
the Unix Utility Join
Estimation and Inference for Multi-Kink Quantile Regression
Multidimensional latent class Item Response Theory models
Multidimensional Latent Class Item Response Theory Models
Meta-analysis of Multivariate Genome Wide Association Studies
Generation of multivariate ordinal variates.
Generation of Multivariate Ordinal Variates
MultiPhen, a package for the genetic association testing of
multiple phenotypes
A Package to Test for Pleiotropic Effects
A Package to Test for Multi-Trait Association
Bias, Precision, and Power for Multi-Level Random Regressions
Multiply Robust Methods for Missing Data Problems
MultiSV: A tool to identify Structural Variations in Multiple
populations
MultiSV: an R package for identification of structural
variations in multiple populations based on whole genome
resequencing
Measures, Tests and Removes Multivariate Skewness
Multiple Imputation for Multivariate Data
Variable Selection in the Multivariate Linear Model
Variable Selection in a Multivariate Linear Model
Performance of N-ary classification testing
Simultaneous confidence intervals for multinomial proportions
according to the method by Sison and Glaz
Simultaneous Confidence Intervals for Multinomial Proportions
According to the Method by Sison and Glaz
Estimating Multiple Breakpoints for a Sequence of Realizations
of Bernoulli Variables
Test and Detection of Explosive Behaviors for Time Series
Multiplier Data Envelopment Analysis and Cross Efficiency
Causal Mediation Analysis in Multisite Trials
Multivariate Random Forest for Linearly Related Output Features
Models Multivariate Cases Using Random Forests
Variable Importance Measures for Multivariate Random Forests
Modelling Multivariate Binary Data with Blocks of Specific
One-Factor Distribution
Stepwise Variable Selection Procedures for Regression Analysis
Chi-Squared Test for Goodness of Fit and Independence Test
Interface to Myrrix. Myrrix is a complete, real-time, scalable
clustering and recommender system, evolved from Apache Mahout.
Interface to Myrrix. Myrrix is a Complete, Real-Time, Scalable
Clustering and Recommender System, Evolved from Apache Mahout
External jars required for package Myrrix.
Handling Methods for Naver News Text Crawling
Fast and Scalable Approximate k-Nearest Neighbor Search Methods
using 'N2' Library
Nondetects And Data Analysis for environmental data
Nondetects and Data Analysis for Environmental Data
Data Analysis for Censored Environmental Data
IRT Parameters for the National Assessment of Education Progress
Non-Local Alternative Priors in Psychology
Performs the processing and normalisation of Nanostring miRNA
and mRNA data
Performs the Processing and Normalisation of Nanostring miRNA
and mRNA Data
Maximum Likelihood method in estimating effective population
size from genetic data
Neighbour Balanced Block Designs (NBBDesigns)
NBD-Dirichlet model of consumer buying behavior for marketing
research
NBD-Dirichlet Model of Consumer Buying Behavior for Marketing
Research
Design and Monitoring of Clinical Trials with Negative Binomial
Endpoint
Negative Binomial Linear Discriminant Analysis
The NBP Negative Binomial Model for Assessing Differential Gene
Expression from RNA-Seq
Negative Binomial Models for RNA-Sequencing Data
Network Based Statistics in R for Mixed Effects Models
Network-Based R-Statistics using Mixed Effects Models
Interactive Document for Working with Naive Bayes Classification
NCBI2R-An R package to navigate and annotate genes and SNPs
Queries and Annotates SNPs, Genes and Pathway from NCBI
Non-Central Squared Copula Models Estimation
Miscellaneous Functions for Creating Adaptive Functions and
Scripts
Clustering of Omics Data of Multiple Types with a Multilayer
Network Representation
Interactive Presentation for Working with Normal Distribution
Tools to Calibrate and Work with NEON Atmospheric Isotope Data
Calculating effective sizes based on known demographic
parameters of a population
Calculating Effective Sizes Based on Known Demographic
Parameters of a Population
Network Assisted Algorithm for Epigenetic Studies Using Mean and
Variance Combined Signals
N-Factor Commodity Pricing Through Term Structure Estimation
The Standard Distribution Functions for the 3D NFW Profile
Bayesian Variable Selection for SNP Data using Normal-Gamma
Interactive 3D Visualization of Molecular Structures
Non-Gaussian State-Space with Exact Marginal Likelihood
Data from the US National Health and Nutrition Examination Study
Non-hierarchical evolutionary multi-objective tree learner to
perform cost-sensitive classification
Scores for Every Season Since the Founding of the NHL in 1917
Bayesian Non-Homogeneous Markov and Mixture Models for Multiple
Time Series
Bayesian NHMM modeling (multiple time series)
Bayesian NHMM Modeling (Multiple Time Series)
Bayesian Non-Homogenous Markov and Mixture Models (Multiple Time
Series)
Non-Homogeneous Markov Switching Autoregressive Models: Fitting,
Simulating, Validating.
Non-Homogeneous Markov Switching Autoregressive Models
Modelling and validation of non homogeneous Poisson processes
Modelling and Validation of Non Homogeneous Poisson Processes
NHS Data Dictionary Toolset for NHS Lookups
NHS and Healthcare Related Data for Education and Training
NHS and Healthcare-Related Data for Education and Training
Draw XmR Charts for NHSE/I 'Making Data Count' Programme
Fast and Accurate Trisomy Prediction in Non-Invasive Prenatal
Testing
Novel Statistical Methods for Studying Near-Infrared
Spectroscopy (NIRS) Time Series Data
Nonlinear least squares examples from NIST
Fundamental Physical Constants and Unit Conversions from NIST
Finds the Best Subset of Points to Sample
An R package for National Longitudinal Survey Analysis
Network Meta-Analysis of Multiple Diagnostic Tests
Detecting Outliers in Network Meta-Analysis
Algorithms and framework for Nonnegative Matrix Factorization
(NMF).
Framework for Nonnegative Matrix Factorization (NMF) algorithms.
Algorithms and framework for Nonnegative Matrix Factorization
(NMF)
Algorithms and Framework for Nonnegative Matrix Factorization
(NMF)
Normalized Mutual Information of Community Structure in Network
Inverse Probability Weighting under Non-Monotone Missing
Numerical Methods and Optimization in Finance
Dose-Response Relationship Analysis of Nanomaterial Toxicity
Preparation, Checking and Post-Processing Data for PK/PD
Modeling
Fast and Versatile Non-Negative Matrix Factorization
Nearest Neighbor Based Multiple Imputation for Survival Data
with Missing Covariates
Calculate Design Parameters for Biomarker Validation Studies
Datasets and Functions to Benchmark Neural Network Packages
Incorporating Previous Findings When Evaluating New Data
Get Weather Data from NOAA Weather Stations
Evaluates complex erf, erfc and density of sum of Gaussian and Student's t
Evaluates complex erf, erfc, Faddeeva, and density of sum of
Gaussian and Student's t
Evaluates Complex Erf, Erfc, Faddeeva, and Density of Sum of
Gaussian and Student's t
Generation of Multivariate Data with Arbitrary Marginals
Non-parametric Bayesian Multiple Imputation for Categorical Data
Non-Parametric Bayesian Multiple Imputation for Categorical Data
Nonparametric Combination of Hypothesis Tests
Nonparametric Methods for Cognitive Diagnostic Models
Nonparametric Methods for Cognitive Diagnosis
Sample Size Calculation for the Proportional Hazards Cure Model
Sample Size Calculation for the Proportional Hazards Mixture
Cure Model
Non-Parametric Maximum Likelihood Estimate for Cohort Samplings
Non-parametric Maximum-Likelihood Estimation for Competing-Risks
Data
Type-specific Failure Rate and Hazard Rate on Competing Risks
Data
Type-Specific Failure Rate and Hazard Rate on Competing Risks
Data
Two-Groups Mixture Model with Covariates
tertiary probabilistic model in predictive microbiology for use
in food manufacture
Nonparametric Multivariate Change Point Model
Normalized Power Prior Bayesian Analysis
Convenience functions and tests for working with the Net
Promoter Score (NPS)
Convenience Functions and Tests for Working With the Net
Promoter Score (NPS)
Bayesian Nonparametrics for Automatic Gating of Flow-Cytometry
Data
Nonparametric Smoothing for contaminated data using
Simulation-Extrapolation
Data sets from "Nonlinear Regression Analysis and Its Applications"
Data sets from "Nonlinear Regression Analysis and Its
Applications"
Metrics for Multiple Testing with Correlated Outcomes
Post-normalization of total copy numbers
An R package to accompany Hollander, Wolfe, and Chicken -
Nonparametric Statistical Methods, Third Edition
Functions and Datasets to Accompany Hollander, Wolfe, and
Chicken - Nonparametric Statistical Methods, Third Edition
National Statistical Office of Mongolia's Open Data API Handler
Simulation and Estimation of the Neyman-Scott Type Spatial
Cluster Models
Normality Test Sets Integrated Function and Figure Methods for
Continuous Variables
NUtrient Cycling and COMpetition Model Undisturbed Open Bog
Ecosystems in a Temperate to Sub-Boreal Climate
Nonparametric Varying Coefficient Spike-and-Slab Lasso
Using Needleman-Wunsch to Match Sample Names
Normalize NanoString miRNA and mRNA data
Normalize NanoString miRNA and mRNA Data
Color Palettes Inspired by National Parks
An examination of indices for determining the number of clusters
: NbClust Package
NbClust package for determining the best number of clusters
Determining the Best Number of Clusters in a Data Set
Exceptionnal Network Motifs in biological networks
Negative Binomial and Beta Binomial Bayesian Regression Models
Estimation of Vaccine Efficacy using Negative Control Outcomes
Implementation of the Nemenyi post-hoc test to find the groups
of data that differ after a statistical test of multiple
comparisons, e.g. Friedman test. Reference: Japkowicz/Shah
(2011), Evaluating Learning Algorithms. Pages 255 ff.
Single Reader Between-Cases AUC Estimator in Nested Data
Modeling and Generating Synthetic Versions of Nested Categorical
Data in the Presence of Impossible Combinations
Modeling, Imputing and Generating Synthetic Versions of Nested
Categorical Data in the Presence of Impossible Combinations
Survival Analysis for Cohorts with Missing Covariate Information
A Nested Menu Widget for 'Shiny' Applications
Inference of Causal Links Between a Network and an External
Variable
Network-Based Discriminant Analysis Subject to Multi-Label
Classes
Network Applications to Facial Communication Data
Estimates network indices, including trophic structure of foodwebs
Estimating network indices, including trophic structure of foodwebs in R
Estimating network indices, including trophic structure of
foodwebs in R
Estimating Network Indices, Including Trophic Structure of
Foodwebs in R
Methods for Unweighted and Weighted Network Integration
A Port of 'NetLogo' Functions and Language to R
Build and Run Spatially Explicit Agent-Based Models
Dynamic Mixed-Membership Network Regression Model
Origin Estimation for Propagation Processes on Complex Networks
NetPreProc: Network Pre-Processing and normalization.
Permutation Testing Network Module Preservation Across Datasets
Calculates Basic Network Measures Commonly Used in Network
Medicine
Actuarial Functions for Non-Life Insurance Modelling
Network Strengths and Weaknesses Analysis
Graphic Presentation of Complex Genomic and Network Data
Analysis
Statistical inference on populations of weighted or unweighted
networks.
Bayesian Package for Network Changepoint Analysis
Statistical Comparison of Two Networks Based on Three Invariance
Measures
Extinction Simulation in Ecological Networks
Regression Model on Network-Linked Data with Statistical
Inference
Network Comparison Based on Structural Equivalence and Graphlets
Methods and Measures for Brain, Cognitive, and Psychometric
Network Analysis
Visualization and Analysis Tools for Neural Networks
Computes pdf, cdf, quantile and random numbers for 19 general
families of distributions
Computes Pdf, Cdf, Quantile and Random Numbers, Measures of
Inference for 19 General Families of Distributions
Extending the Newman Studentized Range Statistic to
Transcriptomics
Data and Source Code From: Nitrogen Uptake and Allocation
Estimates for Spartina Alterniflora and Distichlis Spicata
Solve Nonlinear Optimization with Nonlinear Constraints
Models for Non Linear Causality Detection in Time Series
Utilities and kinship information for Behavioral Genetics
research using the NLSY.
Utilities and kinship information for Behavior Genetics and
Developmental research using the NLSY.
Utilities and kinship information for behavior genetics and
developmental research using the NLSY.
Utilities and Kinship Information for Research with the NLSY
Miscellaneous Functions Used at 'Numeract LLC'
Bayesian Inference on Univariate Normal Mixtures
Label Noise Filters for Data Preprocessing in Classification
Biplot representations of categorical data
Noncompartmental Analysis for Pharmacokinetic Data
Multivariate Lomax (Pareto Type II) and Its Related
Distributions
a Non-Parametric Statistical Significance Test for Rolling
Correlation
a Non-Parametric Statistical Significance Test for Rolling
Window Correlation
Model Checking and Variable Selection in Nonparametric
Regression
Metagenome Coverage Estimation and Projections for 'Nonpareil'
Normalize Gene Expression Data using Evaluated Methods
A Graphical User Interface for Testing Normality Visually
Computes PDF, CDF, Quantile, Random Numbers and Measures of
Inference for 3 General Families of Distributions
Statistical Framework to Define Subgroups in Complex Datasets
Food Composition Information and Dietary Assessment
Harvest Metadata Using OAI-PMH Version 2.0
Objective Bayesian Analysis for Spatial Regression Models
Calculate the Open Bodem Index (OBI) Score
Estimate the Population Size for the Mb Capture-Recapture Model
Objective Bayesian Model Discrimination in Follow-Up Designs
Download Data from the 'Open Case Studies' Repository
Open Document Databases (.odb) management
Open Document Databases (.odb) Management
Sensitivity Analysis of Ordinary Differential Equations
Statistical Methods for Outcome-Dependent Sampling Designs
Optimal Estimation of Function Parameters by Iterated
Linearization
Ordered Homogeneity Pursuit Lasso for Group Variable Selection
Survival analysis supplement to OpenIntro guide
Observers Needed to Evaluate Subjective Tests
Efficient authenticated interaction with the O*NET API.
Efficient authenticated interaction with the O*NET API
Efficient Authenticated Interaction with the O*NET API
The Online Principal Component Estimation Method
Several confidence intervals for the odds ratio
Order Restricted Clustering for Microarray Experiments
Estimate parent distributions with data of several order
statistics
Order-restricted Information Criterion-based Clustering
Algorithm
Order-Restricted Information Criterion-Based Clustering
Algorithm
The Online Regularized K-Means Clustering Algorithm
Connects to Google Cloud API for Label Detection
Identification of Differentially Expressed Genes
Ordered Subset Analysis for Case-Control Studies
Finds an Optimal System of Distinct Representatives
Signal Component Analysis for Optically Stimulated Luminescence
Add a Scale Bar to 'OpenStreetMap' Plots
Orthogonal Sparse Non-Negative Matrix Tri-Factorization
Over Sampling for Time Series Classification
Assessing Surrogacy with a Censored Outcome
Optimal Trees Ensembles for Regression, Classification and Class
Membership Probability Estimation
Variable Selection for Optimal Treatment Decision
North Temperate Lakes - Microbial Observatory 16S Time Series
Data and Functions
Mean Partition, Uncertainty Assessment, Cluster Validation and
Visualization Selection for Cluster Analysis
Data Fusion using Optimal Transportation Theory
Analysis of evolutionary rates in an OU framework
Analysis of Evolutionary Rates in an OU Framework
Optimal Weight Exchange Algorithm for Optimal Designs for Three
Models
Outright Tool for the Analysis of Spatial Inequalities and
Segregation
Collect and Process Physical Activity Direct Observation Data
Visualisation of Oceanographic Data and Model Output.
Visualisation of Oceanographic Data and Model Output
Odds Plot to Visualise a Logistic Regression Model
Modeling the Kinetics of CO2 Production in Alcoholic
Fermentation
Modeling the Kinetics of Carbon Dioxide Production in Alcoholic
Fermentation
OGA+HDIC+Trim and High-Dimensional Linear Regression Models
R Client for Mobilize/Andwellness server
Multivariate Methods Based on the Oja Median and Related
Concepts
A k-Nearest Neighbours Ensemble via Optimal Model Selection for
Regression
Facilitate Analysis of Proteomic Data from Olink
Omega-Generic: Composite Reliability of Multidimensional
Measures
Open-Source Software for 'Omic' Data Analysis and Visualization
Perform Two-Way Orthogonal Partial Least Squares
Data Integration with Two-Way Orthogonal Partial Least Squares
Univariate Bootstrapping and Other Things
A Modified Fisher’s Method to Test Overall Gene-Level Effect
Test of Between-Group Differences in the Onset of Senescence
Bindings for Onboard Data's Building Data API
Bayesian Logistic Regression for Oncology Dose-Escalation Trials
Optimal One-Arm Two-Stage Phase II Design with Survival Endpoint
Planing, Monitoring and Evaluating Oncological Phase 2 Studies
Planning, Conducting, and Analysing Single-Arm Phase II Studies
One-Arm Clinical Trial Designs for Time-to-Event Endpoint
Prediction of condition-specific transcription factor
interactions
Machine Learning Classification Algorithm with Enhancements
One Rule Machine Learning Classification Algorithm with
Enhancements
One Sample Mendelian Randomization and Instrumental Variable
Analyses
Statistical Methods for Modeling Operational Risk
Statistical Methods for Modelling Operational Risk
Utility functions for dealing with data in Opasnet
(www.opasnet.org) environment.
Opasnet Modelling Environment Utility Functions
Agent-Based Model for Modelling the COVID-19
Quantitative Analysis and Visualization of LUCC
Exploring Machine Learning Better, Together
Open Machine Learning and Open Data Platform
Control number of OpenMP threads dynamically
Control Number of OpenMP Threads Dynamically
Interpretive Clustering for Repertory Grids
Analyze, Process, Identify, and Share, Raman and (FT)IR Spectra
Analyze, Process, Identify, and Share Raman and (FT)IR Spectra
Transmissions and Receptions in an End to End Network
Broadcasts, Transmissions and Receptions in an Opportunistic
Network
Routing Distribution, Broadcasts, Transmissions and Receptions
in an Opportunistic Network
Optimal Designs for the 5-Parameter Logistic Model
Circular, Periodic, or Framed Data Clustering: Fast, Optimal,
and Reproducible
Near-Optimal and Balanced Group-Sequential Designs for Clinical
Trials with Continuous Outcomes
Estimation of value and hedging strategy of call and put
options.
Estimation of Optimal Size for a Holdout Set for Updating a
Predictive Score
Optimal Two and Three Stage Designs for Single-Arm and Two-Arm
Randomized Controlled Trials with a Long-Term Binary Endpoint
Estimating the Optimal Number of Migration Edges from 'Treemix'
Optimal Level of Significance for Regression and Other
Statistical Tests
Simplifies and Automates Analyzing and Reporting OptiQuant's log
Data
Optimization Based Ensemble Forecasting Using MCS Algorithm
Create the Best Train for Classification Models
Computing optimal cutpoints in diagnostic tests
Computing Optimal Cutpoints in Diagnostic Tests
Algorithms for D-, A-, and IV-Optimal Designs
A Toolbox for Computing Efficient Designs of Experiments
Model Free Approach to Quantifying Surrogacy
Option Pricing with Efficient Simulation Algorithms
This package estimates a mix of lognormal distributions from
interest-rate option data.
Least squares, logistic, and Cox-regression with ordered
predictors
Least Squares, Logistic, and Cox-Regression with Ordered
Predictors
Compute least squares estimates of one bounded or two ordered
antitonic regression curves
Compute least squares estimates of one bounded or two ordered
isotonic regression curves
Concurrent generation of ordinal and normal data with given
correlation matrix and marginal distributions
Concurrent Generation of Ordinal and Normal Data with Given
Correlation Matrix and Marginal Distributions
Biplot representations of ordinal variables
Fast Spatial Ancestry via Flexible Allele Frequency Surfaces
Dynamic Panel Models with Orthogonal Reparameterization of Fixed
Effects
Rice Microarray Probe ID Conversion, from Probe ID to RAP-DB ID
Generation of Customizable, Discretized Time Series of
Oscillating Species
O-Stats, or Pairwise Community-Level Niche Overlap Statistics
basic tools for the analysis of disease outbreaks.
Basic Tools for the Analysis of Disease Outbreaks
Outlier Detection using Quantile Regression for Censored Data
Outlier Detection using quantile regression for Censored Data
Outlier detection for replicated high-throughput data
Outlier Detection for Multi-replicated High-throughput Data
Functions for Solving Multiple-criteria Decision-making Problems
Processing of Oxy-Bisulfite Microarray Data
Posterior Predictive Checks of Coalescent Models
Partition-Assisted Clustering and Multiple Alignments of
Networks
Penalized and Constrained Lasso Optimization
Variational Bayes (VB) Approximation of Gibbs Posteriors with
Hinge Losses
Nonparametric Estimation of Preferential Attachment and Node
Fitness in Temporal Complex Networks
Joint Inference of Preferential Attachment and Node Fitness in
Temporal Complex Networks
Modelling and Inferencing Attachment Mechanisms of Temporal
Complex Networks
Generative Mechanism Estimation in Temporal Complex Networks
Pairwise Association of Functional Annotations
The package can identify the dysregulated KEGG pathways based on
global influence from the internal effect of pathways and
crosstalk between pathways.
Pathway analysis methods for genomewide association data
Pathway Analysis Methods for Genomewide Association Data
Identify Intra and Inter-Donor Variations in Bulk or Single Cell
Longitudinal Dataset
Rank Aggregation with Partition Mallows Model
Generate Heatmaps Based on Partitioning Around Medoids (PAM)
Miscellaneous Functions for Passive Acoustic Analysis
Preferential Attachment Based Common Neighbor Distribution
Derived Functional Associations
Model-Based Clustering with Regularization Methods for
High-Dimensional Data
Calculate Power and Sample Size for Two Sample Mean Tests
Probability and Statistics with R, Second Edition
Summarize Daily Physical Activity from 'SenseWear' Accelerometer
Data
A Tool for Identification of Differentially Expressed Pathways
using Multi-Statistic Comparison
Summarize Daily Physical Activity from 'activPAL' Accelerometer
Data
Prediction and Accuracy Measures for Nonlinear Models and for
Right-Censored Time-to-Event Data
Assessing the Partial Association Between Ordinal Variables
Protracted birth-death model of diversification
Protracted Birth-Death Model of Diversification
Partially Balanced Incomplete Block Designs
Estimating the Probability of Being in Response and Related
Outcomes
A set of datasets used in my classes or in the book ,,Modele
liniowe i mieszane w R, wraz z przykladami w analizie danych''
A Set of Datasets Used in My Classes or in the Book 'Modele
Liniowe i Mieszane w R, Wraz z Przykladami w Analizie Danych'
Permutation Based Non-Parametric Analysis of CRISPR Screen Data
The Probability of Being in Response Function and Its Variance
Estimates
Mapping Fisheries Data and Spatial Analysis Tools
GUI Tools Made Easy: Interact with Models, Explore Data, Give
Dynamic Presentations
GUI Tools Made Easy: Interact with Models and Explore Data
Segmenting Multiple Time Series by Contemporaneous Linear
Transformation
Tools for Principal Component Analysis-Based Data Structure
Comparisons
Match Cases to Controls Based on Genotype Principal Components
Multivariate analysis for a mixture of quantitative and
qualitative data
Semiparametric regression analysis of panel count data using
monotone splines
Finding the Number of Significant Principal Components
Computation of Ancestry Scores with Mixed Families and Unrelated
Individuals
Implementation of POSIXct work-alike for 365 and 360 day
calendars.
Implementation of POSIXct Work-Alike for 365 and 360 Day
Calendars
PCIT algorithm - Partial Correlation Coefficient with
Information Theory
Partial Correlation Coefficient with Information Theory
Group Regression Models for Risk Protein Complex Identification
Simulation and Likelihood Calculation of Phylogenetic
Comparative Models
Fast Likelihood Calculation for Phylogenetic Comparative Models
Model Response Styles in Partial Credit Models
Bandwidth Selector with Penalized Comparison to Overfitting
Criterion
PCPS - Principal Coordinates of Phylogenetic Structure
Principal Coordinates of Phylogenetic Structure
Quantitative Polymerase Chain Reaction (qPCR) Machine Learning
Helper Tool
Quantitative Polymerase Chain Reaction (qPCR) Data Mining and
Machine Learning Helper Tool
Quantitative Polymerase Chain Reaction (qPCR) Data Mining and
Machine Learning Toolkit
Calculate the probability of correct selection (PCS)
Calculate the Probability of Correct Selection (PCS)
Parallel Constraint Satisfaction Networks in R
Extract Sentences and Tables from PDFs with User Interface
Extract Tables and Sentences from PDFs with User Interface
Multivariate Nonparametric Probability Density Estimator
PDQ Functions via Gram Charlier and Cornish Fisher
Approximations
PDQ Functions via Gram Charlier, Edgeworth, and Cornish Fisher
Approximations
Positive definite sparse covariance estimators
Positive Definite Sparse Covariance Estimators
Collection of Tools for PD Rating Model Development
Collection of Tools for PD Rating Model Development and
Validation
Pareto Enrichment Analysis for Combining Heterogeneous Datasets
Population Proportion Estimation using Group Testing
Post-Translational Modification Enrichment, Integration, and
Matching Analysis
Functions for Aster Book on Inverse Theory
Geophysical Inverse Theory and Optimization
Probabilistic Sex Estimate using Logistic Regression, Based on
VISual Traits of the Human Os Coxae
A Penalized EM algorithm incorporating missing-data mechanism
Multivariate Analysis of Variance Based on Distances and
Permutations
Simulation and Reconstruction of PET Images
Functions related to prevented fraction.
Penalized Generalized Estimating Equations in High-Dimension
Nested Resolvable Designs and their Associated Uniform Designs
Recursive method for construction of nested resolvable designs
and uniform designs associated
Discover Probable Duplicates in Plant Genetic Resources
Collections
Discover Probable Duplicates in Plant Genetic Resources (PGR)
Collections
Common Public Health Statistics and their Confidence Intervals
Tools for Inference in the Presence of a Monotone Likelihood
Penalised Maximum Likelihood Estimation for Hidden Semi-Markov
Models
Functions for phylogenetically-based statistical analyses.
Functions for phylogenetically based statistical analyses
Functions for Phylogenetically Based Statistical Analyses
Poisson Hurdle Clustering for Sparse Microbiome Data
Evaluation of the proportional hazards assumption with a
standardized score process
Evaluation of the Proportional Hazards Assumption with a
Standardized Score Process
Bayesian Models for Partly Interval-Censored Data
Self contained gene set analysis for gene- and
pathway-environment interaction analysis
Self Contained Gene Set Analysis for Gene- And
Pathway-Environment Interaction Analysis
Estimates the parameters of a trading-tree model for the
computation of the probability of informed trading
Perturbation Clustering for Data Integration and Disease
Subtyping
Clustering Algorithm for Data Integration and Disease Subtyping
Estimation of the Probability of Informed Trading
Public Key Infrastucture for R based on the X.509 standard
Public Key Infrastucture for R Based on the X.509 Standard
Pharmacokinetic and Pharmacodynamic Data Management Functions
Tools for Performing Pharmacokinetic-Pharmacodynamic Simulations
The Parameter Converter of the Pharmacokinetic Models
PKfit- A Tool for Data Analysis in Pharmacokinetics
A Data Analysis Tool for Pharmacokinetics
Model diagnostics for pharmacokinetic models
Model diagnostics for population pharmacokinetic models
A reporting pipeline for checking population pharmacokinetic
model assumption
unified computational interfaces for pop PK
unified computational interfaces for population PK
Tabulate P.L. 94-171 Redistricting Data Summary Files
Portmanteau Local Feature Discrimination for Matrix-Variate Data
Multiplicity control using Pooled LIS statistics
Multiplicity control using Pooled LIS statistic
Multiplicity Control using Pooled LIS Statistic
Bayesian Analysis of Finite Mixtures of Plackett-Luce Models for
Partial Rankings/Orderings
Prediction with Less Overfitting and Robust to Noise
Statistical inference in partial linear regression models
Statistical Inference in Partial Linear Regression Models
Methods for Partial Linear Single Index Model
Estimate (Generalized) Linear Mixed Models with Factor
Structures
Multivariate Ordered Probit Model via Pairwise Likelihood
Power Logit Regression for Modeling Bounded Data
Identify Prognosis-Related Pathways Altered by Somatic Mutation
Calculate Pairwise Multiple Comparisons of Mean Rank Sums.
Calculate Pairwise Multiple Comparisons of Mean Rank Sums
Calculate Pairwise Multiple Comparisons of Mean Rank Sums
Extended
Penalized Multi-Band Learning for Circadian Rhythm Analysis
Using Actigraphy
Downloading, Reading and Analysing PNADc Microdata
Downloading, Reading and Analysing PNADC Microdata
Downloading, Reading and Analyzing PNADC Microdata
Downloading, Reading and Analysing PNS Microdata
Downloading, Reading and Analyzing PNS Microdata
Color Palettes Inspired by Nature in the US Pacific Northwest
An Elastic-Net Regularized Presence-Only Model
Probability of Detection for Qualitative PCR Methods
Principal Orthogonal ComplEment Thresholding (POET) method
Principal Orthogonal ComplEment Thresholding (POET) Method
Downloading, Reading and Analysing POF Microdata
Downloading, Reading and Analyzing POF Microdata
Downloading, Reading and Analyzing POF Microdata - Package in
Development
Adaptive Association Tests for Multiple Phenotypes using
Proportional Odds Model (POM-aSPU)
Power Simulation for Sequential Analysis and Multiple Hypotheses
Power Simulation for Sequential Analyses and Multiple Hypotheses
Phylogeny-Guided OTU-Specific Association Test for Microbiome
Data
Generalized Pareto Distribution and Peaks Over Threshold
The Phylogenetic Ornstein-Uhlenbeck Mixed Model
Partition of Variation Variance Component Analysis Method
Projection Pursuit for Cluster Identification
Prognostic Predictive Lasso for Biomarker Selection
Probabilistic Two Sample Mendelian Randomization
Process Performance Qualification (PPQ) Plans in Chemistry,
Manufacturing and Controls (CMC) Statistical Analysis
Partial Profile Score Feature Selection in High-Dimensional
Generalized Linear Interaction Models
Projection Pursuit Classification Tree Visualization
Efficient Mixed Model Analysis of Count Data in Large-Scale
Genomic Sequencing Studies
Conduct a Prospective or Retrospective Design Analysis
Embedding and Clustering with Alignment for Spatial Datasets
Interactive Document for Preprocessing the Dataset
Parametric Simplex Method for Sparse Learning
Eigenvalues and Singular Values and Vectors from Large Matrices
Penalized Regression with Inferred Seasonality Module -
Forecasting Unemployment Initial Claims using 'Google Trends'
Data
Protocol Inspection and State Machine Analysis
Plot Flow Charts According to the "PRISMA" Statement
Interactive Document for Working with Basic Probability
The package can prioritize candidate disease metabolites based
on global functional relationships between metabolites in the
context of metabolic pathways
Generic Coordinate System Transformations Using 'PROJ'
Preference Ranking Organization METHod for Enrichment of
Evaluations
Patient Reported Outcomes Regression Analysis
Functions to Score Commonly-Used Patient-Reported Outcome (PRO)
Measures and Other Psychometric Instruments
Tools to Score Patient-Reported Outcome (PRO) and Other
Psychometric Measures
Bayesian Prior and Posterior Predictive Replication Assessment
Precision-Recall and ROC Curves for Weighted and Unweighted Data
Stochastic Simulation of Streamflow Time Series using Phase
Randomization
Dirichlet Process Bayesian Clustering, Profile Regression
Probability scale residuals and residual correlations.
Probability-Scale Residuals and Residual Correlations
Bootstrapping for Propensity Score Analysis
Analysis of Parent-Specific DNA Copy Numbers
Parent Specific DNA Copy Number Estimation
Algorithm for Pattern Sequence Based Forecasting
Forecasting of Univariate Time Series Using the Pattern
Sequence-Based Forecasting (PSF) Algorithm
Portfolio Safeguard: Optimization, Statistics and Risk
Management
Pakistan Social and Living Standards Measurement Survey 2014-15
Non-Linear Mixed-Effects modelling using Stochastic Differential Equations.
Non-Linear Mixed-Effects modelling using Stochastic Differential
Equations.
Non-Linear Mixed-Effects Modelling using Stochastic Differential
Equations
Population structure inference using mixture model
Analysis of Physiologically Structured Population Models
Power and Sample Size for Health Researchers
Power and Sample Size for Health Researchers via Shiny
Test of Independence & Image Structural Similarity Measure PSSIM
Features Extracted from Position Specific Scoring Matrix (PSSM)
Probabilistic Suffix Trees and Variable Length Markov Chains
Panel Smooth Transition Regression Modelling
Propensity Score Weighting Methods for Dichotomous Treatments
Estimation for the Power Series Cure Rate Model
Propensity Score Weighting for Causal Inference
Propensity Score Weighting for Causal Inference with
Observational Studies and Randomized Trials
PTE and RP for Optimally-Transformed Surrogate
Quality Report Generation for MaxQuant Results
Quality Report Generation for MaxQuant and mzTab Results
Percentile Estimation of Fetal Weight for Twins by Chorionicity
'A Collection of Physical and Chemical Adsorption Isotherm
Models'
A Collection of Physical and Chemical Adsorption Isotherm Models
Parameter Estimation, and Plot Visualization of Adsorption
Kinetic Models
Color Identification of Fungi Based on Rayner (1970) and Known
Fungal Pigment Association
Moisture Sorption Isotherm Modeling Program
High-Dimensional Variable Selection with Presence-Only Data
Population Viability Analysis with Data Cloning
Computes phylogenetic eigenvectors regression (PVR) and
phylogenetic signal-representation curve (PSR) (with null and
Brownian expectations)
Computes Phylogenetic eigenVectors Regression and Phylogentic
Signal-Representation curve (with null and Brownian
expectancies)
Phylogenetic Eigenvectors Regression and Phylogentic
Signal-Representation Curve
Time Series Regression Using the Power Weighted Densities (PWD)
Approach
Design and Monitoring of Survival Trials Accounting for Complex
Situations
Utilities for Working with Air Quality Monitoring Data
Provides a Function to Calculate Prize Winner Indices Based on
Bibliometric Data
Pabon Lasso Graphs and Comparing Situations of a Unit in Two
Different Times
classical pair trading based on cointegration in finance
Visualization using Eulerian tours and Hamiltonian decompositions
Visualization using Eulerian tours and Hamiltonian
decompositions
Pairing Up Units and Vectors in Panel Data Setting
Multiple Indicator Cluster Survey (MICS) 2014 Child
Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2014 Household
Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2014 Household Listing
Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2014 Women
Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2017-18 Data for
Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2017-18 Birth History
of Children Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2017-18 Children Age
5-17 Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2017-18 Household
Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2017-18 Maternal
Mortality Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2017-18 Men
Questionnaire Data for Punjab, Pakistan
Preprocessing and Modeling Kinase Activity Profiles in PamChip
Data
A Semi-Parametric Test for Specifying Functional Form
Long Term Prediction for Epidemic and Pandemic Data
Random Effects and Sample Selection Models for Panel Counting
Data
Random Effects and/or Sample Selection Models for Panel Count
Data
Matching Methods for Causal Inference with Time-Series
Cross-Sectional Data
Parallel Bayesian Optimization of Hyperparameters
parallel implementation of the "segment" function from package
"DNAcopy"
parallel implementation of the "segment" function of package
"DNAcopy"
Parallel implementation of the "segment" function of package
"DNAcopy"
Parallel Digital Soil Mapping using Machine Learning
Random Forest Classification with Parallel Computing
Support for Parallel Computation, Logging, and Function
Automation
Paralellised Versions of Constraint Based Causal Discovery
Algorithms
Helpers for parameters in black-optimization, tuning and maching
learning.
Helpers for parameters in black-box optimization, tuning and
machine learning.
Helpers for Parameters in Black-Box Optimization, Tuning and
Machine Learning
Helpers for Parameters in Black-Box Optimization, Tuning and
Machine Learning.
Conduct the Parent-Offspring Test Using Monomorphic SNP Markers
The Pareto and the Piecewise Pareto Distribution
The Pareto, Piecewise Pareto and Generalized Pareto Distribution
Computing, fitting and validating the Pareto Positive Stable
distribution
Computing, fitting and validating the PPS distribution
Computing, Fitting and Validating the PPS Distribution
Partially Censored Regression Models Based on Heavy-Tailed
Distributions
Estimation and Diagnostics for Partially Linear Censored
Regression Models Based on Heavy-Tailed Distributions
Preprocessing of Aligned Sequences from HTS Analyses
Backwards Variable Selection for Paths using M Plus
Class-focused pattern metric comparisons using simulation
Class-Focused Pattern Metric Comparisons using Simulation
Deciphering Biological Networks with Patterned Heterogeneous
Measurements
Pattern Discovery in PDB Structures of Metalloproteins
Two and Three Dimensional Kolmogorov-Smirnov Two-Sample Tests
Estimation of the peak-to-trough ratio of a seasonal variation
component
Compute the Annotation Error of Peak Calls
Dynamic Programming Algorithm for Peak Detection in ChIP-Seq
Data
Joint Peak Detection in Several ChIP-Seq Samples
Optimal Segmentation Subject to Up-Down Constraints
Independent component analysis using score functions from the Pearson system
Independent component analysis using score functions from the
Pearson system
Independent Component Analysis using Score Functions from the
Pearson System
An implementation for association analysis with CNV data.
Luck-Corrected Peer Performance Analysis in R
Semiparametric Regression Analysis of Interval-Censored Data
using Penalized Splines
Group l1 penalized logistic normal multinomial (LNM) regression
model.
Insilico peptide mutation, digestion and homologous comparison.
Calculate indices and theoretical physicochemical properties of
peptides and proteins sequences
Calculate indices and theoretical physicochemical properties of
peptides and protein sequences
Calculate Indices and Theoretical Properties of Protein
Sequences
Calculate Indices and Theoretical Physicochemical Properties of
Protein Sequences
Using Percolation and Conductance to Find Information Flow
Certainty in a Direct Network
PerfMeas: Performance Measures for ranking and classification
tasks
Performance Measures for Ranking and Classification Tasks
Econometric tools for performance and risk analysis.
Econometric tools for performance and risk analysis
Econometric Tools for Performance and Risk Analysis
Permutational algorithm to simulate survival data
Permutational Algorithm to Simulate Survival Data
Conduct Permutation Analysis of Variance in R
Automated Persomics Array Image Extraction
Computes Danish Pesticide Load Indicator
Pharmacovigilance signal detection methods extended to the multiple comparison setting.
PhViD: a R package for PharmacoVigilance signal Detection.
PhViD: an R package for PharmacoVigilance signal Detection.
Pharmacometric Power calculations for mixed study designs
Large-Scale Analysis of Pharmacogenomic Data
Analysis of Large-Scale Pharmacogenomic Data
Simulating and Conducting Phase 123 Trials
Simulates SPSO and Efftox Phase 12 Trials with Correlated
Outcomes
High-Throughput Phenotyping with EHR using a Common Automated
Pipeline
Unsupervised Gold-Standard Label Free Phenotyping Algorithm for
EHR Data
Automatic Phenotyping of Electronic Health Record at Visit
Resolution
Flexible Phenotype Simulation from Different Genetic and Noise
Models
Analyzing the Heterogeneity of Single-Cell Populations
Run Phoenix NLME and Perform Post-Processing
Marks periods of sleep in Actigraph accelerometer data
Rapid Calculation of Phylogenetic Information Content
A Fast, Flexible Tool for Sorting Phylogenetic Trees
Fast and Exact Algorithms for Computing Phylogenetic
Biodiversity Measures
Automatic Shift Detection using a Phylogenetic EM
Marks Periods of 'Bedrest' in Actigraph Accelerometer Data
Process Physical Activity Accelerometer Data
Process Accelerometer Data for Physical Activity Measurement
Bayesian Model to Find Changepoints Based on Rates and Count
Data
R front-end to PostgreSQL and Pivotal (Greenplum) database,
wrapper for MADlib
A Fast, Easy-to-use Tool for Manipulating Tables in Databases
and A Wrapper of MADlib
A Fast, Easy-to-Use Tool for Manipulating Tables in Databases
and a Wrapper of MADlib
Finding and Installing Packages Used in R and RMarkdown Files
Functions for Calculating Dodge Romig, MIL STD 105E and MIL STD
414 Acceptance Sampling Plan
Processing of the 'Planet NICFI' Satellite Imagery
Tumor Mutation Detection in Plasma using Barcoding
Visualization of Plasmid Profile Results
Optimal Two-Period Multi-Arm Platform Design
Optimal Two-Period Multiarm Platform Design with New
Experimental Arms Added During the Trial
Single-Cell Immune Repertoire and Gene Expression Analysis
Dynamic Updating Methods For Player Ratings Estimation
Dynamic Updating Methods for Player Ratings Estimation
Useful Networking Tools for Project Management
Creates an envelope that surrounds a set of points plotted in a
two dimensional space.
Finds the Price of Anarchy for Routing Games
Polynomial (ordinary differential equation) Model Search
Posterior Predictive (PoP) Design for Phase I Clinical Trials
Valid Post-Selection Inference for Linear LS Regression
PogromcyDanych / DataCrunchers is the Masive Online Open Course
that Brings R and Statistics to the People
DataCrunchers (PogromcyDanych) is the Massive Online Open Course
that Brings R and Statistics to the People
Classification and clustering of sequencing data based on a
Poisson model
Classification and Clustering of Sequencing Data Based on a
Poisson Model
Interpretation of Point Forecasts as State-Dependent Quantiles
and Expectiles
Fit Models Derived from Point Processes to Species Distributions
using 'inlabru'
Data Generation with Poisson, Binary and Continuous Components
Data Generation with Poisson, Binary and Ordinal Components
Generation of up to Four Different Types of Variables
Generation of Up to Four Different Types of Variables
Data Generation with Poisson, Binary, Ordinal and Normal
Components
Simultaneous Generation of Count and Continuous Data
Simultaneous generation of multivariate data with Poisson and
normal marginals
Simultaneous Generation of Multivariate Data with Poisson and
Normal Marginals
Exact and Approximate Implementations of the Poisson Binomial
Distribution
Efficient Exact and Approximate Implementations of the Poisson
Binomial Distribution
Efficient Computation of Ordinary and Generalized Poisson
Binomial Distributions
Significance analysis of sequencing data based on a Poisson log
linear model
Tools for Managing, Measuring and Visualizing Policy Portfolios
Interface to the Poloniex Cryptocurrency Trading API
Assignment of Haplotypes Based on SNP Dosages in Diploids and
Polyploids
Paternity Exclusion in Autopolyploid Species
Paternity exclusion in autopolyploid species
Pattern Oriented Modelling Information Criterion
Prevalence and Regression for Pool-Tested (Group-Tested) Data
Predict 10-Year Risk for Atherosclerotic Cardiovascular Disease
Pooled Mean Group Estimation of Dynamic Heterogenous Panels
PopED: Population (and individual) optimal Experimental Design
Population (and individual) optimal Experimental Design
Population (and Individual) Optimal Experimental Design
Useful functions for (batch) file conversion and data resampling
in microsatellite datasets
PopGen: A simple way to analyse and visualize population genetic
data
PopGenReport: A simple way to analyse and visualize population
genetic data
A Simple Framework to Analyse Population Genetic Data
A Simple Framework to Analyse Population and Landscape Genetic
Data
An efficient swiss army knife for population genetic & genomic
analysis
A swiss army knife for population genetic & genomic analysis
An Efficient Swiss Army Knife for Population Genomic Analyses
Genomic Breeding Tools: Genetic Variance Prediction and
Cross-Validation
Acceder Con R a Los Datos Del Portal De Hacienda
Portfolio Analysis, Including Numerical Methods for Optimization
of Portfolios
High Frequency Price Estimators by PortfolioEffect
High Frequency Portfolio Analytics by PortfolioEffect
Quotient of Random Variables Conditioned to the Positive
Quadrant
Non-Parametric Sampling with Parallel Monte Carlo
Computation of power and level tables for hypothesis tests.
Computation of Power and Level Tables for Hypothesis Tests
Power and Sample size distribution of 2-stage BE studies via
simulations
Power and Sample-size Distribution of 2-stage Bioequivalence
Studies
Power and Sample-Size Distribution of 2-Stage Bioequivalence
Studies
Power and Sample size based on two-one-sided-t-tests (TOST) for
BE studies
Power and Sample size based on two one-sided t-tests (TOST) for
bioequivalence studies
Power and Sample size based on two one-sided t-tests (TOST) for
(bio)equivalence studies
Power and Sample Size Based on Two One-sided t-Tests (TOST) for
(Bio)Equivalence Studies
Power and Sample Size Based on Two One-Sided t-Tests (TOST) for
(Bio)Equivalence Studies
Power and Sample Size for (Bio)Equivalence Studies
Power Analysis Tools for Individual/Cluster Randomized Trials
Power Analysis Tools for Multilevel Randomized Experiments
Statistical Test of Higher Order Intersections Among Multiple
Sets
Powerful Algorithm for Maximal Eigenpair
Tools for Designing and Weighting Survey Samples
Pre-Knitting Processing and Post HTML-Rendering Processing
Basic Functions for Pre-Processing Microarrays
Various Preprocessing Transformations of Numeric Data Matrices
Accurate Floating Point Sums and Products
Computational Prediction of Proteins Encoded by Circadian Genes
Test Bench for Comparison of Data Prediction Models
Prediction for Future Data from any Continuous Distribution
Prediction Intervals for Three Basic Statistical Models
Indeterminacy of Networks via Press Perturbations
PrevMap - an R package for prevalence mapping
Geostatistical Modelling of Spatially Referenced Prevalence Data
Calculating Bilateral and Multilateral Price Indexes
Prioritizing Cancer Drugs for Interested Cancer
Generates Prior Distributions for Proportions
Differentially private regularized logistic regression
Differentially Private Regularized Logistic Regression
PRO-CTCAE Data Management, Analysis, and Graphical Tools
PRO-CTCAE Scoring, Analysis, and Graphical Tools
Product Density Estimation for ICA using tilted Gaussian density
estimates
Product Density Estimation for ICA using Tilted Gaussian Density
Estimates
Fit Projected 2D Profiles to Galaxy Images
Biological Network Construction, Visualization and Analyses
Penalized Regression with Second-Generation P-Values
Manipulate and Play 'ProTracker' Modules
Probabilistic Weather Field Forecast using the GOP method
Probabilistic weather forecast using the GOP method
Computing Logit & Probit Predicted Probabilities & Marginal
Effects
Score Optimal Probabilistic Forecast Reconciliation
Probabilistic Sampling Design and Strategies
Inference for the Stress-Strength Model R = P(Y<X)
Reliability for gene expression from Affymetrix chip
Probit with Spatial Dependence, SAR and SEM Models
Probit with Spatial Dependence, SAR, SEM and SARAR Models
Profile Likelihood for a Parameter in Commonly Used Statistical
Models
Downloading and Exploring Data from the PROFOUND Database
support package for "Programming Graphical User Interfaces in R"
Management of Deterministic and Stochastic Projects
Automates the creation of new R statistical analysis projects.
Automates the creation of new R statistical analysis projects
Automates the creation of new statistical analysis projects.
Automates the Creation of New Statistical Analysis Projects
Calculates and Analyzes the Proliferative Index
Computes confidence intervals for single proportions, for
differences in proportions, for an odds-ratio and for the
relative risk in a 2x2 table
Computes confidence intervals for proportions, differences in
proportions, an odds-ratio and the relative risk in a 2x2 table
Various confidence interval methods for proportions
Various Confidence Interval Methods for Proportions
Propensity score methods for assigning treatment in randomized
trials
Propensity Score Methods for Assigning Treatment in Randomized
Trials
Treatment Effect Estimate in Strata with Missing Data
Generates Various Protein Descriptors for Machine Learning
Algorithms
Datasets and Functions Used in the Book 'Przewodnik po Pakiecie
R'
Several Local False Discovery Rate Estimators
Simulations of grouped responses relative to baseline.
Word Embedding Research Framework for Psychological Science
Performs simulation study to look for publication bias, using a
technique described by Ioannidis and Trikalinos; Clin Trials.
2007;4(3):245-53.
Sensitivity Analysis for Publication Bias in Meta-Analyses
Format Output of Various Routines in a Suitable Way for Reports
and Publication
A Unified Pipeline for Pupillometry Data
Bayesian Estimation of Tumor Purity and Clonality
Interpolating Age-Specific Mortality Rates at All Ages
Types and Features for Object Oriented Programming
Automatic Item Generator for Quantitative Multiple-Choice Items
Asymmetric Distributions and Quantile Estimation
Query the Breeding Management System 'BMS'
QCA - Qualitative Comparative Analysis for crisp sets
A Package for Qualitative Comparative Analysis
Qualitative Comparative Analaysis with R
Yet another package for Qualitative Comparative Analysis
Yet Another Package for Qualitative Comparative Analysis
Modern Functions for Qualitative Comparative Analysis
Tools for the Analysis of Clustered Data in QCA
Tests for Type I Error in Qualitative Comparative Analysis (QCA)
Professional Functionality for Performing and Evaluating
Qualitative Comparative Analysis
Advanced Functionality for Performing and Evaluating Qualitative
Comparative Analysis
Fast & Easy Quality Control of EWAS Results Files
Fast and Easy Quality Control of EWAS Results Files
Quality Control of Genome Wide Association Study results
Quality Control of Genome Wide Association Study Results
Sure Independence Screening via Quantile Correlation and
Composite Quantile Correlation
Modern Nonparametric Tools for Two-Sample Quantile and
Distribution Comparisons
Density, Cumulative and Quantile Functions of Quadratic Forms
Quantitative Fatty Acid Signature Analysis
Pricing of Vanilla and Exotic Option Contracts
Estimate Quantitative Genetics Parameters from Generalised
Linear Mixed Models
Construct Nomogram for Competing Risk Models
Quantity-Intensity Relationship of Soil Potassium
Estimate the Coefficients for Non-Convex Penalized Quantile
Regression Model by using QICD Algorithm
Reinforcement Learning using the Q Learning Algorithm
Differential Methylation Analysis with
Quadratic-Negative-Binomial Model
Differential RNA Methylation Analysis with
Quad-Negative-Binomial Model
Differential RNA Methylation Analysis for Count-Based
Small-Sample Sequencing Data with a Quad-Negative Binomial
Model
Model Validation using Quantile Spectral Analysis and Parametric
Bootstrap
Linearly Constrained Indefinite Quadratic Program Solver
Quasi-Potential Analysis for Stochastic Differential Equations
Permutation Based QQ Plot and Inflation Factor Estimation
A 'Shiny' Gadget for Interactive 'QRA' Visualizations
Quadratically Regularized Functional Canonical Correlation
Analysis
10-Year Cardiovascular Disease Risk Calculator (QRISK3 2017)
Provides R-language Code to Examine Quantitative Risk Management
Concepts
Provides R-Language Code to Examine Quantitative Risk Management
Concepts
Provides R-language code to examine Quantitative Risk Management
concepts
Provides R-language code to examine Quantitative Risk Management concepts
A Novel Quantile Regression Approach for eQTL Discovery
Quantile Regression in Varying-Coefficient Models
Quantitative Structure Activity Relationship (QSAR) Data Sets
QTL Genome-Wide Composite Interval Mapping
QTL Genome-Wide Composite Interval Mapping with Graphical User
Interface
Interactive software package for QTL visualization
Tools for mapping of quantitative traits of genetically related
individuals
Tools for mapping of quantitative traits of genetically related
individuals and calculating identity coefficients from a
pedigree
Tools for Mapping of Quantitative Traits of Genetically Related
Individuals and Calculating Identity Coefficients from
Pedigrees
Quantile-Optimal Treatment Regimes with Censored Data
Partitioning Uncertainty Components of an Incomplete Ensemble of
Climate Projections
Regularized sparse inverse covariance matrix estimation
Regularized Sparse Inverse Covariance Matrix Estimation
Estimate sparse inverse correlation matrix using regularization
Quantum Walk-Based Data Analysis and Prediction
Generalized Eigenvalues and QZ Decomposition
Approximation to the Survival Functions of Quadratic Forms of
Gaussian Variables
Quantile Autoregressive Distributed Lag Model
Quantile-Based Predictors for Survival Outcome
Scales Score Calculation from Quality of Life Data
Analysis of Health-Related Quality of Life in Oncology
Analysis of Health-Related Quality of Life in oncology
Block Bootstrap Methods for Quantile Regression in Time Series
This package offers a set of topological network measures to
analyze complex Networks structurally.
QuACN: Quantitative Analysis of Complex Networks
Constructing Quantitative Environment Sensor using
Transcriptomes
Quadratic Root for any Quadratic Equation
Mitigating the Adverse Impact of Batch Effects in Sample Pattern
Detection
Estimation of conditional quantiles using optimal quantization
Estimation of Conditional Quantiles using Optimal Quantization
Quantile Least Mahalanobis Distance Estimator for Tukey g-&-h
Mixture
Nonparametric Confidence Intervals for Quantiles
Clustering Mutations using High Throughput Sequencing (HTS) Data
Performs Common Linear Algebra Operations Used in Quantum
Computing
Performs Common Linear Algebra Operations Used in Quantum
Computing and Implements Quantum Algorithms
Comparison of Phylogenetic Trees Using Quartet and Bipartition
Measures
Comparison of Phylogenetic Trees Using Quartet and Split
Measures
Analyzing RNA Sequencing Count Tables Using Quasi-Likelihood
Analyzing RNA sequence count tables using quasi-likelihood
Analyzing RNA Sequence Count Tables Using Quasi-likelihood
ANALYZING RNA SEQUENCE COUNT TABLES USING QUASI-LIKELIHOOD
Processing Pipeline for 'SamBada' from Pre- To Post-Processing
Fast and light-weight caching of objects
Fast and light-weight caching (memoization) of objects and
results to speed up computations
Fast and Light-Weight Caching (Memoization) of Objects and
Results to Speed Up Computations
Fast and light-weight caching (memoization) of objects
Enhanced methods for handling graphical devices
Easy handling of and access to files organized in structured
directories
Easy Handling of and Access to Files Organized in Structured
Directories
Methods for accessing huge amounts of data
Methods for accessing huge amounts of data [DEPRECATED]
Methods for Accessing Huge Amounts of Data [deprecated]
Read and write of MAT files together with R-to-Matlab connectivity
Read and write of MAT files together with R-to-Matlab
connectivity
Read and write of MAT files together with R-to-MATLAB
connectivity
Read and Write MAT Files and Call MATLAB from Within R
Utility function for defining S3 methods
R object-oriented programming with or without references
R Object-Oriented Programming with or without References
Dynamic generation of scientific reports
Dynamic Generation of Scientific Reports
Estimation of R0 and real-time reproduction number from
epidemics
Estimation of R0 and real-time repdroduction number from
epidemics
Estimation of R0 and Real-Time Reproduction Number from
Epidemics
Compressive Sampling: Sparse signal recovery utilities
Compressive Sampling: Sparse Signal Recovery Utilities
R2 Measure of Explained Variation under the Additive Hazards
Model
Multistage Sampling Allocation and PSU Selection
Multistage Sampling Allocation and Sample Selection
Estimate Structured Additive Regression Models with BayesX
Estimate Structured Additive Regression Models with 'BayesX'
Multiple Peak Alignment for 2D Gas Chromatography Mass
Spectrometry Metabolomics Analysis
Translation of Base R-Like Functions for 'data.table' Objects
Converting R CRAN outputs into Google Earth.
Wrapper functions for GUESS: a GPU-enabled Sparse Bayesian
variable selection method for linear regression based analysis
of possibly multivariate/correlated outcomes.
Functions for exporting R objects in an HTML document
Simple R Interface to Microsoft PowerPoint using rcom.
Simple R Interface to Microsoft PowerPoint using rcom or
RDCOMClient.
Simple R Interface to Microsoft PowerPoint using RDCOMClient
A GTK GUI for fitting and comparing GLM and GLMM in R
A GTK GUI for Fitting and Comparing GLM and GLMM
Running WinBUGS and OpenBUGS from R / S-PLUS
Running 'WinBUGS' and 'OpenBUGS' from 'R' / 'S-PLUS'
R2jags: A Package for Running jags from R
Two Sample Problem Routines using Permutation
Goodness-of-Fit Tests for Capture-Recapture Models
Report Functions to Create HTML and PDF Files
Encapsulated Classes with Reference Semantics
R6 Reference Class Based Data Structures
Simulations for Response Adaptive Block Randomization Design
R Package for Phylogenetic Analysis of RADseq Data
Normalization and Study of Rank Abundance Distributions
Optimize the De Novo Stacks Pipeline via R
Random Approximate Elastic Net (RAEN) Variable Selection Method
Data fusion filters for Attitude Heading Reference System (AHRS)
with several variants of the Kalman filter and the Mahoney and
Madgwick filters.
Data Fusion Filters for Attitude Heading Reference System (AHRS)
with Several Variants of the Kalman Filter and the Mahoney and
Madgwick Filters
Genome-Wide Association Study with SNP-Set Methods
RAMClust: A Novel Feature Clustering Method Enables
Spectral-Matching Based Annotation for Metabolomics Data
Mass Spectrometry Metabolomics Feature Clustering and
Interpretation
Regularized Generalized Linear Models with Interaction Effects
Structural Equation Modeling using RAM Notation
Structural Equation Modeling using the reticular action model
(RAM) Notation
Structural Equation Modeling Using the Reticular Action Model
(RAM) Notation
Ranking of Nodes with Kernelized Score Functions
Fast Nearest Neighbour Search (wraps Arya and Mount's ANN
library)
Fast Nearest Neighbour Search (Wraps ANN Library) Using L2
Metric
Fast Nearest Neighbour Search (Wraps Arya and Mount's ANN
Library)
Fast Nearest Neighbour Search (Wraps ANN Library) Using L1
Metric
Reliable Accurate Prenatal non-Invasive Diagnosis R package
RAPIDR: Reliable Accurate Prenatal non-Invasive Diagnosis R
package
A R Interface to the US EPA Air Quality System Data Mart API
A Simple Interface to the US EPA Air Quality System Data Mart
API
Interfaces to Linux and AppArmor security methods.
Bindings to AppArmor and Security Related Linux Tools
Functions to import Arc/Info V7.x coverages and data
Functions to import data from Arc/Info V7.x binary coverages
Connect to 'AWS Athena' using 'Boto3' ('DBI' Interface)
Download Data from the Reserve Bank of New Zealand Website
Graded Matching for Large Observational Studies
R Wrapper for the Bit.ly, Ow.ly and Goo.gl API
An R Wrapper to the Overly Complicated 'Bitmoji' API
Continuous and discrete ancestral character reconstruction and
evolutionary rate tests.
Regression-Based Approach for Testing the Type of Missing Data
Calculation of the Integrated Flow of Particles between Polygons
Calculation of the Integrated Flow of Particles Between Polygons
Random Coefficient Binary Response Estimation
"Retained Component Criterion for Principal Component Analysis"
Fast 2D Constrained Delaunay Triangulation
RCEIM - R Cross Entropy Inspired Method for Optimization
R Cross Entropy Inspired Method for Optimization
Download and Open Data Provided by the Copernicus Global Land
Service
Manipulate Matrix Row and Column Labels with Ease
Tools for Manipulating and Summarizing CMIP5 Data
Random Coefficient Minification Time Series Models
Data and Functions for R Companion to Political Analysis 3rd Ed
Regions of common profiles modelling with mixtures-of-experts.
Regions of Common Profiles Modelling with Mixtures-of-Experts
An Integrated Regression Model for Normalizing 'NanoString
nCounter' Data
Airborne LiDAR Filtering Method Based on Cloth Simulation
Rank Constrained Similarity Learning for Single Cell RNA
Sequencing Data
Assign Treatments, Power Calculations, Balances, Impact
Evaluation of Experiments
Designing and Analyzing Two-Stage Randomized Experiments
Clustering Time Series While Resisting Outliers
Dose Rate Modelling of Carbonate-Rich Samples
Locating Distributional Changes in Highly Dependent Time Series
Post-Processing of the Markov Chain Simulated by ChronoModel
Post-Processing of the Markov Chain Simulated by ChronoModel or
Oxcal
A 'DBI' Interface to the 'Yandex Clickhouse' Database Providing
Basic 'dplyr' Support
'Yandex Clickhouse' Interface for R with Basic 'dplyr' Support
RClimMAWGEN (R Climate Index Multi-site Auto-regressive Weather
GENeretor): a package to generate time series of climate
indices from RMAWGEN generations.
Correct Bias in Estimated Regression Coefficients
'Httr' Implementation of the 'Coinmarketcap' API
Access to Cryptsy Crypto-Currency Exchange Public Information
API via R
General network (HTTP/FTP/...) client interface for R
General Network (HTTP/FTP/...) Client Interface for R
Different Tensor Factorization (Decomposition) Techniques for
RDF Tensors (Three-Mode-Tensors)
Importing real-time thermo cycler (qPCR) data from RDML format
files
Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format
Files
R Functions for Respondent-Driven Sampling
An R wrapper for the Data Science Toolkit API
RDS Sample Size Estimation and Power Calculation
R interface to the dieharder RNG test suite
R Interface to the 'DieHarder' RNG Test Suite
Robust Test for Complete Independence in High-Dimensions
Empirical Bayes Estimation and Inference in R
Empirical Bayes Estimation and Inference
Relevant Component Analysis for Supervised Distance Metric
Learning
Robust and Efficient Analysis using Control function approach,
of a Secondary Outcome
Automated Construction of R Data Packages from REDCap Projects
Extract 'REDCap' Databases into Tidy 'Tibble's
Regression Trees with Random Effects for Longitudinal (Panel)
Data
REGENT: Risk Estimation for Genetic and Environmental Traits
Risk Estimation for Genetic and Environmental Traits
Random Effects for the Identification of Differential Splicing
R interface to EPP-lab, a Java program for exploratory
projection pursuit.
R Interface to EPP-lab, a Java Program for Exploratory
Projection Pursuit
R Interface to EPP-Lab, a Java Program for Exploratory
Projection Pursuit
R Interface to 'EPP-Lab', a Java Program for Exploratory
Projection Pursuit
Reordering and/or Reflecting Factors for Simulation Studies with
Exploratory Factor Analysis
Robust Effect Size Index (RESI) Estimation
Companion Package to the Book “R: Einführung durch angewandte
Statistik”
Companion Package to the Book 'R: Einführung durch angewandte
Statistik'
Post Processing of (Half-)Hourly Eddy-Covariance Measurements
Reading Data from NetCDF Files for 'REddyProc'
Fitting Linear Models with Endogenous Regressors when No
External Instruments are Available
Fitting Linear Models with Endogenous Regressors using Latent
Instrumental Variables
Random Forest with Canonical Correlation Analysis
a family GWAS data-analysis tool that uses a generalized least
squares method to perform single-marker association analysis.
Rapid Feasible Generalized Least Squares
Graphics for Spherical Distributions and Earthquake Focal Mechanisms
Graphics for Spherical Distributions and Earthquake Focal
Mechanisms
Importance Measure and Selection for Groups of Variables with
Random Forests
Multivariate Analysis of Metabolomics Data using Random Forests
Merging of Satellite Datasets with Ground Observations using
Random Forests
RForcecom provides the connection to Force.com (Salesforce.com)
from R.
RForcecom provides the connection to the Force.com and
Salesforce.com from R.
RForcecom provides the connection to Force.com and
Salesforce.com from R.
Data Integration Feature for Force.com and Salesforce.com
Prediction Intervals with Random Forests and Boosted Forests
LS-TreeBoost and LAD-TreeBoost for Gene Regulatory Network
Reconstruction
Regularized Generalized Canonical Correlation Analysis
RGCCA and Sparse GCCA for multi-block data analysis
Regularized and Sparse Generalized Canonical Correlation
Analysis for Multiblock Data
Regularized and Sparse Generalized Canonical Correlation
Analysis for Multi-Block Data
Preprocessing and Multivariate Analysis of Bidimensional Gas
Chromatography Data
RGENERATE A tool for generation random variable time series
using the tools of 'vars' or 'RMAWGEN'
Tools To Generate Daily-Precipitation Time Series
Tools to Generate Daily-Precipitation Time Series
Generates Multivariate Nonnormal Data and Determines How Many
Factors to Retain
Unsampled Data in R for Google Analytics Premium Accounts
Data and Functions from the book R Graphics
Data and Functions from the book R Graphics, Second Edition
Data and Functions from the Book R Graphics, Second Edition
Data and Functions from the Book R Graphics, Third Edition
Estimate the "Gremlins in the Data" Model for Conjoint Studies
Data frame editor and dialog making wrapper for RGtk2
Benchmarks for High-Performance Computing Environments
Heart rate variability analysis of ECG data
Heart Rate Variability Analysis of ECG Data
Ryan-Holm Step-Down Bonferroni or Sidak Procedure
Regularized Hotelling's T-square Test for Pathway (Gene Set)
Analysis
Hidden Markov Models simulations and estimations
Identification of Hybrid Peptides in Immunopeptidomic Analyses
Randomization inference for treatment effects on a binary
outcome
Randomization Inference for Treatment Effects on a Binary
Outcome
Radiomics Image Analysis Toolbox for Grayscale Images
Radiomics Image Analysis Toolbox for Medial Images
Causal Inference and Prediction in Cohort-Based Analyses
Search Pubmed, Make bibliographic content analyzable
Benchmark Suite for Indirect Methods for RI Estimation
Drawing SVG Graphics to Visualize and Map Genome-Wide Data in
Idiograms
Drawing SVG Graphics to Visualize and Map Genome-Wide Data on
Idiograms
Read 'ImageJ' Region of Interest (ROI) Files
Read ImageJ Region of Interest (ROI) files
R Individual Specialization (RInSp) package
A Local Deployment Framework for Shiny Apps
An Installation Framework for Shiny Apps
C++ classes to embed R in C++ applications
C++ Classes to Embed R in C++ Applications
C++ Classes to Embed R in C++ (and C) Applications
Provides access to databases through the JDBC interface
Provides Access to Databases Through the JDBC Interface
Interface to 'JDemetra+' Seasonal Adjustment Software
Serialize R objects to JSON, JavaScript Object Notation
Serialize R Objects to JSON, JavaScript Object Notation
Semantic packaging tools for standard analytics
Reversible Jump MCMC for the analysis of CGH arrays.
Reversible Jump MCMC for the Analysis of CGH Arrays
Analysis of Data Acquired Using the Receiver Operating
Characteristic Paradigm and Its Extensions
Modeling, Analysis, Validation and Visualization of Observer
Performance Studies in Diagnostic Radiology
Analyzing Diagnostic Observer Performance Studies
Artificial Intelligence Systems and Observer Performance
A Fast Clustering Algorithm for High Dimensional Data Based on
the Gram Matrix Decomposition
Datasets from 'KEEL' for it Use in 'RKEEL'
Ridge Group Sparse Optimization Problem for Estimation of a Meta
Model Based on Reproducing Kernel Hilbert Spaces
A Genotype Calling Algorithm for Affymetrix SNP Arrays
Exact (Restricted) Likelihood Ratio tests for mixed and additive models.
Exact (Restricted) Likelihood Ratio tests for mixed and additive
models.
Exact (Restricted) Likelihood Ratio Tests for Mixed and Additive
Models
Estimates, Plots and Evaluates Leaf Angle Distribution
Functions, Calculates Extinction Coefficients
Monte-Carlo Methods for Simulating Luminescence Phenomena
Modelling Ordinary Differential Equations Leading to
Luminescence
Solving Ordinary Differential Equations to Understand
Luminescence
'Shiny' Applications for the R Package 'Luminescence'
Weighted Rasch Modeling and Extensions using Conditional Maximum
Likelihood
RMAWGEN (R Multi-site Auto-regressive Weather GENeretor): a
package to generate daily time series from monthly mean values
RMAWGEN (R Multi-site Auto-regressive Weather GENerator): a
package to generate daily time series from monthly mean values
RMAWGEN (R Multi-site Auto-regressive Weather GENerator), a
package to generate daily time series from monthly mean values
RMAWGEN (R Multi-site Auto-regressive Weather GENerator), a
package to generate daily time series of precipitation and
temperature from monthly mean values
Airborne LiDAR Filtering Method Based on Multiscale Curvature
Functionality to extract weather information from METAR reports.
Multiple Kernel Learning for Classification or Regression
Problems
Maximum Likelihood Principal Component Analysis
Connect R with MOA for Massive Online Analysis
Risk Management and Optimization for Portfolio Investment
Recursive Modified Pattern Search on Hyper-Rectangle
Recursive Modified Pattern Search on Simplex
RMRAINGEN (R Multi-site RAINfall GENeretor): a package to
generate daily time series of rainfall from monthly mean values
'Rcpp' Bindings to Native C++ Implementation of MS Numpress
Signal-Noise Separation in Random Matrices by using Eigenvalue
Spectrum Analysis
Distributions and Statistics from Random Matrix Theory
Distributions, Statistics and Tests derived from Random Matrix
Theory
Distributions, Statistics and Tests Derived from Random Matrix
Theory
Mappable Vector Library for Handling Large Datasets
Fit Multi-Modal Mallows' Models to ranking data.
Fit Multi-Modal Mallows' Models to Ranking Data
An R Package for Mediation Analysis Confidence Intervals
Mixture Models with Heterogeneous and (Partially) Missing Data
Minimal Interface of the C++ 'MixtComp' Library for Mixture
Models with Heterogeneous and (Partially) Missing Data
Utility Functions for 'MixtComp' Outputs
Database Interface and MySQL Driver for R
Database Interface and 'MySQL' Driver for R
Log-Linear Poisson Graphical Model with Hot-Deck Multiple
Imputation
RNA Secondary Structure Module Mining, Comparison and Plotting
RNA Secondary Structure Comparison and Module Mining
Axis2 libraries for use in the R environment.
EUtils libraries for use in the R environment.
Obtain, organize, and visualize NCEP weather data
Obtain, Organize, and Visualize NCEP Weather Data
Random Number Generation for Generalized Poisson Distribution
Random Number Generation for Generalized Poisson Distributions
Omnibus Test for Genetic Association Analysis using the Rank
Normal Transformation
Visualization of High-Throughput Data on Large-Scale Biological
Networks
Implement semantically rich I/O for NeXML format
Implement semantically rich I/O for the NeXML format
Semantically Rich I/O for the 'NeXML' Format
Entropy Based Method for the Detection of Significant Variation
in Gene Expression Data
Provides an interface to the agent-based modelling platform
NetLogo
Provides an interface to the agent-based modelling plattform
NetLogo
Provides an Interface to the Agent-Based Modelling Platform
NetLogo
Provides an Interface to the Agent-Based Modelling Platform
'NetLogo'
Tools for Analyzing Content Homogeneity and News Diffusion using
Computational Text Analysis
Tools for Comparing Text Messages Across Time and Media
Medical image registration using the NiftyReg library
Medical Image Registration Using the NiftyReg Library
Image Registration Using the NiftyReg Library
Image Registration Using the 'NiftyReg' Library
Estimation of prognostic or diagnostic capacity of microarray
data.
Construction of diagnostic or prognostic scoring system and
internal validation of its discriminative capacities based on
ROC curve and 0.633+ boostrap resampling.
Visualizing the performance of scoring classifiers.
Visualizing the Performance of Scoring Classifiers
Receiver Operating Characteristic Based Signature Identification
Aggregate Multiple ROC Curves into One Global ROC
Performance Assessment of Binary Classifier with Visualization
ROC Curve Inference with and without Covariates
Compute and Compare Diagnostic Test Statistics Across Groups
Time-dependent ROC curve estimation and adaptation to the
relative survival context
Time-Dependent ROC Curve Estimators and Expected Utility
Functions
Non-parametric estimation of ROC curves without Gold Standard
Test
Provides Access to Databases Through the ODBC Interface
Parameterized queries extension for RODBC
Parameterized Queries Extension for RODBC
'ROI' Optimization Problems Based on 'globalOptTests'
R Optimization Infrastructure: 'MIPLIB' 2010 Benchmark Instances
'ROI' Access to 'MIPLIB' 2010 Benchmark Instances
'ROI' Optimization Problems Based on 'NETLIB-LP'
'alabama' Plugin for the 'R' Optimization Infrastructure
'alabama' Plug-in for the 'R' Optimization Infrastructure
'Clp (Coin-or linear programming)' Plugin for the 'R'
Optimization Interface
'DEoptim' and 'DEoptimR' Plugin for the 'R' Optimization
Interface
'ECOS' Plugin for the 'R' Optimization Infrastructure
'HiGHS' Plugin for the 'R' Optimization Infrastructure
'ipop' Plug-in for the 'R' Optimization Interface
'lp_solve' Plugin for the 'R' Optimization Interface
'lp_solve' Plugin for the 'R' Optimization Infrastructure
'Multi-Solution' Binary Linear Problem Plugin for the 'R'
Optimization Interface
'Multi-Solution' Binary Linear Problem Plug-in for the 'R'
Optimization Interface
'NEOS' Plug-in for the 'R' Optimization Interface
'nloptr' Plug-in for the 'R' Optimization Infrastructure
'optimx' Plug-in for the 'R' Optimization Infrastructure
'osqp' Plugin for the 'R' Optimization Infrastructure
'qpOASES' Plugin for the 'R' Optimization Infrastructure
'quadprog' Plug-in for the 'R' Optimization Infrastructure
'SCS' Plugin for the 'R' Optimization Infrastructure
'SCS' Plug-in for the 'R' Optimization Infrastructure
'SYMPHONY' Plug-in for the 'R' Optimization Interface
Plots Surfaces of Rates of Mortality Improvement
R Object Oriented Programming for Statistical Distribution
Regression Optimized: Numerical Approach for Multivariate
Classification and Regression Trees
R-Interface to the observations Data Model from QUASHI
Store your observations: R-Interface to the Observations Data
Model from QUASHI
Data Mangement for Hydrology and Beyond Using the Observations
Data Model
Data Management for Hydrology and Beyond Using the Observations
Data Model
Helper Package for Installing OpenCV with R
Optimally robust estimation - old version
Optimally Robust Estimation - Old Version
Optimally robust estimation for regression-type models
Optimally Robust Estimation for Regression-Type Models
Matrix Reconstruction from a Few Entries
OCI based Oracle database interface for R
OCI Based Oracle Database Interface for R
Convenient Tools for Working with Oracle Databases
RPCLR (Random-Penalized Conditional Logistic Regression)
Random Projection Ensemble Clustering Algorithm
Gamma and Exponential Generalized Linear Models with Elastic Net
Penalty
Computation and Plots of Influence Functions for Risk and
Performance Measures
Estimates of Standard Errors for Risk and Performance Measures
Reduced Piecewise Exponential Estimate/Test Software
Graphical User Interface (GUI) for interactive R analysis sessions
Graphical User Interface (GUI) for interactive R analysis
sessions
Graphical User Interface (GUI) for Interactive R Analysis
Sessions
Reverse-Phase Protein Array Super Position and Concentration
Evaluation
Resolvable partially pairwise balanced design and Space-filling
design via association scheme
Reads, annotates, and normalizes reverse phase protein array
data
Reads, Annotates, and Normalizes Reverse Phase Protein Array
Data
DBI/RJDBC interface to PostgreSQL Database
Soil and Chemical Substance Emission and Transport Model
R interface to the PostgreSQL database system
R Interface to the 'PostgreSQL' Database System
R Interface to the 'Protocol Buffers' 'API' (Version 2 or 3)
R Interface to the Protocol Buffers API (v2 or v3)
R Interface to the Protocol Buffers API (Version 2 or 3)
Goodness of Fit Tests for High-Dimensional Linear Regression
Models
R interface to the wonderful Pushbullet service
R Interface to the Pushbullet Messaging Service
Quantum Entanglement of Bipartite System
Residual Randomization Inference for Regression Models
Reduced-Rank Multinomial Logistic Regression for Markov Chains
Linear Model Evaluation with Randomized Residuals in a
Permutation Procedure
Online Robust Reduced-Rank Regression Estimation
Randomized Response Techniques for Complex Surveys
Estimating Replication Rate for Genome-Wide Association Studies
Phylogenetic Ridge Regression Methods for Comparative Studies
Correlation and Regression Analyses of Randomized Response
Designs
Correlation and Regression Analyses for Randomized Response Data
Data related to the book "R Statistical Application Development
by Example"
SAGA Geoprocessing and Terrain Analysis in R
Resampling-Based Analysis of Geostatistical Data
Builds Empirical Remote Sensing Models of Water Quality
Variables and Analyzes Long-Term Trends
Handle R Requests from R Service Bus Applications with JSON
Payloads
Rao-Scott Cochran-Armitage by Slices Trend Test
Shadow-Test Approach to Computerized Adaptive Testing
Number of Newly Discovered Rare Species Estimation
Functions for Hierarchical Bayesian Estimation: A Flexible
Approach
Get Real-Time Meteorological Data in SMET Format
Neural Networks in R using the Stuttgart Neural Network
Simulator (SNNS)
Neural Networks using the Stuttgart Neural Network Simulator
(SNNS)
Efficient Score Statistics For Genome-Wide SNP Set Analysis
Efficient Score Statistics for Genome-Wide SNP Set Analysis
Database Agnostic Package to Generate and Process 'SQL' Queries
in R
SQL Server R Database Interface (DBI) and dplyr SQL Backend
SQL Server R Database Interface (DBI) and 'dplyr' SQL Backend
Math and String Extension Functions for RSQLite
Implementations of Semi-Supervised Learning Approaches for
Classification
Simulation of Supply Reservoir Systems using Standard Operation
Policy
An R SVG graphics device with dynamic tips and hyperlinks
An R SVG Graphics Device with Dynamic Tips and Hyperlinks
Random Sampling Association Rules from a Transaction Dataset
A seamless interface to perform parallel computation on linear algebra problems using the ScaLAPACK library.
A seamless interface to perform parallel computation on linear
algebra problems using the ScaLAPACK library.
Scelestial: Steiner Tree Based Single-Cell Lineage Tree
Inference
Package for analysis of Sequenom EpiTYPER Data
Siena - Simulation Investigation for Empirical Network Analysis
Adobe Analytics (Omniture) Reporting API
Hypothesis Testing Based on R-Size Biased Samples
Loading Facebook and Instagram Advertising Data from Smartly.io
Loading Facebook and Instagram Advertising Data from
'Smartly.io'
Download Socrata datasets as R data frames
Download 'Socrata' Data Sets as R Data Frames
Port of sofia-ml (http://code.google.com/p/sofia-ml/) to R
Solvers for Large Scale Eigenvalue and SVD Problems
Solvers for Large-Scale Eigenvalue and SVD Problems
Package for converting between attitude representations: DCM,
Euler angles, Quaternions, and Euler vectors.
Conversion Between Attitude Representations of DCM, Euler
Angles, Quaternions, and Euler Vectors
Access to the Digital Universe Data set API
Simulate and Develop Streaming Processing in [R]
Simulate and Develop Streaming Processing
A Convenience Interface for the Stripe Payment API
Supports Developing, Building and Deploying R Solution
Design and Analysis of Disease Surveillance Activities
RTAQ: Tools for the analysis of trades and quotes in R
Detecting Trait Clustering in Environmental Gradients
Tools for analyzing sales report files of iTunes Connect.
HMM-Based Model for Genotyping and Cross-Over Identification
Risk Tool Library - Trading, Risk, Analytic for Commodities
Risk Tool Library - Trading, Risk, 'Analytics' for Commodities
A XML-Based Testing Framework for Automated Component Tests of R
Packages
Automatic Text Classification via Supervised Learning
Functions for calculation of texture metrics for Grey Level
Co-occurrence Matrices
Measuring Information Flow Between Time Series with Shannon and
Renyi Transfer Entropy
Triangle - A 2D Quality Mesh Generator and Delaunay Triangulator
Diverse basic statistical and graphical functions
Diverse Basic Statistical and Graphical Functions
Diverse basic statistical and graphical functions accompanying
the french book 'Aide-memoire de statistique appliquee a la
biologie'
Diverse basic statistical and graphical functions accompanying
the French book 'Aide-memoire de statistique appliquee a la
biologie'
Testing and Plotting Procedures for Biostatistics
Fonctions diverses accompagnant l'ouvrage 'Aide-memoire de
statistique appliquee a la biologie'
Rare Variants Association Analyses with Family Data
Methods for Family-Based Rare-Variant Genetic Association Tests
Probability of Sharing Rare Variants among Relatives
Rare Variant Tests Using Multiple Regression Methods
Detects spatial outliers using a Random Walk on Bipartite Graph
Read and Manipulate Data from 'RiverWare'
R wrapper around the Yahoo! Weather, Google Weather and NOAA
APIs
an R package for plotting sequence logos
Interface for the 'Wildbook' Wildlife Data Management Framework
Lazy Search in R Packages, Task Views, CRAN, the Web. All-in-One
Download
Functions to Parse and Create XMCDA Files
Maximum Likelihood Shrinkage via Ridge or Least Angle Regression
Maximum Likelihood Shrinkage via Generalized Ridge or Least Angle Regression
Maximum Likelihood Shrinkage via Generalized Ridge or Least
Angle Regression
Maximum Likelihood Shrinkage using Generalized Ridge or Least
Angle Regression Methods
Maximum Likelihood Shrinkage using Generalized Ridge or Least
Angle Regression
R package provide functions to translate English words into
Chinese.
R Module for Working with the 'Zabbix API'
Partitioning of Individual Autozygosity into Multiple
Homozygous-by-Descent Classes
Robust Angle Based Joint and Individual Variation Explained
Random Projection Kernel Outlier Detector
Calculate Sketches using Random Projections to Reduce Large Data
Sets
Random Subspace Ensemble Classification and Variable Screening
Identification of Cell Types and Inference of Lineage Trees from
Single-Cell RNA-Seq Data
Nuclear Decay Data for Dosimetric Calculations - ICRP 107
Radon and Soil Gas Transport in 2D Porous Medium
Package for statistical age models analysis in optically
stimulated luminescence dating
Numeric routines for optical stimulated luminescence dating
Interactive Gadgets for Radial Visualization Approaches
Analysis of Large-Scale Radio-Genomic Data
Tools for plotting skew-T diagrams and winds profiles
Tools for plotting skew-T diagrams and wind profiles
Tools for Plotting Skew-T Diagrams and Wind Profiles
Project Multidimensional Data in 2D Space
A Wrapper of the 'JavaScript' Library 'agGrid'
Life History Metrics from Matrix Population Models
Analysis and Identification of Raman Spectra of Microplastics
Tools For Managing File/function Dependencies In R
Efficient Numerical Algorithm for Exact Inference in Meta
Analysis
Adaptive Estimation in the Linear Random Coefficients Models
Simulation and Analysis of Random Fields
Utilities for the Simulation and Analysis of Random Fields
Utilities for the Simulation and Analysis of Random Fields and
Genomic Data
Utilities for the Simulation and Analysis of Random Fields and
Genetic Data
Filtering and Randomly Sampling Real User-Agent Strings
Polynomially Bounded Rank Aggregation under Kemeny's Axiomatic
Approach
Aggregation of (Partial) Ordinal Rankings
Ranking Responses in a Single Response Question or a Multiple
Response Question
Model-based clustering for multivariate partial ranking data
Model-Based Clustering for Multivariate Partial Ranking Data
The Ranking Project: Visualizations for Comparing Populations
A Fast and Light Package to Compute Polygenic Risk Scores
Estimate the Water Influx into Hydrocarbon Reservoirs
Combinatorial and Statistical Analyses of Rare Events
Calculation of rarity indices for species and assemblages of
species
Calculation of Rarity Indices for Species and Assemblages of
Species
Robust tests for case-control genetic association studies
Routines for Solving Rate-Distortion Problems
Rationalizing Rational Expectations. Tests and Deviations
Rare Variant Analysis and Genetic Simulations
Raven Hydrological Modelling Framework R Support and Analysis
Raw Data Quality Control Tool for LC-MS System
Bayesian Change-Point Detection and Time Series Decomposition
Video Reading and Background Subtraction in Videos
Reading and Background Subtraction in Videos
RbioRXN - process Rhea and MetaCyc (BioCyc, EcoCyc) biochemical
reaction data
RbioRXN - process Rhea, KEGG, MetaCyc, Unipathway biochemical
reaction data
Process Rhea, KEGG, MetaCyc, Unipathway Biochemical Reaction
Data
Process Rhea, KEGG, MetaCyc, Unipathway biochemical reaction
data
Extensible, Parallelizable Implementation of the Random Forest
Algorithm
Cancer Registry Data Analysis and Visualisation
Loglinear Models in Capture-Recapture Experiments
Loglinear Models for Capture-Recapture Experiments
Calculation of 22 CAnonical Time-Series CHaracteristics
Microscopy Based Citometry Data Analysis Package
Microscopy Based Cytometry Data Analysis Package
Analytical Procedures in Support of Brazilian Public Sector
External Auditing
Conjugate gradient minimization of nonlinear functions with box
constraints
Conjugate Gradient Minimization of Nonlinear Functions
Conjugate Gradient Minimization of Nonlinear Functions with Box
Constraints
Title: R interface for the ChemCpp library
An R package for computing the similarity of molecules
Discrete Choice (Binary, Poisson and Ordered) Models with Random
Parameters
A Tool for Writing Cleaner, more Transparent Code
Graphical Toolbox for Clustering and Classification of Data
Frames
Rcmdr support for the introductory course at Temple University.
Rcmdr Plug-In for Business and Customer Analytics
R Commander Plug-in for Case 1 (Object Case) Best-Worst Scaling
R Commander Plug-in for Case 2 Best-Worst Scaling
R Commander Plug-in for Dichotomous Choice Contingent Valuation
R Commander Plug-in for Discrete Choice Experiments
R Commander Plugin for (industrial) Design of Experiments
R Commander Plugin for (Industrial) Design of Experiments
Plugin de R-Commander para el manual EACSPIR
Plugin de R-Commander para el Manual 'EACSPIR'
Rcmdr Evidence Based Medicine Plug-In package
Rcmdr Evidence Based Medicine Plug-in Package
Tools for sampling in European Health Examination Surveys (EHES)
R Commander Plug-in for the EZR (Easy R) Package
Graphically export objects to LaTeX or HTML
Graphically export output to LaTeX or HTML
R Commander Plug-in for Fuzzy Clustering Methods (Fuzzy C-Means
and Gustafson Kessel)
R Commander Plug-in for Fitting Generalized Waring Regression
Models
Rcmdr Plug-In for Kaplan-Meier Plot and Other Plots by Using the
ggplot2 Package
An Rcmdr Plug-In for Kaplan-Meier Plots and Other Plots by Using
the ggplot2 Package
An Rcmdr Plug-in for Kaplan-Meier Plots and Other Plots by Using
the ggplot2 Package
R Commander Plug-in for Data Visualization with 'ggplot2'
Graphical User Interface for Conducting Meta-Analyses in R
Rcmdr Plug-in for Meta-Analysis with Correlations (MAc)
Meta-Analysis with Correlations (MAc) Rcmdr Plug-in
Meta-Analysis with Mean Differences (MAd) Rcmdr Plug-in
R Commander Plug-In for statistics at NMBU
R Commander Plug-In for Statistics at NMBU
R Commander Plug-In for University Level Applied Statistics
R Commander Plug-in for University Level Applied Statistics
Some discrete exponential dispersion models: Poisson-Tweedie
R Commander Plug-in for Robust Principal Component Analysis
Rcmdr Receiver Operator Characteristic Plug-In package
Rcmdr Receiver Operator Characteristic Plug-In PACKAGE
Rcmdr Receiver Operator Characteristic Plug-in Package
R Commander Plug-in for Risk Demonstration
Rcmdr plugin for designing and analyzing single-case experiments
Rcmdr Plugin for Designing and Analyzing Single-Case Experiments
Rcmdr Plugin for Designing and Analyzing Single-case Experiments
RCommander Plugin for Teaching Statistical Methods
R Commander Plugin for Teaching Statistical Methods
R Commander Plug-in for the 'WorldFlora' Package
R Commander Plug-in for Repeated-Measures ANOVA
R Commander Plug-in for Complex Pearson Distributions
Adds menu items to produce mosaic plots and assoc plots to Rcmdr
Rcmdr Graphical POINT of view for questionnaire data Plug-In
Graphical POINT of view for questionnaire data Rcmdr Plug-In
Tools for sampling in Official Statistical Surveys
R Commander Plug-in for the survival Package
R Commander Plug-in for the 'survival' Package
'Rcmdr' Plugin for Alpha-Sutte Indicator 'sutteForecastR'
Graphical Integrated Text Mining Solution
Graphical user interface providing an integrated text mining
solution
Interface to Colombos Compendia using the exposed REST API
Interface to Colombos Compendia using the Exposed REST API
Utilities for using the 'COM(P)ADRE' Matrix Model Database
Rcpp R/C++ interface library and package template
Rcpp Interface to the APT Package Manager
'Rcpp' Interface to the APT Package Manager
Tools for Combinatorics and Computational Mathematics
High Performance Tools for Combinatorics and Computational
Mathematics
'Rcpp' Bindings for 'Annoy', a Library for Approximate Nearest
Neighbors
Rcpp Bindings for Annoy, a Library for Approximate Nearest
Neighbors
'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra
Library
Rcpp integration for Armadillo templated linear algebra library
Rcpp Integration for Armadillo Templated Linear Algebra Library
Rcpp Integration for the Armadillo Templated Linear Algebra
Library
Rcpp bindings for the Boost Date_Time library
'Rcpp' Bindings for the Boost Date_Time Library
Factor Big Integers with the Quadratic Sieve
Factor Big Integers with the Parallel Quadratic Sieve
'Rcpp' Integration for the 'Blaze' High-Performance C++ Math
Library
Read-Write Support for 'NumPy' Files via 'Rcpp'
Read-Write Support for NumPy Files via Rcpp
'Rcpp' Bindings for the 'Corpus Workbench' ('CWB')
Spatial Estimation and Prediction for Censored/Missing Responses
Examples using RcppClassic to interface R and C++
Examples using 'RcppClassic' to Interface R and C++
'C++' Header Files for Color Conversion and Color Mappings
Global optimization by differential evolution in C++
Global Optimization by Differential Evolution in C++
'date' C++ Header Library for Date and Time Functionality
'Rcpp' Integration of Additional Probability Distributions
Rcpp integration for the Eigen templated linear algebra library.
Rcpp Integration for the Eigen Templated Linear Algebra Library
'Rcpp' Integration for the 'Eigen' Templated Linear Algebra
Library
Compiles 'C++' Code using 'Rcpp', 'Eigen' and 'CppAD' to Produce
First and Second Order Partial Derivatives
Header-Only C++ Mathematical Optimization Library for
'Armadillo'
Examples using Rcpp to interface R and C++
Examples using 'Rcpp' to Interface R and C++
'Rcpp' Bindings for the 'Faddeeva' Package
Interface to the Google 'FarmHash' Family of Hash Functions
'Rcpp' Bindings for the 'fast_float' Header-Only Library for
Number Parsing
Rcpp integration for GNU GSL vectors and matrices
Rcpp Integration for GNU GSL Vectors and Matrices
'Rcpp' Integration for 'GNU GSL' Vectors and Matrices
'Rcpp' Interface for Querying System Configuration Variables
'Rcpp' Bindings for 'hnswlib', a Library for Approximate Nearest
Neighbors
Iterator Based Expression Template Expansion of Standard
Operators
Solves Minimum Cost Bipartite Matching Problems
'Rcpp' Integration for the 'MLPACK' Library
'MsgPack' C++ Header Files and Interface Functions for R
'Rcpp' Package Illustrating Header-Only Access to 'NLopt'
'Rcpp' Integration for Numerical Computing Libraries
Seamless Interface to Octave -- and Matlab
Seamless Interface to Octave -- And Matlab
An interruptible progress bar with OpenMP support for c++ in R
packages
An Interruptible Progress Bar with OpenMP Support for C++ in R
Packages
R Bindings to the 'Quantuccia' Header-Only Essentials of
'QuantLib'
R Bindings to the Calendaring Functionality of 'QuantLib'
Rcpp bindings for Redis using the hiredis library
'Rcpp' Bindings for 'Redis' using the 'hiredis' Library
Fast rolling functions through Rcpp and RcppArmadillo
Rcpp bindings for Sequential Monte Carlo
Rcpp Bindings for Sequential Monte Carlo
R Interface to the Shark Machine Learning Library
'Rcpp' Bindings for the 'simdjson' Header-Only Library for
'JSON' Parsing
R and C++ Interfaces to 'spdlog' C++ Header Library for Logging
Rcpp Integration of the Streamulus DSEL for Stream Processing
'Rcpp' Integration of the 'Streamulus' 'DSEL' for Stream
Processing
Rcpp-Based Truncated Normal Distribution RNG and Family
Rcpp Bindings to Parser for Tom's Obvious Markup Language
'Rcpp' Bindings to Parser for Tom's Obvious Markup Language
Rcpp integration of different Ziggurat Normal RNG
implementations
'Rcpp' Integration of Different "Ziggurat" Normal RNG
Implementations
R interface to the CSDP semidefinite programming library
R Interface to the CSDP Semidefinite Programming Library
Styling of Graphics using Cascading Style Sheets
Concentration-Response Data Analysis using Curvep
Convert Rd to roxygen documentation and utilities to enhance
roxygen
Convert Rd to roxygen documentation and utilities to improve
documentation
DCA Tools for Decline Rate Analysis and EUR Forecast
A Collection of Functions to Experiment Dice Rolls
Dimension Reduction and Estimation Methods
Analyses for Distance-Sampling and Abundance Estimation
Distance-Sampling Analyses for Density and Abundance Estimation
Update and Manipulate Rd Documentation Objects
Update and manipulate Rd documentation objects
Univariate and Multivariate Damped Random Walk Processes
R Interface to DSDP Semidefinite Programming Library
Data Transforming Augmentation for Linear Mixed Models
Redundancy Control in Pathways databases
Predict Dominant Direction of Reactions of a Biochemical Network
Functions from "Reinsurance: Actuarial and Statistical Aspects"
Reactive transport modelling in 1D, 2D and 3D
Reactive Transport Modelling in 1d, 2d and 3d
Access old data saved in fixed-width format based on ISI-formatted codebooks.
Automated access to old World Fertility Survey data saved in
fixed-width format based on ISI-formatted codebooks.
Automated access to old World Fertility Survey data saved in fixed-width format based on ISI-formatted codebooks.
Read ESA SNAP Processed Raster Format in R
Monotonize point and interval functional estimates by
rearrangement
Monotonize Point and Interval Functional Estimates by
Rearrangement
Recursive Mining for Frequent Pattern and Confident Association
Rules
Ecocrop: Estimating Environmental Suitability for Plants
Estimating Environmental Suitability for Plants
Record Linkage Functions for Linking and Deduplicating Data Sets
Inference Tools Based on Record Statistics
Inference Tools in Time Series Based on Record Statistics
The Container for the DockerParallel Package
EWAS using reference-Free DNA methylation mixture deconvolution
EWAS using Reference-Free DNA Methylation Mixture Deconvolution
Straightforward 'BibTeX' and 'BibLaTeX' Bibliography Management
Import and Manage BibTeX and BibLaTeX references with RefManager
Straightforward BibTeX and BibLaTeX Bibliography Management
Cluster analysis via regression coefficients.
Regression Kink with a Time-Varying Threshold
Information Preserving Regression-Based Tools for Statistical
Disclosure Control
Expander Functions for Generating Full Gradient and Hessian from
Single- and Multi-Slot Base Distributions
Expander Functions for Generating Full Gradient and Hessian from
Single-Slot and Multi-Slot Base Distributions
Regularized Simultaneous Component Based Data Integration
Maximum Likelihood Estimation of Relatedness using EM Algorithm
Explore the UK's National Power Grid Datasets
Functions for estimating parameters in software reliability models
Tools for structural reliability analysis
Tools for Structural Reliability Analysis
Renewal method for extreme values extrapolation
Renewal Method for Extreme Values Extrapolation
Interface to Allow Full Use of the Environment Modules System
for Unix
Reordering the dendrogram according to the class labels
Reordering the Dendrogram According to the Class Labels
Empirical Orthogonal Teleconnections in R
Calculation of Mortgage Plan or Repayment Plan
GWAS for Multiple Observations on Related Individuals
Detection of global group effect in microarrays data
Global tests for expression data of high-dimensional sets of
molecular features.
Statistical Metrics for Multisite Replication Studies
Test Replications by Means of the Prior Predictive p-Value
Design and Analysis of Replication Studies
Replication Timing Profiling using DNA Copy Number
Generates a Project and Repo for Easy Initialization of a
Workshop
Microsoft Word, Microsoft Powerpoint and HTML documents
generation from R
Microsoft Word, Microsoft Powerpoint and HTML Documents
Generation
Microsoft Word and PowerPoint Documents Generation
Microsoft Word, Microsoft PowerPoint and HTML Documents
Generation
External jars required for package ReporteRs
External Jars Required for Package 'ReporteRs'
Installing and Loading R Packages for Reproducible Workflows
"Resolvable Partially Balanced Incomplete Block Designs
(PBIBDs)"
Retrieving Publications from PubMed Database Based on User Query
Using GUIs to help teach statistics to non-statistics students
electrical properties of resistor networks
Electrical Properties of Resistor Networks
Resource Selection (Probability) Functions for Use-Availability
Data
Visualization and Post-Processing of 'RevBayes' Analyses
A Light-Weight, Portable Tool for Reviewing Individual Patient
Records
Multiple Imputation using Chained Random Forests
A Collection of Efficient and Extremely Fast R Functions
A Collection of Efficient and Extremely Fast R Functions II
Varying stimulus coefficient fMRI models in R
Random Forests, Linear Trees, and Gradient Boosting for
Inference and Interpretability
A 'FRACTRAN' Interpreter and Some Helper Functions
Bayesian Hierarchical Modeling and Frequentist Method Check
Gaussian, Poisson, and Binomial Hierarchical Modeling
Hierarchical Modeling and Frequency Method Checking on
Overdispersed Gaussian, Poisson, and Binomial Data
Global Historical Climate Network Version 3
Provides plotting capabilities for R graph objects
Calculating multilocus heterozygosity and
heterozygosity-heterozygosity correlation
An R package for High-Performance Computing
Permits *apply() Style Dispatch for 'HPC'
Control the number of threads on BLAS for R
Classification and Analysis Package for Microbial Community Profiles
Data Extraction for People's Republic of China Resident Identity
Card
Enrichment for Diseases in a Set of Genes
R Package for Ridge Fusion in Statistical Learning
Ridit Analysis (An extension of the Kruskal-Wallis Test.)
Functions and C++ Header Files for Computation on Manifolds
Inference, Learning, and Optimization on Grassmann Manifold
Tools for Inference, Learning, and Optimization on Stiefel
Manifold
Inference, Learning, and Optimization on Stiefel Manifold
Learning with Data on Riemannian Manifolds
Ruuid: Provides small integer group functions
Rigroup: Provides small integer group functions
ILO Open Data via Ilostat Bulk Download Facility or SDMX Web
Service
An Implementation of the 'Instagram' API Using Tidy Principles
Data Analysis and Parameter Estimation Using Item Response
Theory
Computes 26 Financial Risk Measures for Any Continuous
Distribution
Automated Transformations, Normality Testing, and Reporting
Isothermal Titration Calorimetry (ITC) Data Analysis
Load Estimation of River Compounds with Different Methods
In Vitro in Vivo Correlation Linear Level "A"
In vitro in vivo correlation linear level A
R messaging using Apache ActiveMQ and jms
R interface of the Gateway to Advanced and User-friendly
Statistics Service
Topological Analysis of Knotted Proteins, Biopolymers and 3D
Structures
Functions and Datasets Required for ST370 class
Functions and Datasets Required for ST370 Class
Data exchange between R and LabKey Server
Data Exchange between R and LabKey Server
Data Exchange Between R and LabKey Server
Data Exchange Between R and 'LabKey' Server
Bayesian LDA for Mixed-Membership Clustering Analysis
Bayesian Exponential Smoothing Models with Trend Modifications
Ensemble Empirical Mode Decomposition (EEMD) and Its Complete
Variant (CEEMDAN)
Iterative Solvers for (Sparse) Linear System of Equations
R parallel implementation of Local Outlier Factor(LOF)
R Parallel Implementation of Local Outlier Factor(LOF)
MAGIC - Markov Affinity-Based Graph Imputation of Cells
Continuous Optimization using Memetic Algorithms with Local
Search Chains (MA-LS-Chains) in R
Detect Marine Heat Waves and Marine Cold Spells
Estimate Original Hydrocarbon in Place and Reservoir Performance
Rmetrics - Financial Engineering and Computational Finance
Supervised, Unsupervised, Semi-Supervised Classification with
MIXture MODelling (Interface of MIXMOD Software)
Combining Mixture Components for Clustering
Graphic Visualization of the Birds' Molt
R MPFR - Multiple Precision Floating-Point Reliable
Interface (Wrapper) to MPI (Message-Passing Interface)
Using graphs as a navigational infrastructure.
Using Graphs as a Navigational Infrastructure.
Using Graphs as a Navigational Infrastructure
Some image data used in the RnavGraph package demos
Image Data Used in the Loon Package Demos
Build and Grade Multiple Choice Exams with Randomized Content
Resistance Relationship Networks using Graphical LASSO
A Wrapper of the 'JavaScript' Library 'Nightly'
Perform the Complete Processing of a Set of Proton Nuclear
Magnetic Resonance Spectra
Interface to the Numerai Machine Learning Tournament API
An Incomplete Wrapper of the 'nvd3' JavaScript Library
Interpolation Grids for Packages of the 'RobASt' - Family of
Packages
Optimally Robust Estimation for Extreme Value Distributions
Robust Bootstrap Forecast Densities for GARCH Models
Innovative and/or Additive Outlier Robust Kalman Filtering
Optimally robust influence curves for location and scale
Optimally robust influence curves and estimators for location
and scale
Optimally Robust Influence Curves and Estimators for Location
and Scale
Infinitesimally robust estimators for preprocessing omics data
Infinitesimally Robust Estimators for Preprocessing -Omics Data
Periodogram methods for irregularly sampled time series
(especially light curves occurring in astroparticle physics)
and periodicity detection methods
Robust periodogram methods for irregularly sampled time series
and robust periodicity detection methods
Robust Periodogram and Periodicity Detection Methods
Robust Regularized Singular Value Decomposition
Optimally robust influence curves for regression and scale
Optimally Robust Influence Curves for Regression and Scale
Interface for the RobinHood.com No Commission Investing Platform
Generation of Dynamic Coappearance Matrices Within Texts
Truncated Maximum Likelihood fit and Robust Accelerated Failure
Time regression for Gaussian and logWeibull case.
Truncated Maximum Likelihood fit and Robust Accelerated Failure
Time regression for Gaussian and log-Weibull case.
Truncated Maximum Likelihood Fit and Robust Accelerated Failure
Time Regression for Gaussian and Log-Weibull Case
Robust One-Way ANOVA Tests under Heteroscedasticity and
Nonnormality
Robust Solution to the Behrens-Fisher Problem
Robust Calibration of Imperfect Mathematical Models
Robust Mixture Modeling Fitted via Spatial-EM Algorithm for
Model-Based Clustering and Outlier Detection
Robust Gaussian Stochastic Process Emulation
Robust Instrumental Variable Methods in Linear Models
Semi-Automated Marketing Mix Modeling (MMM) from Meta Marketing
Science
Wrapper Functions for 'ODAM' (Open Data for Access and Mining)
Web Services
Identify Rogue Taxa in Sets of Phylogenetic Trees
Subroutines to Estimate Rolling Window Multiple Correlation
Read and Search Interface to the 'HL7 FHIR' REST API
Finds roots, extrema and inflection points of a curve
Finds Roots, Extrema and Inflection Points of a Curve
Extended Rosenbrock-Type Densities for Markov Chain Monte Carlo
(MCMC) Sampler Benchmarking
Simplification of Decision Tables using Rough Sets
Data Analysis Using Rough Set and Fuzzy Rough Set Theories.
Data Analysis Using Rough Set and Fuzzy Rough Set Theories
Workbook-style, web-based interface to R
Interact with the 'PADRINO' IPM Database
Read, write, visualize and manipulate PDB files
Read, Write, Visualize and Manipulate PDB Files
Tools for Chromatographic Column Characterization and Modelling
Chromatographic Peak
Phylogenetic Comparative Tools for Missing Data and
Within-Species Variation
'Pipedrive API's' Functions to Improvement and Integration's
Systems
Bayes Estimation of Latent Class Mixed Multinomial Probit Models
WOE Transformation and Scorecard Builder
Estimate the PVT Properties of Reservoir Fluids
Quantitative Evaluation of the Native Fertility of Tropical
Soils
Connecting R and 'Raven' Sound Analysis Software
Generate Physical Random Numbers on Intel CPUs with the RdRand
instruction
'DRNG' on Intel CPUs with the 'RdRand' Instruction for R
Generate Two- And Three-Phase Relative Permeability Estimates
Extension of 'lixoftConnectors' for 'Simulx'
Linking R with the Open-Source 'SAGA-GIS' Software
MCMC Sampling of Gene Genealogies Conditional on Genetic Data
Ports the Workflow of "Resampling Stats" Add-in to R
Deploys Multiple 'Shiny' Apps using Configuration File
SGF (Smart Game File) File Format Import
Total Mediation Effect Size Measure (R-Squared Measure) under
Moderate or High-Dimensional Mediator Settings
A collection of methods for singular spectrum analysis
A Collection of Methods for Singular Spectrum Analysis
Interface to Snowball implementation of Porter's word stemming
algorithm.
STG : Feature Selection using STochastic Gates
Tools to Read and Manipulate Fisheries Data
Suite of Nonlinear Differential Algebraic Equations Solvers in R
Robust Estimation of the Proportion of Treatment Effect
Explained by Surrogate Marker Information
Summarizes Text by Extracting Relevant Sentences
Truncated Newton Function Minimization with Bounds Constraints
Data Analysis Tools over Space of Phylogenetic Trees Using
Tropical Geometry
T-Distributed Stochastic Neighbor Embedding using Barnes-Hut
Implementation
T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut
Implementation
T-distributed Stochastic Neighbor Embedding using Barnes-Hut
implementation
Shiny Apps for Plotting and Exploratory Analysis
The R Implementation of the 't-walk' MCMC Algorithm
Runiversal - Package for converting R objects to Java variables
and XML.
R interface to the UNU.RAN random variate generators
R Interface to the UNU.RAN Random Variate Generators
R Interface to the 'UNU.RAN' Random Variate Generators
A GUI for the UNU.RAN random variate generators
A GUI for the UNU.RAN Random Variate Generators
Manipulations of Triangular Meshes Based on the VCGLIB API
Manipulations of triangular meshes (smoothing, quadric edge
collapse decimation, im- and export of various mesh
file-formats, cleaning, etc.) based on the VCGLIB API.
Manipulations of Triangular Meshes Based on the 'VCGLIB' API
Manipulations of triangular meshes (smoothing, quadric edge
collapse decimation, im- and export of PLY-files, etc.) based
on the VCGLIB API.
Variable metric nonlinear function minimization with bounds
constraints
Variable Metric Nonlinear Function Minimization
Calculates the Distance Between Voter and Multiple Polling
Locations
Random Walk Clustering on Weighted Graphs
Sweave Drivers with Extra Tricks Up their Sleeve
R x C Ecological Inference With Optional Incorporation of Survey
Information
'R x C Ecological Inference With Optional Incorporation of
Survey Information'
Facilities for Simulating from ODE-Based Models
Functions to Compute Chemical Reaction Similarity
Queries and Extracts Images from Extensible Neuroimaging Archive
Toolkit Public/Private Datasets
R interface to the yacas computer algebra system
R Interface to the Yacas Computer Algebra System
R Interface to the 'Yacas' Computer Algebra System
Legacy 'Ryacas' (Interface to 'Yacas' Computer Algebra System)
GUI Tool for Data Management like SPSS or Stata
Spatial Two Stage Least Squares Estimation
SA Counterparty Credit Risk under Basel III
Stability Analysis in Differentially Expressed Genes
Species Abundance Distributions with Independent-Species
Assumption
A Stacked Autoencoder Implementation with Interface to
'neuralnet'
Mixed Effect Random Forests for Small Area Estimation
Shape Analysis for AI-Reconstructed Images
Software for the Analysis of Genetic Architecture
Clustering via Stochastic Approximation and Gaussian Mixture
Models
Elastic Net and (Adaptive) Lasso Penalized Sparse Asymmetric
Least Squares (SALES) and Coupled Sparse Asymmetric Least
Squares (COSALES) using Coordinate Descent and Proximal
Gradient Algorithms
The (Adaptive) Elastic Net and Lasso Penalized Sparse Asymmetric
Least Squares (SALES) and Coupled Sparse Asymmetric Least
Squares (COSALES) using Coordinate Descent and Proximal
Gradient Algorithms
Selection and Misclassification Bias Adjustment for Logistic
Regression Models
Stochastic Approximation Monte Carlo (SAMC) Sampler and Methods
A Semi-Supervised Method for Prediction of Phenotype Event Times
Sensitivity Assessment to Unmeasured Confounding with Multiple
Treatments
Stochastic Augmentation of Matched Data Using Restriction
Methods
Sensitivity Analysis of a Meta-analysis with Unpublished but
Registered Analytical Investigations
Network-based Interpretation of Changes in Compositional Data
Network-Based Interpretation of Changes in Compositional Data
XML Output Functions for Easy Creation of Moodle Questions
Import ASCII files directly into R using only a SAS input script
Import ASCII Files Directly into R using Only a 'SAS' Input
Script
Data sets from "SAS System for Mixed Models"
This package implements the SAVE approach for Computer Models
Bayesian emulation, calibration and validation of computer
models
Bayesian Emulation, Calibration and Validation of Computer
Models
Single-Cell RNA-Seq Gene Expression Recovery
Inference and Learning in Stochastic Automata
Search Best ARIMA, GARCH, and MS-GARCH Model
Structural Bayesian Information Criterion for Graphical Models
Inference for a Generalised SBM with a Split Merge Sampler
Detecting structural breaks using rectangle covering
(non-parametric method).
Satorra-Bentler Scaled Chi-Squared Difference Test
Estimation of the Proportion of SB Explained by Confounders
Scalable Bayes with Median of Subset Posteriors
Spatial Clustering with Hidden Markov Random Field using
Empirical Bayes
Summary based Conditional Association Test
Summary Based Conditional Association Test
Identifies Mean, Variance, and Hierarchically Clustered
Biclusters
Simultaneous Confidence Bands for the Mean of Functional Data
Stochastic Complexity-Based Conditional Independence Test for
Discrete Data
Stellar CharactEristics Pisa Estimation gRid
Stellar CharactEristics Pisa Estimation gRid for Binary Systems
Single Cell Entropy Analysis of Gene Heterogeneity in Cell
Populations
Supervised Component Generalized Linear Regression (SCGLR)
Supervised Component Generalized Linear Regression
Standardized Climate Indices such as SPI, SRI or SPEI
Standardized Climate Indices Such as SPI, SRI or SPEI
Single-Cell Integrator and Batch Effect Remover
A Semi-Supervised Category Identification and Assignment Tool
Score Projection Between in 'Vivo' and in 'Vitro' Datasets
SCORER 2.0: an algorithm for distinguishing parallel dimeric and
trimeric coiled-coil sequences
Semi-Supervised Calibration of Risk with Noisy Event Times
Single Cell Oriented Reconstruction of PANDA Individual
Optimized Networks
Inferring Developmental Chronologies from Single-Cell RNA
Sequencing Data
Shrinking Characteristics of Precision Matrix Estimators
An Accurate Simulator for Single-Cell RNA Sequencing Data
Performs Bayesian Variable Selection on the Covariates in a
Semi-Competing Risks Model
Functions for Planning and Managing Inventories in a Supply
Chain
Generate Publication Ready Visualizations of Single Cell
Transcriptomics Data
Extensions for Synthetic Controls Analysis
Spatially Discrete Approximation to Log-Gaussian Cox Processes
for Aggregated Disease Count Data
Datasets and Functions for "Sampling: Design and Analysis"
Datasets and Functions for 'Sampling: Design and Analysis, 3rd
Edition'
Calculate the third-order accurate Unbiased P-values via Speedy
double bootstrap method
Shortcuts, Detours and Dead Ends (SDDE) Path Types in Genome
Similarity Networks
Subgroup Discovery with Evolutionary Fuzzy Systems in R
Subgroup Discovery with Evolutionary Fuzzy Systems
Filtering and Assessing Sample Size of Tracking Data
Filtering and Assessing the Sample Size of Tracking Data
Tools for processing data associated with species distribution
modelling exercises.
Species Distribution Modelling Tools: Tools for processing data
associated with species distribution modelling exercises
Species Distribution Modelling Tools: Tools for processing data
associated with species distribution modelling exercises.
Visualizing the Standard Deviation as the Size of a Prism
Integrated methodology for the identification of homogeneous
profiles in data distribution
Integrated methodology for the identification of homogeneous
subtypes in data
Spatially Balanced Samples of Spatial Objects
Spatially Balanced Sample Draws for Spatial Objects
Standard errors of estimated genetic parametes
Splicing Efficiency Analysis and Annotation
Scalable Exact Algorithm for Large-Scale Set-Based GxE Tests
Scalable Exact Algorithm for Large-Scale Set-Based
Gene-Environment Interaction Tests
Score Equity Assessment- summary index computation
Statistical Estimation of Cluster Parameters (SECP)
Statistical Estimation of Cluster Parameters
reading and writing SEER*STAT data files
SEER and Atomic Bomb Survivor Data Analysis Tools
Spatial Exposure-Hazard Model for Exposure and Impact Assessment
on Exposed Individuals
A Structural Equation Embedded Likelihood Framework for Causal
Discovery
Identifiability of linear structural equation models
Identifiability of Linear Structural Equation Models
Network Analysis and Causal Inference Through Structural
Equation Modeling
A Tool for Sensitivity Analysis in Structural Equation Modeling
Space Filling Based Tools for Data Mining
Spatial Graph based Clustering Summaries for spatial point patterns
Spatial Graph based Clustering Summaries for spatial point
patterns
Spatial Graph Based Clustering Summaries for Spatial Point
Patterns
Fit a GLM (or cox model) with a combination of lasso and group
lasso regularization
Fit a GLM (or Cox Model) with a Combination of Lasso and Group
Lasso Regularization
Student Growth Percentile and Percentile Growth Projection/Trajectory Functions
Student Growth Percentile and Percentile Growth
Projection/Trajectory Functions
SGP: An R Package for the Calculation and Visualization of
Student Growth Percentiles.
An R Package for the Calculation and Visualization of Student
Growth Percentiles.
An R Package for the Calculation and Visualization of Student
Growth Percentiles & Percentile Growth Trajectories.
Student Growth Percentiles & Percentile Growth Trajectories
Exemplar Data Sets for Student Growth Percentiles (SGP) Analyses
Tools to Support the Sheffield Elicitation Framework (SHELF)
Tools to Support the Sheffield Elicitation Framework
SHrinkage covariance Incorporating Prior knowledge
Systematic Identification of Bimodally Expressed Genes Using
RNAseq Data
Subgroup Identification Based on Differential Effect Search
Similarity Identification in Gene Expression
Statistical Inference in High Dimensional Regression
Calculate ANSI S3.5-1997 Speech Intelligibility Index
Statistical Inference of Large-Scale Gaussian Graphical Model in
Gene Networks
Simultaneous Inference for Linear Models
Boosting Method for High-Dimensional Error-Prone Data
Set-Based Inference for Multiple Interval-Censored Outcomes
Subnetwork Integration for Multi-Modal Signatures
Multiple Regression and Moderated Regression Made Simple
A SINful Approach to Selection of Gaussian Graphical Markov Models
A SINful Approach to Selection of Gaussian Graphical Markov
Models
Estimate sparse dynamic graphs using the Smooth Incremental
Graphical Lasso Estimation (SINGLE) algorithm
Collection of Household Survey Packages Conducted by IBGE
Finding Feedback Effects in SEM and Testing for Their
Significance
Compartmental Susceptible-Infectious-Recovered (SIR) Model of
Community and Household Infection
Sliced Inverse Regression with Thresholding
Sparse Interval Sliced Inverse Regression
Select Intervals Suited for Functional Regression
A Spatial Model of Intra-Tumor Heterogeneity
Statistical Inference for Enzyme Kinetics
Segment-Based Ordinary Kriging and Segment-Based Regression
Kriging for Spatial Prediction
SNP-set (Sequence) Kernel Association Test
SNP-Set (Sequence) Kernel Association Test
A Super K-Nearest Neighbor (SKNN) Classification Algorithm
Statistical Learning for Big Dependent Data
Serial Limiting Dilution Assay Statistics
Software for Analyzing Limiting Dilution Assays
Statistical Learning Based Estimation of Mutual Information
Sparse Logistic Functional Principal Component Analysis
Maximin-Distance (Sliced) Latin Hypercube Designs
Selective Locally Linear Inference of Cellular Expression
Relationships
Single Cell Linkage by Distance Estimation is SLIDE
Stepwise Linear Models for Binary Classification Problems under
Youden Index Optimisation
Scalable and Robust Latent Trajectory Class Analysis
Miscellaneous Functions for analysis of gene expression data at SIRS-Lab GmbH
Sequential Multiple Assignment Randomized Trial and Adaptive
Randomization
Bayesian Set of Best Dynamic Treatment Regimes and Sample Size
in SMARTs
Bayesian Set of Best Dynamic Treatment Regimes and Sample Size
in SMARTs for Binary Outcomes
Sample Size for SMART Designs in Non-Surgical Periodontal Trials
The fit for marglinalized linear model with SMCP penalties.
Smoothed minimax concave penalization (SMCP) method for
genome-wide association studies.
Data Sets for Statistical Methods in Customer Relationship
Management by Kumar and Petersen (2012).
Identification of Somatic Mutation-Driven Immune Cells
R functions and data from Chapter 5 of 'Statistical Methods for
Financial Engineering'
Filtering Algorithms for the State Space Model on the Stiefel
Manifold
Filtering Algorithms for the State Space Models on the Stiefel
Manifold
Companion to \emph{Statistical Modelling in R}
Data Structure and Manipulations Tool for Host and Viral
Population
Visualize Data for Host and Viral Population from 'SMITIDstruct'
using HTMLwidgets
Visualize Data for Host and Viral Population from 'SMITIDstruct'
using 'HTMLwidgets'
Outlier Detection Using Statistical and Machine Learning Methods
Simulation and Estimation of Multi-State Discrete-Time
Semi-Markov and Markov Models
Soft Maximin Estimation for Large Scale Array-Tensor Models
Soft Maximin Estimation for Large Scale Heterogeneous Data
Soft Maximin Estimation for Large Scale Heterogeneus Data
The Swiss Municipality Merger Tool Maps Municipalities Over Time
The Swiss Municipal Data Merger Tool Maps Municipalities Over
Time
Fitting right or left censored regression model under the Scale
Mixture of Normal distributions.
Fitting right or left censored regression model under the scale
mixture of normal distributions.
Fitting univariate censored regression model under the scale
mixture of normal distributions.
Fitting Univariate Censored Regression Model Under the Family of
Scale Mixture of Normal Distributions
Practicals for use with Davison (2003) Statistical Models
Practicals for Use with Davison (2003) Statistical Models
A bivariate Gaussian genotype clustering and calling algorithm
for Illumina microarrays
Bivariate Gaussian Genotype Clustering and Calling for Illumina
Microarrays
Annotation for SNP Microarrays and Pooling in R
Parallel Computing Toolset for genome-wide association studies
Parallel Computing Toolset for Genome-Wide Association Studies
(GWAS)
Investigating the Functional Characteristics of Selected SNPs
and Their Vicinity Genomic Region
SNPs-based whole genome association studies
SNPs-based Whole Genome Association Studies
SNPs-Based Whole Genome Association Studies
Knockoffs for Hidden Markov Models and Genomic Data
Knockoffs for Hidden Markov Models and Genetic Data
Maximally selected statistics for SNP data
Accessing, subsetting and plotting mouse SNPs.
Sequential Normal Scores in Statistical Process Management
Standard and Nonstandard Statistical Models and Methods for Test
Equating
Memory management in R by delayed assignments
Optimal Discriminant Clustering(ODC) and Sparse Optimal
Discriminant Clustering(SODC)
Making Sophisticated and Aesthetical Figures in R
SOM Algorithm for the Analysis of Multivariate Environmental
Data
SOM Bound to Realize Euclidean and Relational Outputs
Generalised Additive P-Spline Regression Models Estimation
The Sparse Online Principal Component Estimation Algorithm
Non-Parametric Estimation of the Off-Pulse Interval of a Pulsar
Estimation using Sequential Offsetted Regression
Stochastic Ordering Using Permutations (and Pairwise
Comparisons)
SPA3G: R package for the method of Li and Cui (2012)
A Program to Estimate Animal Abundance and Density using
Spatially-Explicit Capture-Recapture
A Program to Estimate Animal Abundance and Density using
Bayesian Spatially-Explicit Capture-Recapture Models
Spherical Projections of Astronomical Data
SPAtial Resolution-SEnsitive Models of Outbreak Dynamics
Perform rare variants association analysis based on summation of
partition approaches
Score Test Based on Saddlepoint Approximation
Score Test and Meta-Analysis Based on Saddlepoint Approximation
Simple Progress Bars for Procedural Coding
A New Reduced-Rank Linear Discriminant Analysis Method
Sparse Principal Component Analysis via Random Projections
(SPCAvRP)
Design and Analyze Studies using the Sequential Parallel
Comparison Design
Compute Power or Sample Size for GWAS with Covariate Effect
Statistical package for species richness estimation
Statistical Package for Species Richness Estimation
Receptor Abundance Estimation using Reduced Rank Reconstruction
and Clustered Thresholding
Estimation of the Relative Importance of Factors Affecting
Species Distribution Based on Stability Concept
Calculation of the Standardised Precipitation-Evapotranspiration
Index
A genetic-based assay for the identification of cell lines
A Genetic-Based Assay for the Identification of Cell Lines
Compute SPI Index using the Methods Genetic Algorithm and
Maximum Likelihood
Synthetic Paid Loss and Incurred Cost Experience (SPLICE)
Simulator
Scatter Plots Over-Viewed Using Summary Ellipses
Combining Different Spatial Datasets in Cancer Risk Estimation
Statistical Package for Reliability Data Analysis
Wald's Sequential Probability Ratio Test
Site Percolation on Square Lattice (SPSL)
Site Percolation on Square Lattices (SPSL)
Selection by Partitioning the Solution Paths
SPatially aUTomatic deNoising for Ims toolKit
Split a Dataset for Training and Testing
Semiparametric Maximum likelihood Method for interactions
gene-environment in case-mother control-mother designs
Semiparametric Maximum Likelihood for Mother-Child Designs.
Semiparametric Maximum Likelihood Method for Interactions
Gene-Environment in Case-Mother Control-Mother Designs
Selecting a Predictive Function for a Given Gene Expression Data
Bias Reduction in the Skew-Probit Model for a Binary Response
Stores data frames & matrices in SQLite tables
package to manage vector graphical maps using SQLite
Enhances Interaction with 'ODBC' Databases
Squared extrapolation methods for accelerating fixed-point
iterations
Squared Extrapolation Methods for Accelerating EM-Like Monotone
Algorithms
Statistical Ranking Color Scheme for Multiple Pairwise
Comparisons
SRMA Analysis of Array-based Sequencing Data
The Stepwise Response Refinement Screener (SRRS)
Simulator for Spatially Resolved Transcriptomics
Adjust Srt File to Get Better Experience when Watching Movie
Statistics Norway's Miscellaneous Small Tools
Searching Shared HLA Amino Acid Residue Prevalence
Semi-Supervised Classification and Regression Methods
Semi-Supervised Classification, Regression and Clustering
Methods
Fit and Analyze Smooth Supersaturated Models
Bayesian Spatio-Temporal Analysis in Stream Networks
Stream Suitable Online Support Vector Machines
Simulated Sampling Procedure for Community Ecology
Sample Size Calculation using Restricted Mean Survival Time
Functions for Stochastic Search Variable Selection (SSVS)
Two-dimensional sociometric status determination with rating
scales
Two-Dimensional Sociometric Status Determination with Rating
Scales
Secondary Trait Association analysis for Rare variants via
SEQuence data
Single to Double Arm Transition Design for Phase II Clinical
Trials
Interactive Document for Working with Basic Statistical Analysis
Statistical Tests for Functional Time Series
Calculation of the Standardized Temperature Index
Discovery of Motifs in Spatial-Time Series
Strength Training Manual R-Language Functions
Selection Threshold Optimized Empirically via Splitting
Selection of Training Populations by Genetic Algorithm
Short Tandem Repeats Analysis of Hotspot Zones
Analysis of Short Tandem Repeat (STR) Massively Parallel
Sequencing (MPS) Data
Enumeration and Uniform Sampling of Transmission Trees for a
Known Phylogeny
Spatio-Temporal Under-Five Mortality Methods for Estimation
Small-Area-Estimation Unit/Area Models and Methods for
Estimation in R
Sub-National Geospatial Data Archive: Geoprocessing Toolkit
Indirect inference in non-Gaussian stochastic volatility models
Quasi-likelihood and indirect inference in non-Gaussian
stochastic volatility models
Discrete Nonlinear Filtering for Stochastic Volatility Models
Map experimental data on custom-made SVG file
Causal Effect Estimation and Diagnostics with Support Vector
Machines
A multi-OS implementation of the TAMU SWAT model.
Scenario Weights for Importance Measurement
Retrieving, Organizing, and Analyzing Estuary Monitoring Data
Additional Functions for Retrieving, Organizing, and Analyzing
Estuary Monitoring Data
Functions for Analyzing and Plotting Estuary Monitoring Data
Helper Tools for Australian Hydrologists
SYNCSA - Analysis of functional and phylogenetic patterns in
metacommunities.
Analysis of Functional and Phylogenetic Patterns in
Metacommunities
Sabermetrics Functions For Baseball Analytics
Sabermetrics Functions for Baseball Analytics
Generalized and Safe-Bayesian Ridge and Lasso Regression
A Toolbox for the Analysis of Proteomics Data
An Extension of the Taylor Diagram to Two-Dimensional Vector
Data
Sample Size Calculation for Mean and Proportion Comparisons in
Phase 3 Clinical Trials
Sample Size Calculation for the Comparison of Means or
Proportions in Phase III Clinical Trials
Sample size calculations for normal means
Calculating sample size requirements when estimating the
difference between two binomial proportions
A framework for comparing the performance of MCMC samplers
A Framework for Comparing the Performance of MCMC Samplers
Optimal stratification of sampling frames for multipurpose
sampling surveys
Optimal Stratification of Sampling Frames for Multipurpose
Sampling Surveys
Downloads and Tidies the San Francisco Public Utilities
Commission Beach Water Quality Monitoring Program Data
Tools for Population Health Management Analytics
A Tool for Analyzing Political Behaviour
Tools for analyzing political behaviour data
A Tool Set for Analyzing Political Behavior Data
Score Test Integrated with Empirical Bayes for Association Study
Score Persons Using the Generalized Graded Unfolding Model
Implementation of SCORE, SCORE+ and Mixed-SCORE
The Scott-Knott Effect Size Difference (ESD) Test
Screen and clean variable selection procedures
The Second Dimension of Spatial Associations
The Second Dimension of Spatial Association
Seed Germination and Seedling Growth Indexes
A Quick Way to Map U.S. Rates and Data of U. S. States,
Counties, Census Tracts, or Seer Registries using 2000 and 2010
U. S. Census Boundaries
A Quick Way to Map U.S. Rates and Data of U.S. States, Counties,
Census Tracts, or Seer Registries using 2000 and 2010 U.S.
Census Boundaries
Supplemental U. S. 2010 Census Tract Boundaries for 23 Eastern
States without Registries for 'SeerMapper'
Supplemental U.S. 2010 Census Tract Boundaries for 20 Eastern
States, DC and PR without Registries for 'SeerMapper'
Supplemental U.S. 2010 Census Tract Boundaries for 20 Eastern
States (including DC and PR) without Registries for
'SeerMapper'
Supplemental U. S. 2010 Census Tract Boundaries for 15 States
with Seer Registries for 'SeerMapper'
Supplemental U.S. 2010 Census Tract Boundaries for 19 States
with Seer Registries for 'SeerMapper'
Supplemental U.S. 2010 Census Tract Boundaries for 14 Western
States without Seer Registries for 'SeerMapper'
Supplemental U.S. 2010 Census Tract Boundaries for 13 Western
States without Seer Registries for 'SeerMapper'
Supplemental U. S. 2000 Census Tract Boundaries for 23 Eastern
States without Seer Registries
Supplemental U.S. 2000 Census Tract Boundaries for 20 Eastern
States, District and Territory without Seer Registries for
'SeerMapper'
Supplemental U.S. 2000 Census Tract Boundaries for 20 States,
District and Territory without Seer Registries that are East of
the Mississippi River for Use with 'SeerMapper' Package
Supplemental U. S. 2000 Census Tract Boundary for 15 States with
Seer Registries for 'SeerMapper'
Supplemental U.S. 2000 Census Tract Boundaries for 19 States
with Seer Registries for 'SeerMapper'
Supplemental U.S. 2000 Census Tract Boundaries for 14 Western
States without Seer Registries for 'SeerMapper'
Supplemental U.S. 2000 Census Tract Boundaries for 13 Western
States without Seer Registries for 'SeerMapper'
Environmental Inequality Indices Based on Segregation Measures
KoNLP static dictionaries and Sejong project resources.
Estimates Species Abundances Based on Functional Traits
Determines Species Probabilities Based on Functional Traits
A General Algorithm to Enhance the Performance of Variable
Selection Methods in Correlated Datasets
Regularization for variable selection in model-based clustering
and discriminant analysis.
Regularization for Variable Selection in Model-Based Clustering
and Discriminant Analysis
Methods and Measures for Semantic Network Analysis
An Automated Cleaning Tool for Semantic and Linguistic Data
Dictionaries for the 'SemNetCleaner' Package
Pair-Wise Semblance Using a Rank-Based Kernel
A Data-Driven Similarity Kernel on Probability Spaces
Parametric and semi-parametric analyses of semi-competing risks
data
Parametric and semi-parametric analysis of semi-competing risks
data
Hierarchical Models for Parametric and Semi-Parametric Analyses
of Semi-Competing Risks Data
Solve Semi-Parametric Estimation by Implicit Profiling
Semiparametric Copula Bivariate Regression Models
Semiparametric Sample Selection Modelling with Continuous
Response
Semiparametric Sample Selection Modelling with Continuous or
Discrete Response
Semi-Parametric Sample Selection Modelling with Continuous or
Discrete Response
Parsimonious Mixtures of MSEN and MTIN Distributions
Analysis of Sensory and Consumer Data in a Mixed Model Framework
Sensitivity Analysis for Case-Control Studies
Sequential Allocation for Prospective Experiments
Sequential Bayesian Design for Accelerated Life Tests
Sequential Experimental Design via Matching on-the-Fly
Calculates possible epitopes and co-mutations
A Tool to Associate FASTA Sequences and Features
Simple GUI for graph based visualization of cluster of DNA
sequence reads
Simple GUI for Graph Based Visualization of Cluster of DNA
Sequence Reads
Network Module-Based Model in the Differential Expression
Analysis for RNA-Seq
Generate RNA-Seq Data from Gene-Gene Association Networks
Exact Bayesian Model Selection Methods for the Sparse Normal
Sequence Model
Exact Sequential Analysis for Poisson Data
Exact Sequential Analysis for Poisson and Binomial Data
Observational Database Study Planning using Exact Sequential
Analysis for Poisson and Binomial Data
Computation and visualization of socioeconomic indices and
categories distributions
SetMethods: A Package Companion to "Set-Theoretic Methods for
the Social Sciences".
Functions for Set-Theoretic Multi-Method Research and Advanced
QCA
Group Testing Procedures for Signal Detection and
Goodness-of-Fit
Change-Point Estimation using Shape-Restricted Splines
Tools for Analyzing Planar Shape and Associated Patterns
Standardised Rigid Rotations of Articulated Three-Dimensional
Structures
Shape Selection for Landsat Time Series of Forest Dynamics
Multivariate Outlier Explanations using Shapley Values and
Mahalanobis Distances
Shapley Value Regression for Relative Importance of Attributes
Shared Hotelling T2 test for small sample microarray experiments
Statistical significance of Sharpe ratio
Statistical Significance of the Sharpe Ratio
Builds Chronologies from Oxygen Isotope Profiles in Shells
Exactly Computing the Tail of the Poisson-Binomial Distribution
Inference in Regressions with Shift-Share Structure
Image Manipulation, with an Emphasis on Journaling
'RStudio' Addin for Quick Setup of ShinyDashboard Apps
'RStudio' Addin for Building Shiny Apps per Drag & Drop
Functions to Minimize Bonehead Moves While Working with 'shiny'
Signal Extraction Approach for Sparse Multivariate Response
Regression
Individual-Based, Spatially-Explicit Simulation and Analysis of
Multi-State Movements in River Networks and Heterogeneous
Landscapes
Individual-Based, Spatially-Explicit Simulation and Analysis of
Multi-State Movements in River Networks, Homogeneous, and
Heterogeneous Landscapes
Simulating Multistate Movements in River/Heterogeneous
Landscapes
A Phylogenetic Simulator for Reticulate Evolution
Nonparametric Estimation by the Method of Sieves
Identify and Visualize Significantly Responsive Branches in a
Phylogenetic Tree
Functions to determine significantly responsive branches of
phylogenetic trees and produce colored plots both in FigTree
(via exported file) and R
Determine significantly responsive branches in phylogenetic
trees
Identify and visualize significantly responsive branches in a
phylogenetic tree
Cell Type Identification and Discovery from Single Cell Gene
Expression Data
Significant Variable Selection in Linear Regression
Consistent Significance Controlled Variable Selection in Linear
Regression
Consistent Significance Controlled Variable Selection in
Generalized Linear Regression
Graphical User Interface for Simulation of Diffusion Processes
Simulation of Piecewise Linear Fuzzy Numbers
Simulation-Based Inference Methods for Infectious Disease Models
Simultaneous Comparisons for Multiple Endpoints
Simulation of Correlated Data with Multiple Variable Types
Including Continuous and Count Mixture Distributions
Structure for Organizing Monte Carlo Simulation Designs
Modeling and Assessing Similarity of Drug Dissolutions Profiles
Simulation of Legal Exemption System for European Cartel Law
An Open-Source Framework for Statistical Simulations in R
A Modular Framework for Statistical Simulations in R
Simulation of Evolution of Enzyme Under Constraints
A comprehensive modeling framework for epidemiological outcomes and a multiple-imputation approach to haplotypic analysis of population-based data
A comprehensive modeling framework for epidemiological outcomes
and a simulation-based approach to haplotypic analysis of
population-based data
Simulated Survival and Hazard Analysis for Time-Dependent
Exposure
A Framework for Stochastic Disease Spread Simulations
A Framework for Data-Driven Stochastic Disease Spread
Simulations
Simulation of Correlated Data with Multiple Variable Types
Tools to Simulate Phenotype(s) with Epistatic Interaction
Simulations to predict the number of loci expected in RAD and
GBS approaches.
Simulations to Predict the Number of RAD and GBS Loci
Simulate Pedigrees Ascertained for a Rare Disease
Simulate Genetic Sequence Data for Pedigrees
Simulation of Correlated Systems of Equations with Multiple
Variable Types
'Simulates Univariate and Semi-Competing Risks Data Given
Covariates and Piecewise Exponential Baseline Hazards'
Nonparametric Simulation of RNA-Seq Data
Test Surveys by Simulating Spatially-Correlated Populations
Simulate Longitudinal Dataset with Time-Varying Correlated
Covariates
Simulation Tools for Planning Vitamin D Studies
Bayesian Inference and Sensitivity Analysis for Causal Effects
from 2 x 2 and 2 x 2 x K Tables in the Presence of Unmeasured
Confounding
Numerical integration of functions over simplices
Flexible and Robust Agreement and Reliability Analyses
Simulation process of 4 selection methods in predicting chemical
potent compounds
A Calculator for Single-Case Effect Sizes
Site Adaptation of Solar Irradiance Modeled Series
Inferring an Animal's Sites of Interest from High Resolution
Data
Six Sigma Tools for Quality Control and Improvement
Six Sigma Tools for Quality and Process Improvement
Estimating the Sizes of Populations at Risk of HIV Infection
from Multiple Data Sources Using a Bayesian Hierarchical Model
The Skew Hyperbolic Student t-distribution
The Skew Hyperbolic Student t-Distribution
Optimization of Skewed Distributions with Birth-Death Processes
The Skillings-Mack test Statistic for block designs with missing
observations
The Skillings-Mack Test Statistic for Block Designs with Missing
Observations
Search and Download Satellite Imagery using the SkyWatch API
Data sets from Ramsey and Schafer's "Statistical Sleuth (2nd
ed)"
Data Sets from Ramsey and Schafer's "Statistical Sleuth (2nd
Ed)"
Data sets from Ramsey and Schafer's "Statistical Sleuth (3rd
ed)"
Data Sets from Ramsey and Schafer's "Statistical Sleuth (3rd
Ed)"
Sparse Multiple Canonical Correlation Network Analysis Tool
Fast and Robust Surrogate Variable Analysis
Online Unsupervised Outlier Detection Using Finite Mixtures with
Discounting Learning Algorithms
A set of tools developed by the Foundation SmarterPoland.pl
Tools for Accessing Various Datasets Developed by the Foundation
SmarterPoland.pl
Fitting illness-death model for interval-censored data
Estimation of Smooth Hazard Models for Interval-Censored Data
with Applications to Survival and Illness-Death Models
A Collection of Smooth Tensor Estimation Methods
Play and Analyse the Game of Snakes and Ladders
Snowball stemmers based on the C libstemmer UTF-8 library
Snowball Stemmers Based on the C 'libstemmer' UTF-8 Library
Functions and Exampels for "Software for Data Analysis"
Functions and Examples for "Software for Data Analysis"
Soil Physics Tools (for Linux systems only)
Sobol Sequences with Better Two-Dimensional Projections
Tools for Collecting Social Media Data and Generating Networks
for Analysis
Generates social networks based on distance.
Social Position Indicators Construction Toolbox
Interfaz interactiva con fines didacticos
Classification Random Forests for Soft Decision Trees
Models of Soil Organic Matter Decomposition
A System of Soil Classification for Making and Interpreting Soil
Surveys
Organic Carbon and Plant Available Nutrient Contents in Soil
Apply Sojourn Methods for Processing ActiGraph Accelerometer
Data
Supporting Objects for Sojourn Accelerometer Methods
Iterative Methods for Solving Linear System of Equations
Solver Suite for Alkalinity-PH Equations
An Individual-Based Model of Bird Song Evolution
Static Adsorption Experiment Plotting and Analysis
Turns a data frame into an HTML file containing a sortable
table.
Estimation and Inference Methods for Sorted Causal Effects and
Classification Analysis
A Graphical Model Approach to Identify Primary Genes in
Perturbed Biological Pathways
Soybean Nested Association Mapping Dataset
USDA Northern Region Uniform Soybean Tests Dataset
Spatial Analysis of Field Trials with Splines
Linear Network Preprocessing for Spatial Statistics
Nonparametric Modeling and Monitoring of Spatio-Temporal Data
Develop and Run Spatially Explicit Discrete Event Simulation
Models
Development Tools for 'SpaDES' and 'SpaDES' Modules
Core Utilities for Developing and Running Spatially Explicit
Discrete Event Simulation Models
Core Utilities for Developing and Running Spatially Explicit
Discrete Event Models
Additional Tools for Developing Spatially Explicit Discrete
Event Simulation (SpaDES) Models
Model-Based Clustering of Spatio-Temporal Data
Blind Source Separation for Multivariate Spatio-Temporal Data
Species-Richness Prediction and Diversity Estimation with R
'HJ Biplot' using Different Ways of Penalization
'HJ-Biplot' using Different Ways of Penalization Plotting with
'ggplot2'
Sparse Cholesky LDL Decomposition of Symmetric Matrices
Scaling Count and Binary Data with Sparse Factor Analysis
The Sparse Latent Position Model for Nonnegative Interaction
Data
Sparse Learning Algorithms Using a LASSO-Type Penalty for
Coefficient Estimation and Model Prediction
Multiple Systems Estimation for Sparse Capture Data
'Multiple Systems Estimation for Sparse Capture Data'
Sparse time series chain graphical models
Sparse Time Series Chain Graphical Models
Sparse Vector Field Consensus for Vector Field Learning
Regularized Spatial Maximum Covariance Analysis
Regularized Principal Component Analysis for Spatial Data
Blind Source Separation for Multivariate Spatial Data
Performs various spatial epidemiological analyses
Methods and Data for Spatial Epidemiology
A Shiny Web Application for the Analysis of Spatial and
Spatio-Temporal Disease Data
Fit Spatial Generalized Extreme Value Models
Kernel Density Estimation for Spatial Data
Multivariate nonparametric methods based on spatial signs and ranks
Multivariate nonparametric methods based on spatial signs and
ranks
Multivariate Nonparametric Methods Based on Spatial Signs and
Ranks
Generation of Spatial Data with Spatially Varying Model
Parameter
Tools for Assessment the Association Between Two Spatial
Processes
Robust Maximum Likelihood Estimation for Spatial Error Model
Non-Parametric Tests of Parametric Specifications
Change Points Detection with Spectral Clustering
Forecast verification routines for the SPECS FP7 project
Forecast Verification Routines for the SPECS FP7 Project
Verification Routines for Ensemble Forecasts of Weather and
Climate
Forecast Verification Routines for Ensemble Forecasts of Weather
and Climate
Discovering Genetic Ancestry Using Spectral Graph Theory
Versatile Ultra-Fast Spectral Clustering for Single and
Multi-View Data
Fast Adaptive Spectral Clustering for Single and Multi-View Data
Spherical Wavelets and SW-based Spatially Adaptive Methods
Numerical integration over spheres and balls in n-dimensions;
multivariate polar coordinates
Numerical Integration over Spheres and Balls in n-Dimensions;
Multivariate Polar Coordinates
Sparse Method to Identify Joint Effects of Functional Predictors
Spillover/Connectedness Index Based on VAR Modelling
Functional Data Analysis using Splines and Orthogonal Spline
Bases
Display Tournament Fixtures using Knock Out and Round Robin
Techniques
SPatial and Optimally Temporal (SPOT) Sampling
Rendering Parameterized SQL and Translation to Dialects
An Experiment Superstructure for 'DeepSqueak'
An Experiment Interface for 'DeepSqueak' Bioacoustics Research
Nonparametric, Tuning-Free Estimation of an S-Shaped Function
Nonparametric, Tuning-Free Estimation of S-Shaped Functions
Bootstrap Stacking of Random Forest Models for Heterogeneous
Data
Statistical Analysis of Mixed Ploidy Populations
Plots a QQ-Norm Plot with several Gaussian simulations.
Quantile-Quantile Plot with Several Gaussian Simulations
Plots a QQ-Norm Plot with Several Gaussian Simulations
Student's t Vector Autoregression (StVAR).
Student's t Vector Autoregression (StVAR)
Stabilizing Regression and Variable Selection
Estimate the 4 parameters of stable law using different methods
Estimate the Four Parameters of Stable Laws using Different
Methods
Stylized concatenation of data.frames or ffdfs
Tools for Analysis of Stacked Multiple Imputations
Mixture of Two-Stage Logistic Regressions with Fixed Candidate
Knots
Bayesian Mortality Modelling with 'Stan'
Statistical Analysis of Chemistry, Histopathology, and
Reproduction Endpoints Including Repeated Measures and
Multi-Generation Studies
Statistical Analysis for Environmental Data
Statistical Analysis for Environmantel Data
alpha implementation of the StatDataML proposal
implementation of the StatDataML proposal
Easy Data Manipulation, Data Quality and Statistical Checks
Statistical Performance Measures to Evaluate Covariance Matrix
Estimates
Statistical Rank Aggregation: Inference, Evaluation, and
Visualization
An App that Assists Intro Statistics Instructors with Data Sets
Bayesian Ordinal Analysis for State Trace Designs
Shiny Apps for Automated Data Analysis and Automated
Interpretation
Semi-Parametric Stein-Like Estimator with Instrumental Variables
Steiner approach for Biological Pathway Graph Analysis
Steiner Tree Approach for Graph Analysis
Reconstructing Tree Growth and Carbon Accumulation with Stem
Analysis Data
Spatio-Temporal Estimation and Prediction for Censored/Missing
Responses
Provide the Stepwise Procedure for Beta Regression Models
Stepwise Procedure for Beta Regression Models
Stepwise Procedure for Beta, Beta-Binomial and Negative Binomial
Regression Models
Step-Wise Signal Extraction via Marginal Likelihood
Power Calculation for Stepped Wedge Designs
Multiple Testing Method to Control Generalized Family-Wise Error
Rate and False Discovery Proportion
Stereo Camera Calibration and Reconstruction
Fits Stickbreaking, Multiplicative and Additive Models to Data
Solving stochastic linear programs with a single risk constraint
Real-Time Stock Price & Volume in China Market
Write Storm Bolts in R using the Storm Multi-Language Protocol.
Generic Framework to Analyze Trading Strategies
Performs Stratified Covariate Balancing for Data with Discrete
and Continuous Outcome Variables
Builds Trees by Sampling Variables from Groups
Builds Trees by Sampling Variables in Groups
Different Methods for Stratified Sampling
Stream Metabolism-A package for calculating single station metabolism from diurnal Oxygen curves
Stream Metabolism-A package for calculating single station
metabolism from diurnal Oxygen curves
Calculate Single Station Metabolism from Diurnal Oxygen Curves
Computation and estimation of reliability of stress-strength
models
Computation and Estimation of Reliability of Stress-Strength
Models
Creates an Adjacency Matrix from a List of Strings
R Codes and Datasets for Generalized Linear Mixed Models: Modern
Concepts, Methods and Applications by Walter W. Stroup
Spatial Structural Diversity Quantification in Raster Data
False Discovery Control Procedure Integrating the Prior
Structure Information
Subsampling Ranking Forward Selection (SuRF)
Maximum-Likelihood Cultural Consensus Analysis with Sub-Cultures
Gene selection using Lasso for Microarray data with user-defined
genes fixed in model.
Subgroup Specific Optimal Dose Assignment
Visual Exploration of Protein Alignments Resulting from Multiple
Substitution Matrices
Graphical Displays for Subgroup Analysis in Clinical Trials
Patient Subgroup Identification for Clinical Drug Development
Identify Metabolic Subpathways Mediated by MicroRNAs
Identify Signal Subpathways Competitively Regulated by LncRNAs
Based on ceRNA Theory
Annotation and Identification of the KEGG pathway.
Annotation and identification of the KEGG pathways.
Identification of Disease related sub-pathways from the KEGG
pathways.
A software package for annotation and identification of the KEGG
pathways.
Prioritization of Candidate Cancer Subtype Specific Drugs
Suess and Laws Corrections for Marine Stable Carbon Isotope Data
Building Polygenic Risk Score Using GWAS Summary Statistics
Constructing Suns-Voc from Outdoor Time-Series I-V Curves
Get Sunrise and Sunset Times for US Airport Locations
Detecting Structural Change with Heteroskedasticity
Exact Test and Visualization of Multi-Set Intersections
Superfast Likelihood Inference for Stationary Gaussian Time
Series
Simulation-Based Power Analysis for Factorial Designs
Surface Reconstruction Using the 'CGAL' C++ Library
Find Optimal Sampling Locations Based on Spatial Covariate(s)
Evaluation of surrogate endpoints in clinical trials
Evaluation of Surrogate Endpoints in Clinical Trials
Estimation of the Proportion of Treatment Effect Explained by
Surrogate Outcome Information
Early Testing for a Treatment Effect using Surrogate Marker
Information
Discrete Time Survival and Longitudinal Data Analysis
Group Sequential Design for a Clinical Trial with Censored
Survival Data
Analysis of Proportional Hazards Model with Sparse Longitudinal
Covariates
Multiple Imputation Method in Survival Analysis
Predictive Evaluation Metrics in Survival Analysis
Weibull Regression for a Right-Censored Endpoint with an
Arbitrarily Censored Covariate
Weibull Regression for a Right-Censored Endpoint with
Interval-Censored Covariate
The Gini concentration test for survival data
High Dimensional Survival Data Analysis with Markov Chain Monte
Carlo
Construction and Visualization of Survival Path Tree using
Time-Series Survival Data
Nomograms for Right-Censored Outcomes from Survey Designs
Ensemble Learning Algorithms Based on Support Vector Machines
Utilities for Sweave together with TeX listings package
Utilities for Sweave Together with TeX 'listings' Package
Formatting and Conversions for Swimming Times
Data Import, Cleaning, and Conversions for Swimming Results
Air Quality Data of Switzerland for one year in 30 min Resolution
Air Quality Data of Switzerland for one year in 30 min
Resolution
Air Quality Data of Switzerland for One Year in 30 Min
Resolution
Inference and Analysis of Sympatry Networks
Systemic Scenario Selection for Stress Testing
Systematic Scenario Selection for Stress Testing
Symbolic Representation of the Determinant of a Square Matrix
Symbolic Representation of Matrix Determinant
Analyze Healthcare Social Media Data from the 'Symplur' API
Subsample Temporal Data to Synchronal Events and Compute the MCI
A Synchronized Tausworthe RNG for R and Python
Interface to The Synergizer service for translating between sets
of biological identifiers.
Causal Inference using the Synthetic Control Group Method
Synthetic Control Group Method for Comparative Case Studies
Synthetic Control Method to Forecast Series
Synthetic Experience Tracking Insurance Claims
Tools and Tests for Experiments with Partially Synthetic Data
Sets
Functions for Applying the T^2-Test for Equivalence
Tools for Computational Optimal Transport
Functions to Support the ICES Transparent Assessment Framework
Mixture model approach to compare two samples of Tiling Array
data
A Two-Stage Approach to Maximize Interpretability of Drug
Response Models Based on Multiple Molecular Data Types
Time Course Analysis of Variance for Microarray
Bayesian Modeling of Autoregressive Threshold Time Series Models
Tree Branches Evaluated Statistically for Tightness
TBF Methodology Extension for Multinomial Outcomes
Rearrangement Distances Between Unrooted Phylogenetic Trees
Survival Analysis using a Transform-Both-Sides model
Survival Analysis using a Transform-Both-Sides Model
TCC: Differential expression analysis for tag count data with
robust normalization strategies
Simple TCGA Data Access for Integrated Statistical Analysis in R
Retrieve Genomic and Clinical Data from TCGA
Client for the Cancer Imaging Archive REST API
Spacekime Analytics, Time Complexity and Inferential Uncertainty
Statistical Tools for Topological Data Analysis
Analyze High-Dimensional Data Using Discrete Morse Theory
Machine Learning and Inference for Topological Data Analysis
Vector Summaries of Persistence Diagrams
Gene Network Inference from Time-Series Transcriptomic Data
Time-Domain Deconvolution of Seismometer Response
Granier's Sap Flow Sensors (TDP) Analysis
Companion Package for the Book "Data Integration, Manipulation
and Visualization of Phylogenetic Trees"
Companion Package for the Book "Data Integration, Manipulation
and Visualization of Phylogenetic Trees" by Guangchuang Yu
(2022, ISBN:9781032233574)
A Boosted Tweedie Compound Poisson Model
Insertion/Deletion Dynamics for Transposable Elements
Multiple Hypothesis Testing on an Aggregation Tree Method
Turbulence time series Event Detection and classification
Turbulence Time Series Event Detection and Classification
Trimmed Elemental Estimation for Linear Models
Social Representation Theory Application: The Free Evocation of
Words Technique
Test for A+B Traditional Escalation Rule
Fast simulation of reconstructed phylogenetic trees under
time-dependent birth-death processes
Diversification Rate Estimation and Fast Simulation of
Reconstructed Phylogenetic Trees under Tree-Wide
Time-Heterogeneous Birth-Death Processes Including
Mass-Extinction Events
TFDEA (Technology Forecasting using Data Envelopment Analysis)
functions
TFDEA (Technology Forecasting using DEA)
Technology Forecasting using DEA (Data Envelopment Analysis)
Efficient and accurate P-value computation for Position Weight
Matrices.
Efficient and Accurate P-Value Computation for Position Weight
Matrices
Optimal Thresholding Fisher's P-Value Combination Method
Rapid Reconstruction of Time-Varying Gene Regulatory Networks
Technical Variation Elimination with Ensemble Learning
Architecture
a problem solving environment for fitting separable nonlinear
models in physics and chemistry applications
Fitting Seperable Nonlinear Models in Spectroscopy and
Microscopy
Fitting Separable Nonlinear Models in Spectroscopy and
Microscopy
a problem solving environment for fitting superposition models
a problem solving environment for fitting separable nonlinear models in physics and chemistry applications
Pairwise Distance Estimation with TKF91 and TKF92 Model
Calculate TL-Moments and Convert Them to Distribution Parameters
Template Model Builder: A General Random Effect Tool Inspired by
ADMB
Template Model Builder: A General Random Effect Tool Inspired by
'ADMB'
'Too Many, Too Improbable' (TMTI) Test Procedures
Temporal Network Centrality (TNC) Measures
Total Operating Characteristic Curve and ROC Curve
Two One-Sided Tests (TOST) Equivalence Testing
Transformed Ornstein-Uhlenbeck Model for Adsorption Kinetics
Estimation of Transition Probabilities for the Illness-Death
Model
Variable Selection via Threshold Partial Correlation
Methods for Measuring Functional Diversity Based on Trait
Probability Density
A Novel Topology-Based Pathway Enrichment Analysis Approach
Thresholded Partial Least Squares Model for Neuroimaging Data
Tool-Kit for Dynamic Materials Model and Thermal Processing Maps
Estimation of transitions probabilities in multistate models
Estimation of Transition Probabilities in Multistate Models
A tool for downloading functional traits data for plant species
A Tool for Downloading Functional Traits Data for Plant Species
Tree Ring Analysis of Disturbance Events in R
TRFLP Analysis and Matching Package for R
'TRFLP' Analysis and Matching Package for R
Tensor Regression with Envelope Structure and Three Generic
Envelope Estimation Approaches
Tensor Regression with Envelope Structure
Functions and Datasets to Accompany the Book "The R Software:
Fundamentals of Programming and Statistical Analysis"
T-Rex Selector: High-Dimensional Variable Selection & FDR
Control
Tools for Causal Inference with Possibly Invalid Instrumental
Variables
Training Set Determination for Genomic Selection
Two-dimensional peak sentinel tool for GC x GC-HRTOFMS
Total Survey Error (Independent Samples)
Download and Manage Data from Tehran Stock Exchange
Total Survey Error Under Multiple, Different Weighting Schemes
Two Stage Forecasting (TSF) for Long Memory Time Series in
Presence of Structural Break
Trait Specific Gene Selection using SVM and GA
Two Stage-Grouped Sure Independence Screening
Long Short Term Memory (LSTM) Model for Time Series Forecasting
Fast Two Stage Multiple Change Point Detection
Truncated Scale Mixtures of Normal Distributions
Truncated Scale Mixtures of Skew-Normal Distributions
Mining Univariate and Multivariate Motifs in Time-Series Data
Time Series Database Interface extensions for MySQL
Prediction using time-course gene expression
Time Series Database Interface extensions for PostgreSQL
Functions for Baseline-Based Time Series Prediction
Functions for Benchmarking Time Series Prediction
Time Series Segmentation of Residual Trends
Time Series Database Interface extentions for SQLite
Time Series Analysis with State Space Model
Ternary Search Tree for Auto-Completion and Spell Checking
Fitting and Predict Time Series Interactive Laboratory
Tree-Structured Modelling of Varying Coefficients
Deep Learning Model for Time Series Forecasting
Multiscale Multifractal Analysis of Time Series Data
Time Series Database Interface extensions for fame
Time Series Database Interface extension to connect with
getSymbols
TSdbi extension to connect with getSymbols
Time Series Database Interface extensions for  get.hist.quote
Time Series Database Interface extensions for get.hist.quote
TSdbi extension for importing time series from web sources via
JSON
'TSdbi' Extensions to Wrap Miscellaneous Data Sources
Time Series Database Interface extensions for ODBC
TSdbi Interface to PADI Time Series Server (for e.g. Fame)
TSdbi methods for PADI Time Series Server Interface
Time Series Database Interface extensions for PADI Time Series
Server
TSdbi extensions for PADI Time Series Server
Create Interactive Plots on Time Series Dataset
'TSdbi' Extension to Connect with 'SDMX'
Trend Estimation of Univariate and Bivariate Time Series with
Controlled Smoothness
Generic SQL helper functions for TSdbi SQL plugins
Generic SQL Helper Functions for 'TSdbi' SQL Plugins
Tools for Time Series Analysis and Forecasting
Functions for Time Series Analysis and Forecasting
Time Series Database Interface extension to connect to
spreadsheets
TSdbi extension to connect to spreadsheets
Time Series Database Interface extension to connect to zip files
Display Tree Structured Data using Datatable Widget (DT)
Graphical interface to proceed temporel trend analysis
Temporal Trend Analysis Graphical Interface
Master Curve Estimates Corresponding to Time-Temperature
Superposition
Sampling and Calculating the First and Second Moments for the
Doubly Truncated Multivariate t Distribution
A Toolbox for Linear Discriminant Analysis with Penalties
Lumped hydrological model developed at the Vienna University of
Technology for education purposes.
Lumped Hydrological Model for Education Purposes
Lumped/Semi-Distributed Hydrological Model for Education
Purposes
Multivariate Tests for the Vector of Means
Higher Criticism Test of Two Frequency Counts Tables
Automatically Convert Hierarchical for-Human Tables to
Machine-Readable LongForm Dataframes
Tail Classifier for Thick-Tailed Discrete Data
Tools for the Analysis of Microchemical Profiles from Otoliths
Flexible tree taper curves based on Semiparametric Mixed Models.
Flexible tree taper curves based on semiparametric mixed models.
Flexible Tree Taper Curves Based on Semiparametric Mixed Models
Replicate Tariff Method for Verbal Autopsy
Earthquake Traveltime Calculations for 1-D Earth Models
Efficient Computation of the t* Statistic of Bergsma and Dassios
(2014)
Efficient Computation and Testing of the Bergsma-Dassios Sign
Covariance
Taxonomic standardization of plant species names
Taxonomic Standardization of Plant Species Names
Data from the 2010 Tourism Forecasting Competition
A Collection of Amended Histograms Designed for Teaching
Statistics
Fits Neural Networks to Learn About Backpropagation
Fits neural networks to learn about back propagation
Demonstrations for teaching and learning
Demonstrations for Teaching and Learning
Sampling designs and parameter estimation in finite population
Selection of samples and parameter estimation in finite
population
Selection of Samples and Parameter Estimation in Finite
Population
Tests and Estimation of Covariance Change-Points for Hi-Dim Data
API Wrapper for Taiwan Economic Journal Data Service
Temporal Contributions on Trends using Mixed Models
Outputs Temporal Profile of Molecules Undergoing Stochastic
Simulations
Outputs Temporal Profile of Molecules from Stochastic Simulation
Algorithm Generated Datasets
Tensor Noise Reduction and Completion Methods
Rank and Factor Loadings Estimation in Time Series Tensor Factor
Models
Calculation of Reliability and Failure Probability in Civil
Engineering
FWER and FDR Controlling Procedures for Multiple Correlation
Tests
Missing Item Responses Imputation for Test and Assessment Data
Optimal Test Design Approach to Fixed and Adaptive Test
Construction
Analysis of the Interpopulation Degree of Sexual Dimorphism
using Summary Statistics
Analysis Of The Interpopulation Difference In Degree of Sexual
Dimorphism Using Summary Statistics
Analysis of the Interpopulation Difference in Degree of Sexual
Dimorphism Using Summary Statistics
Test Functions for Simulation Experiments and Evaluating
Optimization and Emulation Algorithms
Optimal Analysis of Test and Rating Scale Data
Scores tests, shows and saves the results
GUI for obtaining raw & transformed tests scores. Saves results
in tabular format.
GUI for entering test items and obtaining raw and transformed
scores
GUI for Entering Test Items and Obtaining Raw and Transformed
Scores
Statistical tests to compare two survival curves with recurrent
events
Bootstrap Test for Similarity of Dose Response Curves Concerning
the Maximum Absolute Deviation
Bootstrap Test for the Similarity of Dose Response Curves
Concerning the Maximum Absolute Deviation
Personalizes and Randomizes Exams Written in 'LaTeX'
Supporting Functions and Data for Geo-Spatial Analytics Courses
at UTDallas, Texas
Regression Analysis and Forecasting Using Textual Data from a
Time-Varying Dictionary
Predict continuous valued outputs associated with text
documents.
Calculate Sample Sizes Required for Critical Thermal Limits
Experiments
Design and Analysis of Clinical Non-inferiority or Superiority
Trials with Active and Placebo Control
Design and Analysis of Clinical Non-Inferiority or Superiority
Trials with Active and Placebo Control
ML Estimator for Baseline-Placebo-Treatment (Three-group)
designs
ML Estimator for Baseline-Placebo-Treatment (Three-Group)
Experiments
The Japanese Pictorial Maxim "See No Evil, Hear No Evil, Speak
No Evil"
Threshing and Reaping for Principal Components
Optimum threshold estimation based on cost function in a two and
three state setting
Threshold and AUC Estimation with Right-Censored Data at a Fixed
Time t
Execution Functions for Tick Data Back Test
Create dynamic reports using a TiddlyWiki template.
Tide Analysis and Prediction of Predominantly Semi-Diurnal Tides
Functions for Tidy Analysis of Randomly Generated Data
Functions for Tidy Analysis and Generation of Random Data
Converts 'MultiQC' Reports into Tidy Data Frames
This package performs various analyses of functional gene tiling
DNA microarrays for studying complex microbial communities.
This package analyzes functional gene tiling DNA microarrays for
studying complex microbial communities.
Characterization of functional genes in complex microbial
communities using tiling DNA microarrays
Survival Analysis of Time Varying Coefficients Using a
Tree-Based Approach
Concurrent Multivariate Models with Time-Varying Coefficients
Tinflex - Universal non-uniform random number generator
Tinflex - Universal Non-Uniform Random Number Generator
A Universal Non-Uniform Random Number Generator
Resources of Tinn-R GUI/Editor for R Environment
Using Tip Dates with Phylogenetic Trees in BEAST
Using Tip Dates with Phylogenetic Trees in BEAST (Software for
Phylogenetic Analysis)
Enhanced Tipping Point Displays the Results of Sensitivity
Analyses for Missing Data
Enhanced Tipping Point Displays the Results of Sensitivity
Analysis for Missing Data
Non-Convex Optimization and Statistical Inference for Sparse
Tensor Graphical Models
Melting Temperature of Nucleic Acid Sequences
Identification of Conditionally Essential Genes in Transposon
Sequencing Studies
Multivariate Tools for Compositional Data Analysis
An Efficient and Deterministic Method for Identifying
Topological Domains in Genomes
Inference, aggregation and visualization for top-k ranked lists
Inference, Aggregation and Visualization for Top-K Ranked Lists
Multi-Criteria Method for Decision (TOPSIS)
The Topic SCORE Algorithm to Fit Topic Models
Total Cophenetic Index: An R Package to Quantify Tree Balance
Quantify the Balance of Phylogenetic Trees
Calculates Safety Stopping Boundaries for a Single-Arm Trial
using Bayes
Incorporating Ecological Data and Associated Uncertainty in
Bioaccumulation Modeling
Analysis of Large-Scale Toxico-Genomic Data
A Traceability Focused Grammar of Clinical Data Summary
Sequences and trajectories mining for social scientists
Trajectory Miner: a Toolbox for Exploring and Rendering
Sequences
Trajectory miner: a toolbox for exploring and rendering sequence
data
Extras for use with the TraMineR package
Nonparametric Trace Regression via Sign Series Representation
Reconstruct animal paths from magnetometer, accelerometer, depth
and optional speed data.
Reconstruct animal tracks from magnetometer, accelerometer,
depth and optional speed data.
Reconstruct Animal Tracks from Magnetometer, Accelerometer,
Depth and Optional Speed Data
Trades, Curves, Rating Tables, Add-on Tables, CSAs
CCR, Entropy-Based Correlation Estimates & Dynamic Beta
CCR, Advanced Correlation & Beta Estimates, Betting Strategies
Traffic Status Prediction in Urban Places using Neural Network
Models
Traffic Predictions Using Neural Networks
Statistical Data Analysis for Randomized Block Design
Experiments
A Predictive Model for Trait Based Community Assembly of Plant
Species
Fit Linear Transformation Models for Censored Data
Fit Linear Transformation Models for Right Censored Data
Implementation of Transportation Problem Algorithms
Inference of Transmission Tree from a Dated Phylogeny
Transfer Learning for Tensor Graphical Models
"Pacote Para Analise De Experimentos Com Testemunhas
Adicionais""
Pacote Para Analise De Experimentos Com Testemunhas Adicionais
Hierarchical Multinomial Processing Tree Modeling
Air Pollution Removal by Dry Deposition on Trees
Trajectory Presence and Heterogeneity in Multivariate Data
Calculate and Map Distances Between Phylogenetic Trees
Terrestrial Point Cloud Processing of Forest Data
Estimating diversification rate changes in phylogenies
Estimating diversification rate changes and mass extinction
events in phylogenies
Estimating speciation and extinction rates based on phylogenies
Estimating birth and death rates based on phylogenies
Phylogenetic Tree Search Using Custom Optimality Criteria
Phylogenetic Analysis with Morphological Data
Phylogenetic Analysis with Discrete Character Data
Simulating trees under the birth-death model
Simulating Phylogenetic Trees under a General Model
Simulating Phylogenetic Trees under a General Model with or
without Shifts
Simulating Phylogenetic Trees under General Bellman Harris and
Lineage Shift Model
Create, Modify and Analyse Phylogenetic Trees
Tools for Microclimate and Biophysical Ecology
Odds Ratio Estimation for the Trend in Tend Model
Odds Ratio Estimation for the Trend in Trend Model
Odds Ratio Estimation and Power Calculation for the Trend in
Trend Model
Estimating Trend, Velocity and Acceleration from Sea Level
Records
Trend of High-Dimensional Time Series Matrix Estimation
Two Sample Order Free Trend Nonparametric Inference
Bayesian Statistics for 2D/3D Transformations
Propensity Score Matching of Non-Binary Treatments
R Functions for Chapter 3,4,6,7,9,10,11,12,14,15 of Sample Size
Calculation in Clinical Research
Trio Model with a Combination of Lasso and Group Lasso
Regularization
Social Relation Model (SRM) analyses for single round-robin
groups
Social Relation Model (SRM) analyses for single or multiple
round-robin groups
Social Relation Model (SRM) Analyses for Single or Multiple
Groups
Generation of Treatment Combination (in Standard Order) in 2^n
Factorial Experiment
Skill Estimation Based on a Single Bayesian Network
Truncated Multivariate Normal and Student Distributions
Transposable Sphering for Large-Scale Inference with Correlated
Data.
Multi-objective parameter tuning for classifiers
Multi-Objective Parameter Tuning for Classifiers
Twitter Topic Modeling and Visualization for R
Simulate Survival Data for Randomized Clinical Trials
Nonparametric test of equality between two copulas
Estimate Gene-Treatment Interaction Exploiting Randomization
Process Data from Wearable Research Devices Using Two-Regression
Algorithms
Develop and Apply Two-Regression Algorithms
A Two-Sample Test for the Equality of Distributions for
High-Dimensional Data
Conditional logistic regression: A two-step estimation method
Conditional Logistic Regression: A Two-Step Estimation Method
Estimation of the Weights Attached to the Two-Way Fixed Effects
Regressions
Additiv Two-Way Hazards Modelling of Right Censored Survival Data
Systematic approaches using TW-SLM for incorporating control spots and data quality information to improve normalization of cDNA microarray data.
Functions to Simulate and Conduct Dose-Escalation Phase I
Studies
UBCRM is a R package containing functions to simulate and
conduct dose escalation phase I studies.
An Implementation of Several Approaches to Utility-Based
Learning for Both Classification and Regression Tasks
An Implementation of Re-Sampling Approaches to Utility-Based
Learning for Both Classification and Regression Tasks
Fixes Column Names for Uniform Crime Report "Offenses Known and
Clearance by Arrest" Datasets
Download and Explore Datasets from UCSC Xena Data Hubs
UK Biobank COVID-19 Data Processing and Risk Factor Association
Tests
The UK National Electricity Transmission System Dataset
Unification of Clustering Results from Multiple Datasets using
External Specifications
Tools for creating universal numeric fingerprints for data.
Tools for Creating Universal Numeric Fingerprints for Data
Non-Parametric Cluster Significance Testing with Reference to a
Unimodal Null Distribution
Efficient Bayesian Models for Binary and Categorical Data
Efficient Bayesian Algorithms for Binary and Categorical Data
Regression Models
Unsupervised Photometric Membership Assignment in Stellar
Clusters
Approximate the Variance of the Horvitz-Thompson Total Estimator
Replacement of the 'USGSstates2k' Package
Historical Boundaries of the United States of America, 1629-2000
Historical boundaries of the United States of America, 1629-2000
Historical and Contemporary Boundaries of the United States of
America
United States of America Map with the NAD 1983 Albers Projection
Replaced by 'states2k' -- United States of America Map with the
NAD 1983 Albers Projection
U-Statistic Permutation Tests of Independence for all Data Types
Unsupervised and Supervised methods of Propensity Score Adjustment for Bias
Unsupervised and Supervised methods of Propensity Score
Adjustment for Bias
Create US cancer datasets from SEER, IARC, and US Census data
US Census 2000 Suite of R Packages: Demographic Add
US Census 2000 Block Group Shapefiles and Additional Demographic
Data
US Census 2000 Designated Places Shapefiles and Additional
Demographic Data
US Census 2000 Tract Level Shapefiles and Additional Demographic
Data
US Census 2010 Suite of R Packages: Installers and
helperfunctions for UScensus2010blk, UScensus2010blkgrp,
UScensus2010tract, UScensus2010county, UScensus2010cdp
packages.
The Demand and Supply for Electricity in the US
United States Centers of Population (Centroids)
A Companion Package to the Book "U-Statistics, M-Estimation and
Resampling"
Unbinned weighted histogram analysis method (UWHAM)
Unbinned Weighted Histogram Analysis Method (UWHAM)
Bayesian Analysis of a Non-Informative Parametrization for
Gaussian Mixture Distributions
Bayesian Analysis of Location-Scale Mixture Models using a
Weakly Informative Prior
Visualization of Structures in High-Dimensional Data
Simulating Realistic Gene Expression Data
Simulating Realistic Gene Expression and Clinical Data
Implements Models of Uncertainty into the Interpolation
Functions
Uncertain Area Methods for Cut-Point Determination in Tests
Uncertain Interval Methods for Cut-Point Determination in Tests
Uncertain Interval Methods for Three-Way Cut-Point Determination
in Tests
Uncertain Interval Methods for Three-Way Cut-Point Determination
in Test Results
Unimodal and Isotonic L1, L2 and Linf Regression
Dose-Finding Methods for Non-Binary Outcomes
Retrieving Information of Proteins from Uniprot
Check if Roots of a Polynomial Lie Outside the Unit Circle
A More Scalable Alternative to Venn and Euler Diagrams for
Visualizing Intersecting Sets
An Alternative Visualization of VPA and HP in Canonical Analysis
Data sets for the text  "Using R for Introductory Statistics"
Data sets for the text "Using R for Introductory Statistics"
Data sets, etc. for the text "Using R for Introductory
Statistics", second edition
Data Sets, etc. for the Text "Using R for Introductory
Statistics", Second Edition
Data Sets, Etc. for the Text "Using R for Introductory
Statistics", Second Edition
Implementing EFF-TOX and Monotone Utility Based Phase 12 Trials
Embedded JavaScript and WebAssembly Engine for R
Estimation of bayesian additive structured (quantile) regression
Variational Approximation for Joint Survival and Marker Models
Visualising Splicing at Single-Cell Resolution
VAR modelling: estimation, testing, and prediction
VAR Modelling: Estimation, Testing, and Prediction
Multiple Change Point Detection in Structural VAR Models
An Algorithm for Morphometric Characters Selection and
Statistical Validation in Morphological Taxonomy
Variable Selection Methods Including an Exposure Variable
Shrinkage Estimation Methods for Vector Autoregressive Models
Sign Restrictions, Bayesian, Vector Autoregression Models
Tests for Error Autocorrelation and ARCH Errors in Vector
Autoregressive Models
Tests for Error Autocorrelation, ARCH Errors, and Cointegration
in Vector Autoregressive Models
Variational Bayes Latent Position Cluster Model for networks.
Variational Bayes Latent Position Cluster Model for Networks
The VBMA4hmm (Variational Bayesian Markov Model for hidden
markov model) package
Vector Binary Tree to Make Your Data Management More Efficient
The Variational Bayesian Method for Sparse PCA
Extend the 'copula' Package with Families and Models from
'VineCopula'
Variable, Diversity and Joining Sequences from Various Species
Visualization of Distribution of Selected Model
Statistical Methods for Designing and Analyzing a Calibration
Study
Vaccine Efficacy Over Time - Variant Aware
Vegetated Filter Strip and Erosion Model
Vector Generalized Linear and Additive Models
Additions and Extensions of the 'VGAM' Package
Discrimination/Classification in very high dimension with linear
and quadratic rules.
The Variable Infiltration Capacity (VIC) Hydrological Model
The Variable Infiltration Capacity (VIC) Model
VIF Regression: A Fast Regression Algorithm For Large Data
Detecting Change-Points via VIFCP Method
Variational Bayesian Inference for Genome-Wide Regression
Visualization and Imputation of Missing Values
Visualization and Imputation of Missing Values - Graphical User
Interface
Computation of Volatility Impulse Response Function of
Multivariate Time Series
Frequency Matrix Approach for Assessing Very Low Frequency
Variants in Sequence Records
Variable Length Markov Chains ('VLMC') Models
Variable-Lag Time Series Causality Inference Framework
Variational Mode Decomposition Based Machine Learning Models
Using V-algorithm and Newton-Raphson Method to Obtain
Multiple-objective Optimal Design
Finding Multiple-Objective Optimal Designs for the 4-Parameter
Logistic Model
User Interface for Collecting and Analysing Social Networks
Variable Selection Oriented LASSO Bagging Algorithm
Interactive Document for Working with Variance Analysis
Software for Analysing and Visualising Animal Movement from
Acoustic Telemetry Detections
A Collection of Tools for the Analysis of Remote Acoustic
Telemetry Data
Volume under the ROC Surface for Multi-Class ROC Analysis
Tools for Preprocessing Visual World Data
Computes Value at Risk and Expected Shortfall for over 100
Parametric Distributions
Computes value at risk and expected shortfall for over 100
parametric distributions
Access the 'City of Vancouver' Open Data API
Variance Estimation using Difference-Based Methods
Variable Selection for Model-Based Clustering using the
Integrated Complete-Data Likelihood of a Latent Class Model
Variable Selection for Model-Based Clustering of Continuous,
Count, Categorical or Mixed-Type Data Set with Missing Values
Variable Selection for Model-Based Clustering of Mixed-Type Data
Set with Missing Values
Pricing a variance swap on an equity index
Capture the Genes and Variants Related to a Genetic Disease from
Public Databases
Capture the Genes and Variants Related to a Genetic Disease from
Public Databases and PubMed
Disease-Gene-Variant Relations Mining from the Public Databases
and Literature
: Disease-Gene-Variant Relations Mining from the Public
Databases and Literature
Testing of genotypic variance heterogeneity to detect
potentially interacting SNP.
Testing of Genotypic Variance Heterogeneity to Detect
Potentially Interacting SNP
High-Dimensional Screening for Semiparametric Longitudinal
Regression
A Machine Learning Tool for Genetic Association Studies
Variance Dispersion and Fraction of Design Space Plots
Variance Dispersion, Fraction of Design Space Plots, and
Designs.
Variance Dispersion, Fraction of Design Space Plots, Designs,
and Contour Plots
Plots of Scaled Prediction Variances for Response Surface
Designs
This package creates variance dispersion graphs for response
surface designs
This package creates variance dispersion graphs and fraction of
design space plots for response surface designs
Variance dispersion graphs and Fraction of design space plots
for response surface designs
Vector analysis using graphical and analytical methods in 2D.
Vector analysis using graphical and analytical methods in 2D
Vector Analysis using Graphical and Analytical Methods in 2D
Vector analysis using graphical and analytical methods in 3D.
Vector analysis using graphical and analytical methods in 3D
Generate high-resolution Venn and Euler plots
Generate High-Resolution Venn and Euler Plots
Creates Vertex Similarity Matrix for an Undirected Graph
Network Hierarchical Structure and Randomization
Very Large Integers: Store and Manage Arbitrarily Big Integers
Store and Manage Arbitrarily Large Integers
Store and Operate with Arbitrarily Large Integers
Linear Mixed Models - An Introduction with Applications in
Veterinary Research
A Visual Tool for Behavior Analysis over Time
Access Victorian Spatial Data Through Web File Services (WFS)
Simulation of Populations by Sampling Waiting-Time Distributions
Visualizing of distributions of covariance matrices
Modeling and Forecasting Visitor Counts Using Social Media
Visualisation of Clusters in Multivariate Data
Visualize Downloads from 'CRAN' Packages
Graphical visualization tools for complex observational data
with focus on health sciences (VizOR)
Graphical Visualization Tools for Complex Observational Data
with Focus on Health Sciences
Generic Voss algorithm (random sequential additions)
Generic Voss Algorithm (Random Sequential Additions)
Metrics extraction of trees from T-LiDAR data
Trees Geometry and Morphology from Unstructured TLS Data
The W2CWM2C package is a set of functions to produce new
graphical tools for wavelet correlation (bivariate and
multivariate cases) using some routines from the waveslim and
wavemulcor packages
A Graphical Tool for Wavelet (Cross) Correlation and Wavelet
Multiple (Cross) Correlation Analysis
R Interface to W3C Markup Validation Services
While-Alive Loss Rate for Recurrent Event in the Presence of
Death
Multivariate Weather-State Approach Conditionally Skew-Normal
Generator
Weaning Age Reconstruction with Nitrogen isotope analysis
Weaning Age Reconstruction with Nitrogen Isotope Analysis
Water Cloud Model (WCM) for the Simulation of Leaf Area Index
(LAI) and Soil Moisture (SM) in Satellite Earth Observation
Data
Water Cloud Model (WCM) for the Simulation of Leaf Area Index
(LAI) and Soil Moisture (SM) from Microwave Backscattering
Detection of QTL effects in a small mapping population
Search and download data from the World Bank's World Development
Indicators
World Development Indicators (World Bank)
Search and download data from the World Banks' World Development
Indicators
World Development Indicators and Other World Bank Data
Weighted Estimated Equation (WEE) Approaches in Genetic
Case-Control Studies
A Metric to Rank Locations for Biodiversity Conservation
Weighted Gene Co-Expression Network Analysis
R Client for the World Health Organization API
Variable Selection for Highly Correlated Predictors
Statistical Inference in Weighted Lindley Distribution
Whitening Logistic Regression for Variable Selection
Regression Analysis Based on Win Loss Endpoints
William and Mary Parser For Bruker-Ultraflex Mass Spec Data
GUI implementing Bayesian working memory models
GUI Implementing Bayesian Working Memory Models
Discriminant Analysis Methods by Weight Mahalanobis Distance and
bayes
Plot Connectivity Between Cells from Different Time Points
Weighted Piecewise Kernel Density Estimation
Win Ratio Analysis of Composite Time-to-Event Outcomes
A Collection of Robust Statistical Methods
Weighted Regression for Water Quality Evaluation in Tidal Waters
Compute Wasserstein Barycenters, Geodesics, PCA and Distances
Geometric Tools Based on Balanced/Unbalanced Optimal Transport
Weighted Win Loss Statistics and their Variances
Simulate Rehabilitation Strategies for Water Distribution
Systems
Datasets for Multi-Omics Integration in a Plant Abiotic Stress
Context
Fetch and Analyze Data from WaterML or CUAHSI WaterOneFlow Web
Service
Fetch and Analyze Data from 'WaterML' and 'WaterOneFlow' Web
Services
Spatial Watershed Aggregation and Spatial Drainage Network
Analysis
Wavelet change point detection for array CGH data
Wavelet Changepoint Detection for Array CGH
Estimating Long Memory Parameter using Wavelet
Weakly Associated Vectors (WAVE) Sampling
Wavelet-ARIMA Model for Time Series Forecasting
Fit the Wavelet-GARCH Model to Volatile Time Series Data
Wavelet-RF Hybrid Model for Time Series Forecasting
Wavelet-SVR Hybrid Model for Time Series Forecasting
Data Estimation using Weighted Averages of Multiple Regressions
Semiparametric Proportional Means Regression of Weighted
Composite Endpoint
Weighted Mixed-Effects Models, using Multilevel Pseudo Maximum
Likelihood Estimation
Weighted Mixed-Effects Models Using Multilevel Pseudo Maximum
Likelihood Estimation
Basic and Advanced Statistical Power Analysis
Fits and Plots a Dataset to the Weibull Probability Distribution
Function
Weibull Analysis for Reliability Engineering
Accelerated Life Testing Using 'WeibullR'
Weighting for Covariate Balance in Observational Studies
Subject Weighted Support Vector Machines
Weighted Portmanteau Tests for Time Series Goodness-of-fit
WhatIf: Software for Evaluating Counterfactuals
Whitestripe White Matter Normalization for Magnetic Resonance
Images
White Matter Normalization for Magnetic Resonance Images using
Whitestripe
White Matter Normalization for Magnetic Resonance Images using
WhiteStripe
White Matter Normalization for Magnetic Resonance Images
High-Speed Processing of VCF, FASTA and Alignment Data
Fitting many skinny linear models to a single data set
Derivatives of the Diffusion Density and Cumulative Distribution
Function
Derivatives of the First-Passage Time Density and Cumulative
Distribution Function, and Random Sampling from the (Truncated)
First-Passage Time Distribution
API Client Library for 'Wikidata Query Service'
Read-Write API Client Library for 'Wikidata'
Read-Write API Client Library for Wikidata
Wilcoxon-based variable selection in cross-validation
Win Ratio for Prioritized Outcomes and 95% Confidence Interval
Wamser Misc: Reading Files by Tokens, Stateful Computations,
Utility Functions
Generate Simulated Sawn Timber Strength Grading Data
Fast Matrix Operations via the Woodbury Matrix Identity
Estimates Economic Variables for Word-of-Mouth-Campaigns
Classical word pools used in studies of learning and memory
Classical Word Pools Used in Studies of Learning and Memory
Rendering Word Documents with R Inline Code
Standardize Plant Names According to World Flora Online
Taxonomic Backbone
A Clustering Method for Time-Series Whole-Brain Activity Data of
'C. elegans'
Computes Pdf, Cdf, Quantile, Random Numbers and Provides
Estimation for 40 Univariate Wrapped Distributions
Computes Pdf, Cdf, Quantile, Random Numbers and Provides
Estimation for any Univariate Wrapped Distributions
A Collection of Palettes and Some Functions to Help Use Them
Wright Map: IRT item-person map with ConQuest integration
IRT Item-Person Map with 'ConQuest' Integration
Cross-platform Perl based R function to create Excel 2003 (XLS)
files
Cross-platform Perl based R function to create Excel 2003 (XLS)
and Excel 2007 (XLSX) files
Cross-Platform Perl Based R Function to Create Excel 2003 (XLS)
and Excel 2007 (XLSX) Files
Weighted Method for Multiple-Criteria Decision Making
R Wrapper for the 'Wufoo.com' - The Form Building Service
Extraction of business financial information from XBRL
documents.
Extraction of Business Financial Information from XBRL Documents
Extraction of Business Financial Information from 'XBRL'
Documents
Exploring Genomic Relations at the Gene and SNP Level Through
Enrichment, Similarity and Network Analysis
Exploring Genomic Relations for Enhanced Interpretation Through
Enrichment, Similarity, Network and Annotation Analysis
Exploring Genomic Relations for Precision Interpretation Through
Enrichment, Similarity, Network and Annotation Analysis
Association Measurement Through Cross Rank Increments
JAR dependencies for the XLConnect package
JAR Dependencies for the XLConnect Package
A Modeling Approach that Optimizes Future Errors in Least
Squares
Tools for parsing and generating XML within R and S-Plus.
Tools for Parsing and Generating XML Within R and S-Plus
Markov Random Fields for High-Throughput Genetics Data
Exact Goodness-Of-Fit Test For Multinomial Data With Fixed
Probabilities
Exact Goodness-of-Fit Test for Multinomial Data with Fixed
Probabilities
Xiaobei's miscellaneous classes and functions
Yang and Prentice Model with Baseline Distribution Modeled by
Bernstein Polynomials
Interim Monitoring Using Adaptively Weighted Log-Rank Test in
Clinical Trials
Yang and Prentice Model with Piecewise Exponential Baseline
Distribution
The Short-term and Long-term Hazard Ratio Model for Survival
Data
The Short-Term and Long-Term Hazard Ratio Model for Survival
Data
Data exploration tools from Yale University.
Data Exploration Tools from Yale University
Multivariate Methods Based on Projections and Related Concepts
Yates' Algorithm in 2^n Factorial Experiment
Modelling and estimation of the yield curve
Modelling and Estimation of the Yield Curve
Text Analysis by Yahoo! Japan Develper Network
Plant architectural analysis with Yplant and QuasiMC.
Plant Architectural Analysis with Yplant and QuasiMC
YuGene for comparing gene expression across platforms
YuGene: A simple approach to scale gene expression data derived
from different platforms for integrated analyses
A Simple Approach to Scale Gene Expression Data Derived from
Different Platforms for Integrated Analyses
Simple Ecological Statistics from the NEON Network
Zero-Inflated Beta-Binomial Modeling of Microbiome Count Data
Differential Abundance Analysis for Metagenomic Data via
Zero-Inflated Beta Regression
Zero Inflated Generalized Poisson (ZIGP) regression models
Zero-Inflated Models for Count Time Series with Excess Zeros
Statistical Models for Count Time Series with Excess Zeros
Zero-Inflated Models (ZIM) for Count Time Series with Excess
Zeros
Simulates ZINAR(1) Model and Estimates Its Parameters Under
Frequentist Approach
Simulate INAR/ZINAR(p) Models and Estimate Its Parameters
Bayesian Methods in the Analysis of Zero-Inflated Poisson Model
Permutations Tests and Performance Indicator for Zero-Inflated
Proportions Response
ZOIP Distribution, ZOIP Regression, ZOIP Mixed Regression
Dynamic Plots for Time Series Forecasting
ZeBook - Working with dynamic models for agriculture and
environment
ZeBook Working with dynamic models for agriculture and
environment
Working with Dynamic Models for Agriculture and Environment
Analyze High-Dimensional High-Throughput Dataset and Quality
Control Single-Cell RNA-Seq
R Interface to Zillow Real Estate and Mortgage Data API
Creates a Data Frame of US Zip Codes in a Given Radius from a
Given US Zip Code
A Biomarker Validation Suit for predicting Survival using gene
signature.
aCGH dye bias normalisation and file reading and writing
functions
Robust spline interpolation for dual color array comparative
genomic hybridisation data
Convenience functions for analytical Customer Relationship
Management
Adaptive Set-Based Gene-Environment Interaction Test for Rare
Variants
Testing for Compositional Pathologies in Datasets
aLFQ: An R-package for estimating absolute protein quantities
from label-free LC-MS/MS proteomics data
An R-package for estimating absolute protein quantities from
label-free LC-MS/MS proteomics data
Estimating Absolute Protein Quantities from Label-Free LC-MS/MS
Proteomics Data
Automated Fitting of Moderated Nonlinear Factor Analysis Through
the 'Mplus' Program
Automated Moderated Nonlinear Factor Analysis Using 'Mplus'
Automated Moderated Nonlinear Factor Analysis Using 'M-plus'
Find Arbitrage Opportunities for Sports Matches
Quantitative Structural Model ('QSM') Treatment for Tree
Architecture
An Adaptive Sum of Powered Correlation Test (aSPC) for Global
Association Between Two Random Vectors
Adaptation of Virtual Twins Method from Jared Foster
Mutual information for protein sequence alignments
Access to Abbyy Optical Character Recognition (OCR) API
Functions to perform Approximate Bayesian Computation (ABC)
using simulated data
Tools for Approximate Bayesian Computation (ABC)
Data Only: Tools for Approximate Bayesian Computation (ABC)
Fit Accumulated Damage Models and Estimate Reliability using ABC
ABCDE_FBA: A-Biologist-Can-Do-Everything of Flux Balance
Analysis with this package.
Approximate Bayesian Computation via Random Forests
Asymptotically Bias-Corrected Regularized Linear Discriminant
Analysis
Algorithms for ABC summary statistics selection
Adaptive Base Error Model in Ultra-Deep Sequencing Data
Adaptive Best Subset Selection in Polynomial Time
Load Axon ABF2 files (currently only in gap-free recording mode)
Databases Used Routinely by the Brazilian Jurimetrics
Association
Useful Tools for Jurimetrical Analysis Used by the Brazilian
Jurimetrics Association
Data Modelling with Additive Bayesian Networks
Modelling Multivariate Data with Additive Bayesian Networks
Measure a Subject's Abnormality with Respect to a Reference
Population
R Interface to the A/B Street Transport System Simulation
Software
An R-Shiny Application for Creating Visual Abstracts
Abundant regression and high-dimensional principal fitted
components
High-Dimensional Principal Fitted Components and Abundant
Regression
Access the Twitter Academic Research Product Track V2 API
Endpoint
A Package to Processes Accelerometer Data
Functions for Processing and Analyzing Accelerometer Data
A Canonical Correlation Analysis with Inferential Guaranties
Functions for processing uniaxial minute-to-minute accelerometer
data
Functions for processing minute-to-minute accelerometer data
Functions for Processing Minute-to-Minute Accelerometer Data
Functions for Processing Accelerometer Data
Missing Value Imputation for Accelerometer Data
The Acute COPD Exacerbation Prediction Tool (ACCEPT)
Improving the Accessibility of 'rmarkdown' Documents
Accrual Plots and Predictions for Clinical Trials
Visualization tools for partially accruing data
Data Quality Visualization Tools for Partially Accruing Data
Natural Abundance Correction of Mass Spectrometer Data
Tools for testing and improving accuracy of statistical results.
Optimal Bayesian Experimental Design using the ACE Algorithm
ace() and avas() for selecting regression transformations
ACE and AVAS for Selecting Multiple Regression Transformations
The ACER Method for Extreme Value Estimation
Robust Estimation of the ACF from the M-Periodogram
Analysing Conditional Distributions of Income
Automated Retrieval of ACLED Conflict Event Data
Align-and-Count Method comparisons of RFLP data
Implements ACME Estimator of Bird and Bat Mortality by Wind
Turbines
Modelling dependence with multivariate Archimax (or any
user-defined continuous) copulas.
Modelling Dependence with Multivariate Archimax (or any
User-Defined Continuous) Copulas
Download and manipulate data from the US Census ACS
Download and manipulate data from the US Census American
Community Survey
Download, manipulate, and present data from the US Census
American Community Survey
Download, Manipulate, and Present American Community Survey and
Decennial Data from the US Census
Algorithmic Complexity for Short Strings
Data Only: Algorithmic Complexity of Short Strings (Computed via
Coding Theorem Method)
Generate Activity Counts from Raw Accelerometer Data
A 'Shiny' App to Analyze Accelerometer-Measured Daily Physical
Behavior Data
Advanced Processing and Chart Generation from activPAL Events
Files
Utilities for Parsing and Plotting Activities
Gaussian Process Based Design and Analysis for the Active
Subspace Method
Circular Mixed Effect Mixture Models of Animal Activity Patterns
Read in Activity Data and Plot Actograms
Actuarial Functions and Heavy Tailed Distributions
Create Actuarial Experience Studies: Prepare Data, Summarize
Results, and Create Reports
Performs boosting algorithms for a binary response
ada: an R package for stochastic boosting
The R Package Ada for Stochastic Boosting
Adaptive Huber Estimation and Regression
Applies AdaBoost.M1, AdaBoost-SAMME and Bagging
Applies multiclass AdaBoost.M1, AdaBoost-SAMME and Bagging
Applies Multiclass AdaBoost.M1, SAMME and Bagging
Estimator of the Adherer Average Causal Effect
Discrete and Global Optimization Routines
Archetypoid Algorithms and Anomaly Detection
Adaptive Nature-Inspired Algorithms for Hybrid Genetic
Optimization
Implementation of an Accountable Data Analysis Process
adapt -- multidimensional numerical integration
Adaptive Approaches for Signal Detection in Pharmacovigilance
Bayesian Adaptive Designs for Diagnostic Trials
Adaptive Bioequivalence Design for In-Vitro Permeation Tests
Implementation of a generic adaptive Monte Carlo Markov Chain
sampler
Implementation of a Generic Adaptive Monte Carlo Markov Chain
Sampler
Adaptive P-Value Thresholding for Multiple Hypothesis Testing
with Side Information
Adaptive Smoothing Spline (AdaSS) Estimator for the
Function-on-Function Linear Regression
Adds Labeled Center Line and Scale Lines to Trellis Plots
Adds Labeled Center Line and Scale Lines/Regions to Trellis
Plots
Binomial and Multinomial Additive Hazards Models
Binomial and Multinomial Additive Hazard Models
Fit Additive Hazards Models for Survival Analysis
'RStudio' Addins for Show Outline of a R Markdown/'LaTeX'
Project
Discover and Install Useful RStudio Addins
Bindings for Generalized Additive Models (GAM)
Additive Data Envelopment Analysis Models
Additivity tests in the two way ANOVA with single sub-class
numbers
Additivity Tests in the Two Way Anova with Single Sub-Class
Numbers
Additivity Tests in the Two Way Anova with Single Sub-class
Numbers
Analysis of Environmental Data : Exploratory and Euclidean methods in Environmental sciences
Analysis of Ecological Data : Exploratory and Euclidean methods in Environmental sciences
Analysis of Ecological Data : Exploratory and Euclidean methods
in Environmental sciences
Analysis of Ecological Data: Exploratory and Euclidean Methods
in Environmental Sciences
Analysis of Ecological Data : Exploratory and Euclidean Methods
in Environmental Sciences
Adaptive Density Estimation by Bayesian Averaging
Genetic data handling for multivariate analysis using ade4
The adegenet package for R: classes and methods for the multivariate analysis of genetic markers.
adegenet: a R package for the multivariate analysis of genetic markers.
adegenet: a R package for the multivariate analysis of genetic
markers.
adegenet: an R package for the exploratory analysis of genetic
and genomic data.
Exploratory Analysis of Genetic and Genomic Data
An S4 Lattice-Based Package for the Representation of
Multivariate Data
Analysis of habitat selection by animals
Analysis of Habitat Selection by Animals
adephylo: exploratory analyses for the phylogenetic comparative
method.
Adephylo: Exploratory Analyses for the Phylogenetic Comparative
Method
Exploratory Analyses for the Phylogenetic Comparative Method
A Shiny Application for the (Audio-)Visualization of Adverse
Event Profiles
A 'shiny' Application for the (Audio-)Visualization of Adverse
Event Profiles
Import from and Export to Amiga Disk Files
Get Adform Ads Data via the 'Windsor.ai' API
Assess Medication Adherence from Pharmaceutical Claims Data
calculate ad hoc distance thresholds for DNA barcoding
identification
Calculate Ad Hoc Distance Thresholds for DNA Barcoding
Identification
Computes Sensitivity at a Fix Value of Specificity and Vice
Versa
Computing Sensitivity at a Fix Value of Specificity and Vice
Versa
Parameter and Adjusted Probability Estimation for Right-Censored
Data
Adjacency-Constrained Clustering of a Block-Diagonal Similarity
Matrix
Confounder-Adjusted Survival Curves and Cumulative Incidence
Functions
Remove Automated and Repeated Downloads from 'RStudio' 'CRAN'
Download Logs
Anderson-Darling K-Sample Test and Combinations of Such Tests
Development Tools for the Admiral Package Family
Oncology Extension Package for ADaM in 'R' Asset Library
Package Admix for Admixture (aka Contamination) Models
An Interface for Running 'ADMIXTOOLS' Analyses
Admixture Graph Manipulation and Fitting
Alternating Direction Method of Multipliers to Solve Dense
Dubmatrix Problem
No-U-Turn MCMC Sampling for 'ADMB' and 'TMB' Models
No-U-Turn MCMC Sampling for 'ADMB' Models
Design and Analysis of Locally or Globally Efficient Adaptive
Designs
Interactive R Tutorials to Accompany Field (2016), "An Adventure
in Statistics"
Wavelet Analysis of Genomic Data from Admixed Populations
Download and process AEMO price and demand data
Download and Process AEMO Price and Demand Data
Diagnosis Performance Using Attributable Fraction
Raster Georeferencing, Grid Affine Transforms, Cell Abstraction
Functions for Atomic Force Microscope Force-Distance Curves
Analysis
Diagnostic and Forecasting Functions for ARFIMA models
Estimation, Diagnostic and Forecasting Functions for ARFIMA
models
Tools for Modelling of Animal Flight Performance
Africa Macroeconomic Monitor Database API
Accelerated Failure Time Model with Generalized Estimating
Equations
Accelerated Failure Time for High Dimensional Data with MCMC
Model Diagnostics for Accelerated Failure Time Models
Toolbox for Downloading and Extracting Copernicus AgERA5 Data
Various Methods for Measuring Agreement.
Prior distributions for molecular dating
Estimate individual level risk using individual case data and
spatially aggregated control data
Adaptive Gauss Hermite Quadrature for Bayesian Inference
Extracting and preprocessing Agilent express arrays
Aggregation Operators and Preordered Sets
Tutorial Analysis of Some Agricultural Experiments
Statistical Procedures for Agricultural Research
Visualization of Design of Experiments from the 'agricolae'
Package
Evapotranspiration and Energy Fluxes Spatial Analysis
Calculate Agreement or Consensus in Ordered Rating Scales
Calculate Concentration and Dispersion in Ordered Rating Scales
Stability Analysis for Agricultural Research
Miscellaneous plotting and utility functions
Adaptive and Automatic Gradient Boosting Computations
An R Implementation of the 'Align-GVGD' Method
Regularization for semiparametric additive hazards regression
Regularization for Semiparametric Additive Hazards Regression
An Implementation of the Artificial Hydrocarbon Networks
Analytic Hierarchy Process for Survey Data
Hybrid Method for Multiple Criteria Decision-Making (MCDM)
Tools for reading AIDA (http://aida.freehep.org/) files into R
Help Detect and Mitigate Bias in Machine Learning Models
Irish Weather Observing Stations Hourly Records for 2017
Suite of GR Hydrological Models for Precipitation-Runoff
Modelling
Ensemble-Based Data Assimilation with GR Hydrological Models
'airGR' Integrated Water Resource Management
Teaching Hydrological Modelling with the GR Rainfall-Runoff
Models ('Shiny' Interface Included)”
Teaching Hydrological Modelling with the GR Rainfall-Runoff
Models ('Shiny' Interface Included)
Download Mexico City Pollution, Wind, and Temperature Data
Retrieve 'AirNow' Air Quality Observations and Forecasts
Convenience Tools for Working with Airport Data
Air Quality Measurements in Spain from 2011 to 2018
AIRR Data Representation Reference Library
Evaluation of Algorithm Collections Using Item Response Theory
Additive Isotonic Proportional Hazards Model
Interpolation of irregularly spaced data
Interpolation of Irregularly and Regularly Spaced Data
Adaptive Kmeans algorithm based on threshold
Anchored Kmedoids for Longitudinal Data Clustering
Immunoglobulin Clonal Lineage and Diversity Analysis
PARAFAC Analysis of Fluorescence Excitation-Emission Matrices
Adjusted Limited Dependent Variable Mixture Models
Connectivity to 'Alfresco' Content Management Repositories
Downloading Time Series from ALFRED Database for Various
Vintages
Determine Phytoplankton Functional Groups Based on Functional
Traits
Implement an Address Search Auto Completion Menu on 'Shiny' Text
Inputs Using the 'Algolia Places' 'Javascript' Library
Allows you to Easily Interact with the Algorithmia Platform
Converts Human gene symbols to entrez IDs
Visualizing Multiple Sequence Alignments with 'ggplot2'
Alignment of Phonetic Sequence Using the 'ALINE' Algorithm
Alignment of Phonetic Sequences Using the 'ALINE' Algorithm
Pre-Processing XY Data from Experimental Methods
Acknowledge all Contributors to a Project
Allele simulation and Haplotype reconstruction from pedigree
databases
Allele Imputation and Haplotype Reconstruction from Pedigree
Databases
Identification of unique multilocus genotypes
Identifying unique multilocus genotypes where genotyping error
and missing data may be present
Identifying Unique Multilocus Genotypes where Genotyping Error
and Missing Data may be Present
A fast, unbiased and exact allelic exact test
Extract Past Sales Data from Allhomes.com.au
Removing Allometric Effects of Body Size in Morphological
Analysis
R wrapper to the almetrics API platform developed by PLoS
R Wrapper to the Almetrics API Platform Developed by PLOS
R Client for the Lagotto Altmetrics API Platform.
R Client for the Lagotto Altmetrics Platform
Model Classifier for Binary Classification
Fit GLM's with High-Dimensional k-Way Fixed Effects
Obtain Alpha-Outlier Regions for Well-Known Probability
Distributions
Algorithms for High-Throughput Sequencing of Antigen-Specific T
Cells
Confidence Intervals for Coefficient Alpha and Standardized
Alpha
Generalization of the Convex Hull of a Sample of Points in the
Plane
Implementation of the 3D alpha-shape for the reconstruction of
3D sets from a point cloud
Implementation of the 3D Alpha-Shape for the Reconstruction of
3D Sets from a Point Cloud
Lightweight R Interface to the Alpha Vantage API
Adaptive Lasso Quantile Regression with Fixed Effects
Methods and data to accompany Applied Linear Regression 3rd edition
Methods and data to accompany Applied Linear Regression 3rd
edition
Data to accompany Applied Linear Regression 3rd edition
Data to Accompany Applied Linear Regression 3rd Edition
Data to accompany Applied Linear Regression 4rd edition
Data to Accompany Applied Linear Regression 4th Edition
Alternative Estimators to Adjusted R-Squared
Use 'Docsify.js', 'Docute', or 'Mkdocs' to Generate a Package
Documentation
An 'API' Client for the 'Alteryx' Gallery
Provides an Interface to the NREL Alternate Fuels Locator
Alternating Manifold Proximal Gradient Method for Sparse PCA
An Interface to the 'AutoNavi Maps' API Geocoding Services
Thin Wrapper for Mapping Library 'AMap' by 'AutoNavi'
Get Amazon Ads Data via the 'Windsor.ai' API
Additive Models for Business Applications
Automated Model Benchmarking Package for the Canadian Land
Surface Scheme
Automated Model Benchmarking for the Canadian Land Surface
Scheme
Simulation and Estimation of Ambit Processes
European Commission Annual Macro-Economic (AMECO) Database
Adaptive Management of Epidemiological Interventions
Anomaly Detection with Normal Probability Functions
Additive and multiplicative effects modeling of networks and
relational data
Additive and Multiplicative Effects Models for Networks and
Relational Data
American Politics-Inspired Color Palette Generator
Additive Main Effects and Multiplicative Interaction Model
Stability Parameters
Statistical Test for the Multivariate Point Null Hypotheses
An Algorithm for Automatic Peak Detection in Noisy Periodic and
Quasi- Periodic Signals
An Algorithm for Automatic Peak Detection in Noisy Periodic and
Quasi-Periodic Signals
Compute High Dimensional Orthant Probabilities
Simple and Canonical Correspondence Analysis.
Simple and Canonical Correspondence Analysis
Analogue and weighted averaging methods for palaeoecology
Analogue and Weighted Averaging Methods for Palaeoecology
Additional functions for use with the analogue package
Additional Functions for Use with the Analogue Package
Compose Interoperable Analysis Pipelines & Put Them in
Production
Regression Outlier Detection and Other Tools for Data Analysis
Regression Outlier Detection, Stationary Bootstrap, Testing Weak
Stationarity, and Other Tools for Data Analysis
Regression Outlier Detection, Stationary Bootstrap, Testing Weak
Stationarity, NA Imputation, and Other Tools for Data Analysis
Model Layer for Automatic Data Analysis via CSV File
Interpretation
Data Analysis and Automated R Notebook Generation
Bidirectional connector to Anametrix API
Bidirectional Connector to Anametrix API
Post-Processing for the Method of Anchored Distributions
Statistical analysis of surveys with anchoring vignettes
Construct Natural-Language Lists with Internationalization
Make Spectroscopic Data Processing Easier
ANES Raking Implementation and Weighted Statistics
Adaptive Neuro Fuzzy Inference System in R
Mesh Topology and Visualization for Spatial Data
Tools for 'ROMS' the Regional Ocean Modeling System
Inferring Dominance Hierarchies and Estimating Uncertainty
Extended Kalman Filters for Animal Movement
Animal track reconstruction for high frequency 2-dimensional
(2D) or 3-dimensional (3D) movement data.
A Gallery of Animations in Statistics and Utilities to Create
Animations
A gallery of animations in statistics and utilities to create
animations
Animated Interactive Grammar of Graphics
A Collection of ML Tools for Conservation Research
Animation of Multiple Trajectories with Uncertainty
Animation of Observed Trajectories Using Spline-Based
Interpolation
Animate Shiny and R Markdown Content when it Comes into View
Image Annotation and Polygon Outlining using Free Drawing
Integrated Framework to Annotate Genetic Variants
A Non-Parametric Statistical Test to Compare Clustering
Structures
Implementation of Augmented Network Log Anomaly Detection
Procedures
Anonymize Data Containing Personally Identifiable Information
Create Datasets with Identical Summary Statistics
Import, Manipulate and Explore the Results of an Antares
Simulation
Import, Manipulate and Explore the Results of an 'Antares'
Simulation
Computation of the WHO Child Growth Standards
Computation of the WHO 2007 References for School-Age Children
and Adolescents (5 to 19 Years)
Extract Text from Microsoft Word Documents
Install and Load Any Package from CRAN, Bioconductor or Github
Download Air Travel Data for Specified Years and Airports
Query `nycflights13`-Like Air Travel Data for Given Years and
Airports
Query 'nycflights13'-Like Air Travel Data for Given Years and
Airports
Anything to 'POSIXct' or 'Date' Converter
Analysis of Overdispersed Data using S3 methods
Analysis of Overdispersed Data using S3 Methods
Ontogenetic Shifts in Central-Place Foraging Insects
Data from the 'Access to Opportunities Project (AOP)'
aoristic analysis with spatial output (kml)
Accelerated Oblique Random Survival Forests
Format Outputs of Statistical Tests According to APA Guidelines
Create American Psychological Association (APA) Style Tables
Create R Markdown Text for Results in the Style of the American
Psychological Association (APA)
An Implementation of the Additive Polynomial Design Matrix
Apercu is Giving you a Quick Look at your Data
Phylogenetic Methods for Multiple Gene Data
Create Interactive Chart with the JavaScript 'ApexCharts'
Library
Analysis with Profile Hidden Markov Models
Statistical Inference and Prediction of Annotations in
Phylogenetic Trees
Functions and Data Sets for the Book "A Progressive Introduction
to Linear Models"
Interface to 'episensr' for Sensitivity Analysis of
Epidemiological Results
Datasets from Hosmer, Lemeshow and Sturdivant, "Applied Logistic
Regression" (3rd ed.)
Datasets from Hosmer, Lemeshow and Sturdivant, "Applied Logistic
Regression" (3rd Ed., 2013)
Decorate a 'ggplot' with Associated Information
Another Plot PACKage: stem.leaf, bagplot, faces, spin3R, ...
Another Plot PACKage: stem.leaf, bagplot, faces, spin3R, and
some slider functions
Another Plot PACKage: stem.leaf, bagplot, faces, spin3R,
plotsummary, plothulls, and some slider functions
Another Plot Package: 'Bagplots', 'Iconplots', 'Summaryplots',
Slider Functions and Others
Pre- and Postprocessing for AP-MS data analysis based on
spectral counts
Tools for Estimating Discrete Choice Models
Tools for Choice Model Estimation and Application
Accurate Parentage Analysis in the Absence of Guiding
Information
Compute Appell's F1 hypergeometric function
Approximate Path for Penalized Likelihood Estimators
Get Apple Search Ads Data via the 'Windsor.ai' API
'Apple App Store' and 'iTunes' Data Extraction
A Compilation of Applicability Domain Methods
Amyloid Propensity Prediction Neural Network
Approximate and Exact Optimal Transport Methods
Bayesian prediction of complex computer codes
Bayesian Prediction of Complex Computer Codes
Approximately Optimal Fine Balance Matching with Multiple Groups
Datasets from Draper and Smith "Applied Regression Analysis"
(3rd ed.)
Datasets from Draper and Smith "Applied Regression Analysis"
(3rd Ed., 1998)
Datasets from Draper and Smith "Applied Regression Analysis"
(3rd ed., 1998)
Tools for the a Priori Comparison of Regression Modelling
Strategies
Amdahl's profiler, directed optimization made easy.
Amdahl's Profiler, Directed Optimization Made Easy
Edit, run and evaluate APSIM simulations from R easily
Edit, Run and Evaluate APSIM Simulations Easily Using R
Inspect, Read, Edit and Run 'APSIM' "Next Generation" and
'APSIM' Classic
apsrtable model-output formatter for social science
Visualize Population Pyramids Aggregated by Age
Functions to help display air quality model output and
monitoring data
Interface methods to access use an ActiveQuant Master Server
Interface methods to use with an ActiveQuant Master Server
Access to Aquo domaintables from R (Dutch)
Simulate Auto Regressive Data from Precision Matricies
Example Datasets from Archaeological Research
Refitting and Stratigraphic Analysis in Archeology
Refitting and Spatial Analysis in Archaeology
Finds the Archetypal Analysis of a Data Frame
An Archetype for Data Mining and Data Science Projects
Plant Root System Architecture Analysis Using DART Output Files
Plant Root System Architecture Analysis Using DART and RSML
Files
Multi-Format Archive and Compression Support
Retrieve Archived Web Pages from the 'Internet Archive'
Tools for storing, restoring and searching for R objects
Tools for Storing, Restoring and Searching for R Objects
Tools for Archiving, Managing and Sharing R Objects via GitHub
Load ARCOS Prescription Data Prepared by the Washington Post
Processing and Physical Activity Summaries of Minute Level
Activity Data
Linear and Nonlinear Autoregressive Distributed Lag Models
Linear and Nonlinear Autoregressive Distributed Lag Models:
General-to-Specific Approach
Harmonise and Integrate Heterogeneous Areal Data
Plot Stacked Areas and Confidence Bands as Filled Polygons
Plots, Summary Statistics and Tools for Arena Simulation Users
Arena for the Exploration and Comparison of any ML Models
Activated Region Fitting, fMRI data analysis (3D).
Fractional ARIMA (and Other Long Memory) Time Series Modeling
Accurate Estimation of Influenza Epidemics using Google Search
Data
Command line optional and positional argument parser.
Command Line Optional and Positional Argument Parser
Random Variate Generator for the Argus Distribution
Efficient Computations of Standard Clustering Comparison
Measures
Archive and Unarchive Databases Using Flat Files
Data Analysis Using Regression and Multilevel/Hierarchical Models
Data Analysis Using Regression and Multilevel/Hierarchical
Models
A Statistical Methodology to Select Covariates in
High-Dimensional Data under Dependence
Adaptive Rejection Metropolis Sampling (ARMS) via 'Rcpp'
Analysis of large Affymetrix microarray data sets
Analysis of Large Affymetrix Microarray Data Sets
A probe-level data file format used by aroma.affymetrix
[DEPRECATED]
A Probe-Level Data File Format Used by 'aroma.affymetrix'
[deprecated]
Copy-number analysis of large microarray data sets
Copy-Number Analysis of Large Microarray Data Sets
Support package for aroma.affymetrix et al.
Core methods and classes used by aroma.* package part of The
Aroma Project
Core methods and classes used by aroma.* packages part of The
Aroma Framework
Core Methods and Classes Used by aroma.* Packages Part of The
Aroma Framework
Core Methods and Classes Used by 'aroma.*' Packages Part of the
Aroma Framework
Application in R for Queueing Analysis and Simulation
Apply a Function to a Margin of an Array
Fast Generators and Iterators for Permutations, Combinations and
Partitions
Fast Generators and Iterators for Permutations, Combinations,
Integer Partitions and Compositions
Exploratory analysis of Missing patterns for microarray data
An Arsenal of 'R' Functions for Large-Scale Statistical
Summaries
Analysis and Simulation of Environmental DNA Experiments
Mining Association Rules and Frequent Itemsets with R
Mining Association Rules and Frequent Itemsets
Classification Based on Association Rules
Mining NB-Frequent Itemsets and NB-Precise Rules
arulesViz - Visualizing Association Rules
arulesViz - Visualizing Association Rules and Frequent Itemsets
Visualizing Association Rules and Frequent Itemsets
Assign Random Colors to Unique Items in a Vector
Average Shifted Visual Predictive Checks
Data Sets for "Applied Survival Analysis Using R""
A collection of statistical tools for biologists
A Collection of Statistical Tools for Biologists
Export R objects to asciidoc or txt2tags
Export R objects to several markup languages
Export R Objects to Several Markup Languages
Reads 'SPSS' and 'SAS' Files from ASCII Data Files (.txt) and
Setup Files (.sps or .sas)
Reads Fixed-Width ASCII Data Files (.txt or .dat) that Have
Accompanying Setup Files (.sps or .sas)
Create 'Ascii' Screen Casts from R Scripts
Simulate the Spread of Ascochyta Blight in Chickpea
Augmented SCRDA: improved rda classifier using nearest neighbor
autocovariate
Simulations for adaptive seamless designs
Simulations for Adaptive Seamless Designs
Methods for Adaptive Shrinkage, using Empirical Bayes
Interface to the Algorithm Selection Benchmark Library
Animal Social Network Inference and Permutations for Ecologists
A collection of functions for estimating centrographic statistcs and computational geometries from spatial point patterns
A collection of functions for estimating centrographic statistcs
and computational geometries for spatial point patterns
A collection of functions for estimating centrographic
statistics and computational geometries for spatial point
patterns
A General Framework for Multivariate Analysis with Optimal
Scaling
Analysis of Symmetry of Parasitic Infections
Spline Regression with Adaptive Knot Selection
Augments the Use of 'Asreml' in Fitting Mixed Models
Augments the Use of 'ASReml-R' in Fitting Mixed Models
Augments 'ASReml-R' in Fitting Mixed Models and Packages
Generally in Exploring Prediction Differences
Verbose Assertions for Tabular Data (Data.frames and
Data.tables)
Readable check functions to ensure code integrity.
Readable Check Functions to Ensure Code Integrity
A Lightweight Core of the 'assertive' Package
Assertions to Check Properties of Strings
Assertions to Check Properties of Dates and Times
Assertions to Check Properties of Matrices
Assertions to Check Properties of Models
Assertions to Check Properties of Numbers
Assertions to Check Properties of Variables
Assertive Programming for R Analysis Pipelines
Population Assignment using Genomic, Non-Genetic or Integrated
Data in a Machine-Learning Framework
Population Assignment using Genetic, Non-Genetic or Integrated
Data in a Machine Learning Framework
Infer Geographic Origin from Isotopic Data
A Suite of S-Plus Functions Implementing Smoothing Splines
A Suite of R Functions Implementing Spline Smoothing Techniques
Implements New and Existing Association Indices for Constructing
Animal Social Networks
Calculate the Assortativity Coefficient of Weighted and Binary
Networks
Translates a R Function into an External Pointer to a C++
Function
Translates an R Function to a C++ Function
Astronomy: time and position functions, misc. utilities
Astronomy: Time and Position Functions, Misc. Utilities
A Computational Tool for Astrochronology
Applied Statistical Time Series Analysis
Adaptive SURE Thresholding Using Side Information
Data on Asylum and Resettlement for the UK
Asymmetric Linkage Disequilibrium (ALD) for Polymorphic Genetic
Data
The Slide-Vector Model for Multidimensional Scaling of
Asymmetric Data
Multidimensional Scaling of Asymmetric Data
Multidimensional Scaling of Asymmetric Proximities
Asymmetry Measures for Probability Density Functions
A Simple R Package for Classical Parametric Statistical Tests
and Confidence Intervals in Large Samples
Estimate Asymptomatic Cases via Capture/Recapture Methods
Asynchronous Code Constructs: Generators, Yield, Async, Await
Calculate Power  Utilizing Asymptotic Likelihood Ratio Methods
Calculate Power Utilizing Asymptotic Likelihood Ratio Methods
Create Tables for Reporting Clinical Trials
Process and Visualise Output from Atlantis Models
Automatically Tuned Markov Chain Monte Carlo
Tools to Handle and Publish Metadata as 'Atom' XML Format
Support Querying Axibase Time-Series Database
Correcting for Attenuation Due to Measurement Error
Evaluation and comparison of expression data and GRNs
Tools for Attribute VSI CUSUM Control Chart
Standard Conform Pure Tone Audiometry (PTA) Plots
Automatic Tracing and Display of Changes to Row Count
Model Audit - Verification, Validation, and Error Analysis
Automatic Dynamic Regression using Extreme Gradient Boosting
Analysis of Data with Mixed Measurement Error and
Misclassification in Covariates
Analysis of Augmented Randomised Complete Block Designs
eBird Data Extraction and Processing with AWK
eBird Data Extraction and Processing in R
Area Under Minimum of False Positives and Negatives
Generates PFA Documents from R Code and Optionally Runs Them
Bayesian sampler of the trait-evolutionary process
Secure Authentication in Shiny with Auth0
Automatic Variable Reduction Using Principal Component Analysis
Learning to Rank Bagging Workflows with Metalearning
Automated Covariate Selection Using HDPS Algorithm
Automatic Construction of Forced-Choice Tests
Algorithms for Automatically Fitting MFA Models
Automatic Linear and Logistic Regression and Survival Analysis
Performs Specification Search in Structural Equation Models
Automatic Model Selection and Prediction for Univariate Time
Series
An implementation of sparse autoencoder for automatic learning
of representative features from unlabeled data.
Sparse Autoencoder for Automatic Learning of Representative
Features from Unlabeled Data
Semi-Automatic Grading of R and Rmd Scripts
High Dimensional Bayesian Survival Mediation Analysis
Automated Generation of Data-Informed GLM Models in Task-Based
fMRI Data Analysis
Display Multiple Images with Scaled Colors
Multiple Heat Maps for Projected Coordinates
Automagically Document and Install Packages Necessary to Run R
Code
Autologistic and Automultinomial Spatial Regression and Variable
Selection
Auto-Generate Changelog using Conventional Commits
Automatic Generation of Interactive Visualizations for Popular
Statistical Results
Automatic Generation of Interactive Visualizations for
Statistical Results
pls regression with backward selection of predictors
Partial Least Squares Regression with Backward Selection of
Predictors
Automatic Transformation of an 'R' Function into a 'shiny' App
An R Port of the 'ImageJ' Plugin 'Auto Threshold'
Automated Vector Autoregression Models and Networks
Check if the Title of a Package is Available, Appropriate and
Interesting
Calculation of Average Population Attributable Fractions and
Confidence Intervals
Financial Analysis Tools Using Data from 'Alpha Vantager'
A computational biologist's toolkit to get data from avidaDB
A Computational Biologist’s Toolkit To Get Data From ‘avidaDB’
A Computational Biologist’s Toolkit To Get Data From 'avidaDB'
Convert Dates to Arbitrary Week Definitions
Client for the Amazon Alexa Web Information Services API
Communicating with AWS EC2 and ECS using AWS REST APIs
'AWS Key Management Service' Client Package
Class and Methods definitions for packages aws, adimpro, fmri,
dwi
Class and Methods Definitions for Packages 'aws', 'adimpro',
'fmri' and 'dti'
Class and Methods Definitions for Packages 'aws', 'adimpro',
'fmri', 'dwi'
Boilerplate R Access to the Amazon Web Services ('AWS') Java SDK
Novel Statistical Test for Aberration Enrichment
Interface to the 'Azure Machine Learning' 'SDK'
Adaptive differential evolution, b6e6rl variant
bPeaks: a simple and intuitive approach for detection of basic
peaks (bPeaks) from ChIP-seq data
bPeaks: an intuitive peak-calling strategy to detect
transcription factor binding sites from ChIP-seq data in small
eukaryotic genomes
Estimating the Accuracy and the Status of Point Occurrence
Records
A Method to Estimate the Accuracy and Biogeographical Status of
Georeferenced Biological Data
Labelling, Tracking, and Collecting Data from Biological Samples
Label Creation for Tracking and Collecting Data from Biological
Samples
Quantifying Habitat-Induced Acoustic Signal Degradation
Bayesian Bacterial Growth Curve Analysis in R
Gene Orthologs for Model Organisms in a Tidy Data Format
Use 'nlmixr2' to Interact with Open Source and Commercial
Software
Talking to 'Docker' and 'Singularity' Containers
Bayesian Classification and Information Sharing (BaCIS) Tool for
the Design of Multi-Group Phase II Clinical Trials
Learning Causal Cyclic Graphs from Unknown Shift Interventions
Extracts the Backbone from Weighted Graphs
Backfitted independent values of Richards curves
Reimplementations of Functions Introduced Since R-3.0.0
Exploring portfolio-based hypotheses about financial instruments
Exploring portfolio-based conjectures about financial instruments
Exploring portfolio-based conjectures about financial
instruments
Exploring Portfolio-Based Conjectures About Financial
Instruments
Create Badges for 'Travis', 'Repostatus' 'Codecov.io' Etc in
Github Readme
Ensemble bagging and boosting classifiers
Robust Explainable Outlier Detection Based on OutlierTree
Bagged Cross-Validation for Kernel Density Bandwidth Selection
Bagging Bandwidth Selection in Kernel Density and Regression
Estimation
Filter Covariance and Correlation Matrices with
Bootstrapped-Averaged Hierarchical Ansatz
Bayes Factors for Informative Hypotheses
Bayesian Analysis of Item Response Theory Models
Library Driven Compound Profiling in GC-MS Data
Library Driven Compound Profiling in Gas Chromatography - Mass
Spectrometry Data
Analyze and Compare Nucleotide Recoding RNA Sequencing Datasets
Visualize Balances of Compositional Data
Access to Current and Historical Basketball Data
High Dimensional Bayesian Mediation Analysis
Protein Secondary Structure Prediction Using the Bamboo Method
Bayesian Meta-Analysis of diagnostic test data
Bayesian Meta-Analysis of Diagnostic Test Data
Bayesian Additive Models for Location Scale and Shape (and
Beyond)
Bayesian Additive Models for Location, Scale, and Shape (and
Beyond)
Bayesian Age-Period-Cohort Modeling and Prediction
Functions for simple A/B split test and multi-armed bandit
analysis
Functions for Simple a/B Split Test and Multi-Armed Bandit
Analysis
Provides Ready to Use Shapefiles for Geographical Map of
Bangladesh
Make Banner Comments with a Consistent Format
Batch Effect Removal (in Phenotype Prediction using Gene Data)
Batch Effect Removal and Addon Normalization (in Phenotype
Prediction using Gene Data)
Complete Works of William Shakespeare in Tidy Format
Minimal Bar Plots and Surface Plots in 3D
Heatmap-Related Plots and Smooth Multiband Color Interpolation
Multivariate Function Visualization and Smooth Multiband Color
Interpolation
Contour Plots, 3D Plots, Vector Fields and Heatmaps
Bayesian Additive Regression Trees using Bayesian Model
Averaging
Causal Inference using Bayesian Additive Regression Trees
bartMachine: Bayesian Additive Regression Trees
Bayesian Additive Regression Trees for Confounder Selection
Bayesian Variable Selection with Shrinking and Diffusing Priors
Convert Regression Between Base Function and 'rms' Package
Fast and URL-Safe Base64 Encoder and Decoder
Sabermetrics and Advanced Baseball Statistics
Utilities for Streamlined Data Import, Imputation and Modelling
Infrastructure for Computing with Basis Functions
Plot Simple Features with 'base' Sensibilities
Trace Plots, Density Plots and Chain Comparisons for MCMC
Samples
Add Trendline of Basic Regression Models to Plot
Add Trendline and Confidence Interval of Basic Regression Models
to Plot
A Package to Recover a Basic Space from Issue Scales
Recovering a Basic Space from Issue Scales
Construct Rich Tables for Output to 'HTML'/'Excel'
Retrieval and Processing of the Spanish National Forest
Inventory
Exact Calculation of Basket Trial Operating Characteristics
Big Data Statistical Analysis for High-Dimensional Models
Managing Packages Removal and Installation
Batching Routines in Parallel and Passing Command-Line Arguments
to R
Consistent Batch Means Estimation of Monte Carlo Standard Errors
Semi-Supervised Bayesian Mixture Models Incorporating Batch
Correction
Convert Categorical Representations of Logicals to Actual
Logicals
An R Package for Data Reduction by Battery Reduction
Bayesian Multidimensional Scaling and Choice of Dimension
Bayesian Estimation and Optimisation of Expected False Discovery
Rate
User Friendly Bayesian Data Analysis for Psychology
Bayesian Inference on a GPU using OpenCL
Simulation and Analysis of Adaptive Bayesian Clinical Trials
Tools for the Bayesian Discount Prior Function
Implementation of the Bayesian Discount Prior Approach for
Clinical Trials
The Bayesian Dynamic Conditional Correlation GARCH Model
Methods and Tools for Bayesian Dynamic Conditional Correlation
GARCH(1,1) Model
Graphical User Interface for bayesTFR and bayesLife
Graphical User Interface for bayesTFR, bayesLife and bayesPop
Fit Multivariate Response Generalized Additive Models using
Hamiltonian Monte Carlo
Bayesian Estimation of the GARCH(1,1) Model with Student's t Innovations
Bayesian Estimation of the GARCH(1,1) Model with Student-t Innovations
Bayesian Estimation of the GARCH(1,1) Model with Student-t
Innovations
Functions to implement Generalized Direct Sampling
Scalable Rejection Sampling for Bayesian Hierarchical Models
Bayesian Methods for Image Segmentation using a Potts Model
Bayesian Inference of Landscape Occupancy from Presence-Only
Data
Mixtures-of-Experts Markov Chain Clustering and Dirichlet
Multinomial Clustering
Bayesian Inference for Presence-Only Data
Bayesian Survival Regression with Flexible Error and (later on also Random Effects) Distributions
Bayesian Survival Regression with Flexible Error and Random Effects Distributions
Bayesian Survival Regression with Flexible Error and Random
Effects Distributions
Bayesian Zero-Inflated Bernoulli Regression Model
Bayesian Estimation of the Additive Main Effects and
Multiplicative Interaction Model
Bayesian Inference in the Analysis of Variance via Markov Chain
Monte Carlo in Gaussian Mixture Models
Miscellaneous Functions for Bioinformatics and Bayesian
Statistics
An Implementation of Rubin's (1981) Bayesian Bootstrap
Tests/Searches for significant clusters in genetic data.
Bayesian analysis of count distributions with JAGS
Bayesian analysis of count distributions using MCMC
Power calculations and Bayesian analysis of count distributions
and FECRT data using MCMC
Power Calculations and Bayesian Analysis of Count Distributions
and FECRT Data using MCMC
Bayesian Dynamic Factor Analysis (DFA) with 'Stan'
Bayesian Estimation of the ETAS Model for Earthquake Occurrences
Linear Combinations of Bayesian Posterior Samples
Efficient Sampling for Gaussian Linear Regression with Arbitrary
Priors
Bayesian Analysis of Contingency Table Data
Adjust Longitudinal Regression Models Using Bayesian Methodology
Bayesian Random-Effects Meta-Analysis and Meta-Regression
The 'Tidymodels' Extension for Bayesian Models
Non-Parametric Bayesian Analyses of Animal Movement
A Bayesian No-Effect- Concentration (NEC) Algorithm
Numerical Integration for Bayesian Inference
Hierarchical Bayesian analysis of ecological count data
Bayesian Regression Models with Continuous Shrinkage Priors
Bayesian Regression Models with Global-Local Shrinkage Priors
Datasets and Supplemental Functions from Bayes Rules! Book
Effect Size Targeted Bayesian Two-Sample t-Tests via Markov
Chain Monte Carlo in Gaussian Mixture Models
Understand and Describe Bayesian Models and Posterior
Distributions
Visually Learning the Graphical Structure of Bayesian Networks
and Performing MCMC with 'Stan'
Global Bayesian Foraminifera Core Top Calibration
Computation of Bayes Factors for Common Biomedical Designs
Bayesian analysis of multivariate binary data
Bayesian fitting of Ornstein-Uhlenbeck models to phylogenies
Bayesian Fitting of Ornstein-Uhlenbeck Models to Phylogenies
Bayesian Stability Analysis of Genotype by Environment
Interaction (GEI)
Identification of Bull and Bear States of the Market
Bayesian bandwidth estimation for functional kernel regression
with unknown error density
Bayesian bandwidth estimation for the functional kernel
regression with unknown error density
Bayesian bandwidth estimation and semi-metric selection for the
functional kernel regression with unknown error density
Bayesian bandwidth estimation for multivariate kernel regression
Bayesian bandwidth estimation for multivariate kernel regression
with Gaussian error
Tools for general maximum likelihood estimation
Tools for General Maximum Likelihood Estimation
Bessel and Beta Regressions via Expectation-Maximization
Algorithm for Continuous Bounded Data
Bayesian Methods and Graphical Model Structures for Statistical
Modeling
Hierarchical Bayesian Analysis of North American BBS Data
Gene Regulatory Network Inference with Bc3net
Bias-Corrected Methods for Estimating the ROC Surface of
Continuous Diagnostic Tests
Advanced Analysis of B Cell Receptor Repertoire Data
Bias Corrected Bootstrap Confidence Intervals
Search and Retrieve Data from the BC Data Catalogue
Causal Inference for a Binary Treatment and Continuous Outcome
using Bayesian Causal Forests
Semiparametric Bivariate Correlated Frailty Model
Bivariate Correlated Frailty Models with Varied Variances
Bayesian Constrained Generalised Linear Models
Bayesian clustering using spike-and-slab hierarchical model,
suitable for clustering high-dimensional data.
Bayesian Hierarchical Clustering Using Spike and Slab Models
Map Layers and Spatial Utilities for British Columbia
Mixed Effect Model with the Box-Cox Transformation
Bringing to light significant Columns correlated with Organism
Labels
A Package for Performing a Bayesian Analysis of Change Point Problems
A Package for Performing a Bayesian Analysis of Change Point
Problems
Bayesian Analysis of Change Point Problems
Behavioral change point analysis of animal movement
Behavioral Change Point Analysis of Animal Movement
Bayesian Multiple Changepoint Detection Using Metadata
Bayesian continuous reasssessment method (CRM) designs for Phase
I dose-finding trials.
Bayesian continuous reassessment method (CRM) designs for Phase
I dose-finding trials.
Bayesian continual reassessment method (CRM) designs for Phase I
dose-finding trials.
Bayesian Continual Reassessment Method for Phase I
Dose-Escalation Trials
Bayesian Compressive Sensing Using Laplace Priors
Cross-Validation for the SVD (Bi-Cross-Validation)
Darwinizer: Darwin Core (DwC) Field Names Standardization
Algorithms for Binned/Weighted Data Analysis
Density Estimation for Binned/Weighted Data
A User-Friendly Biodiversity Data Cleaning App for the
Inexperienced R User
Transparent and Reproducible Artificial Data Generation
Bayesian Discrete Ordered Classification of DNA Barcodes
Optimisation of Bayesian Decision Problems
Inference and design for predictive values in binary diagnostic
tests
Inference and Design for Predictive Values in Diagnostic Tests
Bayesian Detection of Potential Risk Using Inference on Blinded
Safety Data
Remove weekends and holidays from ggplot2 axes
Remove Weekends and Holidays From ggplot2 Axes
Remove Weekends and Holidays from ggplot2 Axes
Routines for Block Diagonal Symmetric matrices
Routines for Block Diagonal Symmetric Matrices
Analysis of Illumina BeadArray SNP data including MSV markers
Analysis of Multiplex Cytometric Bead Assays
Fast Bayesian Inference in Large Gaussian Graphical Models
Visualization via Beanplots (like Boxplot/Stripchart/Violin
Plot)
Visualization via Beanplots (Like Boxplot/Stripchart/Violin
Plot)
Bayesian Analysis of Heterogeneous Treatment Effect
Bioavability and Bioequivalence data analysis with crossover design (ABE)
Bioequivalence and Bioavability data analysis with crossover design (ABE)
Average bioequivalence and bioavailability data analysis tool
Data Analysis Tool for Average Bioequivalence and
Bioavailability
Bayesian Estimation of Change-Points in the Slope of
Multivariate Time-Series
Heartbeat Detection in Electrocardiogram Data
Genomic Region Processing using Tools Such as Bedtools, Bedops
and Tabix
Genomic Region Processing using Tools Such as BEDtools, BEDOPS
and Tabix
Genomic Region Processing using Tools Such as 'BEDTools',
'BEDOPS' and 'Tabix'
Easily Play Notification Sounds on any Platform
The bee swarm plot, an alternative to stripchart.
The bee swarm plot, an alternative to stripchart
The Bee Swarm Plot, an Alternative to Stripchart
Tools for Behavior Change Researchers and Professionals
Canonical Data Structure for Behavioural Data
Download Historical Data from the Belgrade Stock Exchange
Boltzmann Entropy of a Landscape Gradient
Contains basic functions to manipulate belief functions and
associated mass assignments
Count Regression Models Based on the Bell Distribution
28 benchmark densities from Berlinet/Devroye (1994)
High Precise Measurement of R Expressions Execution Time
Benford Analysis for data validation and forensic analytics
Benford Analysis for Data Validation and Forensic Analytics
Bent-Cable Regression for Independent Data or Autoregressive Time Series
Bent-Cable Regression for Independent Data or Autoregressive
Time Series
Function Collection Related to Plotting and Hydrology
function collection related to hydrology, zooming and shapefiles
Function Collection related to Hydrology, Zooming and Plotting
Function Collection related to Plotting and Hydrology
Burden Estimate of Common Communicable Diseases in Settlements
of Displaced Populations
Best Subset GLM and Regression Utilities
Generating Bootstrap Estimation Distributions of HR Data
Best Subset Ridge Regression in Linear, Logistic, Poisson and
CoxPH Models
A Comprehensive R Package for Best Subset Selection
Robust Confidence Intervals for Standardized Regression
Coefficients
Estimators of Multiple-Site Dissimilarity Indices for the
Assessment of Beta Diversity
Detecting rare variants for quantitative traits using nuclear
families
Functions for Working with the Beta Probability Density
Distribution
Functions for Working with Two- And Four-Parameter Beta
Probability Distributions
Beta-Diversity Within a Metaweb of Species Interactions
Partitioning beta diversity into turnover and nestedness
components
Partitioning Beta Diversity into Turnover and Nestedness
Components
Distance decay of similarity among biological inventories in the face of taxonomic uncertainty
Functions to incorporate taxonomic uncertainty on multivariate
analyses of ecological data
Taxonomic Uncertainty on Multivariate Analyses of Ecological
Data
Estimation and simulation of the first-order Beta-t-EGARCH model
Estimation and simulation of first-order Beta-t-EGARCH models
Simulation, estimation and forecasting of Beta-Skew-t-EGARCH
models
Simulation, Estimation and Forecasting of Beta-Skew-t-EGARCH
Models
Bayesian Spectral Inference for Stationary Time Series
BFAST: Breaks For Additive Seasonal and Trend
Breaks For Additive Season and Trend (BFAST)
Plot Maps from Switzerland by Swiss Federal Statistical Office
Bayesian Framework for Computational Modelling
Bayesian Framework for Computational Modeling
Binary Generalized Extreme Value Additive Models
BoardGameGeek's Board Game Data Analysis Tools
Bayesian Estimation of Generalized Graded Unfolding Model
Parameters
Bayesian Estimation in Generalized Linear Models
Example BGM Files for the Atlantis Ecosystem Model
Gaussian Mixture Modeling algorithms. Including the belief-based
mixture modeling.
Gaussian Mixture Modeling Algorithms And The Belief-based
Mixture Modeling
Gaussian Mixture Modeling Algorithms and the Belief-Based
Mixture Modeling
Bayesian Group Sparse Multi-Task Regression
Bayesian Hierarchical Models for Basket Trials
Bayesian Hierarchical Poisson Models for Multiple Grouped
Outcomes with Clustering
Bayesian Hierarchical Regression on Clearance Rates in the
Presence of Lag and Tail Phases
Binary Classification Using Extensions of Discriminant Analysis
Basic image operations and image processing
Bias correction of the parameter estimates of the beta
regression model
Bibliometric and Co-Citation Analysis Tool
An R-Tool for Comprehensive Science Mapping Analysis
Create Different Types of Bibliometric Networks
Reading Mass Spectrometric Search Results
Bayesian Inference for the Birnbaum-Saunders Distribution
Maximal Biclique Enumeration in Bipartite Graphs
Reduction algorithm for the NPMLE for the distribution function of
bivariate interval-censored data
Efficient Estimation of Bid-Ask Spreads from Open, High, Low,
and Close Prices
Inferences for bi- and trifactorial trial designs
Flexibly Format Dates and Times to a Given Locale
Scalable Bayesian Disease Mapping Models for High-Dimensional
Data
Fast Linear Models for Objects from the 'bigmemory' Package
Optimized Kernel Regularized Least Squares
Interface with Google BigQuery with Shiny Compatibility
Generalized Ridge Regression (with special advantage for p >> n
cases)
Generalized Linear Models (GLM) for Large Data Sets
Big Survival Analysis Using Stochastic Gradient Descent
BLAS routines for native R matrices and big.matrix objects.
BLAS Routines for Native R Matrices and 'big.matrix' Objects
'BLAS' and 'LAPACK' Routines for Native R Matrices and
'big.matrix' Objects
A library of utilities for big.matrix objects of package
bigmemory.
Utilities for 'big.matrix' Objects from Package 'bigmemory'
Read, Manipulate and Explore Chess PGN Files
Read, Manipulate, Explore Chess PGN Files and R API to UCI Chess
Engines
Read, Write, Manipulate, Explore Chess PGN Files and R API to
UCI Chess Engines
Distances for Machine Learning and Statistics in the Context of
Big Data
Scalable Least-Angle Regression and Lasso
Big Lasso: Extending Lasso Model Fitting to Big Data in R
Extending Lasso Model Fitting to Big Data in R
Extending Lasso Model Fitting to Big Data
Physical and Physiological Ecosystem Properties from Eddy
Covariance Data
bounded memory linear and generalized linear models
Bounded Memory Linear and Generalized Linear Models
Making Optimal Matching Size-Scalable Using Optimal Calipers
Tuning Insensitive Graph Estimation and Regression
Manage massive matrices in R using C++, with UNIX support for shared memory
Manage massive matrices in R using C++, with support for shared
memory and memory-mapped files.
Manage massive matrices with shared memory and memory-mapped
files
Manage Massive Matrices with Shared Memory and Memory-Mapped
Files
A shared resource interface for Bigmemory Project packages
A Shared Resource Interface for Bigmemory Project Packages
Arbitrary-Precision Integer and Floating-Point Mathematics
PCA, Transpose and Multicore Functionality for 'big.matrix'
Objects
PCA, transpose and multicore functionality for big.matrix
objects
Big Random Forests: Classification and Regression Forests for
Large Data Sets
An Interface to Google's 'BigQuery' 'API'
Fast Generation of High-Dimensional Random Vectors
Big Splines (smoothing splines for large samples)
Statistical Tools for Filebacked Big Matrices
table-, tapply-, and split-like functionality for matrix and
big.matrix objects.
Table, Apply, and Split Functionality for Matrix and
'big.matrix' Objects
Nonparametric Analysis of Bivariate Gap Time with Competing
Risks
Sparse Estimation of Large Time Series Models
Download and Aggregate Data from Public Hire Bicycle Systems
Coclustering Adjusted Rand Index and Bikm1 Procedure for
Contingency and Binary Data-Sets
Co-Clustering Adjusted Rand Index and Bikm1 Procedure for
Contingency and Binary Data-Sets
bild: a package for BInary Longitudinal Data
Contains Data of Billboard Hot 100 Songs
Create Interactive Chart with the JavaScript 'Billboard' Library
Power for SNP analyses using silver standard cases
Estimates Mixture Models for Case-Control Data
Evaluation and experimental design for binomial group testing
Evaluation and Experimental Design for Binomial Group Testing
Identification and Estimation using Group Testing
Asymptotic simultaneous confdence intervals for many-to-one comparisons of proportions
Asymptotic simultaneous confidence intervals for many-to-one
comparisons of proportions
Fit and Predict a Gaussian Process Model with (Time-Series)
Binary Response
Flexible Marginalized Models for Binary Correlated Outcomes
Analyzes a Binary Variable During a Time Series
Multi-Class Discriminant Analysis using Binary Predictors
Methods for Analyzing Binned Income Data
Estimates Parameters of Functions Driving Binomial Random
Variables
Get Bing Ads Data via the 'Windsor.ai' API
Spectral Processing for High Resolution Flow Infusion Mass
Spectrometry
Nonparametric Estimation for Interval-Grouped Data
Binomial Confidence Intervals For Several Parameterizations
Binomial Confidence Intervals for Several Parameterizations
Confidence intervals and sample size determination for a
binomial proportion under simple random sampling and pooled
sampling
Confidence Intervals and Sample Size Determination for a
Binomial Proportion under Simple Random Sampling and Pooled
Sampling
Performing diagnostics on binomial regression models
'Taxonomic' Specification and Parsing Methods
Mixture Models for Binomial and Longitudinal Data
Binomial Random Forest Feature Selection
Generates binomial random numbers via the coupling from the past
algorithm
Efficient MCMC for Binomial Logit Models
Depth-Dependent Binocular Visual Fields Simulation
Cut Numeric Values Into Evenly Distributed Groups
Cut Numeric Values into Evenly Distributed Groups
Efficient Implementation of Binary Segmentation
Exact Binary Sequential Designs and Analysis
Bayesian Inference for Neyman-Scott Point Processes
Data Preprocessing, Binning for Classification and Regression
Predict environmental conditions from biological observations
Predict Environmental Conditions from Biological Observations
Sensitivity Analysis and Optimum Experiment Design for Microbial
Inactivation
Simulation of deterministic and stochastic biochemical reaction
networks using Petri Nets
Biological Analysis and Visualization of Weather Radar Data
Analyse Audio Recordings and Automatically Extract Animal
Vocalizations
Summarising Multi Well Plate Cellular Assay
Create and Manipulate BioCompute Objects
An R Shiny Application for Biological Dosimetry
An Interface for GenBank/GenPept Flat Files
Analyze Biogas Data and Predict Biogas Production
Process Biogas Data and Predict Biogas Production
Point Data Quality Assessment and Coordinate Conversion
Simulation of Dynamic Microbial Inactivation
Mathematical Modelling of (Dynamic) Microbial Inactivation
Bi-Objective k-Nearest Neighbors Imputation for Multilevel Data
Create Hyperlinks to Biological Databases and Resources
An interface package (beta) for the BIOM file format.
Functional Annotation and Biological Data Retrieval with R
Functions to Assist Design and Analysis of Agronomic Experiments
Ensemble platform for species distribution modeling
Ensemble Platform for Species Distribution Modeling
Visualization of Overlapping Results with Heatmap
Search and Download Papers from the bioRxiv Preprint Server
From BIOlogical Sequences to MultiDimensional Scaling
From Biological Sequences to Multidimensional Scaling
Distributional Data Analysis Techniques for Biosensor Data
A Toolbox for Manipulating Biological Sequences
Convert a Matrix of Raw Values into Nice and Tidy Data
Standard Processing Tools for Electromyogram Signals
Tools for Electromyogram Signals (EMG) Analysis
Biomarker Selection in Penalized Regression Models
Utility Functions, Datasets and Extended Examples for Survival
Analysis
Calculation of Freshwater Biotic Indices
Tools for Biometry and Applied Statistics in Agricultural
Science
Visualises bipartite networks and calculates some ecological indices.
Visualising bipartite networks and calculating some ecological indices.
Visualising bipartite networks and calculating some ecological
indices.
Visualising bipartite networks and calculating some (ecological)
indices.
Visualising Bipartite Networks and Calculating Some (Ecological)
Indices
Bayesian Individual Patient Data Meta-Analysis using 'JAGS'
Bootstrap on Classical Biplots and Clustering Disjoint Biplot
Ranking Nodes in Bipartite and Weighted Networks
Dealing with very large datasets using BIRCH
Methods to analyse ring re-encounter data
Methods to Analyse Ring Re-Encounter Data
The R Package for "The Basics of Item Response Theory Using R"
Tools and Palettes for Bivariate Thematic Mapping
Auxiliary functions for phenological data analysis
Estimating Cell Type Composition from Methylation Sequencing
Data
Tools to find bad commits with git bisect
Bayesian Isotonic Regression with Bernstein Polynomials
Approximate Bayesian Inference via Sparse Grid Quadrature
Evaluation (BISQuE) for Hierarchical Models
Cumulative History Analysis for Bistable Perception Time Series
Classes and Methods for Fast Memory-Efficient Boolean Selections
A S3 class for vectors of 64bit integers
A S3 Class for Vectors of 64bit Integers
Bayesian Integrative Models of Trait Evolution
Bayesian Inference of Transmission Routes Using Genome Sequences
Quantize Floating-Point Numbers for Improved Compressibility
Sample size calculations for bivariate longitudinal data
Bivariate Poisson Models Using The EM Algorithm
Bivariate Residual Plots with Simulation Polygons
Conduct univariate and bivariate wavelet analyses
Conduct Univariate and Bivariate Wavelet Analyses
Compute the Biweight Mean Vector and Covariance & Correlation
Matrice
Functions to compute the biweight mean vector and covariance &
correlation matrices
Functions to handle business days calculations
Business Days Calculations and Utilities
Bivariate Zero-Inflated Count Models Using Copulas
An API Wrapper for the Bureau of Justice Statistics (BJS)
Parallel Chain Tools for Bayesian Kernel Machine Regression
Black Box Optimization and Exploration of Parameter Space
Read and Write FWF Files in the Blaise Format
Read and Write FWF Files in the 'Blaise' Format
Bayesian Inference with Laplace Approximations and P-Splines
Native R Implementation of an Efficient BLAST-Like Algorithm
A New Link Function that Blends Two Specified Link Functions
Analyze biotic homogenization of landscapes
Bipartite Longitudinal Influence Network (BLIN) Estimation
Record Linkage for Empirically Motivated Priors
Bayesian Functional Linear Regression with Sparse Step Functions
Data Exploration with Multiple Machine Learning Algorithms
Fitting block ERGM given the block structure on social networks
Binomial linear and linear-expit regression
Data Files and Functions Accompanying the Book "Bayesian Data
Analysis in Ecology using R, BUGS and Stan"
A Simple S3 Class for Representing Vectors of Binary Data
('BLOBS')
Spatial and Environmental Blocking for K-Fold Cross-Validation
Block Forests: Random Forests for Blocks of Clinical and Omics
Covariate Data
Block Design for Response-Adaptive Randomization
Block, randomly assign, and diagnose potential problems between units in randomized experiments
Block, assign, and diagnose potential interference in randomized experiments
Block, assign, and diagnose potential interference in randomized
experiments
Block, Assign, and Diagnose Potential Interference in Randomized
Experiments
Co-Clustering package for Binary, contingency and continuous
data-sets.
Co-Clustering package for Binary, Contingency and Continuous
data-sets.
Co-Clustering package for binary, contingency, continuous and
categorical data-sets.
Coclustering package for binary, contingency, continuous and
categorical data-sets
Coclustering Package for Binary, Categorical, Contingency and
Continuous Data-Sets
Co-clustering Package for Binary, Categorical, Contingency and
Continuous Data-Sets
Co-Clustering Package for Binary, Categorical, Contingency and
Continuous Data-Sets
Change Point Detection for Multiple Aligned Independent Time
Series
Create Blocks or Strata which are Similar Within
Select Optimal Block-Length to Bootstrap Dependent Data (Block
Bootstrap)
Select an Optimal Block-Length to Bootstrap Dependent Data
(Block Bootstrap)
blockmatrix: Tools to solve algebraic systems with partitioned
matrices
An R package for Generalized and classical blockmodeling of valued networks
An R package for Generalized and classical blockmodeling of
valued networks
An R Package for Generalized and Classical Blockmodeling of
Valued Networks
Generalized and Classical Blockmodeling of Valued Networks
Latent and Stochastic Block Model Estimation by a 'V-EM'
Algorithm
Randomization for block random clinical trials
Randomization for Block Random Clinical Trials
Nested block designs for unstructured treatments
Nested Block Designs for Unstructured Treatments
Nested and Crossed Block Designs for Unstructured Treatment Sets
Nested and Crossed Block Designs for Unstructured and Factorial
Treatment Sets
Nested and Crossed Block Designs for Factorial, Fractional
Factorial and Unstructured Treatment Sets
Nested and Crossed Block Designs for Factorial and Unstructured
Treatment Sets
Estimate and Visualize Voting Blocs' Partisan Contributions
Create Blogs and Websites with R Markdown
Tools for Developing Binary Logistic Regression Models
Constrained optimization via stochastic gradient descent.
Constrained Optimization Via Stochastic Gradient Descent
Dose Escalation Design in Phase I Oncology Trial Using Bayesian
Logistic Regression Modeling
Request Data From The U.S. Bureau of Labor Statistics API
Request Data from the U.S. Bureau of Labor Statistics API
Make Requests from the Bureau of Labor Statistics API
An API Wrapper for the Bureau of Labor Statistics (BLS)
Bayesian Model Averaging for Basket Trials
Bayesian Multivariate Analysis of Summary Statistics
Benchmark dose analysis for dose-response data
Mediation analysis with missing data using bootstrap
Mediation Analysis with Missing Data Using Bootstrap
Mediation Analysis with Missing Data and Non-Normal Data
A Package for Bayesian Meta-Analysis and Meta-Regression
Bayesian Multidimensional Generalized Graded Unfolding Model
Bayesian Estimation for Finite Mixture of Distributions
Bundle Methods for Regularized Risk Minimization Package
Bayesian Multilevel Single Case Models using 'Stan'
Bayesian Modeling of Spatio-Temporal Data with R
Bayesian Network-Based Clustering of Multi-Omics Data
Learning Bayesian Network Classifiers from Data
Learning Discrete Bayesian Network Classifiers from Data
Bounding Omitted Variable Bias Using Auxiliary Data
Bayesian network structure learning, parameter learning and
inference
Bayesian Network Structure Learning, Parameter Learning and
Inference
Bayesian Network Meta-Analysis using 'JAGS'
An Implementation of Sensitivity Analysis in Bayesian Networks
Bagged k-Nearest Neighbors Survival Prediction
Bayesian Estimation for Normal Heteroscedastic Nonlinear
Regression Models
Simulate Genotypes from the BN-PSD Admixture Model
Spatial Implementation of Bayesian Networks and Mapping
Bayesian Network Structure Learning from Data with Missing
Values
Interactive Visualization of Bayesian Networks
Bayesian Networks Interactive Visualization and Explainable
Artificial Intelligence
Bayesian Output Analysis Program for MCMC
Bayesian Output Analysis Program (BOA) for MCMC
A Clustering Method Based on Boosting on Single Attributes
Profiling of Peripheral Blood Mononuclear Cells using CyTOF
Profilling of Peripheral Blood Mononuclear Cells using CyTOF
Percent Body Fat Values Using Anthropometric Prediction
Equations
Interface to the boilerpipe Java library by Christian
Kohlschutter (http://code.google.com/p/boilerpipe/)
Interface to the Boilerpipe Java Library
Model Consistent Lasso Estimation Through the Bootstrap
Download Australian Bureau of Meteorology Water Data
Fetch Australian Government Bureau of Meteorology Data
Australian Government Bureau of Meteorology Data from R
Australian Government Bureau of Meteorology (BOM) Data from R
Australian Government Bureau of Meteorology ('BOM') Data Client
Methods for Fixed-Income Valuation, Risk and Return
Authoring Books and Technical Documents with R Markdown
Generate Varied Books and Documents with R 'bookdown' Package
Generate Varied Types of Books and Documents with R 'bookdown'
Package
Generate Assorted Books and Documents with R 'bookdown' Package
Debugging Tools to Inspect the Intermediate Steps of a Call
Boosting Methods for Real and Simulated Data
Optimized GWAS cohort subset selection for resequencing studies
Boosted Multivariate Trees for Longitudinal Data
A modular framework to bag or boost any estimation procedure.
Bootstrap Functions (originally by Angelo Canty for S)
Bootstrap Functions (Originally by Angelo Canty for S)
A Bootstrap-Based Heterogeneity Test for Meta-Analysis
Bootstrapping the Autoregressive Distributed Lags Tests for
Cointegration
Bootstrapping the ARDL Tests for Cointegration
Combine Parameter Estimates via Parametric Bootstrap
Bootstrap Confidence Intervals on Effect Sizes
Bootstrap Inference for Multiple Imputation
Bootstrapped confidence intervals for (negative) likelihood
ratio tests
Bootstrapped Confidence Intervals for (Negative) Likelihood
Ratio Tests
Bootstrap Hyperparameter Selection for PLS Models and Extensions
Bootstrapped Response and Correlation Functions
Fast, Exact Bootstrap Principal Component Analysis for High
Dimensional Data
Robust Performance Hypothesis Testing with the Sharpe Ratio
Bootstrapping Estimates of Clustering Stability
Simulation and Comparison of Dissolution Profiles
Use multiple feature selection algorithms to derive robust
feature sets for two class classification problems.
Use multiple feature selection algorithms to derive robust
feature sets for two or multiclass classification problems.
Bootstrap Methods for Various Network Estimation Routines
A bootstrap test for the probability of ruin in the classical
risk process
A Bootstrap Test for the Probability of Ruin in the Classical
Risk Process
Bootstrap Subsamplings of Sparse Partial Least Squares -
Discriminant Analysis for Classification and Signature
Identification
Functions for the Book "An Introduction to the Bootstrap"
Bootstrap Algorithms for Finite Population Inference
Bootstrap Tolerance Levels for Credit Scoring Validation
Statistics
Transforming Behavioral Observation Records into Data Matrices
Bayesian Ordination and Regression AnaLysis
Estimate Causal Effects with Borrowing Between Data Sources
Boosted One-Step Statistics: Fast and accurate approximations
for GLM, GEE and Mixed models for use in GWAS
Convert Binary Species Range Maps into Continuous Surfaces Based
on Distance to Range Edge
Analytic Solutions for (ground-water) Boussinesq Equation
Analytic Solutions for (Ground-Water) Boussinesq Equation
Outlier Detection and Influence Diagnostics for Meta-Analysis
Write Reusable, Composable and Modular R Code
Response Transformations for Random Effect and Variance
Component Models
Box-Cox-Type Transformations for Linear and Logistic Models with
Random Effects
Downloads Box Office Information for Given Dates (How Much Each
Movie Earned in Theaters)
Downloads Box Office Information for Given Dates
Double Box Plot for Two-Axes Correlation
Blood Pressure Device Accuracy Evaluation: Statistical
Considerations
Nonparametric Bounds for the Average Causal Effect Due to Balke
and Pearl and Extensions
Biplot of Multivariate Data Based on Principal Components
Analysis
Biplot of Multivariate Data Based on Principal Components Analysis
Beta Product Confidence Procedure for Right Censored Data
Bayesian Paired Comparison Analysis with Stan
Bayesian Model Selection Approach for Parsimonious Gaussian
Mixture Models
Back Projected Kernel Density Estimation
Bayesian Projected Normal Regression Models for Circular Data
Computations Around Bayesian Predictive Power
Bayesian Quantile Regression for Ordinal Models
Bootstrapped Robustness Assessment for Qualitative Comparative
Analysis
Calculate the Revealed Aggregator of Probability Predictions
Visualize Combined Action Response Surfaces and Report BRAID
Analyses
Fitting Dose Response with the BRAID Combined Action Model
Region-Level Connectivity Network Construction via Kernel
Canonical Correlation Analysis
Helper functions to misc3d and rgl packages for brain imaging
Helper Functions to 'misc3d' and 'rgl' Packages for Brain
Imaging
Basic wavelet analysis of multivariate time series with a visualisation
and parametrisation using graph theory.
Basic wavelet analysis of multivariate time series with a
visualisation and parametrisation using graph theory.
Bayesian Screening and Variable Selection
Brazilian Maps from Different Geographic Levels
Analyze Big Files Without Loading Them in Memory
Model Agnostic Explainers for Individual Predictions
Species richness estimation and modelling
Species Richness Estimation and Modeling
Multiple Change-Point Detection and Segmentation
breakfast: Computationally Efficient Multiple Change-Point
Detection and Estimation with a Broad Range of Methods
Methods for Fast Multiple Change-Point Detection and Estimation
An R Package for Multiple Break-Point Detection via the
Cross-Entropy Method
Multiple Break-Point Detection via the Cross-Entropy Method
Core Functions to Read and Fit 13c Time Series from Breath Tests
Stan-Based Fit to Gastric Emptying Curves
Templating Framework for Report Generation
Extracting Usable Data from the Grad Cafe Results Search
Bias reduction in binomial-response GLMs.
Bias reduction in binomial-response generalized linear models.
Bias Reduction in Binomial-Response Generalized Linear Models
Bias Reduction in Generalized Linear Models
Package for Brik and Fabrik Algorithms to Initialise Kmeans
Package for Brik, Fabrik and Fdebrik Algorithms to Initialise
Kmeans
Brier score decomposition of probabilistic forecasts for binary
events
An Implementation of the Bridge Distribution with Logit-Link as
in Wang and Louis (2003)
Bridge Hand Generator with Criteria Selector
Genome-Wide RNA Degradation Analysis Using BRIC-Seq Data
Bridge Sampling for Marginal Likelihoods and Bayes Factors
A Tree and Forest Tool for Classification and Regression
Bias Reduction with Missing Binary Response
Bayesian Marginal Effects for 'brms' Models
brnn (Bayesian regularization for feed-forward neural networks)
Bayesian Regularization for Feed-Forward Neural Networks
Broken Stick Model for Irregular Longitudinal Data
Browse Over Longitudinal Data Graphically and Analytically in R
Convert Statistical Analysis Objects Into Tidy Data Frames
Convert Statistical Analysis Objects into Tidy Data Frames
Convert Statistical Analysis Objects into Tidy Tibbles
Convert Statistical Objects into Tidy Tibbles
Grouped Statistical Analyses in a Tidy Way
Enhancements for 'broom' and 'easystats' Package Families
A Compression Format Optimized for the Web
Bayesian Inference on the Ratio of Two Poisson Rates
Broadly Useful Convenient and Efficient R Functions
High-Level Modeling Functions with 'torch'
Package for the Birnbaum-Saunders distribution
A 'Bootstrap 4' Version of 'shinydashboard'
Create HTML Content with Bootstrap 5 Classes and Layouts
Bayesian State-Space Models for Animal Movement
Bayesian Spectral Analysis Models using Gaussian Process Priors
Bayesian parametric and semi-parametric analyses for
semi-competing risks data
Nonparametric Smoothing of the Hazard Function
Custom 'Bootstrap' 'Sass' Themes for 'shiny' and 'rmarkdown'
Build Decision Trees with Optimal Multivariate Splits
Bayesian Nonparametric Spectral Density Estimation Using
B-Spline Priors
Adds Functionality to the R Markdown + Shiny Bootstrap Framework
bspmma: Bayesian Semiparametric Models for Meta-Analysis
Bayesian Semiparametric Models for Meta-Analysis
Bayesian Inference of State Space Models
Bayesian Inference of Non-Linear and Non-Gaussian State Space
Models
Bayesian Inference of Non-Gaussian State Space Models
Birnbaum-Saunders Model Based on Skew-Normal Distribution
Submitter and Monitor of the 'LSF Cluster'
Bayesian Estimation of Structural Vector Autoregressive Models
Beyond the Border - Kernel Density Estimation for Urban
Geography
Temporal Exponential Random Graph Models by Bootstrapped
Pseudolikelihood
Estimates univariate function via Bayesian trend filtering
Estimates Univariate Function via Bayesian Trend Filtering
Beautiful Bubbles for 'shiny' and 'rmarkdown' Backgrounds
Bucky's Archive for Data Analysis in the Social Sciences
Stepwise Elimination and Term Reordering for Mixed-Effects
Regression
Organize & Run Build Scripts Comfortably
Buckley-James Regression for Survival Data with High-Dimensional
Covariates
Interactive Shiny App for Bulk Sequencing Data
Automatic Groove Identification via Bayesian Changepoint
Detection
Bullish Trading Strategies Through Graphs
Tools for Modeling Bumblebee Colony Growth and Decline
Quantify Disease Transmission Within and Between Population
Groups
Analyze Bunching in a Kink or Notch Setting
Serialize Model Objects with a Consistent Interface
Markov model for bursty behavior in streams
Markov Model for Bursty Behavior in Streams
Unit testing, profiling and benchmarking for R
Bayesian Analysis of a Vector Autoregressive Model with
Stochastic Volatility and Time-Varying Parameters
Bayesian Inference of Vector Autoregressive Models
Bayesian Inference of Vector Autoregressive and Error Correction
Models
A Simple alternative to proportional Venn diagrams
The Stark-Parker algorithm for bounded-variable least squares
Solvers for boundary value problems of ordinary differential
equations
Solvers for Boundary Value Problems of Differential Equations
Dynamic Body Weight Models for Children and Adults
Backward Procedure for Change-Point Detection
Describe Image Patterns in Natural Structures
Tools for Case 1 Best-Worst Scaling (MaxDiff) Designs
Nonparametric conditional survival function for successive
survival times
Get, Download, and Read City Bike Data from Norway
Statistics About Bytes Contained in a File as a Circle Plot
Bivariate Zero-Inflated Negative Binomial Model Estimator
Extended Inference for Lasso and Elastic-Net Regularized Cox and
Generalized Linear Models
Additional variable selection, model validation and parameter
tuning functions for glmnet models
Download and Prepare C14 Dates from Different Source Databases
Methods for Detecting Safety Signals in Clinical Trials Using
Body-Systems (System Organ Classes)
Compare Two Classifications or Clustering Solutions of Varying
Structure
Infering large-scale gene networks with C3NET
Inferring Large-Scale Gene Networks with C3NET
Conditional Akaike information criterion for lme4
Conditional Akaike Information Criterion for 'lme4'
Conditional Akaike Information Criterion for 'lme4' and 'nlme'
Automated C Code Generation for Use with the "deSolve" and
"bvpSolve"" Packages
Automated C Code Generation for Use with the 'deSolve' and
'bvpSolve' Packages
Automated C Code Generation for 'deSolve', 'bvpSolve' and
'Sundials'
Automated C Code Generation for 'deSolve', 'bvpSolve'
Efficient and Customized Preconditioned Conjugate Gradient
Method for Solving System of Linear Equations
Constructs a Correlated Pseudo-Marginal Sampler
Obtain and Visualize Regulome-Gene Expression Correlations in
Cancer
Covariate-adjusted Skewed Functional Model (cSFM)
Simple, Multiple and Joint Correspondence Analysis
A Tcl/Tk GUI for the functions in the ca package
Mixed Computerized Adaptive Multistage Testing
Processing and Classification of Protein Mass Spectra (SELDI) Data
Processing & Classification of Protein Mass Spectra (SELDI) Data
Continuous Biomarker Evaluation with Adjustment of Covariates
Automatic Calibration by Evolutionary Multi Objective Algorithm
Government of Canada Vehicle Recalls Database API Wrapper
CRISPR AnalyzeR for Pooled CRISPR Screens
Miscellaneous functions created while developing caMassClass package
Miscellaneous tools created while developing caMassClass package
Tools: moving window statistics, GIF, Base64, ROC AUC, etc.
Tools: moving window statistics, GIF, Base64, ROC AUC, etc
Tools: Moving Window Statistics, GIF, Base64, ROC AUC, etc
Miscellaneous tools: I/O, moving window statistics, etc.
Project Specific Workspace Organization Templates
Bootstrap Confidence Regions for Correspondence Analysis.
Bootstrap Confidence Regions for Simple and Multiple
Correspondence Analysis
Computes classification accuracy and consistency under Item
Response Theory
Classification accuracy and consistency under Item Response
Theory
Classification Accuracy and Consistency under Item Response
Theory
Conjunctive Analysis of Case Configurations
Tools for caching and distributing statistical analyses
Simulation of Plasma Caffeine Concentrations by Using Population
Pharmacokinetic Model
Cairo-based cross-platform antialiased graphics device driver.
Calculations for All Common Subsequences
Simple Wrapper for Computationally Expensive Functions
Calculates the Wavelet-Based Organization Index
High Dimensional Numerical and Symbolic Calculus
Ready to Print Monthly and Yearly Calendars Made with 'ggplot2'
'calendR' Fork with Additional Features (Backwards Compatible)
Create, Read, Write, and Work with 'iCalander' Files, Calendars
and Scheduling Data
Statistical models and tools for assay calibration
Automated Parameter Estimation for Complex (Ecological) Models
Calibration of Scatterplot and Biplot Axes
Calibration for Computer Experiments with Binary Responses
Bayesian calibration of complex computer codes
Bayesian Calibration of Complex Computer Codes
Assesses the Quality of Estimates Made by Complex Sample Designs
Calibration and Verification of Gridded Model Outputs
CalMaTe - Improved allele-specific copy number of SNP arrays for
downstream segmentation
Improved Allele-Specific Copy Number of SNP Microarrays for
Downstream Segmentation
Post-calibration of allele-specific copy-number estimates
(ASCNs)
Datasets from "Microeconometrics: Methods and Applications" by
Cameron and Trivedi
Connect to Campaign Manager via the 'Windsor.ai' API
Generic PK/PD Simulation Platform CAMPSIS
Camera Trap Photograph Management and Preparation of Occupancy
Analyses
Camera Trap Data Management and Preparation of Occupancy and
Spatial Capture-Recapture Analyses
API Wrapper for the Canadian COVID-19 Tracker
Maps of the Political and Administrative Divisions of Canada
Categorical Analysis of Neo- And Paleo-Endemism
Canadian Census Data and Geography from the 'CensusMapper' API
Access, Retrieve, and Work with Canadian Census Data and
Geography
Estimation of temporal ordering of cancer abnormalities
Estimation of Temporal Ordering of Cancer Abnormalities
Visualizing Generalized Canonical Discriminant and Canonical
Correlation Analysis
Chemical Composition of Differential Protein Expression
Compositional Analysis of Differentially Expressed Proteins in
Cancer
Chemical Metrics of Differentially Expressed Proteins
Accessing Statistics Canada Data Table and Vectors
R graphics device targeting the HTML canvas element.
Visualization Package for CanvasXpress in R
Covariate Assisted Principal (CAP) Regression for Covariance
Matrix Outcomes
Combined analysis of pleiotropy and epistasis
Combined Analysis of Pleiotropy and Epistasis
Combined Analysis of Pleiotropy and Epistasis for Diversity
Outbred Mice
Comparative Analyses of Phylogenetics and Evolution in R
Capital Budgeting Analysis, Annuity Loan Calculations and
Amortization Schedules
Compute and Visualize CAPL-2 Scores and Interpretations
Covariate Adjusted Precision Matrix Estimation
Numbers Figures and Creates Simple Captions
Capushe, data-driven slope estimation and dimension jump
CAlibrating Penalities Using Slope HEuristics
Estimates population size from non-invasive sampling
Companion to Applied Regression Data Sets
Correlation-Adjusted Regression Survival (CARS) Scores
Covariate-Adaptive Randomization for Clinical Trials
Estimation of the number of fatalities from carcass searches
Estimation of the Number of Fatalities from Carcass Searches
Cardiovascular and Autonomic Research Design
Identification of cardinal dates in ecological time series
Identification of Cardinal Dates in Ecological Time Series
Cardiovascular Safety Exposure-Response Modeling in Early-Phase
Clinical Studies
CAR Estimation, Variable Selection, and Regression
High-Dimensional Regression and CAR Score Variable Selection
Procedures for Computing Indices of Careless Responding
Time Series Forecasting Using Caret Infrastructure
Conformal Time Series Forecasting Using State of Art Machine
Learning Algorithms
Classification and Regression Training LSF Style
Classification and Regression Training in Parallel Using NetworkSpaces
Continuous-Time Fractionally Integrated ARMA Process for
Irregularly Spaced Long-Memory Time Series Data
Download and Run Cargo, the Rust Package Manager
Estimation of caribou abundance based on large scale
aggregations monitored by radio telemetry
Estimation of Caribou Abundance Based on Radio Telemetry Data
A Collection of General Purpose Functions for R
A Collection of Database, Data Structure, Visualization and
Utility Functions for R
A Collection of Database, Data Structure, Visualization, and
Utility Functions for R
Build Common Tables of Summary Statistics for Reports
Tools for Understanding Highway Performance
Censored Autoregressive Model with Exogenous Covariates
Séries temporelles avec R - Méthodes et cas
Casualty Actuarial Society Individual Claim Simulator
Identify similar cases for qualitative case studies.
Identify Similar Cases for Qualitative Case Studies
Fitting Flexible Smooth-in-Time Hazards and Risk Functions via
Logistic and Multinomial Regression
Metodos De Estimacion Con Disenio Probabilistico y Estratificado
en Encuesta CASEN (Estimation Methods with Probabilistic
Stratified Sampling in CASEN Survey)
Clustered and sparse regression (CaSpaR)
Finds Missing Links and Metric Confidence Intervals in
Ecological Bipartite Networks
Compute Scagnostics on Pairs of Numeric Variables in a Data Set
Efficient Comparative Phylogenetics on Large Trees
Analysis of categorical-variable datasets with missing values
Analysis and Imputation of Categorical-Variable Datasets with
Missing Values
Computerized Adaptive Testing and Decision Trees
Mapping of a Categorical Variable in a Panel Dataset
Unify a Categorical Variable in a Panel Dataset
Handling an Inconsistent Coded Categorical Variable in a Panel
Dataset
Handling an Inconsistently Coded Categorical Variable in a Panel
Dataset
An R Package for Simulating IRT-Based Computerized Adaptive
Tests
Simulate IRT-Based Computerized Adaptive Tests
Procedures to generate IRT adaptive tests (CAT)
Procedures to Generate Patterns under Computerized Adaptive
Testing
Generation of IRT Response Patterns under Computerized Adaptive
Testing
Encode Categorical Variables with Split Information from CART
Computerized Adaptive Testing for Survey Research
Analysis of Check-All-that-Apply (CATA) Data
Access the 'Spark Catalog' API via 'sparklyr'
Covariate-Adjusted Tensor Classification in High-Dimensions
Taking the Pain Out of Catching and Handling Conditions
Test for and Identify Categorical or Continuous Values
Test, Identify, Select and Mutate Categorical or Continuous
Values
Categorical Data Analysis Program Package
High Dimensional Factor Analysis and Confounder Adjusted Testing
and Estimation
Community Assembly by Traits: Individuals and beyond
Community Assembly by Traits: Individuals and Beyond
Formal Psychological Models of Categorization and Learning
Case-control And Tdt Meta-Analysis Package
Case-Control and TDT Meta-Analysis Package
Heatmap for Categorical Data using 'plotly'
catnet: Categorical Bayesian Network Inference
Create Catseye Plots Illustrating the Normal Distribution of the
Means
Binary and Categorical Image Similarity Index
Special models for categorical variables
Robust Principal Component Analysis Using the Cauchy
Distribution
Accelerated Bayesian Analytics with DAGs
Nonparametric and Cox-Based Estimation of ATE in Competing Risks
Tools for Causal Discovery on Observational Data
Causal Learning of Mixed Graphical Models
Optimal Transport Weights for Causal Inference
Causal Effect for Population Attributable Fractions (PAF)
Example Data Sets for Causal Inference Textbooks
Tools for Estimating Causal Dose Response Functions
Estimating Causal Dose Response Functions
Deriving Expressions of Joint Interventional Distributions in
Causal Models
Deriving Expressions of Joint Interventional Distributions and
Transport Formulas in Causal Models
An Interface to Specify Causal Graphs and Compute Bounds on
Causal Effects
Selection Bias Approach to Sensitivity Analysis for Causal
Effects
Causal Inference Based on Weighting Estimators
Estimation Methods for Causal Inference Based on Inverse
Probability Weighting
Causal Inference Based on Inverse Probability Weighting, Doubly
Robust Estimation, and Double Machine Learning
Clustering for Business Analytics - Miscellaneous functions.
Contextual Bayesian Anomaly Detection in R
Continuous Analog of a Binomial Distribution
Browse and Query Clinical and Genomic Data from cBioPortal
Clustering of Multivariate Binary Data with Dimension Reduction
via L1-Regularized Likelihood Maximization
Causal Discovery under a Confounder Blanket
Simulation, Estimation and Segmentation of Composite Based
Structural Equation Models
Statistics Netherlands (CBS) Open Data API Client
Removes the Cell-Cycle Effect from Single-Cell RNA-Sequencing
Data
(Robust) canonical correlation analysis via projection pursuit
(Robust) Canonical Correlation Analysis via Projection Pursuit
Concordance Correlation Coefficient for Repeated (and
Non-Repeated) Measures
Combined Cluster and Discriminant Analysis
Distribution-Free Single-Cell Differential Expression Analysis
CCDr Algorithm for Learning Sparse Gaussian Bayesian Networks
Combinatorially Complex Equilibrium Model Selection
Cox Model for Case-Cohort Data with Stratified
Subcohort-Selection
Transforming and Harmonizing CCHS Variables
Cross-Covariance Isolate Detect: a New Change-Point Method for
Estimating Dynamic Functional Connectivity
Convex Clustering Methods and Clustering Indexes
Consensus Clustering for Different Sample Coverage Data
Implementation of Case-Control Optimal Matching
Estimation of Mean Costs in Censored Data
Correct and Cluster Response Style Biased Data
Tools for the Continuous Convolution Trick in Nonparametric
Estimation
Coupled dipole approximation in electromagnetic scattering
Coupled dipole approximation of light scattering by clusters of
nanoparticles
Coupled-Dipole Approximation for Electromagnetic Scattering by
Three-Dimensional Clusters of Sub-Wavelength Particles
Wrappers for 'tidyr::gather()' and 'tidyr::spread()'
Cognitive Diagnostic Computerized Adaptive Testing
Retrieve U.S. Flu Season Data from the CDC FluView Portal
Retrieve 'U.S'. Flu Season Data from the 'CDC' 'FluView' Portal
Retrieve Flu Season Data from the United States Centers for
Disease Control and Prevention ('CDC') 'FluView' Portal
Conditional Distance Correlation and Its Related Feature
Screening Method
Conditional Distance Correlation Based Feature Screening and
Conditional Independence Inference
Download Data from the Catchment Data Explorer Website
Interface to the California Data Exchange Center
Quantile Regression for Random Variables on the Unit Interval
Tools to Download and Work with USDA Cropscape Data
Cause-Deleted Life Expectancy Improvement Procedure
Useful Tools for Cognitive Diagnosis Modeling
Constrained Dual Scaling for Detecting Response Styles
Benchmark for the CEC 2005 Special Session on Real-Parameter
Optimization
Benchmark functions for the Special Session and Competition on
Real-Parameter Single Objective Optimization at CEC-2013
R Interface for the C Implementation of CEC Benchmark Functions
Collection of common astronomical conversion routines.
Collection of common astronomical conversion routines
Collection of Common Astronomical Conversion Routines and
Functions
Finds RNASeq Source Tissues Using In Situ Hybridisation Data
Functions to fit cell volume distributions and thereby estimate cell growth rates and division times
Functions to fit cell volume distributions and thereby estimate
cell growth rates and division times
Functions to Fit Cell Volume Distributions and Thereby Estimate
Cell Growth Rates and Division Times
Cell Type Pipes for Single-Cell RNA Sequencing Data
Translate Spreadsheet Cell Ranges to Rows and Columns
Retrieve Affymetrix microarray measurements and metadata from Celsius
CEM: Software for Coarsened Exact Matching
Estimation of the Time-Dependent ROC Curve and AUC for Censored
Survival Data
Linear Regression with a Randomly Censored Covariate
Base de Datos de Facil Acceso del Censo 2017 de Chile (2017
Chilean Census Easy Access Database)
Changes United States Census Geographic Code into Name of
Location
Retrieve Data from the U.S. Census Bureau APIs
Access the U.S. Census Bureau's Geocoding A.P.I. System
Show the Strength of Relationships Between Centre and Peripheral
Items
Non-Trivial Balance of Centrifuge Rotors
Context Driven Exploratory Projection Pursuit
Covariance Estimation Regularized by Nuclear Norm Penalties
Access the Canadian Election Study Datasets
Ceteris Paribus Plots (What-If Plots) for a Single Observation
Analysis of configuration frequencies (CFA)
Functions to Access College Football Play by Play Data
Access College Football Play by Play Data
Counterfactual Decomposition: MC Integration of the G-Formula
Canadian Forest Fire Danger Rating System
Generate Citation File Format ('cff') Metadata for R Packages
Identification of Counterfactual Queries in Causal Models
Cystic Fibrosis Survival Prediction Model Based on Stanojevic
Model
Compare Groups, Analytically and Graphically
Calculate AUC-type measure when gold standard is continuous and
the corresponding optimal linear combination of variables with
respect to it.
Constrained Groupwise Additive Index Models
R6 Based Utilities for 3D Meshes using 'CGAL'
R-Based API for accessing the MSKCC Cancer Genomics Data Server
(CGDS).
R-Based API for Accessing the MSKCC Cancer Genomics Data Server
(CGDS)
Functions to analyse microarray comparative genome hybridisation
data using the Smith-Waterman algorithm
Microarray CGH analysis using the Smith-Waterman algorithm
Detecting hot spot on CGH array data with fused lasso regression.
Detecting hot spot on CGH array data with fused lasso
regression.
Array CGH Data Analysis and Visualization
Segmentation methods for array CGH analysis
Segmentation Methods for Array CGH Analysis
L1-Penalized Censored Gaussian Graphical Models
Conditional Graphical LASSO for Gaussian Graphical Models with
Censored and Missing Values
Fits Conditional Generalized Linear Models
Clean and Analyze Continuous Glucose Monitor Data
Analyzing Glucose and Glucose Variability
Continuous Time Generalized Rapid Response CUSUM
Automatic Colors for Multi-Dimensional Data
Change Metrics for Species Geographic Ranges
Nonparametric Change Detection in Multivariate Linear
Relationships
Contains funcions that run various single and multiple
changepoint methods
Geometrically Inspired Multivariate Changepoint Detection
Package to Calculate the Influence of the Data on a Changepoint
Segmentation
Changepoint Analysis for Multivariate Time Series
Methods for Nonparametric Changepoint Detection
Change Point Tests for Joint Distributions and Copulas
A Collection of Change-Point Detection Methods
Change-Point Estimation for Expensive and High-Dimensional
Models
Change-Points Detections for Changes in Variance
Loglikelihood Adjustments for Econometric Models
Converts listwise icd9 data into comorbidity count and Charlson
Index
Simplified Language for Plots and Charts
Checks if a Number is Valid Using the Luhn Algorithm
Check the Basic Validity of a (Function) Argument
Check-Fields and Check-Boxes for 'rmarkdown'
Install Packages from Snapshots on the Checkpoint Server for
Reproducibility
Check Object Classes, Values, Names and Dimensions
Check the Properties of Common R Objects
Analysis and visualisation of ecological communities
Analysis and Visualisation of Ecological Communities
Interactively Explore the Support of Local Explanations with the
Radial Tour
Tools for Intuitive and Flexible Statistical Analysis Workflows
Tools for Working with Data During Statistical Analysis
Calibration functions for analytical chemistry
Calibration Functions for Analytical Chemistry
A Cheminformatics Modeling Laboratory for Fitting and Assessing
Machine Learning Models
Analysing Chemodiversity of Phytochemical Data
Multivariate Statistical Analysis in Chemometrics
A tool for the design of synthetic experiments in machine
olfaction.
Multiple testing methods for exploratory research
Multiple Testing Methods for Exploratory Research
Read, Write, Create and Explore Chess Games
Functions to Extract, Clean and Analyse Online Chess Game Data
Change-in-Estimate Approach to Assess Confounding Effects
Chi-Squared and Tau Index Partitions for Three-Way Contingency
Tables
Partitioning Chi-Squared and Tau Index for Three-Way Contingency
Tables
'Compressive' Hierarchical Kernel Clustering Toolbox
Calculation of standard deviation scores adduced from different
growth standards
Data and Methods Around Reference Values in Pediatrics
Mapas de las Divisiones Politicas y Administrativas de Chile
(Maps of the Political and Administrative Divisions of Chile)
Statistical methods for phenology analysis in temperate fruit
trees
Statistical Methods for Phenology Analysis in Temperate Fruit
Trees
Miscellaneous Tools for Chinese Text Mining and More
Toolkit of helper functions to pre-process amplification data
Toolkit of Helper Functions to Pre-Process Amplification Data
A Post Hoc Analysis for Pearson's Chi-Squared Test for Count
Data
Chi-Square and G-Square Test of Independence and Measures of
Categorical Association
Chi-Square and G-Square Test of Independence, Residual Analysis,
and Measures of Categorical Association
Convert Antipsychotic Doses to Chlorpromazine Equivalents
Estimation and Hypothesis Testing for Threshold Regression
Amend, Augment and Aid Analysis of John Snow's Cholera Data
Amend, Augment and Aid Analysis of John Snow's Cholera Map
Permutation Test for Some Positive and Many Zero Responses
Estimation in respondent driven samples.
Functions to simplify the creation of choropleths (thematic
maps) in R.
Simplify the creation of choropleth maps in R.
Simplify the Creation of Choropleth Maps in R
Contains an Administrative-Level-1 Map of the World
Contains Maps Used by the 'choroplethr' Package
Contains maps used by the choroplethr package
Generation of Different Animated Christmas Cards
Interface to Chromosome Counts Database API
Interactive Visualization and Mapping of Human Chromosomes
Interactive Visualization and Mapping of Chromosomes
Interactive Genomic Visualization of Biological Data
Analysis of chromosomal interactions data (correction,
segmentation and comparison)
Chronological objects which can handle dates and times
Chronological Objects which can Handle Dates and Times
Chunkwise Text-File Processing for 'dplyr'
Functions for Conditional Hypergeometric Distributions
Confidence or Prediction Intervals, Quantiles, and Probabilities
for Statistical Models
Causal Inference in Case-Control Studies
Toolbox for Connectivity Informatics Technology Initiative
('CIFTI') Files
Tools for Reading and Visualizing CIFTI Brain Files
Tools for Reading, Writing, Viewing and Manipulating CIFTI Files
R package for retrieving data from CIMIS.
A Computational Pipeline for Bulk 'ATAC-Seq' Profiles
Ready-to-Use Curated Gene Sets for 'cinaR'
Encryption and Decryption with Text Ciphers
Nonparametric estimation of monotone functions via isotonic regression and centered isotonic regression
Centered Isotonic Regression and Dose-Response Utilities
Curve Text Elements in 'Shiny' Using 'CircleType.js'
Extreme Value Analysis for Circular Data
Analysis and Visualization of Circular Data
Perform Forward and Backwards Chasing in Evidence Syntheses
Assigning tumor samples to CIT Breast Cancer Molecular Subtypes
from gene expression data
CIT Breast Cancer Molecular SubTypes Prediction
CIT Colon Cancer Molecular SubTypes Prediction
Clinical Trials with Intercurrent Events Simulator
RStudio Add-in to Insert Markdown Citations
'RStudio' Add-in to Insert Markdown Citations
Customer Intelligence Tool for Rapid Understandable Segmentation
Confidence Intervals Utilizing Uncertain Prior Information
Kabaila and Giri (2009) Confidence Interval
R Client for the 'Civis data science API'
R Client for 'Customer Journey Analytics' ('CJA') API
Heterogeneous Effects Analysis of Conjoint Experiments
Client for the Comprehensive Knowledge Archive Network ('CKAN')
'API'
Client for the Comprehensive Knowledge Archive Network ('CKAN')
API
Clust Along Chromosomes, a method to call gains/losses in CGH
array data
Clust Along Chromosomes, a method to call gains/losses in CGH array data
C++ implementations of phylogenetic calculations
C++ implementations of phylogenetic cladogenesis calculations
C++ Implementations of Phylogenetic Cladogenesis Calculations
Classical Age-Depth Modelling of Cores from Deposits
Distribution-Free Tests of Non-Nested Models
Construct Graphs of S4 Class Hierarchies
Projection Pursuit for supervised classification
Generates a Visualization of Classifier Performance as a Grid of
Diagnostic Plots
Explore classification models in high dimensions
Explore Classification Models in High Dimensions
Classification Accuracy and Consistency under IRT models.
Visualizing Classification Results by Classmaps
Robust multivariate classification using highly optimised SVM
ensembles
R Interface to the ClassyFire RESTful API
R Interface to the 'ClassyFire' REST API
Language Identifier based on CLD library
The Critical Care Clinical Data Processing Tools
A Tidy Data Model for Natural Language Processing
Testbench for Univariate Time Series Cleaning
Functions to Inspect, Impute, and Encode Data, and to Keep Track
of This Process
To Inspect, Impute, Encode, and Partition Data; and to Keep
Track of This Process
To Inspect and Manipulate Data; and to Keep Track of This
Process
Cleaning Geometries from Spatial Objects
Clean Class-Less 'R Markdown' HTML Documents
Simultaneous Variables Clustering and Regression
CLERE methodology for simultaneous variables clustering and
regression.
Composite Likelihood Estimation for Spatial Data
Clustering and Link Prediction Evaluation in R
Helpers for Developing Command Line Interfaces
Fix Data and Create Report Tables from Different Objects
Semi-Automatic Preprocessing of Messy Data with Change Tracking
for Dataset Cleaning
Analyzes click streams based on Markov chains
Analyzes clickstreams based on Markov chains
Analyzes Clickstreams based on Markov Chains
Analyzes Clickstreams Based on Markov Chains
Execute Command Line Programs Interactively
Easily Download and Visualise Climate Data from CliFlo
Censoring Data and Likelihood-Based Correlation Estimation
Climate analysis and downscaling package for monthly and daily data.
Climate analysis and empirical-statistical downscaling (ESD) package for monthly and daily data.
Climate analysis and empirical-statistical downscaling (ESD)
package for monthly and daily data.
Interface to Download Meteorological (and Hydrological) Datasets
Creates detailed seasonal plots of temperature and precipitation data
Estimating Climate Stability from Climate Model Data
Some Tools for Climatology: series homogenization, plus windrose
and Walter&Lieth diagrams
Climate Tools (Series Homogenization and Derived Products)
Precipitation and Temperature Indices for Climate Variability
Analysis
Climate Variability Indices for Ecological Modelling
Calculate Average Minimal Depth of a Maximal Subtree for
'ranger' Package Forests
Constrained L1-minimization for Inverse (covariance) Matrix
Estimation
Constrained L1-Minimization for Inverse (Covariance) Matrix
Estimation
Statistical Methods for Climate Sciences
Simulation and Analysis Tools for Clinical Dose Response
Modeling
General Utility Functions for Analysis of Clinical Data
Clinical Trial Design and Data Analysis Functions
Determine the Clinical Significance in Clinical Trials
Calculation of Hemodynamic Indexes from Clinical Monitoring
Hemodynamic Indexes Calculated from Clinical Monitoring
Hemodynamic Calculations from Clinical Monitoring
Clinical Natural Language Processing using 'spaCy', 'scispaCy',
and 'medspaCy'
Calculating Likelihoods by Pedigree Paring
Read and Write from the System Clipboard
Annotation of Isotopes, Adducts and Fragmentation Adducts for
in-Source LC/MS Metabolomics Data
Fitting exact conditional logistic regression with lasso and
elastic net penalties.
Fitting Exact Conditional Logistic Regression with Lasso and
Elastic Net Penalties
Lasso Estimation of Conditional Logistic Regression Models for
Matched Case-Control Studies
Lasso Estimation of Conditional Logistic Regression Models
Sparse Conditional Logistic Regression for Matched Studies
Composite Likelihood Inference for Spatial Ordinal Data with
Replications
Composite Likelihood Inference and Diagnostics for Replicated
Spatial Ordinal Data
Cloud-based MPI Parallel Proccessing for R (cloudRmpi)
Cloud-based MPI Parallel Processing for R (cloudRmpi)
Interface to the Google Cloud Machine Learning Platform
Curve Linear Regression via Dimension Reduction
Constrained Likelihood Ratio Tests for a Directed Acyclic Graph
Central Limit Theorem Experiments (Theoretical and Simulation)
Cluster-Robust (Sandwich) Variance Estimators with Small-Sample
Corrections
Clustering Method Based on Local Shrinking
Monitor Changes in Cluster Solutions of Dynamic Datasets
Wilcoxon Rank Sum Test for Clustered Data
Statistical Methods for Analyzing Clustered Matched Pair Data
Clustering Dose-Response Curves and Fitting Appropriate Models
to Them
Clusters of Effect Curves in Quantile Regression Models
Clusters of Effects Curves in Quantile Regression Models
k-Prototypes Clustering for Mixed Variable-Type Data
Easy Interface for Clustering a Set of Documents and Exploring
Group- Based Patterns
GUI for clustering data with spatial information
Cluster Analysis Extended Rousseeuw et al.
Functions for clustering (by Rousseeuw et al.)
"Finding Groups in Data": Cluster Analysis Extended Rousseeuw et
al.
Calculate the consensus clustering result from re-sampled
clustering experiments with the option of using multiple
algorithms and parameter
Consensus Clustering using Multiple Algorithms and Parameters
random cluster generation (with specified degree of separation)
Random Cluster Generation (with Specified Degree of Separation)
Identifying clusters in genomics data by recursive partitioning
Tools for Clustering High-Dimensional Data
Power calculations for cluster-randomized crossover trials
Power calculations for cluster-randomized and cluster-randomized
crossover trials
Power Calculations for Cluster-Randomized and Cluster-Randomized
Crossover Trials
Reproducibility of gene expression clusters
Reproducibility of Gene Expression Clusters
Calculate Various Forms of Cluster-Robust Standard Error
Calculate Cluster-Robust p-Values and Confidence Intervals
Searching for optimal clustering procedure for a data set
Searching for Optimal Clustering Procedure for a Data Set
Performs Tests for Cluster Tendency of a Data Set
Causal Effects from Observational Studies with Clustered
Interference
Explore clustering interactively using R and GGobi
A hierarchical clustering method based on genetic algorithms
Optimal Distance-Based Clustering for Multidimensional Data with
Sequential Constraint
Unbiased Cell Type Identification of Single-Cell Transcriptomic
Data
Unbiased Single-Cell Transcriptomic Data Cell Type
Identification
Evaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM)
Evaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM,
PBS/Torque)
Integrative Clustering for Heterogeneous Biomedical Datasets
A Parallel Clustering Non-Uniform Memory Access ('NUMA')
Optimized Package
Clustering Trajectories Anchored at Intervention Time
Methods for joint dimension reduction and clustering
Methods for Joint Dimension Reduction and Clustering
Visualise Clusterings at Different Resolutions
Variable Selection for Model-Based Clustering
Variable Selection for Gaussian Model-Based Clustering
Analysis of Cardiac Magnetic Resonance Images
Implementation of the Conic Multivariate Adaptive Regression
Splines in R
Covariance Matrix Adapting Evolutionary Strategy
Covariance Matrix Adaptation Evolution Strategy
Covariance Matrix Adaption Evolutionary Strategy
Conditional Mixture Modeling and Model-Based Clustering
An Implementation of the 'Congruent Matching Cells' Method
Computer Model Calibration for Deterministic and Stochastic
Simulators
Framework for Building Interfaces to Shell Commands
Bi-Level Selection of Conditional Main Effects
Collective Matrix Factorization for Recommender Systems
Access, Retrieve, and Work with CMHC Data
Computational Methods for Numerical Analysis
Subdistribution Analysis of Competing Risks
Continuous mark-specific relative risks for two groups
Analysis of Competing Risks Using Quantile Regressions
Use IPW to Estimate Treatment Effect under Competing Risks
R Implementation of Congruent Matching Profile Segments Method
Misc Functions of the Center for the Mathematical Research
Misc Functions of the Center for Mathematical Research
Statistical Methods for Composite Material Data
The Complex Multivariate Gaussian Distribution
A Package for Coincidence Analysis (CNA)
Causal Modeling with Coincidence Analysis
Optimizing Consistency and Coverage in Configurational Causal
Modeling
Canonical Non-symmetrical Correspondence Analysis in R
Canonical Non-Symmetrical Correspondence Analysis in R
Maximum Likelihood Estimation of a Log-Concave Density Function
Bayesian "Now-Cast" Estimation of Event Probabilities in
Multi-Party Democracies
Coalition Probabilities in Multi-Party Democracies
A collection of functions to help with analysis of coarse
infectious disease data
A collection of functions to help with analysis of coarsely
observed data
A Collection of Functions to Help with Analysis of Coarsely
Observed Data
Biclustering via Latent Block Model Adapted to Overdispersed
Count Data
COBS -- Constrained B-splines (Sparse matrix based)
COBS -- COnstrained B-Splines (Sparse matrix based)
COnstrained B-Splines (Sparse Matrix Based)
Constrained B-Splines (Sparse Matrix Based)
Constrained B-splines -- outdated 1999 version
Extracts Shared Variation in Collections of Datasets Using
Regression Models
Extract Shared Variation in Collections of Data Sets Using
Regression Models
Co-correspondence analysis ordination methods for community ecology
Statistical comparisons of two or more alpha coefficients
Statistical Comparisons of Two or more Alpha Coefficients
Output analysis and diagnostics for MCMC
Output Analysis and Diagnostics for MCMC
A Basic Set of Functions for Compositional Data Analysis
Compositional Data Analysis for Microbiome Studies
Learning Sparse Log-Ratios for Compositional Data
Markov chain Monte Carlo burn-in based on "bridge" statistics
Transformation-Free Linear Regression for Compositional Outcomes
and Predictors
Automatic Codebooks from Survey Metadata Encoded in Attributes
Automatic Codebooks from Metadata Encoded in Dataset Attributes
Generate 'CodeMeta' Metadata for R Packages
Generation of Code Names for Organizations, People, Projects,
and Whatever Else
Deterministic Categorization of Items Based on External Code
Data
The CODEX (Comorbidity, Obstruction, Dyspnea, and Previous
Severe Exacerbations) Index: Short and Medium-Term Prognosis in
Patients Hospitalized for Chronic Obstructive Pulmonary Disease
(COPD) Exacerbations
Seq2Seq Encoder-Decoder Model for Time-Feature Analysis Based on
Tensorflow
Alternative Coding Matrices for Factors in Linear Model Formulae
Alternative Factor Coding Matrices for Linear Model Formulae
Meta Analysis of Factor Analysis Based on CO-Occurrence Matrices
Robust Cronbach's alpha with missing and non-normal data
Robust Cronbach's Alpha and Mcdonald's Omega with Missing and
Non-normal Data
Robust Coefficient Alpha and Omega with Missing and Non-Normal
Data
Species coexistence modeling and analysis
Chronological Ordering for Fossils and Environmental Events
Cognitive Mapping Tools Based on Coding of Textual Sources
Authentication for 'Shiny' Apps with 'Amazon Cognito'
Contextualization and Evaluation of COI-5P Barcode Data
Conditional Inference Procedures in a Permutation Test Framework
Access 'CoinDesk' Bitcoin Price Index API
Get Cryptocurrencies Market Cap Prices from Coin Market Cap
Get 'Cryptocurrencies' Market Cap Prices from Coin Market Cap
Parameter Estimation and Inference in a Cointegrating Regression
Consistent Monitoring of Stationarity and Cointegrating
Relationships
Read big text files column by column, sometimes much bigger than
available RAM, into R.
Tests for column correlation in the presence of row correlation
cold: a package for Count Longitudinal Data
Constrained Optimization on Linear Function
Auxiliary Package for Package 'CollapsABEL'
Interactive Collapsible Tree Diagrams using 'D3.js'
Functions Related to the Collatz/Syracuse/3n+1 Problem
Quickly and Neatly Collect Arguments from One Environment to
Pass to Another
Quantified Risk Assessment Data Collection
Check for Namespace Collisions with Other Packages and Functions
on CRAN
Check for Namespace Collisions Across Packages and Functions on
CRAN
Effects of Collinearity in Distributed Lag and Other Models
Visualization the Effects of Collinearity in Distributed Lag
Models and Other Linear Models
Collapsed Latent Position Cluster Model for Social Networks
Dengue Cases and Climate Variables in Colombo Sri Lanka
Colocalisation tests of two genetic traits
Colocalisation Tests of Two Genetic Traits
Conduct Co-Localization Analysis of Fluorescence Microscopy
Images
Color Calculations with Emphasis on Spectral Data
Check Color Palettes for Problems with Color Vision Deficiency
Distance Metrics for Image Color Similarity
Implementation of Colored Independent Component Analysis and
Spatial Colored Independent Component Analysis
Simulate Temporally Autocorrelated Population Time Series
Extract Colors from Windows BMP, JPEG, PNG, TIFF, and SVG Format
Images
Plot and add custom coloring to Venn diagram for 3-dimensional
data.
Plot and add custom coloring to Venn diagrams for 2-dimensional,
3-dimensional and 4-dimensional data.
Coloring Wildlife Distributions in Space-Time
Colorize Old Images Using the 'DeOldify' Image Colorization API
Color Palettes using Colormaps Node Module
Optimized Rendering of Fold Changes and Confidence Values
A ggplot2 Extension to Visualize Two Variables per Color
Aesthetic Through Color Space Projections
A 'ggplot2' Extension to Visualize Two Variables per Color
Aesthetic Through Color Space Projections
Color Palettes for EPL, MLB, NBA, NHL, and NFL Teams
A Toolbox for Manipulating and Assessing Colors and Palettes
Tools for colors in a Hue-Saturation-Value (HSV) color model
A Colour Picker Widget for Shiny Apps, RStudio, R-markdown, and
'htmlwidgets'
A Colour Picker Tool for Shiny and for Selecting Colours in
Plots
Commonly Used Functions for R Shiny Applications
Creates Co-Occurrence Matrices for Spatial Data
Creates Co-Occurrence Matrices of Spatial Data
Analysis of Concept Maps and Concept Landscapes
A Combined Intercation Test for Unreplicated Two-Way Tables
A Combined Interaction Test for Unreplicated Two-Way Tables
Introduction to Some Combinatorial Relations
Calculate Scores and Marks for Track and Field Combined Events
Selection and Ranking of Omics Biomarkers Combinations Made Easy
Exact Test from the Combinations of Mutually Exclusive
Alterations (CoMEt) Algorithm
Models and Equations for Human Comfort Research
Call Functions Without Commas Between Arguments
Print Nicely Formatted Comments for use in Script Files
Print Nicely Formatted Comments for Use in Script Files
Bindings to the 'CommonMark' Reference Implementation
Bindings to the CommonMark Reference Implementation
High Performance CommonMark and Github Markdown Rendering in R
JAR Files of the Apache Commons Mathematics Library
Feature Extraction and Model Estimation for Audio of Human
Speech
Categorizes ICD-9-CM codes based on published comorbidity
indices
Implements the Component Lasso Method Functions
Creates empty plots with compact axis notation
Comparison Functions for Clustering and Record Linkage
Compare Two Correlated C Indices with Right-censored Survival
Outcome
Compare Two Correlated C Indices with Right-Censored Survival
Outcome
Do a Git Style Diff of the Rows Between Two Dataframes with
Similar Structure
Compare MCMC Efficiency from 'nimble' and/or Other MCMC Engines
comparison of medical forms in CDISC ODM format
Multivariate likelihood ratio calculation and evaluation
Multivariate Likelihood Ratio Calculation and Evaluation
Conformational Manipulations of Protein Atomic Structures
C++ Implementation of Component-Wise Boosting
Event-specific incidence rates for competing risks data
Tools for Storage and Retrieval of Gene Expession Data
Tools for Retrieval and Storage of Functional Genomics Data
A Graphical User Interface for Antitrust and Trade Practitioners
Calculate the Confidence Interval for the Difference of ICCs
Simulation of recurrent event survival data
Calculate the Proportion of Permutations in Line with an
Informative Hypothesis
Robust linear regression with compositional data as covariates
Robust Linear Regression with Compositional Data as Covariates
Graphical User Environment for Compositional Data Analysis
Compositional, Multivariate and Univariate Time Series Outlier
Ensemble
Regression estimation based on the compound covariate methed
under the Cox proportional hazard model
Regression estimation based on the compound shrinkage method
under the Cox proportional hazard model
Regression estimation based on the compound covariate method
under the Cox proportional hazard model
Regression Estimation Based on the Compound Covariate Method
Under the Cox Proportional Hazard Model
Estimation and Gene Selection Based on the Compound Covariate
Method Under the Cox Proportional Hazard Model
Estimation, Gene Selection, and Survival Prediction Based on the
Compound Covariate Method Under the Cox Proportional Hazard
Model
Univariate Feature Selection and Compound Covariate for
Predicting Survival
Estimation, Gene Selection, and Survival Prediction Based on the
Compound Covariate Method Under the Cox Model
Univariate Feature Selection and Compound Covariate for
Predicting Survival under the Cox Model
Flexible Framework for Simulating Community Assembly
Interface with the United Nations Comtrade API
Calculate the AQI from Pollutant Concentration
Calculate the Dutch Air Quality Index (LKI)
Models Spatially Continuous and Discrete Population Genetic
Structure
'a la Carte' on Text (ConText) Embedding Regression
Human-Friendly Text from Unknown Strings
Connected Components of an Undirected Graph
Market Structure, Concentration and Inequality Measures
Computes and Plots Confidence (Consonance) Intervals, P-Values,
and S-Values to Form Consonance Curves (Functions)
Computes and Plots Confidence (Compatibility) Intervals,
P-Values, and S-Values to Form Consonance Curves (Functions)
Computes and Plots Consonance (Confidence) Intervals, P-Values,
and S-Values to Form Consonance and Surprisal Functions
Computes and Plots Compatibility (Confidence) Intervals,
P-Values, S-Values, & Likelihood Intervals to Form Consonance,
Surprisal, & Likelihood Functions
Computes & Plots Compatibility (Confidence), Surprisal, &
Likelihood Distributions
Approximate conditional inference for logistic and loglinear
models
Approximate Conditional Inference for Logistic and Loglinear
Models
Parameter estimation in conditional GEE for recurrent event gap
times
Parameter Estimation in Conditional GEE for Recurrent Event Gap
Times
Estimation of the Conditional Survival Function for Ordered
Multivariate Failure Time Data
Conditional Truncated Multivariate Normal Distribution
Computation of P Values and Bayes Factors for Conditioning Data
Control How Many Times Conditions are Thrown
Conditional Density Estimation with Neural Network Conditional
Mixtures
Create Tours in 'Shiny' Apps Using 'Shepherd.js'
Query-Driven Pipeline Execution and Query Templates
Conditional Visualization for Statistical Models
Interactive Conditional Visualization for Supervised and
Unsupervised Models in Shiny
Primal or Dual Cone Projections with Routines for
Shape-restricted Regression
Primal or Dual Cone Projections with Routines for Constrained
Regression
Visualization and Analysis of Statistical Measures of Confidence
Confidence Estimators for Individual Regression Predictions
Estimates and Bounds for the False Discovery Proportion, by
Permutation
Confidence Estimation of Environmental State Classifications
Manage Environment Specific Configuration Values
An Implementation of Parsing and Writing Configuration File
(JSON/INI/YAML)
An Implementation of Parsing and Writing Configuration File
(JSON/INI/YAML/TOML)
Descriptive Interpretations of Confidence Intervals
An Alternative Conflict Resolution Strategy
Conformal Prediction for Regression and Classification
Transductive and Inductive Conformal Predictions for
Classification Problems
Tools for Conformal Inference for Regression in Multivariate
Functional Setting
Conformal Inference Tools for Regression with Multivariate
Response
Jackknife(+) Predictive Intervals for Bayesian Models
Diagnostics for Confounding of Time-Varying and Other Joint
Exposures
Configural Frequencies Analysis Using Loglinear Modeling
Configural Frequencies Analysis Using Log-Linear Modeling
Configural Frequencies Analysis Using Log-linear Modeling
Downloads, Unpacks and Tidies Legislative Data from the
Brazilian Federal Senate and Chamber of Deputies
Algorithms for fitting circles, ellipses and conics based on the
work by Prof. Nikolai Chernov.
Algorithms for Fitting Circles, Ellipses and Conics Based on the
Work by Prof. Nikolai Chernov
An Implementation of Conjoint Analysis Method
A Parametric Method for Generating Synthetic Data
Estimations using Conley Standard Errors
A Tool for Reproducible Research by Converting 'LaTeX' Files
Generated by R Sweave to Rich Text Format Files
Utilities for Interacting with the 'RStudio Connect' Server API
Find disconnected sets in a two-way classification
Find disconnected subsets for a two-way classification
Find disconnected sets for two-way classification
Integrates with the 'RStudio' Connections Pane and 'pins'
Organize and Curate Your Content Within 'RStudio Connect'
Conover-Iman Test of Multiple Comparisons Using Rank Sums
Identifying Conservation Prioritization Methods Based on Data
Availability
An Easy and Quick Way to Loop a Character Vector as a Menu in
the Console
Reference on Constants, Units and Uncertainty
Identify Event Sequences Using Time Series Joins
Constrained, covariance-matching constrained and universal point
or block kriging
Constrained, Covariance-Matching Constrained and Universal Point
or Block Kriging
Continued Fraction Generators and Evaluators
Social Contact Matrices for 152 Countries
Deque, Set, and Dict - R6 Based Container Classes with Iterators
An Interface for Content-Based Identifiers
Simulation and Analysis of Contextual Multi-Armed Bandit
Policies
Statistical Analysis of Contingency Tables
Plots x,y,z Co-Ordinates in a Contour Map
Contouring of Non-Regular Three-Dimensional Data
A Tiny Contribution Table Generator Based on 'ggplot2'
Median Comparison for Two-Sample Right-Censored Survival Data
Quantile Comparison for Two-Sample Right-Censored Survival Data
Control Function Methods with Possibly Invalid Instrumental
Variables
Visualize the Effect of a Continuous Variable on a Time-to-Event
Outcome
Convert Gene IDs Between Each Other and Fetch Annotations from
Biomart
Quantify and assess the significance of convergent evolution
Quantifies and assesses the significance of convergent evolution
Disciplined Convex Programming in R using Convex.jl
Disciplined Convex Programming in R using 'Convex.jl'
Income Concentration Analysis with Complex Survey Samples
Probabilistic Species Co-occurrence Analysis in R
Probabilistic Species Co-Occurrence Analysis in R
Practical Tools for Scientific Computations and Visualizations
Co-Operation: Fast Covariance, Correlation, and Cosine
Similarity Operations
Cooperative Aspects of Linear Production Programming Problems
Cooperative aspects of optimal trees in weighted graphs
Basic Theoretical Copula, Empirical Copula, and Various Utility
Functions
General Copula Theory and Many Utility Functions
General Bivariate Copula Theory and Many Utility Functions
Fitting the copCAR Regression Model for Discrete Areal Data
Fitting the copCAR regression model for discrete areal data
Statistical methods to model and adjust for bias in meta-analysis
Statistical methods to model and adjust for bias in
meta-analysis
Coverage Probability Excursion (CoPE) Sets
Estimating Copula Entropy and Transfer Entropy
Tools for Nonparametric Martingale Posterior Sampling
Sample Size Calculation for Two Primary Time-to-Event Endpoints
in Clinical Trials
Virtual Patient Simulation by Copula Invariance Property
Fitting Additive Copula Regression Models for Binary Outcome
Regression
Estimation of Distribution Algorithms Based on Copula Theory
Estimation of Distribution Algorithms Based on Copulas
Assembling Long Gene Copies from Short Read Data
Hidden Markov Models of Character Evolution
Significance Testing of Rank Cross-Correlations under SRD
Tools for processing data after a Genome Wide Association Study
Apply 'colorffy' Color Gradients Within 'shiny' Elements
Generate correlated count random variables
Community Estimation in G-Models via CORD
Programmatic Analysis of Sediment Cores Using Computed
Tomography Imaging
Core Functionality for Simulating Quantities of Interest from
Generalised Linear Models
TDT for compound heterozygous and recessive models
R Binding for the 'Certifiably Optimal RulE ListS (Corels)'
Learner
Record Linkage, Incorporating Imputation for Missing Agreement
Patterns, and Modeling Correlation Patterns Between Fields
Count Regression for Correlated Observations with the
Beta-Binomial
Confounding Robust Independent Component Analysis for Noisy and
Grouped Data
The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Dataset
Efficient Estimation of Covariance and (Partial) Correlation
Statistics and data sets for corpus frequency data
Statistics and Data Sets for Corpus Frequency Data
A 'Shiny' App for Exploration of Text Collections
Managing, Querying and Analyzing Tokenized Text
Implementation of 2D Correlation Analysis
Implementation of 2D Correlation Analysis in R
Finding Associations in Position-Wise Aligned DNA Sequence
Dataset
Correlation Arrays and 2-Sample Correlation Matrices
Corrected the Coverage of Credible Sets from Bayesian Genetic
Fine Mapping
Correcting the Coverage of Credible Sets from Bayesian Genetic
Fine Mapping
Functions and Methods for Correspondence Regression
Multivariate Data Generation by Permutation
Speed Up Exploratory Data Analysis (EDA) with the Correlation
Funnel
Creating Correspondence Tables Between Two Statistical
Classifications
Explore Correlations Between Variables in a Machine Learning
Model
Permutation Tests of Correlation with Repeated Measurements
Software for Summarising and Evaluating STRUCTURE Output
Creates and Saves Out a Correlation Table with Significance
Levels Indicated
Arbitrary Bounding of Series and Time Series Objects
Some Empiric and Nonparametric Copula Models
Bound Constrained Optimal Sample Allocation
Bound Constrained Optimal Sample Size Allocation
Tools for estimating and predicting the cosinor model
Tools for Estimating and Predicting the Cosinor Model
Extended Tools for Cosinor Analysis of Rhythms
Mutational Signatures from COSMIC (Catalogue of Somatic
Mutations in Cancer)
Functions for cosmological distances, times, luminosities, etc.
Functions for Cosmological Distances, Times, Luminosities, Etc
COSSO, adaptive COSSO, variable selection for nonparametric
smoothing spline models.
COSSO, adaptive COSSO, variable selection for nonparametric
smoothing spline (quantile) regression models.
Fit Regularized Nonparametric Regression Models Using COSSO
Penalty.
Time series costationarity determination and tests of
stationarity.
Connect to and Work with CouchDB Databases
Penalized Estimation of Flexible Hidden Markov Models for Time
Series of Counts
Convert Counts to Fragments per Kilobase of Transcript per
Million (FPKM)
Transform Counts in RNA-Seq Data Analysis
Locates and Counts Pixels Within Color Range(s) in Images
A Countdown Timer for HTML Presentations, Documents, and Web
Apps
Comprehensive Automatized Evaluation of Distribution Models for
Count Data
Discrete Response Regression for High-Dimensional Data
Analysis of Biological Count Data, Especially from Single-Cell
RNA-Seq
Converts country names and coding schemes
Create and manipulate data frames that contain country names or
country coding schemes
Quantify United States County-Level Flood Measurements
Convert from UTC to Local Time for United States Counties
Compiles Meterological Data for U.S. Counties
Brownian Motion Processes for 'nlme'-Models
Covariance Estimation for Matrix Data with the Kronecker-Core
Decomposition
Latent Class Models with Covariate Effects on Underlying and
Measured Variables
Robust Covariance Estimation via Nearest Neighbor Cleaning
Computes covariance test for adaptive linear modelling
Local Polynomial Regression of State Dependent Covariates in
State-Space Models
Tests on Properties of Space-Time Covariance Functions
Produce Forest Plots to Visualize Covariate Effects
Test for Equality of Covariance Matrices
Load and Analyze Live Data from the CoViD-19 Pandemic
Load and Analyze Live Data from the COVID-19 Pandemic
Selected 'Drugbank' Drugs for COVID-19 Treatment Related Data in
R Format
Pulling Clean Data from Covid19india.org
The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Italy Dataset
Fetches Data on Covid-19 Mobility Trends from Different Sources
Pulls the Covid-19 Data from the New York Times Public Data
Source
The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Data in Sri
Lanka
COVID-19 Cases in Switzerland and Principality of Liechtenstein
Client for Delphi's 'COVIDcast Epidata' API
Descarga y analiza datos de COVID-19 en México
Estimate the Unit-Wide Probability of COVID-19
Subnational Data for the Covid-19 Outbreak
Subnational Data for the COVID-19 Outbreak
Subnational Data for COVID-19 Epidemiology
A simultaneous regression model for the mean and covariance
Tests for Determining if the Covariance Structure of
2-Dimensional Data is Separable
VITA and IG Simulation for Given Covariance and Marginals
VITA, IG and PLSIM Simulation for Given Covariance and Marginals
Performs Segmented Linear Regression on Two Independent
Variables
Streamlined Plot Theme and Plot Annotations for 'ggplot2'
Messages, Warnings, Strings with Ascii Animals
Duration-Based Quantities of Interest for the Cox Proportional
Hazards Model
Cox-type models for interval-censored data
Cox-Type Models for Interval-Censored Data
Cox Mixed-Effects Models for Genome-Wide Association Studies
Cox Mixed-Effects Model for Genome-Wide Association Studies
Sparse Estimation of Cox Proportional Hazards Models via
Approximated Information Criterion
Stochastic Gradient Descent log-Likelihood Estimation in Cox
Proportional Hazards Model
Cox regression with Firth's penalized likelihood
Cox Regression with Firth's Penalized Likelihood
Fit Robustly Proportional Hazards Regression Model
Cox Proportional Hazards Regression for Right Truncated Data
Cox Proportional Hazards Regression for Right-Truncated Data
Confirmatory Path Analysis Through 'd-sep' Tests
Confirmatory Path Analysis through the d-sep tests
Methods to perform Common Principal Component Analysis (CPCA)
Changepoint Analysis using Censored Time Series Data
Classification with Parallel Factor Analysis
Parallelized Genomic Prediction and GWAS
Monte Carlo EM algorithms and Bayesian methods for fitting
Tweedie compound Poisson linear models
Sequential Parametric and Nonparametric Change Detection
Sequential and Batch Change Detection Using Parametric and
Nonparametric Methods
Detection of Multiple Changes in Slope in Univariate Time-Series
Fast Implementation of Dijkstra Algorithm
Algorithms for Routing and Solving the Traffic Assignment
Problem
Check 'C' and 'C++' Files using 'Cppcheck'
Probabilistic Composition of Correlated Preference
Conditional Probit Model for Analysing Continuous Outcomes
Functions for Working with Danish CPR Numbers
Load CPS Microdata into R Using the 'Census Bureau Data' API
Change-Point Detection by Sample-Splitting Methods
Simulating Survival Data from Change-Point Hazard Distributions
A Toolbox for Using the CPS’s Voting and Registration Supplement
Quantile, Composite Quantile Regression and Regularized Versions
Conditional ML for Quadratic Exponential Models for Binary Panel
Data
Conditional Maximum Likelihood for Quadratic Exponential Models
for Binary Panel Data
Testing Differences Between Competing Risks Models and Their
Visualisations
Probabilistic damage tolerance analysis for fatigue cracking of
metallic aerospace structures
Multivariate nonparametric Cramer-Test for the two-sample-problem
Multivariate nonparametric Cramer-Test for the
two-sample-problem
Multivariate Nonparametric Cramer-Test for the
Two-Sample-Problem
Network Analysis of Dependencies of CRAN Packages
Download Logs from the RStudio CRAN Mirror
Download Logs from the 'RStudio' 'CRAN' Mirror
Package Directives and Collaboration Networks in CRAN
Various R tools for http://crantastic.org/
Conditional Random Sampling Sparse Matrices
Fit continuous-time correlated random walk models for animal movement data
Fit continuous-time correlated random walk models for animal
movement data
Fit continuous-time correlated random walk models to animal
movement data
Fit Continuous-Time Correlated Random Walk Models to Animal
Movement Data
Categorical Randomized Block Data Analysis
Censored Regression with Conditional Heteroscedasticity
Univariate Analysis of Cluster Trials with Multiple Outcomes
Tools for Managing SSH and Git Credentials
Build Binary Classification Models in One Integrated Offering
Toolkit for Credit Modeling Analysis and Visualization
Toolkit for Credit Modeling, Analysis and Visualization
Simple Conjoint Tidying, Analysis, and Visualization
A Probabilistic Approach to Reconstruct Past Climates Using
Biological Climate Proxies
A Probabilistic Approach to Reconstruct Past Climates Using
Palaeoecological Datasets
Conditional Random Fields for Labelling Sequential Data in
Natural Language Processing
Analyze Cricketers Based on ESPN Cricinfo Statsguru
Analyze Cricketers and Cricket Teams Based on ESPN Cricinfo
Statsguru
Group-Based Modelling of Longitudinal Data
Access Crime Data from the Open Crime Database
Statistical Methods for Crime Series Linkage
A Comprehensive Set of Functions to Clean, Analyze, and Present
Crime Data
Fits a Model that Partitions the Covariate Space into Blocks in
a Data- Adaptive Way
Modeling Fissile Material Operations in Nuclear Facilities
An Implementation of the Critical Path Method
Object-Oriented Implementation of CRM Designs
Cellwise Robust M-Regression and SPADIMO
Fetch 'Scholary' Full Text from 'Crossref'
CCMN and other noRMalizatioN methods for metabolomics data
CCMN and Other Normalization Methods for Metabolomics Data
Downloads and Builds datasets for Climate Reference Network
Implementation Helper for [ and [<- Of Custom Matrix-Like Types
Implementation Helper for '[' and '[<-' of Custom Matrix-Like
Types
A Dashboard to Visualize Scientific Workflows in 'Cromwell'
Schedule R Scripts and Processes with the 'cron' Job Scheduler
Create an HTML Vertical Timeline from a Data Frame in
'rmarkdown' and 'shiny'
Climate Crop Zoning Based in Air Temperature for Brazil
Open Data of Agricultural Production of Crops of Peru
Crop Growing Degree Days and Agrometeorological Calculations
Changepoints for a Range of Penalties (CROPS)
Confidence intervals for crossover points of two simple
regression lines
Design and Randomization in Crossover Studies
Detection of cross-hybridization events in microarray experiments
Detection of cross-hybridization events in microarray
experiments
Apply Functions to All Combinations of List Elements
Cross-Design & Cross-Format Network Meta-Analysis and Regression
Joint Distribution of Number of Crossings and Longest Run
Inter-Widget Interactivity for HTML Widgets
Identification of Functionally Relevant Sub-Graphs
Analysis of Graph-Structured Data with a Focus on
Protein-Protein Interaction Networks
Cross-Fitting for Doubly Robust Evaluation of High-Dimensional
Surrogate Markers
Rename and Encode Data Frames Using External Crosswalk Files
Constrained Regression Model for an Ordinal Response and Ordinal
Predictors
Cross-Recurrence Quantification Analysis for Categorical and
Continuous Time-Series
Recurrence Quantification Analysis for Categorical and
Continuous Time-Series
Cross-Recurrence Quantification Analysis for Dynamic Natural
Language Processing
Competing risks regression for Stratified and Clustered data
Competing Risks Regression for Stratified and Clustered Data
Bias-Corrected Variance for Competing Risks Regression with
Clustered Data
Penalized Variable Selection in Competing Risks Regression
Stepwise covariate selection for the Fine & Gray competing risks
regression model
Stepwise Covariate Selection for the Fine & Gray Competing Risks
Regression Model
A Robust and Powerful Test of Abnormal Stock Returns in
Long-Horizon Event Studies
Nonlinear Regression Parameters Estimation by 'CRS4HC' and
'CRS4HCe'
Tidying and Analyzing 'Coursera' Research Export Data
Obtain Suggested Coordinate Reference System Information for
Spatial Data
Interface to Climatic Research Unit Time-Series Version 3.21
Data
Download Crypto Currency Data from 'CoinMarketCap' without 'API'
Visualization and Analytics for the Cryptoverse
Calculate the Relative Crystallinity of Starch by XRD and FTIR
csSAM - cell-specific Significance Analysis of Microarrays
A Cross-Scale Analysis Tool for Model-Observation Visualization
and Integration
Bounds on Distributional Treatment Effect Parameters
Functions for Conditional Simulation in Regression-Scale Models
Download Data from the CSO 'StatBank' API
Accessing Csound functionality through R
Correlates of State Policy Data Set in R
Complete Discrete Fourier Transform (DFT) and Periodogram
A Tool for the Correlates of State Policy Project Data
Data Only: The Correlates of State Policy Project Dataset
Methods to Test Hypotheses on the Distribution of Spatial Point
Processes
Selection of Number of Clusters via Normalized Clustering
Instability
Substantive significance testing for regression estimates and
marginal effects.
Common Base-R Problems Relating to Lists
Read and Write CSV Files with Selected Conventions
Read and Write CSV on the Web (CSVW) Tables and Metadata
Import and Export CSV Data with a YAML Metadata Header
Analyze Circulating Tumor DNA Sequencing Data
Contingency Table Analysis Based on ML Fitting of MPH Models
A Procedure to Clean, Decompose and Aggregate Timeseries
Closed Testing with Globaltest for Pathway Analysis
Correlated Trait Locus (CTL) Mapping in R
Estimating the Parameters of a Continuous-Time Markov Chain from
Discrete-Time Data
Modeling Animal Movement with Continuous-Time Discrete-Space
Markov Chains
Collaborative Targeted Maximum Likelihood Estimation
Censored and Truncated Quantile Regression
Retrieve and Analyze Information on Clinical Trials from Public
Registers
Retrieve and Analyze Clinical Trials in Public Registers
Query Data from U.S. National Library of Medicine's Clinical
Trials Database
Assess the Stability of Candidate Housekeeping Genes
Continuous Time Structural Equation Modelling
Continuous Time SEM - 'OpenMx' Based Functions
Adaptive multivariate integration over hypercubes
Adaptive Multivariate Integration over Hypercubes
A Vector Spatio-Temporal Data Structure for Data Analysis
Computation of a Cubic B-Spline Basis and Its Derivatives
R Interface for the RAPIDS cuML Suite of Libraries
CUDA Parallel Implementation of a Bayesian Multilevel Model for
fMRI Data Analysis
Data sets for the examples used in the package "cudaBayesreg"
Tools, Measures and Statistical Tests for Cultural Evolution
Change point detection in genomic sequences
Change Point Detection in Genomic Sequences
Extends ddply to allow calculation of cumulative quantities.
Cumulative Percent Decay Curve Generator
Tools to Transform 'cURL' Command-Line Calls to 'httr' Requests
Partial Function Application with %<%, %-<%, and %><%
Confidence Intervals for the Current Status Model
Finds Binary Outcome Designs Using Stochastic Curtailment
curvHDR filtering of flow cytometry samples
Tukey Curve Depth and Distance in the Space of Curves
Multiple Curve Comparisons Using Parametric Bootstrap
Test the equality of two curves, or one curve with 0.
The package will formally test two curves represented by
discrete data sets to be statistically equal or not when the
errors of the two curves were assumed either equal or not using
the tube formula to calculate the tail probabilities.
Cusp Catastrophe Model Fitting Using Maximum Likelihood
Cusp-Catastrophe Model Fitting Using Maximum Likelihood
Custom Made Gauss Quadrature Nodes and Weights
Extended Version of Layout Functionality for 'Base' and 'Grid'
Graphics Systems
Arrange Elements on the R's Drawing Area or Inside the
PowerPoint's Slide
Customized Training for Lasso and Elastic-Net Regularized
Generalized Linear Models
Customizable Higher-Order Recipe Step Functions
CUSUM Charts for Monitoring of Hospital Performance
Cumulative Sum (CUSUM) Charts for Monitoring of Hospital
Performance
CUTOFF: A Spatio-temporal Imputation Method
Determine and Evaluate Optimal Cutpoints in Binary
Classification Tasks
An R package to perform LPUE standardization and stock
assessment of the English Channel cuttlefish stock using a
two-stage biomass model
Cross-Validated Area Under the ROC Curve Confidence Intervals
Cross-validation tools for regression models
Compute Expected Shortfall and Value at Risk for Continuous
Distributions
Coefficient of Variation (CV) with Confidence Intervals (CI)
Efficient Design and Analysis of Cluster Randomized Trials
Tests for the Equality of Coefficients of Variation from
Multiple Groups
Cramer von Mises Tests for Discrete or Grouped Distributions
Majorization Minimization by Coordinate Descent Algorithm for
Concave Penalized Logistic Regression for High Dimensional Data
Penalized Logistic Regression Model using Majorization
Minimization by Coordinate Descent (MMCD) Algorithm
Calculate the predictive squared correlation coefficient.
Calculate the predictive squared correlation coefficient
SEM Model Comparison with K-Fold Cross-Validation
Tools to create, modify and manage 'CWB' Corpora
Tools to Create, Modify and Manage 'CWB' Corpora
CWH's functions for Maths, Plotting, Printing, Statistics, Strings, and Tools
CWH's functions for maths, plotting, printing, statistics,
strings, and tools
Miscellaneous Functions for maths, plotting, printing,
statistics, strings, and tools
Miscellaneous Functions for math, plotting, printing,
statistics, strings, and tools
Miscellaneous Functions for Math, Plotting, Printing,
Statistics, Strings, and Tools
Cauchy Weighted Joint Test for Pharmacogenetics Analysis
A Toolbox for Modelling Species Coexistence in R
R/C++ Tools for Literate Statistical Practice
Extend 'cxxfunction' by Saving the Dynamic Shared Objects
extend cxxfunction by saving the dynamic shared objects
Cyanobacteria Population Identification for Flow Cytometry
Cycle Routing and Data for Cycling Advocacy
Survival Modeling with a Periodic Hazard Function
Circular-Linear Copulas with Angular Symmetry for Movement Data
Query Team Cymru IP Address, Autonomous System Number (ASN),
Border Gateway Protocol (BGP), Bogon and Malware Hash Data
Services
Query 'Team Cymru' 'IP' Address, Autonomous System Number
('ASN'), Border Gateway Protocol ('BGP'), Bogon and 'Malware'
Hash Data Services
Cycle and Phase Identification for mastication data
Agent-Based Model for Taenia_solium Transmission and Control
Plot Fan Plots for Cytometry Data using 'ggplot2'
Automated Cytometry Gating and Annotation
Use Open Data from the Czech Statistical Office in R
Tools for creating D3 JavaScript directed network graphs from R
Tools for creating D3 JavaScript network and tree graphs from R
Tools for creating D3 JavaScript network, tree, dendrogram, and
Sankey graphs from R
Create Interactive Collapsible Trees with the JavaScript 'D3'
Library
Interactive Heat Maps Using 'htmlwidgets' and 'D3.js'
Fast and Beautiful Interactive Visualization for 'Markdown' and
'Shiny'
Interface to 'D4Science' 'StorageHub' API
Deterministic Blockmodeling of Signed and Two-Mode Networks
Deterministic Blockmodeling of Signed, One-Mode and Two-Mode
Networks
Distance Covariance and Correlation for Time Series Analysis
Genetic Algorithm with Incomplete Dominance for Feature
Selection
Independence Testing via Hilbert Schmidt Independence Criterion
Time Series Regression Models with Distributed Lag Models
Dynamic Modeling and Parameter Estimation in ODE Models
Automated Analysis of Multiplex Digital PCR Data
A BSA Software for Detecting All Types of QTLs in BC, DH, RIL
and F2
Multi-Way Spherical Clustering via Degree-Corrected Tensor Block
Models
Damped Anderson Acceleration with Epsilon Monotonicity for
Accelerating EM-Like Monotone Algorithms
Data Analysis using Bootstrap-Coupled Estimation
Three-Way Data Analysis Through Densities
Three-Way / Multigroup Data Analysis Through Densities
Functions useful in the design and ANOVA of experiments
Functions Useful in the Design and ANOVA of Experiments
Design and Analysis of Experiments with R
Directed Acyclic Graphs: Analysis and Data Simulation
Learning directed acyclic graphs (DAGs) through bootstrap
aggregating
Spatial Vector Data for Danmarks Administrative Geografiske
Inddeling DAGI
Graphical Analysis of Structural Causal Models
DAGs with Omitted Objects Displayed (DAGWOOD)
Interface with Google Cloud Document AI API
Data Quality Reporting for Temporal Datasets
Automating the Fitting of Double Linear Mixed Models in 'JAGS'
Automating the Fitting of Double Linear Mixed Models in 'JAGS'
and 'nimble'
Interface to Drosophila Activity Monitor System Result Files
Dams in the United States from the National Inventory of Dams
(NID)
Design and Analysis of Non-Inferiority Trials
Discriminant Adaptive Nearest Neighbor Classification
R Client for the Statistics Denmark Databank API
'purrr'-Like Apply Functions Over Input Elements
Data Quality Assessment for Process-Oriented Data
Package for Deep Architectures and Restricted Boltzmann Machines
Package for deep architectures and Restricted-Bolzmann-Machines
Importing and Analysing Snp and Silicodart Data Generated by
Genome-Wide Restriction Fragment Analysis
Importing and Analysing SNP and Silicodart Data Generated by
Genome-Wide Restriction Fragment Analysis
Auxiliary Data Package for Our Main Package 'dartR'
Statistical Tools to Analyze Your Darts Game
An Interface to the 'dash' Ecosystem for Authoring Reactive Web
Applications
Core Interactive UI Components for 'Dash'
Interactive React-Based Pivot Tables for Dash
Core Interactive Table Component for 'dash'
Interactive Data Visualization with D3.js
Customise the Appearance of 'shinydashboard' Applications using
Themes
Just like a data.frame but without rownames, up to 10 times faster, up to 10 times less memory
Extension of data.frame to allow i and j to be expressions of column names.
Extension of data.frame. i and j expressions, keys and binary search.
Extension of data.frame for fast subset, fast merge and fast
grouping.
Extension of data.frame for fast indexing, fast ordered joins
and fast grouping.
Extension of data.frame for fast indexing, fast ordered joins,
fast assignment, fast grouping and list columns.
General Purpose Hierarchical Data Structure
Main Package for Working with 'data.world' Data Sets
Functions and Add-Ins for Working with 'data.world' Data Sets
and Projects
Wrapper for 'TCdata360' and 'Govdata360' API
Compare Two Data Frames and Summarise the Difference
A Suite of Checks for Identification of Potential Errors in a
Data Frame as Part of the Data Cleaning Process
A Suite of Checks for Identification of Potential Errors in a
Data Frame as Part of the Data Screening Process
Create and Append a Data Dictionary for an R Dataset
Performs variable level data quality checks and generates
summary statistics
Reproducible Data Screening Checks and Report of Possible Errors
Retrieval Functions for USGS and EPA Hydrologic and Water
Quality Data
Retrieval Functions for USGS and EPA Hydrology and Water Quality
Data
Data Frame Column Name, Class and Value Checking
Interactive and Reproducible Data Cleaning
Divide and Recombine for Large, Complex Data
Familiarity with Dataframes Before Data Manipulation
dataframes2xls writes data frames to xls files
Estimating Finite State Machine Models from Data
Calls Real Time APIs from Data Gov Singapore
An R package to convert data sets for import into JAGS, WinBUGS
and OpenBUGS and to generate data.frames for predicting the
effects of particular variables.
A system for mapping foreign objects to R variables and
environments
Create Interactive Web Maps with the 'JavaScript Datamaps'
Library
Merging of overlapping and inconsistent data
Merging of Overlapping and Inconsistent Data
Modules to Import and Manipulate Data in 'Shiny'
Data and Functions to Accompany Analisis De Datos Con R
Create, Refine, and Cluster Data Nuggets
Easily Source Publicly Available Data on Derivatives
A Flexible Container to Transport and Manipulate Data and
Associated Resources
Efficient and Flexible Data Preprocessing Tools
Data Quality in Epidemiological Research
C3S Quality Control Tools for Historical Climate Data
Data Bank for Statistical Analysis and Visualization
Row by Row Data Processing Tool, Using 'DataSailr' Script
Fast Row by Row Data Processing Tool, Using 'Sailr' Language
Fast Row by Row Data Processing Tool, Using 'Sailr' Script
Row by Row Data Processing Tool, Using 'Sailr' Script
Graphical Interface for Loading Datasets
Datasets from the Book "An Introduction to Clustering with R"
Create Lightweight Schema.org Descriptions of Data
An Implementation of a SAS-Style Data Step
Support functions for packages VBmix, semisupKernelPCA, and
patchPlot.
Data and Workspace Browser for Terminals
Easy Data Wrangling and Statistical Transformations
Simplify Access to Data from the Amazon Region
Standardize Dates in Different Formats or with Missing Data
Scientific Data on Time of Lineage Divergence for Your Taxa
Traduce al Español Varios Conjuntos de Datos de Práctica
Preparation of Object Dating Ranges for Density Plots (Aoristic
Analysis)
Compact Standard for Australian Phone Numbers
Functions for "Data Analysis in Vegetation Ecology"
Discriminant analysis with additional information
Discriminant Analysis with Additional Information
Calculating Days' Supply and Daily Dose of Prescriptions
A Database Exploration Tool with Assisted Querying and Schema
Exploration
Provides a graphical user interface to connect with databases
that use MySQL.
Goodmess-of-fit and two sample comparison tests using sample
entropy
Goodness-of-fit and two sample comparison tests using sample
entropy
Confidence Interval for Matrix Completion via De-Biased
Estimator
Produce R Functions to Create HTML Forms Based on SQL Meta Data
Discrete Bayesian Additive Regression Trees Sampler
A Tool to Ensure the Validity of Database Writes
Read and Write Files to SQLite Databases
Generalised Linear Models by Subsampling and One-Step Polishing
'DBHYDRO' Hydrologic and Water Quality Data
Compute the NPMLE of distribution from doubly censored data
Distance-based measures of spatial structures
Distance-Based Measures of Spatial Structures
Dynamic Bayesian Network Learning and Inference
Dynamic Bayesian Network Structure Learning, Parameter Learning
and Forecasting
Simplifies Plotting Data Inside Databases
Density Based Clustering of Applications with Noise (DBSCAN)
Density Based Clustering of Applications with Noise (DBSCAN) and
Related Algorithms
Density-Based Spatial Clustering of Applications with Noise
(DBSCAN) and Related Algorithms
Inferring Disease Networks via Differential Network Inference
Inferring Condition-Specific Networks via Differential Network
Inference
an open-source R package for analysing domain-centric ontologies
and annotations
an R package tailored to the needs of analysing ontologies and
annotations on protein domains
Analysis of ontologies and protein domain annotations.
Analysis of ontologies and protein domain annotations
Analysis of Ontologies and Protein Domain Annotations
DCC Models with GARCH-MIDAS Specifications in the Univariate
Step
Fast Computation of Distance Correlations
Metadata Validation for Data Coordinating Centers
A Package for Medical Image Analysis (S4 implementation)
A Package for Image Analysis of DCE-MRI (S4 Implementation)
Genetic Relatedness Between Polyclonal Infections
Data Cloning and MCMC Tools for Maximum Likelihood Methods
Information Matrix for Diagnostic Classification Models
Hierarchical Models Made Easy with Data Cloning
Modify Data Using Externally Defined Modification Rules
Attribute profile estimation using Diagnostic Classification
Models and MCMC
Providing Fast and Flexible Functions for Distance Correlation
Analysis
A Fast Implementation of Distance Covariance
Decision Curve Analysis for Model Evaluation
Conventional Cross-validation statistics for climate-growth
model
DDalpha-classifier, depth-calculating methods and associated
functions
Depth-based Classification and Calculation of Data Depth
Depth-Based Classification and Calculation of Data Depth
Dynamical Deterministic Effects Propagation Networks: Infer
signalling networks for timecourse RPPA data.
Dynamic Deterministic Effects Propagation Networks: Infer
signalling networks for timecourse RPPA data.
The Data Defect Index for Samples that May not be IID
Diagonally Dominant Principal Component Analysis
Analysis and Visualization of Droplet Digital PCR in R and on
the Web
Multi-Data-Driven Sparse PLS Robust to Missing Samples
Data-Driven Sparse PLS Robust to Missing Samples for Mono and
Multi-Block Data Sets
Data-Driven Sparse Partial Least Squares Robust to Missing
Samples for Mono and Multi-Block Data Sets
Bayesian Inference for Differential Equations
Bifurcation Analysis of Ordinary Differential Equation Systems
Parameter Inference for Systems of Differential Equation
General solvers for ordinary differential equations (ODE) and for differential algebraic equations (DAE)
General solvers for initial value problems of ordinary
differential equations (ODE), partial differential equations
(PDE), differential algebraic equations (DAE), and delay
differential equations (DDE).
General Solvers for Initial Value Problems of Ordinary
Differential Equations (ODE), Partial Differential Equations
(PDE), Differential Algebraic Equations (DAE), and Delay
Differential Equations (DDE)
Solvers for Initial Value Problems of Differential Equations
(ODE, DAE, DDE)
General solvers for ordinary differential equations
(ODE) and for differential algebraic equations (DAE)
Solvers for Initial Value Problems of Differential Equations
('ODE', 'DAE', 'DDE')
General solvers for initial value problems of ordinary
differential equations (ODE), partial differential equations
(PDE) and differential algebraic equations (DAE)
Conventional and Fuzzy Data Envelopment Analysis
Learning Bayesian Networks with Mixed Variables
Deconvolution density estimation with adaptive methods for a
variable prone to measurement error
A Post-Clustering Denoiser for COI-5P Barcode Data
Debug Tool to Watch Objects/Expressions While Running an R
Script
Get energy data from the UK Dept of Energy and Climate Change
Get Energy Data from the UK Dept of Energy and Climate Change
Bindings for 'Mapbox' Ear Cutting Triangulation Library
Quantitative Support of Decision Making under Uncertainty
Differential Co-expression and Differential Expression Analysis
Differential Co-Expression and Differential Expression Analysis
Decode Coded Variables to Plain Text (and Vice Versa)
Decode Coded Variables to Plain Text and the Other Way Around
Time Series Prediction with PSF and Decomposition Methods (EMD
and EEMD)
Export Decomposition (Wang-Wei-Zhu and source)
Global Value Chains Decomposition (Wang-Wei-Zhu and Leontief)
Deconvolution Estimation in Measurement Error Models
Identifies Signatures Present in a Tumor Sample
Extend the Behaviour of a Function without Explicitly Modifying
it
Deductive correction of simple rounding, typing and sign errors
deducorrect: Deductive correction, deductive imputation, and
deterministic correction.
Deductive Correction, Deductive Imputation, and Deterministic
Correction
Data Correction and Imputation Using Deductive Methods
Clustering of Short Texts by Mixture of Unigrams and Its Deep
Extensions
Visualise and Explore the Deep Dependencies of R Packages
Sequential Design for Deep Gaussian Processes using MCMC
An Implementation of Deep Neural Network for Regression and
Classification
Interface to the 'DeepL' Translation API
Plotting Tools for Anyone Working in Deep Time
Fitting Deep Conditional Transformation Models
Change the Default Arguments in R Functions
Create FDA-Style Data and Program Definitions
Classify RGB Images into Forest or Non-Forest
Integration of One-Dimensional Functions with Double Exponential
Formulas
A Tool for Standardizing Amphibian Taxonomy
Detection of differentially expressed genes.
Models for Skewed Count Distributions Relevant to Networks
Density Estimation from GROuped Summary Statistics
Detection of Isotope Pattern of a Mass Spectrometric Measurement
Multiple Imputation for Recurrent Events
A Framework for Parallelizing Dependent Tasks
Delaunay Triangulation and Dirichlet (Voronoi) Tesselation.
Delaunay Triangulation and Dirichlet (Voronoi) Tessellation.
Delaunay Triangulation and Dirichlet (Voronoi) Tessellation
Estimation of multivariate densities with adaptive histograms
Estimation of Multivariate Densities Using Adaptive Partitions
Identification of dichotomous differential item functioning
(DIF) using Angoff's Delta Plot method
Identification of Dichotomous Differential Item Functioning
(DIF) using Angoff's Delta Plot Method
Quantify Rhythmic Gene Co-Expression Relative to a Reference
Decision Making Trial and Evaluation Laboratory Technique in R
Interfacing with Popular Polity, Institutional, and
Constitutional Datasets
Differential Expression from Multiple Indicators
Deming, Thiel-Sen and Passing-Bablock Regression
Deming, Theil-Sen, Passing-Bablock and Total Least Squares
Regression
Providing Demographic Table with the P-Value, Standardized Mean
Difference Value
Kernel Density Estimation for Demonstration Purposes
Runs a 'Shiny' App as Demo or Lists All Demo 'Shiny' Apps
Simulating Differential Equations with Data
Analysis of age-structured demographic models
Analysis of Age-Structured Demographic Models
Forecasting mortality, fertility, migration and population data
Forecasting Mortality, Fertility, Migration and Population Data
Optimal Design Emulators via Point Processes
A Complete Tool for Processing and Analyzing Dendrometer Data
A Tool for Processing and Analyzing Dendrometer Data
Extending 'dendrogram' Functionality in R
Extending 'Dendrogram' Functionality in R
Faster dendrogram manipulation using Rcpp
Faster Dendrogram Manipulation using 'Rcpp'
Nonlinear Methods for Analyzing Dendroclimatological Data
Linear and Nonlinear Methods for Analyzing Dendroclimatological
Data
Linear and Nonlinear Methods for Analyzing Daily and Monthly
Dendroclimatological Data
Extra functions to cut, label and colour dendrogram clusters
Extra Functions to Cut, Label and Colour Dendrogram Clusters
Forest Estimations and Dendrometric Computations
Sorting and reordering dendrogram nodes.
Modular Leaf Orering Methods for Dendrogram Nodes
Modular Leaf Ordering Methods for Dendrogram Nodes
Differential Expression Analysis Using a Bottom-Up Model
Statistical Analyses of De Novo Genetic Variants
Visualization of multivariate density functions and estimates with level set trees and shape trees, and visualization of multivariate data with tail trees
Visualization of multivariate, functions, sets, and data
Visualization of Multivariate Functions, Sets, and Data
Density Estimation via Bayesian Inference Engines
Functional Linear Mixed Models for Densely Sampled Data
Analysing Density Profiles from Resistance Drilling of Trees
Clustering by fast search and find of density peaks
Clustering by Fast Search and Find of Density Peaks
Density strips and other methods for compactly illustrating distributions
Density strips and other methods for compactly illustrating
distributions
Density Strips and Other Methods for Compactly Illustrating
Distributions
Simple Dengue Test and Vaccinate Cost Thresholds
Cache R Expressions, Taking Their Dependencies into Account
Inference for parametric and nonparametric models for dependent
truncation data
Inference for parametric and semiparametric models based on
dependent truncation data
Statistical inference for parametric and semiparametric models
based on dependently truncated data
Statistical Inference for Parametric and Semiparametric Models
Based on Dependently Truncated Data
Statistical Methods for the Analysis of Dependently Truncated
Data
A Utility Package to Help you Deal with "Pignas"
Dependent Mixture Models - Hidden Markov Models of GLMs and
Other Distributions in S4
Depth functions tools for multivariate analysis
Nonparametric Depth Functions for Multivariate Analysis
Functions and R Code to Accompany Derivatives Markets
Seasonal adjustment by frequency analysis
Seasonal Adjustment by Frequency Analysis
Describe Data in R Using Common Descriptive Statistics
Descriptive Statistics & Distributions Exploration
Generate Descriptive Statistics & Explore Statistical
Distributions
Produce Descriptive and Comparative Tables Easily
Optimal deseasonalization for geophysical time series using AR
fitting
Desirability Functions for Ranking, Selection, and Data
Integration
Desirability Functions for Ranking, Selecting, and Integrating
Data
Computational tool for designing genetical genomics experiments.
Finding Optimal Block Designs for a Generalised Linear Mixed
Model
Construction of Optimally Matched Samples for Randomized
Experiments and Observational Studies that are Balanced by
Design
Construction of Optimally Matched Samples for Randomized
Experiments and Observational Studies that are Balanced and
Representative by Design
Matched Samples that are Balanced and Representative by Design
Sample Size Calculation of Various Study Designs
Desirabiliy Function Optimization and Ranking
Desirability Function Optimization and Ranking
Function Optimization and Ranking via Desirability Functions
Desparsified Lasso Inference for Time Series
Plotting Field Plans for Agricultural Experiments
Create Details HTML Tag for Markdown and Package Documentation
Analyzing Wildlife Data with Detection Error
Detect Runs of Homozygosity and Runs of Heterozygosity in
Diploid Genomes
Detect Nonnormality in Meta-Analysis without Raw Data
Detect Data Containing Personally Identifiable Information
Detect and Check for Separation and Infinite Maximum Likelihood
Estimates
Density Estimation and Random Number Generation with
Distribution Element Trees
Start the detrendeR Graphical User Interface (GUI)
A Graphical User Interface (GUI) to Visualize and Analyze
Dendrochronological Data
detrendeR - A Graphical User Interface (GUI) to process and
visualize tree-ring data using R.
Clear and Condense Argument Check for User-Defined Functions
Quantify Relationship Between Developmental Rate and Temperature
in Ectotherms
Quantify the Relationship Between Development Rate and
Temperature in Ectotherms
Quantify Relationship Between Development Rate and Temperature
in Ectotherms
Tools to Make Developing R Packages Easier
Data Management and Basic Analysis of Tests
CML and Bayesian Calibration of Multistage Tests
Compare Two Dataframes and Return Adds, Changes, and Deletes
Degrees of Freedom Adjustment for Robust Standard Errors
Phase I/II Adaptive Dose-Finding Design for Combination Studies
Dose-finding by the continual reassessment method
Dose-Finding by the Continual Reassessment Method
Explore data.frames by plotting NA and classes of each variable
Meta-Analysis of Phase I Dose-Finding Early Clinical Trials
Phase I/II Adaptive Dose-Finding Design For MTA
Phase I/II Adaptive Dose-Finding Design for MTA
Detection and Analysis of Insect Defoliation Signals in Tree
Rings
Extrapolation and Bridging of Adult Information in Early Phase
Dose-Finding Paediatrics Studies
Phase I Control Charts (with Emphasis on Distribution-Free
Methods)
A Bayesian Dose-Finding Design using Pharmacokinetics(PK) for
Phase I Clinical Trials
Bayesian Dose-Finding Designs using Pharmacokinetics(PK) for
Phase I Clinical Trials
Bayesian Dose-Finding Designs using Pharmacokinetics (PK) for
Phase I Clinical Trials
Diewert and Fox's Method of Value Added Growth Decomposition
Capture-Recapture Estimation using Bayesian Model Averaging
Differential Geometric LARS (dgLARS) method
Differential Geometric Least Angle Regression
dgmb Simulating data for PLS structural models
Simulating Data for PLS Mode B Structural Models
Dynamic Estimation of Group-Level Opinion
Interface to 'dgpsi' for Deep and Linked Gaussian Process
Emulations
The Gumbel Distribution Functions and Gradients
Double Hierarchical Generalized Linear Models
Diagnostic Plot and Multivariate Summary Statistics of Weighted
Samples from Importance Sampling
Meta-Analysis of Diagnostic Accuracy Studies with Several
Cutpoints
Block Diagonal Extraction or Replacement
Functions for visualising simple graphs (networks), plotting flow diagrams
Functions for visualising simple graphs (networks), plotting
flow diagrams
Functions for Visualising Simple Graphs (Networks), Plotting
Flow Diagrams
Parse, Format, and Validate International Phone Numbers
Required 'libphonenumber' jars for the 'dialr' Package
Tools for Creating Tuning Parameter Values
Analysis and sampling grids from diamond partitions
Calculate Ecological Information and Diatom Based Indices
Calculate probabilities of various dice-rolling events
Calculate Probabilities of Various Dice-Rolling Events
Downloads Job Descriptions from Dice.com
Dictionaries for reading survey microdata from IBGE
Dictionaries for reading microdata surveys from IBGE
Retrieve the Dictionary Definitions of English Words
Treatment Effects with Multiple Periods and Groups
Two-Stage Difference-in-Differences Following Gardner (2021)
Imputation Estimator from Borusyak, Jaravel, and Spiess (2021)
Compute Recency Frequency Monetary Scores for your Customer Data
Defines some physical constants and dielectric functions
commonly used in optics, plasmonics.
Debris-Containing Droplet Identification using EM
Diagnostic Index Expectation Maximisation in R
R Interface to the ZEIT ONLINE Content API
Detection of Dichotomous Differential Item Functioning (DIF) by
Non-Linear Regression Function
Detection of Dichotomous Differential Item Functioning (DIF) by
Non- Linear Regression Function
Detection of Dichotomous Differential Item Functioning (DIF) and
Differential Distractor Functioning (DDF) by Non-Linear
Regression Models
Detection of Differential Item Functioning (DIF) and
Differential Distractor Functioning (DDF) by Non-Linear
Regression Models
DIF and DDF Detection by Non-Linear Regression Models
Some traditional methods to detect dichotomous differential item
functionning (DIF) in psychometrics.
Some traditional methods to detect dichotomous differential item
functioning (DIF) in psychometrics
Collection of methods to detect dichotomous differential item
functioning (DIF) in psychometrics
Collection of Methods to Detect Dichotomous Differential Item
Functioning (DIF)
Given a List of Gene Symbols, Performs Differential Enrichment
Analysis
Functions from the book Solving Differential Equations in R
Diffusion-based IRT models for Response and Response Time Data
Diffusion IRT models for Response and Response Time Data
Diffusion IRT Models for Response and Response Time Data
Detecting Gene Probes with Different Means or Variances Between
Two Groups
Multi-Fidelity Computer Experiments Using the Tuo-Wu-Yu Model
Fisher's z-Tests Concerning Difference of Correlations
Calculates Confidence Intervals for two Dependent Proportions
Compute the Difference Between Data Frames
Difference Metrics for Comparing Pairs of Maps
Metrics of Difference for Comparing Pairs of Maps
Metrics of Difference for Comparing Pairs of Maps or Pairs of
Variables
Computation of TES-Based Cell Differentiation Trees
Fast and Scalable Learning of Sparse Changes in High-Dimensional
Gaussian Graphical Model Structure
Solving Differential Equations (ODEs, SDEs, DDEs, DAEs)
Display Differences Between Two Files using Codediff Library
Baseline identification and peak decomposition for x-ray diffractograms
Baseline identification and peak decomposition for x-ray
diffractograms
Baseline Identification and Peak Decomposition for x-Ray
Diffractograms
Projects for Text Version Comparison and Analytics in R
Create cryptographic hash digests of R objects
Create Compact Hash Digests of R Objects
Create Cryptographic Hash Digests of R Objects
Tests for Detecting Irregular Digit Patterns
Deconvolution of Bulk RNA-Seq Data Based on Deep Learning
Data-Informed Link Strength. Combine multiple-relationship
networks into a single weighted network. Impute (fill-in)
missing network links.
A Framework for Dimensionality Reduction
Gathering Bibliographic Records from 'Digital Science
Dimensions' Using 'DSL' API
DiNAMIC A Method To Analyze Recurrent DNA Copy Number
Aberrations in Tumors
A Toolkit for Year-Quarter and Year-Month Dates
A Toolkit for Year-Quarter, Year-Month and Year-Isoweek Dates
Depth Importance in Precision Medicine (DIPM) Method
Conduct Direction-Projection-Permutation Tests and Display Plots
A Dipping Sauce for Data Analysis and Visualizations
Hartigan's dip test statistic for unimodality - corrected code
Hartigan's Dip Test Statistic for Unimodality - Corrected
Hartigan's dip test statistic for unimodality
Debiased Inverse Propensity Score Weighting
Direction Analysis for Pathways and Kinases
Direct labels for multicolor plots in lattice or ggplot2
Creates an Interactive Tree Structure of a Directory
Dirichlet model of consumer buying behavior for marketing research
Build Dirichlet Process Objects for Bayesian Modelling
Distributional Regression for Time to Event Data
Two-Steps Benchmarks for Time Series Disaggregation
Automated Retrieval of Disaster Event Data
Wrapper for the UN OCHA ReliefWeb Disaster Events API
Bayesian Multi-State Modelling of Chronic Disease Burden Data
Linear and Non-Linear AUC for Discounting Data
Cox Models for Time-to-Event Data with Nonparametric Discrete
Group-Specific Frailties
Discrete Laplace mixture inference using the EM algorithm
Discrete Laplace Mixture Inference using the EM Algorithm
Test for Discretized Normality in Ordinal Data
Discordance and Concordance of Transcriptomic Responses
Functions for Discordant Kinship Modeling
Analyze Group Patterns using Graph Theory in Educational
Settings
Checks Title, Abstract and Keywords to Optimise Discoverability
Multiple testing procedures for discrete test statistics
Functions to create and manipulate discrete random variables
Functions to Create and Manipulate Discrete Random Variables
Create and Manipulate Discrete Random Variables
Coordinate-Descent Algorithm for Discrete Data
Coordinate-Descent Algorithm for Learning Sparse Discrete
Bayesian Networks
Simulated Goodness-of-Fit Tests for Discrete Distributions
Data Preprocessing, Discretization for Classification
Data preprocessing, discretization for classification.
Model Wrappers for Discriminant Analysis
Discrimination of Alternate Reproductive Tactics (ARTs).
Discrimination of Alternative Reproductive Tactics (ARTs).
Data for Comparing Species Distribution Modeling Methods
Calculat SMR's from population and case data
Calculate SMR's from population and case data
Calculate observed and expected disease incidence counts from a
case file and population data.
Modelling Spatial Variation in Disease Risk for Areal Data
Estimation Methods for Markets in Disequilibrium
Estimation Methods for Markets in Equilibrium and Disequilibrium
Larger-than-RAM Disk-Based Data Manipulation Framework
A Pipeline to Analyze Resistance and Tolerance from Drug Disk
Diffusion Assays
2D Hausdorff and Simplex Dispersion Orderings
Disparity Filter Algorithm of Weighted Network
Disparity Filter Algorithm for Weighted Networks
Simulation of Demic Diffusion with Environmental Constraints
Create Disposable R Packages for Testing
Analysis of Disposition Effect on Financial Portfolios
Multiple Assemblage Dissimilarity for Orders q = 0-N
Utilities for making pairwise comparisons of multivariate data
Spatial Downscaling using the Dissever Algorithm
A Collection of Full Defined Distribution Tails
Calculates Study Size Required for Distance Sampling
Assessing Dissimilarity Between Multivariate Time Series
Computations over Distributed Data without Aggregation
Distributional Method for the Dichotomisation of Continuous
Outcomes
Download Occurrence Data of Vascular Plants in Germany from the
FLORKART Database
'R Markdown' Format for Scientific and Technical Writing
Model Distillation and Interpretability Methods for Machine
Learning Models
Method Functions for Confidence Intervals and to Distill
Information from an Object
Unified Interface to Distance, Dissimilarity, Similarity
Matrices
Object orientated implementation of distributions
Object oriented implementation of distributions
Object Oriented Implementation of Distributions
The Complete R6 Probability Distributions Interface
Documentation for packages distr, distrEx, distrSim, distrTEst
Documentation for packages distr, distrEx, distrSim, distrTEst,
distrTeach, distrMod, and distrEllipse
Documentation for Packages distr, distrEx, distrSim, distrTEst,
distrTeach, distrMod, and distrEllipse
Documentation for 'distr' Family of R Packages
S4 classes for elliptically contoured distributions
S4 Classes for Elliptically Contoured Distributions
Object orientated implementation of probability models
Object oriented implementation of probability models
Object Oriented Implementation of Probability Models
Package distr classes for distributions from Rmetrics
Distribution Classes for Distributions from Rmetrics
Simulation classes based on package distr
Simulation Classes Based on Package 'distr'
Estimation and Testing classes based on package distr
Estimation and Testing Classes Based on Package 'distr'
Extensions of package distr for teaching Stochastics/Statistics in secondary school
Extensions of package distr for teaching Stochastics/Statistics
in secondary school
Extensions of Package 'distr' for Teaching
Stochastics/Statistics in Secondary School
Framework for the Visualization of Distributional Regression
Models
Probability distributions based on TI-83 Plus
Estimate and Manage Empirical Distributions
A Test Environment for Database Requests
Report on Diversity and Inclusion in a Corporate Setting
Diversity Dynamics using Fossil Sampling Data
Provides tools for quality checks of georeferenced plant species
accessions.
Easily Install and Load Interactive Data Visualization Tools
Genetic diversity partition statistics and Informative locus
selection.
Genetic diversity partition statistics and Informative locus
selection using Fst, Gst, Dest(Jost Chao) G'st and In.
diveRsity: Genetic diversity partition statistics and
Informative locus selection using Fst, Gst, Dest(Jost Chao)
G'st and In.
A Comprehensive, General Purpose Population Genetics Analysis
Package
Evolutionary Trait Divergence Between Sister Species and Other
Paired Lineages
diversitree: comparative phylogenetic tests of diversification
diversitree: comparative phylogenetic analyses of
diversification
Comparative 'Phylogenetic' Analyses of Diversification
Comparative Phylogenetic Analyses of Diversification
Complex Split Procedures in Random Forests Through Candidate
Split Sampling
Innovative Complex Split Procedures in Random Forests Through
Candidate Split Sampling
Tools for Analysis of Diversity and Similarity in Biological
Systems
Calculate Diversity and Segregation Indices
Nearest Neighbour Contingency Table Analysis
Dixon's Ratio Test for Outlier Detection
Multistage Record Linkage and Case Definition for
Epidemiological Analysis
Record Linkage and Epidemiological Case Definitions in R
Diffusion kernels on a set of genotypes.
Use Dirichlet Laplace Prior to Solve Linear Regression Problem
and Do Variable Selection
Bayesian and Likelihood Analysis of Dynamic Linear Models
Tools for Data Diagnosis, Exploration, Transformation
Distributed-Lag Structural Equation Modelling with Second-Order
Polynomial Lag Shapes
Distributed-Lag Linear Structural Equation Modelling
Distributed-Lag Linear Structural Equation Models
Data Management Reporting Tool Version 1.0.1
Measurement Nonequivalence Effect Size Calculator
Model Based Clustering of Binary Dissimilarity Measurements
DiST - Diffusion Direction Smoothing and Tracking
Differential Network Analysis using Gene Pathways
DNET: dynamic networks via an integrative analysis of biological
networks and high-throughput digitised data
Dynamic NETworks via integrative analysis of digitised data in
terms of network, ontology and evolution
Integrative Analysis of Omics Data in Terms of Network,
Evolution and Ontology
Integrative analysis of digitised data in terms of network,
ontology and evolution
an open-source R package for omics data integrative analysis in
terms of network, evolution and ontology
Integrative analysis of omics data in terms of network,
evolution and ontology
Simulate Dynamic Networks using Exponential Random Graph Models
(ERGM) Family
Groupwise computations of summary statistics
Groupwise computations of summary statistics and other utilities
Groupwise computations of summary statistics, general linear
contrasts and other utilities
Groupwise summary statistics, general linear contrasts, LSMEANS
(least-squares-means), and other utilities
doBy - Groupwise summary statistics, general linear contrasts,
LSMEANS (least-squares-means), and other utilities
doBy - Groupwise summary statistics, LSmeans, general linear
contrasts, various utilities
Groupwise statistics, LSmeans, linear contrasts, utilities
Groupwise Statistics, LSmeans, Linear Contrasts, Utilities
doBy - Groupwise summary statistics, general linear contrasts,
population means (least-squares-means), and other utilities
Groupwise Statistics, LSmeans, Linear Estimates, Utilities
A Universal Foreach Parallel Adapter using the Future API of the
'future' Package
Foreach Parallel Adaptor using the Future API of the 'future'
Package
A Universal Foreach Parallel Adaptor using the Future API of the
'future' Package
Foreach parallel adaptor for the multicore package
Do Multiple Imputation-Based Semi-Supervised and Unsupervised
Learning
Foreach parallel adaptor for the Rmpi package
Foreach Parallel Adaptor for the Rmpi Package
Foreach parallel adaptor for the parallel package
Foreach Parallel Adaptor for the 'parallel' Package
Generic Reproducible Parallel Backend for foreach Loops
Generic Reproducible Parallel Backend for 'foreach' Loops
Foreach parallel adapter for the rredis package
'Foreach' Parallel Adapter Using the 'Redis' Database
Foreach parallel adaptor for the revoIPC package
Foreach parallel adaptor for the snow package
Foreach Parallel Adaptor for the 'snow' Package
Dimension Reduction for Outlier Detection
Data from the GLM Book by Dobson and Barnett
Measuring Concreteness in Natural Language
Distributed Representations of Sentences and Documents
Distributed Representations of Sentences, Documents and Topics
Automatic Reporter for Descriptive Analysis
Automatic Reporter for Inference Analysis
Use Docker Images to Process Rmarkdown Blocks
Creation of Lightweight Docker Images for Your Packages
docopt, commandline interface specification language
docopt, command-line interface specification language
Provides Docstring Capabilities to R Functions
Easily Check Data Consistency and Quality
Run 'roxygen2' on (Chunks of) Single Code Files
Extract Data Tables from Microsoft Word Documents
Extract Data Tables and Comments from Microsoft Word Documents
Extract Data Tables and Comments from 'Microsoft' 'Word'
Documents
Analysis of Design of Experiments for Biological Research
R Console Bindings for the 'Domino Command-Line Client'
Tools to Support Relative Importance Analysis
Nearest Neighbour Search with Variables on a Torus
Exploration of Dental Surface Topography
Dynamics of Return to Equilibrium During Multiple Inputs
Causal Effect Identification from Multiple Incomplete Data
Sources
Interactive Designing of Dose Finding Studies
Extract Drug Dosages from Free-Text Prescriptions
Enhanced Foreign Function Interface Supporting Long Vectors
Enhanced Assignment Operator to Overwrite or Grow Objects
Gene-Set Analysis via Decorrelation by Orthogonal Transformation
Create and Manage Configuration Profiles
Dot-and-Whisker Plots of Regression Coefficients from Tidy Data
Frames
Dot-and-Whisker Plots of Regression Results
Survivor Function Estimation for Doubly Interval-Censored
Failure Time Data
Enable Operators Containing the '?' Symbol
Syntax Highlighting and Automatic Linking
A package for downloading files over https
A package for downloading files over http and https
Implement Download Buttons in 'rmarkdown'
Downscale of RS Images using Deep Learning
A Tool to Scale Down Large Workflows for Testing
A Tool to Downsize Large Workflows for Testing
Dynamic Programming for Convex Clustering
Discriminative Parameter Learning of Bayesian Networks by
Differential Evolution
RStudio Addin for Teaching and Learning Data Manipulation Using
'dplyr'
Dirichlet Process Mixture model simulation for clustering and
image segmentation
Dirichlet Process Mixture Model Simulation for Clustering and
Image Segmentation
Determinantal Point Process Mixture Models
Data preprocessing and visualization functions for
classification
Data Pre-Processing and Visualization Functions for
Classification
Piecewise Linear Segmentation by Dynamic Programming
Enhance Shiny Apps with Customizable Modules
Methods for dimension reduction for regression
Methods for Dimension Reduction for Regression
Dose Response Data Analysis using the 4 Parameter Logistic (4PL)
Model
Dose Response Data Analysis using the 4 Parameter Logistic (4pl)
Model
Deep Time Redox Analysis of the Geobiology Ontology Network
Statistical Tools to Identify Dragon Kings
Drag and Drop Elements in 'Shiny' using 'Dragula Javascript
Library'
A Pipeline Toolkit for Reproducible Computation at Scale
Wrapper Functions for Producing Graphics
Draw Samples with the Desired Properties from a Data Set
Dose Response Models for Bayesian Model Averaging
Doubly Robust Generalized Estimating Equations
Concept Drift and Concept Shift Detection for Predictive Models
Distinguishing drift and natural selection as causes of
phenotypic differentiation
Estimation, Simulation and Reliability of Drifting Markov Models
Prioritizing Cancer Driver Genes Using Genomics Data
Regression and association models for clustered categorical responses
Regression and association models for repeated categorical data
Dual empirical likelihood inference under density ratio models
for multiple samples
Dual Empirical Likelihood Inference under Density Ratio Models
in the Presence of Multiple Samples
Dual empirical likelihood inference under density ratio models
in the presence of multiple samples
Analyze Drop Out of an Experiment or Survey
Doubly-Robust Estimators for Ordinal Outcomes
Statistical Modeling and Assessment of Drought
Efficient Doubly Robust Population Size Estimation
Efficient and Doubly Robust Population Size Estimation
Dose-Response Modeling with Smoothing Splines
Doubly-Robust Nonparametric Estimation and Inference
Drug Interaction Modeling Based on Loewe Additivity Following
Harbron's Approach
Drug Identification and Drug Name Correction with Automatic
Updates
Prepare Electronic Prescription Record Data to Estimate Drug
Exposure
Seasonal Adjustment of Daily Time Series
Discretization-based Direct Random Sample Generation
Discretization-Based Direct Random Sample Generation
Normalize & Denoise Droplet Single Cell Protein Data (CITE-seq)
Normalize & Denoise Droplet Single Cell Protein Data (CITE-Seq)
Dynamic Systems Estimation (time series package)
Dynamic Systems Estimation (Time Series Package)
Density surface modelling of distance sampling data
Density surface modelling (dsm) of distance sampling data
Density Surface Modelling of Distance Sampling Data
Data Science Box of Pandora Miscellaneous
Estimation and Simulation of Drifting Semi-Markov Models
A Language to Facilitate the Creation and Visualization of Two-
Dimensional Dynamical Systems
A Language to Facilitate Simulation and Visualization of
Two-Dimensional Dynamical Systems
Compute Directly Standardized Rates, Ratios and Differences
Tests and Confidence Intervals on Directly Standardized Rates
for Several Methods
Conditional Sensitivity Analysis for Matched Observational
Studies
Demonstrated Insensitivity to Bias in 2x2xK Contingency Tables
Simplifying Descriptive Frequencies and Statistics
Cell Type Deconvolution from Gene Expressions
Discrete Transmuted Generalized Inverse Weibull Distribution
Analysis of diffusion weighted imaging (DWI) data
Analysis of Diffusion Weighted Imaging (DWI) Data
Dose Transition Pathways for Continual Reassessment Method
Dynamic Treatment Regimes for Survival Analysis
Manipulate Date, POSIXct and hms Vectors
Time-Weighted Dynamic Time Warping for Remote Sensing Time
Series Analysis
Time-Weighted Dynamic Time Warping for Satellite Image Time
Series Analysis
Time Series Clustering with Dynamic Time Warping
Time Series Clustering with Dynamic Time Warping Distance
Time Series Clustering with Optimizations for the Dynamic Time
Warping Distance
Time Series Clustering Along with Optimizations for the Dynamic
Time Warping Distance
Automatic Differentiation with Dual Numbers
Dual Sparse Partial Least Squares Regression
Dual Scaling Analysis of Multiple Choice Data
Decimated and Undecimated 2D Complex Dual-Tree Wavelet Transform
Securely Wrangle Dataset According to Data Usage Agreement
Unpacking Assignment for Lists via Pattern Matching
DBI Package for the DuckDB Database Management System
Simple Client for the DuckDuckGo Instant Answer API
Displaying Changes Between Two Points Using Dumbbell Plots
Create dummy/indicator variables flexibly and efficiently
Automatic Creation of Dummies with Support for Predictive
Modeling
Dunn's test of multiple comparisons using rank sums
Dunn's Test Of Multiple Comparisons Using Rank Sums
Dunn's Test of Multiple Comparisons Using Rank Sums
Bayesian inference from count data using discrete uniform priors
Mixed Proportional Hazard Competing Risk Model
Discrete variations of a fractional Brownian motion
Faster Computation of Common Statistics and Miscellaneous
Functions
Convenience Functions, Moving Window Statistics, and Graphics
Dynamic VAR - Based Control Charts for Batch Process Monitoring
Read Binary Radar Files from 'DWD' (German Weather Service)
Tools for DYRESM-CAEDYM Model Development: Auto-Calibration and
Post-Processing
Tools for DYRESM-CAEDYM Model Development: Calibration Assistant
and Post-Processing
Detection of Chaotic and Regular Intervals in the Data
Interface to Dygraphs Interactive Time Series Charting Library
Interface to 'Dygraphs' Interactive Time Series Charting Library
Dynamic Mode Decomposition for Multivariate Time Feature
Prediction
Dynamic Logging for R Inspired by Configuration Driven
Development
dynBiplotGUI: Full Interactive GUI for Dynamic Biplot in R
Full Interactive GUI for Dynamic Biplot in R
Dynamic Models for Confidence and Response Time Distributions
Interactive visualization of dataframes and factorial planes
Fast Fourier Transform to Identify Associations Between Time
Course Omics Data
A Unified Mechanistic Model for the Population Dynamics of
Invasive Aedes Mosquitoes
Dynamic Simulation and Testing for Single-Equation ARDL Models
Methods for detection of clusters in hierarchical clustering dendrograms.
Methods for detection of clusters in hierarchical clustering
dendrograms.
Methods for Detection of Clusters in Hierarchical Clustering
Dendrograms
Dynamic Hazard Models using State Space Models
Fit a Stochastic Dynamical Array Model to Array Data
An Implementation of Dynamic TOPMODEL Hydrological Model in R
Algorithms for Helping Build Dynamic TOPMODEL Implementations
from Spatial Data
Implementation of the Dynamic TOPMODEL hydrological model
Implementation of the Dynamic TOPMODEL Hydrological Model
Complexity of Short and Coarse-Grained Time Series
Dimensionality Reduction Methods in a Common Format
Resisting Neighbor Label Attack in a Dynamic Network
Feature Importance for Dynamic Processes
Fitting Dynamic Frailty Models with the EM Algorithm
A Multi-Modal Simulator for Spearheading Single-Cell Omics
Analyses
Companion package to "Dynamic Prediction in Clinical Survival
Analysis"
Companion Package to "Dynamic Prediction in Clinical Survival
Analysis"
An R implementation of dynamic simulations of autoregressive
relationships
Dynamic Simulations of Autoregressive Relationships
Dynamic Stem Profile Models, AKA Tree Taper Equations
Common Functions for the Dynverse Packages
Common Functionality for the 'dynverse' Packages
Representing and Inferring Single-Cell Trajectories
Misc Functions of the Department of Statistics (e1071), TU Wien
Misc Functions of the Department of Statistics, Probability
Theory Group (Formerly: E1071), TU Wien
Dynamic Web Analytics for the Energy Industry
Dynamic Web-Based Analytics for the Energy Industry
Empirical Bayes Smoothing Splines with Correlated Errors
"Empirical Bayes Smoothing Splines with Correlated Errors"
Dynamic Model Averaging with Grid Search
Fetch Data from the Federal Reserve Economic Database
Leveraging eQTLs to Identify Individual-Level Tissue of Interest
for a Complex Trait
Quality Control and Semantic Enrichment of Datasets
Extended and enhanced Hierarchical Logistic Regression models
(so called Huisman-Olff-Fresco models).
Extended and enhanced Hierarchical Logistic Regression models
(so-called Huisman-Olff-Fresco models).
Extended hierarchical logistic regression (Huisman-Olff-Fresco)
models
Model-Based Gene Clustering for Genomics Data from
Paired/Matched Designs
Fitting log-Linear Models in Sparse Contingency Tables
Ensemble Methods for Multiple Change-Point Detection
Quantitative Exploration of Elastic Net Families for Generalized
Linear Models
Ensemble Penalized Cox Regression for Survival Prediction
Empirically Informed Random Trajectory Generation in 3-D
Ensemble Tool for Predictions from Species Distribution Models
eVenn: A powerful tool made to compare huge lists almost
instantaneously a plot Venn diagrams.
eVenn: A powerful tool to compare lists and draw Venn diagrams.
A Powerful Tool to Quickly Compare Huge Lists and Draw Venn
Diagrams
Fitting Dose-Response Models Using an Evolutionary Algorithm
Plots of the Empirical Attainment Function
Estimation of Transmissibility in the Early Stages of a Disease
Outbreak
Properties of Bayesian Early Gating Designs
Early Warning Signals Toolbox for Detecting Critical Transitions
in Timeseries
Early Warning Signals for Critical Transitions in Time Series
Earth: Multivariate Adaptive Regression Spline Models
Multivariate Adaptive Regression Spline Models
Parallel Implementation of 'ETERNA 3.40' for Prediction and
Analysis of Earth Tides
Derive a Color Palette from a Particular Location on Earth
Fetch the Cleveland Federal Reserve Bank easing policy tool
data.
Fetch and plot credit easing policy tool data.
Easily Computes the Differential Coexpression Analysis
Easily Performs Differential Coexpression Analysis
Tools to Easily Read/Write NetCDF Files into/from
Multidimensional R Arrays
Reading, Formatting, and Organizing the Panel Study of Income
Dynamics (PSID)
Searching and Retrieving Scientific Publication Data from PubMed
Search and Retrieve Scientific Publication Records from Pubmed
Search and Retrieve Scientific Publication Records from PubMed
Easy Interface to the Statistical Disclosure Control Package
'sdcTable'
Easy Interface to the Statistical Disclosure Control Package
'sdcTable' Extended with the 'GaussSuppression' Method
Ensemble Forecast Verification for Large Datasets
Ensemble Forecast Verification for Large Data Sets
Generate Alluvial Plots with a Single Line of Code
Analysis of variance and other important complementary analyzes
Analysis of Variance and Other Important Complementary Analyses
Quickly Extract and Marginalize U.S. Census Tables
Quickly Find, Extract, and Marginalize U.S. Census Tables
Easily Connect to Common Types of Databases
Interactive Scatter Plot and Volcano Plot Labels
Easily Build and Evaluate Machine Learning Models
Sample Size Estimation for Experimental Designs
Helpful Functions from Oliver Wyman Actuarial Consulting
Framework for Easy Statistical Modeling, Visualization, and
Reporting
Create Constraints for Small Test Assembly Problems
Spreadsheet Interface for Relational Databases
Data Management of Large Hierarchical Data
Educational Assessment Tools for Replication Methods
Miscellaneous Functions for the Analysis of Educational
Assessments
Genotyping using Next Generation Sequencing Data
Genotyping and SNP Detection using Next Generation Sequencing
Data
Genotyping and SNP calling using single-sample next generation
sequencing data
Entropy reweighting to create balanced samples
Entropy Reweighting to Create Balanced Samples
Robust Empirical Bayes Confidence Intervals
Empirical Bayes Estimation of Dynamic Bayesian Networks
Access and Analyze eBird Status and Trends Data
Ensemble-Based Methods for Class Imbalance Problem
Solve the Empirical Bayes Normal Means Problem
Implementation of the Empirical Bayes Method
Working with netCDF for Essential Biodiversity Variables
An Automated Way to Estimate EC50 for Stratified Datasets
Excess Certainty Adjusted Probability Estimate
Programmatic Access to the European Central Bank's Statistical
Data Warehouse (SDW)
Programmatic Access to the European Central Bank's Statistical
Data Warehouse
Translate English Words into Chinese, or Translate Chinese Words
into English
Elliptic Distribution Based on Elliptic Curves
Elliptic Distribution and Lambda Option Pricing Model
Elliptic Lambda Distribution and Option Pricing Model
Functions for spatial point pattern analysis
Functions for Spatial Point Pattern Analysis
Create Interactive Graphs with 'Echarts JavaScript' Version 4
Create Interactive Graphs with 'Echarts JavaScript' Version 5
Minimal R/Shiny Interface to Library 'Echarts JavaScript'
Minimal R/Shiny Interface to Library 'ECharts JavaScript'
Minimal R/Shiny Interface to JavaScript Library 'ECharts'
The Echelon Analysis and the Detection of Spatial Clusters using
Echelon Scan Method
Finding Rhythms Using Extended Circadian Harmonic Oscillators
(ECHO)
Efficient calculation of fine structure isotope patterns via
Fourier transforms of simplex-based elemental models
Efficient Calculation of Fine Structure Isotope Patterns via
Fourier Transforms of Simplex-Based Elemental Models
Environment Based Clustering for Interpretable Predictive Models
in High Dimensional Data
Interface to the 'ECMWF' Data Web Services
Interface to 'ECMWF' and 'CDS' Data Web Services
eco: R Package for Fitting Bayesian Models of Ecological Inference in 2 by 2 Tables
R Package for Fitting Bayesian Models of Ecological Inference in 2 by 2 Tables
R Package for Fitting Bayesian Models of Ecological Inference in 2x2 Tables
R Package for Ecological Inference in 2x2 Tables
Graphical Modelling and Ordination using Copulas
Integrating Ecological Remote Sensing Data to Derive EBV Metrics
Integrating Ecosystem Remote Sensing Products to Derive EBV
Indicators
Work with Datasets in the Ecological Community Design Pattern
Tools to Create, Use, and Convert ecocomDP Data
Dissimilarity-based functions for ecological analysis
Dissimilarity-Based Functions for Ecological Analysis
Programmatic interface to the API serving UC Berkeley's Natural
History Data
Programmatic Interface to the API Serving UC Berkeley's Natural
History Data
Programmatic Interface to the Web Service Methods Provided by UC
Berkeley's Natural History Data
"A practical guide to ecological modelling - using R as a simulation platform"
"A practical guide to ecological modelling - using R as a
simulation platform"
"A Practical Guide to Ecological Modelling - Using R as a
Simulation Platform"
Coalescent-Based Simulation of Ecological Communities
Estimation of Parameter-Dependent Network Centrality Measures
Methods Used in the Economic Complexity Literature
Create Bipartite Networks Such as Countries and their Exported
Products
Computational Methods for Economic Complexity
Null Model Analysis for Ecological Networks
Power Estimates and Equivalence Testing for Multivariate Data
Ecological Regression using Aggregate and Individual Data
Ecological regression using aggregate and individual data
Conducts Analyses Informing Ecosystem Restoration Decisions
An R Interface to Brazilian Central Bank API and IPEA Data
An R Interface to Brazilian Central Bank and Sidra APIs and the
IPEA Data
Simulating Community Assembly and Ecological Diversification
Using Ecospace Frameworks
Code and Data Accompanying the Eco-Stats Text
Code and Data Accompanying the Eco-Stats Text (Warton 2022)
Statistical Scaling Functions for Ecological Systems
Procedures for Ecological Assessment of Surface Waters
Multiple Change Point Analysis of Multivariate Data
Nonparametric Multiple Change Point Analysis of Multivariate
Data
Nonparametric Multiple Change-Point Analysis of Multivariate
Data
Non-Parametric Multiple Change-Point Analysis of Multivariate
Data
Flexible Co-Data Learning for High-Dimensional Prediction
Quantitative Estimates of Small Ectotherm Temperature Regulation
Effectiveness
Estimate ED50 and Its Confidence Interval
Experimental Design and Analysis for Tree Improvement
Exploratory Data Analysis using Random Forests
Download School District Geospatial Data, Perform Spatial
Analysis, and Create Formatted Exportable Maps
Automated School District Data Download and Processing
Ecological Data Collection and Processing Package
Get Evaporative Demand Drought Index Raster Data
Exploratory and Descriptive Event-Based Data Analysis
Read Data from European Data Format (EDF and EDF+) Files
Platform for EDGAR Filing Management and Textual Analysis
Tool for the U.S. SEC EDGAR Retrieval and Parsing of Corporate
Filings
More powerful unconditional testing of negative binomial means
for Digital Gene Expression Data
More Powerful Unconditional Testing of Negative Binomial Means
for Digital Gene Expression Data
Algorithms for Bundling Edges in Networks and Visualizing Flow
and Metro Maps
Datasets that Support the EDGE Server DIY Logic
Bayesian Estimation of an Exploratory Deterministic Input, Noisy
and Gate Model
'RStudio' Addin for Editing a 'data.frame'
Convert readable linear (in)equalities into matrix form.
R package for parsing and manipulating edit rules
R package for parsing, applying, and manipulating data cleaning
rules
Parsing, Applying, and Manipulating Data Cleaning Rules
Toolbox for Error-Driven Learning Simulations with Two-Layer
Networks
R Integration for Edlib, the C/C++ Library for Exact Pairwise
Sequence Alignment using Edit (Levenshtein) Distance
Euclidean Distance Matrix Completion Tools
Empirical Differentially Methylated Regions Calculation
Empirical differentially methylated regions calculation
Provide tools for dimension reduction methods
Provides tools for dimension reduction methods
Provides Tools for Dimension Reduction Methods
Integrating R's debug() with Your Text Editor
Retrieve Records from the Urban Institute's Education Data
Portal API
Compute and Decompose Inequality in Education
Exploring Election and Census Highly Informative Data Nationally
for Australia
Robust Analytical Methods for Evaluating Educational
Interventions using Randomised Controlled Trials Designs
Tools for Pre-Processing Emission-Excitation-Matrix (EEM)
Tools for Pre-Processing Emission-Excitation-Matrix (EEM)
Fluorescence Data
EEMD Based Auto Regressive Integrated Moving Average Model
EEMD and Its Variant Based Time Delay Neural Network Model
Convenience functions for education data
Convenience Functions for Education Data
Simulate and Evaluate Time Series for Environmental Epidemiology
Modelling Framework for the Estimation of Salmonid Abundance
Implement European Forestry Dynamics Model
Simulate Forest Resources with the European Forestry Dynamics
Model
Efficient Least Squares for Total Causal Effects
Bayesian Effect Fusion for Categorical Predictors
Effect Displays for Linear and Generalized Linear Models
Effect Displays for Linear, Generalized Linear, Multinomial-Logit, and Proportional-Odds Logit Models
Effect Displays for Linear, Generalized Linear,
Multinomial-Logit, and Proportional-Odds Logit Models
Effect Displays for Linear, Generalized Linear,
Multinomial-Logit, Proportional-Odds Logit Models and
mixed-effects models
Effect Displays for Linear, Generalized Linear,
Multinomial-Logit, Proportional-Odds Logit Models and
Mixed-Effects Models
Effect Displays for Linear, Generalized Linear, and Other Models
Indices of Effect Size and Standardized Parameters
The Causal Effects for a Causal Loglinear Model
Efficient Fitting of Linear and Generalized Linear Models
High-Level Functions to Read and Write Ensemble Forecast Time
Series in netCDF
Extensions for 'ggplot2', to Align Plots, and Set Panel Sizes
Extensions for 'ggplot2': Custom Geom, Plot Alignment,
Symmetrised Scale, and Fixed Panel Size
Extensions for 'ggplot2': Custom Geom, Custom Themes, Plot
Alignment, Labelled Panels, Symmetric Scales, and Fixed Panel
Size
Hierarchical modelling of faecal egg counts
Hierarchical Modelling of Faecal Egg Counts
Estimation of Ego-Temporal Exponential Random Graph Models via
Expectation Maximization (EM)
Tool for ego-centric measures in Social Network Analysis
Import and Analyse Ego-Centered Network Data
Event History Analysis and Discrete Models
Enhanced Help to Enable "Docstring"-Comments in Users Functions
Real Datasets for Assessing Ecological Inference Algorithms
Compares Ecological Inference, Goodman, Rows by Columns
Estimates
eiPack: Ecological Inference and Higher-Dimension Data Management
eiPack: Ecological Inference and Higher-Dimension Data
Management
Ecological Inference and Higher-Dimension Data Management
Ecological Regression with Partial Identification
API Wrapper for 'US Energy Information Administration' Open Data
Generates (dense) matrices that have a given set of eigenvalues
Semiparametric factor and regression models for symmetric
relational data
Semiparametric Factor and Regression Models for Symmetric
Relational Data
Computes confidence intervals for principal components
Efficiently Impute Large Scale Incomplete Matrix
Effective Information and Causal Emergence
Access to RFR (Risk-Free Rate) Curves Produced by the EIOPA
Explanatory Item Response Modeling for Dichotomous and
Polytomous Items
An algorithm for reducing errors-in-variable bias in simple
linear regression
An Algorithm for Reducing Errors-in-Variable Bias in Simple
Linear Regression
Ecological Inference with individual and aggregate data
empirical likelihood ratio tests for means
A 'shiny' Application for Exploring Laboratory Data
Elastic Analysis of Sparse, Dense and Irregular Curves
Enhanced Least Absolute Shrinkage Operator
Enhanced Least Absolute Shrinkage and Selection Operator
Regression Model
Elastic Full Procrustes Means for Sparse and Irregular Planar
Curves
General Purpose Interface to Elasticsearch
General Purpose Interface to 'Elasticsearch'
Ising Network Estimation using Elastic Net and k-Fold
Cross-Validation
Elastic Net Regularization and Variable Selection
Elastic-Net for Sparse Estimation and Sparse PCA
A Lightweight Interface for Interacting with Elasticsearch from
R
Blazing Fast Morphological Analyzer Based on Kiwi(Korean
Intelligent Word Identifier)
Collection of Functions for Statistical Election Audits
Collection of functions for statistical election audits
Functions for election audits using stratified random samples
Estimation of Life Expectancies Using Multi-State Models
Ranked Voting Election Audits with Dirichlet-Trees
R Functions to Download and Clean Brazilian Electoral Data
Allocating Seats Methods and Party System Scores
A Shiny Application for Reducing Elemental LA-ICPMS Data from
Solid Structures
A Set of R6 Classes & a Shiny Application for Reducing Elemental
LA-ICPMS Data from Solid Structures
An Framework for Reducing Elemental LAICPMS Data from Solid
Structures
Load Associated Press Election Results with Elex
Kumaraswamy Complementary Weibull Geometric (Kw-CWG) Probability
Distribution
Ecological Limit Function Model Generation, Analysis, and
Visualization using 'ggplot2' and Statistical Methods
Ecological Limit Function Model Generation and Analysis Toolkit
Sampling from a Empirical Likelihood Bayesian Posterior of
Parameters Using Hamiltonian Monte Carlo
Equipment for Logarithmic and Linear Time Stepwise Multiple
Hypothesis Testing
Functions for drawing ellipses and ellipse-like confidence regions
Functions for drawing ellipses and ellipse-like confidence
regions
Functions for Drawing Ellipses and Ellipse-Like Confidence
Regions
Weierstrass and Jacobi Elliptic Functions
Implementation of ELM (Extreme Learning Machine ) algorithm for
SLFN ( Single Hidden Layer Feedforward Neural Networks )
Ranking Teams by Elo Rating and Comparable Methods
Entropy-Based Local Indicator of Spatial Association
Utilise Catastrophe Model Event Loss Table Outputs
A package for computing reading time measures for
psycholinguistics.
EM Algorithms for Estimating Item Response Theory Models
General Tools for Building GLM Expectation-Maximization Models
Ensemble Boolean Model Biomarker Analysis
Extra Recipes for Encoding Categorical Predictors
Tools to analyze the thermal reaction norm of embryo growth
Tools to Analyze the Thermal Reaction Norm of Embryo Growth
Global disaster losses from the EM-DAT database
Global Disaster Losses from the EMDAT database Using R
Global Disaster Losses from the EMDAT Database Using R
ecological models and data (book support)
Ecological models and data (book support)
Support Functions and Data for "Ecological Models and Data"
Estimating and Mapping Disaggregated Indicators
Exponentially Modified Gaussian (EMG) Distribution
Evaluation of Modeling without Information Leakage
Estimated Marginal Means, aka Least-Squares Means
Tools for Environmental and Ecological Survey Design
Eye Movement Analysis Package for Fixation and Saccade Detection
Evaluates the Empirical Characteristic Function for Multivariate
Samples
Empirical Probability Density Functions and Empirical Cumulative
Distribution Functions
Probability Distributions as Models of Data
Simulation-Based False Discovery Rate in RNA-Seq
Simulation-based False Discovery Rate in RNA-seq
empirical likelihood ratio for right censored data
empirical likelihood ratio for censored/truncated data
Empirical likelihood ratio for censored/truncated data
Empirical Likelihood Ratio for Censored/Truncated Data
Empirical-likelihood test (two-sample, censored data)
Empirical Likelihood Ratio Test for Two Samples with Censored
Data
Epimed Solutions Collection for Data Editing, Analysis, and
Benchmarking of Health Units
Epimed Solutions Collection for Data Editing, Analysis, and
Benchmark of Health Units
Fast Computing Euclidean Minimum Spanning Trees
Tools for Fast Computing and Plotting Euclidean Minimum Spanning
Trees
Interface to the Emu Speech Database System
Main Package of the EMU Speech Database Management System
An R package for analysis of multiple ChIP-seq data
An R package for the analysis of multiple ChIP-seq data
An R Package for the Analysis of Multiple ChIP-Seq Data
Tools for ecological network analysis (ena) in R
Tools for Ecological Network Analysis (ena)
Portable Tools for 'UTF-8' Character Data
Represent Ordered Lists and Pairs as Strings
Easily Encrypt and Decrypt Data Frame or Tibble Columns using
RSA Public/Private Keys
Easily Encrypt and Decrypt Data Frame/Tibble Columns or Files
using RSA Public/Private Keys
R Package for Fitting Multinomial Probit Models with Endogenous
Selection
Recursive Two-Stage Models to Address Endogeneity
endorse: R Package for Analyzing Endorsement Experiments
R Package for Analyzing Endorsement Experiments
Bayesian Measurement Models for Analyzing Endorsement
Experiments
E-statistics (energy statistics) tests of fit, clustering
E-statistics (energy statistics) tests of fit, independence, clustering
E-Statistics: Multivariate Inference via the Energy of Data
Data Published by the United States Federal Energy Regulatory
Commission
Robust and Sparse Methods for High Dimensional Linear and
Logistic Regression
Robust and Sparse Methods for High Dimensional Linear and Binary
and Multinomial Regression
English and European Soccer Results 1871-2016
Utilities to Extract and Analyse Text Data from the Emergency
Nutrition Network Forum
Ensemble Partial Least Squares (EnPLS) Regression
Ensemble Partial Least Squares Regression
Enrichment assessment of virtual screening approarches
Enrichment assessment of virtual screening approaches
Methods to Enrich R Objects with Extra Components
Probabilistic forecasting using Bayesian Model Averaging
Probabilistic Forecasting using Ensembles and Bayesian Model Averaging
Probabilistic Forecasting using Ensembles and Bayesian Model
Averaging
Ensemble Taxonomic Assignments of Amplicon Sequencing Data
Translate English Words into Chinese Words
Entropy partitioning to measure diversity
Entropy Partitioning to Measure Diversity
Entropy and Mutual Information Estimation
Estimation of Entropy, Mutual Information and Related Quantities
Miscellaneous Functions for Environmental Analyses
Various Utilities for Microbial Genomics and Metagenomics
Environmental Interpolation using Spatial Kernel Density
Estimation
GC-MS Data Analysis for Environmental Science
GC/LC-MS Data Analysis for Environmental Science
Isotope pattern, profile and centroid calculation.
Isotope pattern, profile and centroid calculation for mass
spectrometry.
Isotope Pattern, Profile and Centroid Calculation for Mass
Spectrometry
Peak picking for high resolution mass spectrometry data
Peak Picking for High Resolution Mass Spectrometry Data
Keep Track of User-Defined Environment Names
Methods for Identification of Outliers in Environmental Data
Configurable Reporting on your External Compute Environment
Data Management Package (Exposure and Occurrence Data in R)
Export or Import Graph and Tables to 'Microsoft' Office
Export or Graph and Tables to 'Microsoft' Office and Import
Figures and Tables
Statistical Functions for the Censored and Uncensored
Epanechnikov Distribution
Call 'EPANET' Functions to Simulate Pipe Networks
Simulating Populations of Ectotherms under Global Warming
Argentina's Permanent Household Survey Data and Manipulation
Utilities
Epistatic and penetrance models for two-locus genetic
interactions
Process Nanopore EPI2ME Output for Use in R
Functions for analysing epidemiological data
An R package for the analysis of epidemiological data
Tools for the Analysis of Epidemiological Data
Elementary Functions for Epidemiolical Analysis
Elementary Epidemiological Functions for a Graduate Epidemiology\Biostatistics Course
Elementary Epidemiological Functions for a Graduate
Epidemiology\Biostatistics Course
Elementary Epidemiological Functions for Epidemiology and
Biostatistics
Handling, Visualisation and Analysis of Epidemiological Contacts
Tools to Retrieve Economic Policy Institute Data Library
Extracts
Modeling of Epidemics using Hierarchical Bayesian Models
Flexible Modelling Functions for Epidemiological Data Analysis
Analysis and Simulation of Plant Disease Progress Curves
Predicting Disease Spread from Flow Data
Interface Package for the 'EpiGraphDB' Platform
Miscellaneous Tools for the 'R4Epis' Project
Functions and Data for "Epidemics: Models and Data in R"
Functions and Data for "Epidemics: Models and Data in R (2nd
Edition)"
A collection of epidemic/network-related tools
A Collection of Epidemic/Network-Related Tools
Epistatic Network Modelling with Forward-Time Simulation
Basic Sensitivity Analysis of Epidemiological Results
Estimation with Penalisation in Systems of Ordinary Differential
Equations
Density Estimation with Soft Information by Exponential
Epi-splines
Detecting Epistatic Selection with Partially Observed Genotype
Data
Flexible Contingency Tables for Epidemiology
Create HTML Tables in the Style Used in Epidemiological Papers
Small Helpers and Tricks for Epidemics Analysis
Early Detection of Public Health Threats from Twitter Data
A Toolkit for Using Whole Building Simulation Program
'EnergyPlus'
EPoC (Endogenous Perturbation analysis of Cancer)
Endogenous Perturbation Analysis of Cancer
Clinical Coding of Patients with Kidney Disease
Exact Post Selection Inference with Applications to the Lasso
Collect and Process Economic Policy Uncertainty Data
Create Future 'EnergyPlus' Weather Files using 'CMIP6' Data
Methods for Calculating 'EQ-5D' Utility Index Scores
Methods for Analysing 'EQ-5D' Data and Calculating 'EQ-5D' Index
Scores
Create an SVG-Based Mathematical Formula
EQS Output Conversion to lavaan Functions
Tools for analyzing eQTL experiments: A complementary to Karl Broman's 'qtl' package for genome-wide analysis
Tools for analyzing eQTL experiments: A complementary to Karl
Broman's 'qtl' package for genome-wide analysis
Estimate a Single or Multiple Graphical Models and Construct
Networks
Estimate Directed and Undirected Graphical Models and Construct
Networks
Estimate Graphical Models from Multiple Types of Datasets and
Construct Networks
Testing the Equality of Two Covariance Matrices
Examine Measurement Invariance via Equivalence Testing and
Projection Method
Traditional Methods for Test Score Equating
Statistical Methods for Test Score Equating
Direct, chain and average equating coefficients with standard
errors using IRT methods.
Direct, Chain and Average Equating Coefficients with Standard
Errors Using IRT Methods
Direct, Chain and Average Equating Coefficients with Standard
Errors Using IRT Methods.
Uniformly Most Powerful Invariant Tests of Equivalence
Provides tests and graphics for assessing tests of equivalence
Provides Tests and Graphics for Assessing Tests of Equivalence
Equivalence Test for the Means of Two Normal Distributions
Automated Spectral Deconvolution, Alignment, and Metabolite
Identification in GC/MS-Based Untargeted Metabolomics
Fitting Tails by the Empirical Residual Coefficient of Variation
Process Analysis for Exponential Random Graph Models
Fit, Simulate and Diagnose Exponential-Family Models for Networks
Fit, Simulate and Diagnose Exponential-Family Models for
Networks
Fit, Simulate and Diagnose Exponential-Family Models for
Networks with Count Edges
Fit, Simulate and Diagnose Exponential-Family Random Graph
Models to Egocentrically Sampled Network Data
ergm.graphlets: A Package for ERG Modeling Based on Graphlet
Properties
ERG Modeling Based on Graphlet Properties
Fit, Simulate and Diagnose Exponential-Family Models for
Multiple or Multilayer Networks
Fit, Simulate and Diagnose Exponential-Family Models for
Rank-Order Relational Data
User-specified terms for the statnet suite of packages
User-specified Terms for the statnet Suite of Packages
Local Health Department network data set
Exponential Random Graph Models for Small Networks
Check Arguments and Generate Readable Error Messages
Event-Related Potential (ERP) Data Exploration Made Easy
Event-related potentials (ERP) analysis, graphics and utility
functions
Exploratory Reduced Reparameterized Unified Model Estimation
Adaptive Enrichment Designs with Sample Size Re-Estimation
Estimate Number of Latent Factors and Factor Matrix for Factor
Analysis
Extended Empirical Saddlepoint Density Approximation
Extended Empirical Saddlepoint Density Approximations
Indicators of Electoral Systems and Party Systems
Effect Size Computation for Meta Analysis
Modular Approach to Dose Finding Clinical Trials
Data Preparation During and After the Use of the Experience
Sampling Methodology (ESM)
Easy Study of Patient DICOM Data in Oncology
Explore and Visualize Your Data Interactively
Joint Quantile and Expected Shortfall Regression
Download Data from the European Social Survey on the Fly
Efficient Stepwise Selection in Decomposable Models
Essential Functions not Included in Base R
Fundamentos De Estadistica Descriptiva e Inferencial
Tools for Assessing Estimability of Linear Predictions
Fast Estimators for Design-Based Inference
Estimation of Four-Fold Table Cell Frequencies (Raw Data) from
Effect Size Measures
Estimating the Sample Mean and Standard Deviation from Commonly
Reported Quantiles in Meta-Analysis
An Implementation of Parametric and Nonparametric Event Study
Visualization and Estimation of Effect Sizes
Forest Yield Tables for Northwest Germany and their Application
Estimation of an ETAS model. Mixed FLP (Forward Likelihood
Predictive) and ML estimation of non-parametric and parametric
components of the ETAS model for earthquake description.
Mixed FLP and ML Estimation of ETAS Space-Time Point Processes
Mixed FLP and ML Estimation of ETAS Space-Time Point Processes
for Earthquake Description
Interaction with the 'Ethereum' Blockchain
Extract-Transfer-Load Framework for Medium Data
Extract-Transform-Load Framework for Medium Data
Classification and Regression with Structured and Mixed-Type
Data
Computes Moments of Univariate Truncated t Distribution
Client for 'etcd', a 'Key-value' Database
Creates Safety Results Summary in XML to Upload to EudraCT, or
ClinicalTrials.gov
Creates Safety Results Summary in XML to Upload to EudraCT
eulerian: A package to find eulerian paths from graphs
Area-Proportional Euler and Venn Diagrams with Circles or
Ellipses
Area-Proportional Euler and Venn Diagrams with Ellipses
Makes it Easier to Work with Daily 'netCDF' from EURO-CORDEX
RCMs
Fast and Easy Eurostat Data Import and Search
Interact with Metadata Records and Media on the Europeana
Repository
R Interface to the Europe PubMed Central RESTful Web Service
Historical Populations of European Cities, 1500-1800
Extreme Value Analysis with Goodness-of-Fit Testing
Parsing and evaluation tools that provide more details than the
default.
Parsing and Evaluation Tools that Provide More Details than the
Default
Information Security Quantified Risk Assessment Toolkit
Functions for extreme value distributions
Functions for Extreme Value Distributions
Bayesian Analysis in Extreme Value Theory
Event Prediction for Time-to-Event Endpoints
Regression Models for Event History Outcomes
Streaming Events and their Early Classification
Generalised Additive Extreme Value Models
Evidential Analysis of Genetic Association Data
Analysis of Scientific Evidence Using Bayesian and Likelihood
Methods
Reporting Tools for Sensitivity Analysis of Evidence Factors in
Observational Studies
Evidence Factors in Observational Studies
Extreme Value Mixture Modelling and Threshold Estimation
Extreme Value Mixture Modelling, Threshold Estimation and
Boundary Corrected Kernel Density Estimation
Comparative and Population Genetic Analyses
Tools for Evolutionary Quantitative Genetics
Evolutionary Parameter Estimation for 'Repast Simphony' Models
Epigenetic Variable Outliers for Risk prediction Analysis
Mean of order p (MOP) and peaks over random threshold (PORT)
Hill estimates for the extreme value index (EVI)
Mean of order p, peaks over random threshold Hill and high
quantile estimates
Extreme Value Theory for Open Set Classification - GPD and GEV
Classifiers
Evolutionary Learning of Globally Optimal Trees
Extensible Differential Equations for Mosquito-Borne Pathogen
Modeling
Prior Distributions Using a Bayesian Hierarchical Framework
Exact Samples Sizes and Inference for Clinical Trials with
Binary Endpoint
Exact Conditional Tests and Confidence Intervals for 2x2 tables
Exact Tests and Confidence Intervals for 2x2 Tables
An Exact Method for Life Table Response Experiment (LTRE)
Analysis
Monte Carlo Exact Tests for Log-linear models
Exact Distributions for Rank and Permutation Tests
Exact P-values and Matching Confidence Intervals for simple
Discrete Parametric Cases
Exact P-Values and Matching Confidence Intervals for Simple
Discrete Parametric Cases
Fast Extraction from Raster Datasets using Polygons
Maximally selected statistics for binary response variables - Exact methods
Maximally selected statistics for binary response variables -
Exact methods
Help for Writing Tests Based on Function Examples
Help for Writing Unit Tests Based on Function Examples
Automatic Generation of Simple (Statistical) Exams
Automatic Generation of Standardized Exams for Large-Lecture Courses
Automatic Generation of Standardized Exams for Large-Lecture
Courses
Question Generation in the 'MyLearn' XML Format
Interface for 'exams' Exercises in 'learnr' Tutorials
Automatic Generation of Exams in R for 'Sakai'
Confidence Intervals for Exceedance Probability
Convenient way to work with data in Microsoft Excel
Convenient Data Exchange with Microsoft Excel
A Wrapper for 'Javascript' Library 'jExcel'
A Wrapper of the 'JavaScript' Library 'jExcel'
Streamline Data Import, Cleaning and Recoding from 'Excel'
Extracts Tabular Data from Excel Reports
Excerpt Structuring Comments from Your Code File and Set a Table
of Contents
Checks for Exclusion Criteria in Online Data
Functions that compute probabilistic excursion sets and contour
credibility regions for latent Gaussian random processes and
fields.
Excursion Sets and Contour Credibility Regions for Random Fields
Convert Gene EXPression Data to FBA FLUXes
An Exponential Stochastic Block Model for Interaction Lengths
Expanding Ploidy and Allele-Frequency on Nested Subpopulations
experiment: R package for designing and analyzing randomized experiments
experiment: R package for designing and analyzing randomized
experiments
R Package for Designing and Analyzing Randomized Experiments
Datasets Used in Social Science Experiments: A Hands-on
Introduction
Modeling without data using expert opinion
Exponential Integral and Incomplete Gamma Function
Interactive Interfaces for Results Exploration
A Tool for Large-Scale Exploratory Analyses
Calculate density dependent likelihood of a phylogenetic tree
Streamlined Export of Graphs and Data Tables
Multiple Effect Estimation of Chemicals in Environmental
Epidemiology
Spatial analysis of extra-pair paternity
Spatial Analysis of Extra-Pair Paternity
Computing Expectations and Marginal Likelihoods for Permutations
Rapid Implementation of Machine Learning Algorithms for Genomic
Data
Rapid Deployment of Machine Learning Algorithms
Data sets from "Forecasting with exponential smoothing"
Data Sets from "Forecasting with Exponential Smoothing"
Tables, Labels and Some Useful Functions from Spreadsheets and
'SPSS' Statistics
Some Useful Functions from Spreadsheets and 'SPSS' Statistics
Tables with Labels and Some Useful Functions from Spreadsheets
and 'SPSS' Statistics
Calculate Exposures, Assign Records to Intervals
Experience Study Tools for Analytics and Communications
Fast, Reliable and Elegant Reproducible Research
Convenience functions for botanist to create exsiccatae indices
Convenience Functions for Botanists to Create Specimens Indices
Extended RC Models for Contingency Tables
Summary Statistics for Geospatial Features
Estimate the lower extreme quantile with the censored Weibull
MLE and censored Weibull Mixture
Estimate Lower Extreme Quantile with the Censored Weibull MLE
and Censored Weibull Mixture
Data Manipulation Extension Based on 'Dplyr' and 'Tidyr'
Data Manipulation Extensions of 'Dplyr' and 'Tidyr'
Additional Families for Generalized Linear Models
Constructs the Exterior Match from Two Matched Control Groups
Maximum penalized likelihood estimation with extended lasso
penalty
Maximum Penalized Likelihood Estimation with Extended Lasso
Penalty
Extra-binomial approach for pooled sequencing data
Additional Univariate and Multivariate Distributions
Extremely Randomized Trees (ExtraTrees) method for
classification and regression
Extremely Randomized Trees (ExtraTrees) Method for
Classification and Regression
Categorical Data Visualization and Analysis
Categorical Data Analysis and Visualization
Package for holding the database for the extrafont package
Estimation and Additional Tools for Alternative Multivariate
Frailty Models
Estimation and Additional Tools for Alternative Shared Frailty
Models
Extra Binary Relational and Logical Operators
Astrobiology Equations Estimating Extraterrestrial Life
Forecast Verification for Extreme Events
Extreme Value Statistics and Quantile Estimation
Estimation of Extreme Conditional Quantiles and Probabilities
Outlier detection in onedimensional data
Estimation of Extreme Value Dependence for Time Series Data
Econometric Analysis of Explosive Time Series
Prepare/Analyse Eye Tracking Data for Reading
Organising and Analysing Eye-Tracking Data
Open Source Ophthalmic Data Sets Curated for R
Import Gaze Data for EyeLink Eye Tracker
Import ASC Files from EyeLink Eye Trackers
Easy analysis and visualization of factorial experiments.
Easy Analysis and Visualization of Factorial Experiments
Task Oriented Interface for Exploratory Data Analysis
Easy Interface to Effective Concentration Calculations
selects significant non-additive interaction between two
variables using fast GLM implementation.
Avoid the Typical Working Directory Pain When Using 'knitr'
Analysis of Enzyme Activities on Synthetic Substrates using
Michaelis-Menten Kinetics
Import Various Data File Types as a Rectangular Form Using a
File Picker Dialogue Box
Easy Data Import Using GUI File Picker and Seamless
Communication Between an Excel and R
Easy Use of R via Shiny App for Basic Analyses of Experimental
Data
provide an easy to use framework to conduct simulation
Summarise Data in the Quick and Easy Way
Generate Data Summarization in a Tidy Format
Rmetrics - Modelling ARMA Time Series Processes
Rmetrics - Assets Selection and Modelling
Rmetrics - Analysing and Modelling Financial Assets
Rmetrics - Marketes and Basic Statistics
Rmetrics - Bonds and Interest Rate Models
Financial Software Collection - fCalendar
Rmetrics - Chronological and Calendarical Objects
fCertificates - Basics of Certificates and Structured Products
Valuation
Basics of Certificates and Structured Products Valuation
Change Point Analysis in Functional Data
Rmetrics - Dependence Structures with Copulas
Rmetrics - Bivariate Dependence Structures with Copulae
Dynamic Model Averaging and Dynamic Model Selection for
Continuous Outcomes
Rmetrics - Pricing and Evaluating Exotic Option
fExpressCertificates - Structured Products Valuation for
ExpressCertificates/Autocallables
Structured Products Valuation for
ExpressCertificates/Autocallables
Financial Software Collection - fExtremes
Rmetrics - Extreme Financial Market Data
Rmetrics - Modelling Extreme Events in Finance
Rmetrics - Autoregressive Conditional Heteroskedastic Modelling
Fitting Hidden Markov Models to Financial Data
Classic, reloaded and adaptive FastICA algorithms
Classical, Reloaded and Adaptive FastICA Algorithms
Rmetrics - Economic and Financial Data Import
Rmetrics - Importing Economic and Financial Data
Scrubbing and Other Data Cleaning Routines for fMRI
Routines for Common fMRI Processing Tasks
Financial Software Collection - fMultivar
Rmetrics - Analysing and Modeling Multivariate Financial Return
Distributions
Rmetrics - Modeling of Multivariate Financial Return
Distributions
Nonlinear and Chaotic Time Series Modelling
Rmetrics - Nonlinear and Chaotic Time Series Modelling
Financial Software Collection - fPortfolio
Rmetrics - Portfolio Selection and Optimization
Rmetrics - Portfolio Selection and Optimization - ebook
available at www.rmetrics.org
Regression Based Decision and Prediction
Rmetrics - Regression Based Decision and Prediction
Social Relations Analyses with roles ("Family SRM")
Social Relations Analyses With Roles ("Family SRM")
Social Relations Analyses with Roles ("Family SRM")
Rmetrics - The Dynamical Process Behind Markets
Rmetrics - Financial Time Series Objects
Rmetrics - Trading and Rebalancing Financial Instruments
Rmetrics - Modelling Trends and Unit Roots
Overfitting Bayesian Mixtures of Factor Analyzers with
Parsimonious Covariance and Unknown Number of Components
Change Point Detection in High-Dimensional Time Series Networks
'ATAforecasting' Modelling Interface for 'fable' Framework
Core Tools for Packages in the 'fable' Framework
Create Easily Canvas in 'shiny' and 'RMarkdown' Documents
Fast Covariance Estimation for Sparse Functional Data
Access to Facebook API V2 via a Set of S4 Classes
Access to Facebook Ads via the 'Windsor.ai' API
Get Facebook Leads Ads Data via the 'Windsor.ai' API
A C++ Framework for Plant-Plant Interaction IBMs
Instrumental Variables Estimation for 2^k Factorial Experiments
Extract and Visualize the Results of Multivariate Data Analyses
Factorial Optimal Designs for Two-Colour cDNA Microarray
Experiments
Post-Processing MCMC Outputs of Bayesian Factor Analytic Models
Design and Analysis for Factorial Experiments
Hierarchical Algorithm for Post-Hoc Testing
Bayesian quantile regression factor models
Simultaneous Change-Point and Factor Analysis
Design and Analysis of 2x2 Factorial Trial
Design and Analysis of a 2x2 Factorial Trial
Factor Model Estimation Using Proxy Variables
Graphical Presentation of Simple Contrasts
Bayesian Estimation of (Sparse) Latent Factor Stochastic
Volatility Models
thin wrapper for the Factual.com server API
File Abstraction Interface Layer (FAIL) mimicking a key-value
store
Fair Data Adaptation with Quantile Preservation
Flexible Tool for Bias Detection, Visualization, and Mitigation
Feature Annealed Independence Rules (demo)
Faisal Conjoint Model: A New Approach to Conjoint Analysis
Flexible Data Simulation Using the Multivariate Normal
Distribution
Simulates Data from a Data Frame of Different Variable Types
Fuzzy Adaptive Resonance Theory K-Means Clustering Technique
Finding Allele-specific Copy Number in Next-Generation
Sequencing Data
Finding Allele-Specific Copy Number in Next-Generation
Sequencing Data
Finding Allele-Specific Copy Number in Whole-Exome Sequencing
Data
Family Sequence Kernel Association Test for Rare and Common
Variants
Statistical Tests of Familial Hypotheses
End-to-End Automated Machine Learning and Model Evaluation
Penalized likelihood factor analysis via non-concave penalty
Penalized likelihood factor analysis via nonconvex penalty
Penalized Likelihood Factor Analysis via Nonconvex Penalty
Building Kriging models from FANOVA graphs
Building Kriging Models from FANOVA Graphs
Visualisations of sequential probability distributions.
Visualisation of sequential probability distributions using fan
charts.
Visualisation of Sequential Probability Distributions Using Fan
Charts
ANSI Control Sequence Aware String Functions
Influential case detection methods for factor analysis and SEM
Influential Case Detection Methods for Factor Analysis and
Structural Equation Models
Modelization for Functional AutoRegressive processes
Modelization for Functional AutoRegressive Processes
Functions and datasets for books by Julian Faraway.
Functions and Datasets for Books by Julian Faraway
Data and Code for Financial Accounting Research
Interactive Interface to Data Envelopment Analysis Modeling
Vectorised Colour Conversion and Comparison
High Performance Colour Space Manipulation
Fasano-Franceschini Test: A 2-D Kolmogorov-Smirnov Two-Sample
Test
Fasano-Franceschini Test: A Multidimensional Kolmogorov-Smirnov
Two-Sample Test
A Fast and Scalable Joint Estimator for Learning Multiple
Related Sparse Gaussian Graphical Models
Analyze, Summarize, and Visualize Daily Streamflow Data
Implementation of the Fourier Amplitute Sensitivity Test (FAST)
Implementation of the Fourier Amplitude Sensitivity Test (FAST)
Fast Differential Correlation Matrix Screening
Fast Creation of Dummy (Binary) Columns from Categorical
Variables
Fast Creation of Dummy (Binary) Columns and Rows from
Categorical Variables
Fast Rcpp implementation of Gauss-Hermite quadrature
Fast 'Rcpp' Implementation of Gauss-Hermite Quadrature
Fast Drawing and Shading of Graphs of Statistical Distributions
Hierarchical Independent Component Analysis: a Multi-Scale
Sparse Non-Orthogonal Data-Driven Basis
Hierarchical Independent Component Analysis: a multi-scale
sparse non-orthogonal data-driven basis
The Elliptical Slice Sampler for Bayesian Horseshoe Regression
FastICA algorithms to perform ICA and Projection Pursuit
FastICA Algorithms to perform ICA and Projection Pursuit
FastICA Algorithms to Perform ICA and Projection Pursuit
Efficient Jonckheere-Terpstra Test Statistics for Robust Machine
Learning and Genome-Wide Association Studies
Fast Linear Step Up Procedure of Benjamini–Hochberg FDR Method
for Huge-Scale Testing Problems
A Fast Laplace Method for Spatial Generalized Linear Mixed Model
Fast Probabilistic Record Linkage with Missing Data
Fast Computation of Multivariate M-estimators
Fast Computation of Multivariate M-Estimators
Extremely Fast Implementation of a Naive Bayes Classifier
Foundations and Applications of Statistics Using R
Data sets and utilities for Foundations and Applications of
Statistics by R Pruim
Foundations and Applications of Statistics Using R (2nd Edition)
Sample Generalized Random Dot Product Graphs in Linear Time
Functions to Access Premier Hockey Federation and National
Hockey League Play by Play Data
Efficient Learning of Word Representations and Sentence
Classification
Fast Algorithms for Fitting Topic Models and Non-Negative Matrix
Factorizations to Count Data
Compute Maximal Overlap Discrete Wavelet Transform (MODWT) and À
Trous Discrete Wavelet Transform
Self-Tuning Data Adaptive Matrix Imputation
A fast solver for constrained l1 minimization approach to sparse
precision matrix estimation
A fast solver for parameterized lp problems and constrained l1
minimization approach to sparse precision matrix estimation
A Fast Solver for Parameterized Linear Programming Problems and
Constrained L1 Minimization Approach to Sparse Precision Matrix
Estimation
A Fast Solver for Parameterized LP Problems, Constrained L1
Minimization Approach to Sparse Precision Matrix Estimation and
Dantzig Selector
Fast hierarchical clustering routines for R and Python
Fast Hierarchical Clustering Routines for R and Python
Fast Hierarchical Clustering Routines for R and 'Python'
Significant Interval Discovery with Categorical Covariates
Fine-Gray Regression via Forward-Backward Scan
Lasso and elastic-net penalized Cox's regression in high
dimensions models using the cocktail algorithm
Lasso and Elastic-Net Penalized Cox's Regression in High
Dimensions Models using the Cocktail Algorithm
Fast, Low Memory-Footprint Digests of R Objects
Raster Image Processing and Vector Recognition
Raster Images Processing and Vector Recognition
Fast and Stable Fitting of Generalized Linear Models using
'RcppEigen'
Fast Label-Dissimilarity Discordance Estimation with H+
Faster K-Medoids Clustering Algorithms: FastPAM, FastCLARA,
FastCLARANS
A Fast Way to Calculate the p-Value of One or Multiple
Log-Rank-Tests
Fast Marching Method for Modelling Evolving Boundaries
Fast Implementation of a Key-Value Store
Fast Computation of some Matrices Useful in Statistics
Fast Mutual Information Based Independence Test
Finds the Critical Sequential Point of Stability for a Pearson
Correlation
Faster Generation of Quantile Quantile Plots with Large Samples
Backtest Investment Strategies with 3 Lines of Code
Time-Saving Package for Creating Reports
'fastText' Wrapper for Text Classification and Word
Representation
Fast Utility Function for Time Parsing and Conversion
A Suite of High-Performance Packages for Statistics and Data
Manipulation
Two-locus Family-based Association Test with Polytomic Outcome
Two-locus Family-based Association Test with Polytomous Outcome
Two-Locus Family-Based Association Test with Polytomic Outcome
Two-Locus Family-Based Association Test with Polytomous Outcome
Find the URL to the 'Favicon' for a Website
Analyzing and Managing Facebook Ads from R
Association Football (Soccer) Ranking via Poisson Regression
An Extensible Approach to Flux Balance Analysis
Gene by Environment Interaction and Conditional Gene Tests for Nuclear Families
Gene by Environment Interaction and Conditional Gene Tests for
Nuclear Families
Fast Algorithms to Bootstrap Receiver Operating Characteristics
Curves
The Full Bayesian Significance Test and the e-Value
The Full Bayesian Evidence Test, Full Bayesian Significance Test
and the e-value
The Full Bayesian Evidence Test, Full Bayesian Significance Test
and the e-Value
Standard Evaluation-Based Multivariate Function Composition
Floating Catchment Area (FCA) Methods to Calculate Spatial
Accessibility
Inference of Fuzzy Cognitive Maps (FCMs)
Functional Concurrent Regression for Sparse Data
FCROS for detecting differentially expressed genes
FCROS to search for differentially expressed genes and to detect
recurrent chromosomal copy number aberrations.
A Method to Search for Differentially Expressed Genes and to
Detect Recurrent Chromosomal Copy Number Aberrations
Analysis of Variance for Univariate and Multivariate Functional
Data
The fda.usc package: summary information
Functional Data Analysis and Utilities for Statistical Computing
(fda.usc)
Functional Data Analisis and Utilities for Statistical Computing
(fda.usc)
Functional Data Analysis and Utilities for Statistical Computing
Autocorrelation Function for Functional Time Series
Functional data analysis in a mixed model framework
Functional Data Analysis in a Mixed Model Framework
Model-Based Clustering for Functional Data with Covariates
Regression with Partial Differential Regularizations, using the
Finite Element Method
Functional Data Analysis and Partial Differential Equations;
Statistical Analysis of Functional and Spatial Data, Based on
Regression with Partial Differential Regularizations
Functional Data Analysis and Partial Differential Equations
(PDE); Statistical Analysis of Functional and Spatial Data,
Based on Regression with PDE Regularization
Statistical Analysis of Functional and Spatial Data, Based on
Regression with PDE Regularization
Functional Data Analysis and Partial Differential Equations;
Statistical Analysis of Functional and Spatial Data, Based on
Regression with Partial Differential Equation Regularization
Partially Observed Integrated Functional Depth
Joint Clustering and Alignment of Functional Data
Concurrent Regression and History Index Models for Functional
Data
Functional Data Analysis for Density Functions by Transformation
to a Hilbert Space
Clustering and alignment of a functional dataset
Functional Data Analysis: K-Mean Alignment
Outlier Detection Tools for Functional Data Analysis
Functional Data Analysis and Empirical Dynamics
Interval Testing Procedure for functional data
Interval Testing Procedure for Functional Data
Fast Implementation of the Diffusion Decision Model
Functions for calculating fractal dimension.
Data Mining and R Programming for Beginners
False Discovery Rate Procedure Under Discrete Null Distributions
False Discovery Rate Procedures Under Discrete and Heterogeneous
Null Distributions
Permutation-based FDR Point and Confidence Interval Estimation
Permutation-Based FDR Point and Confidence Interval Estimation
Estimation and Control of (Local) False Discovery Rates
Estimation of (Local) False Discovery Rates and Higher Criticism
Frequency Distribution Tables, Histograms and Poligons
Frequency Distribution Tables, Histograms and Polygons
Classification and Feature Selection for microRNA/mRNA
Interactions
Feature Extraction And Statistics for Time Series
Feature Extraction and Statistics for Time Series
Feature significance for multivariate kernel density estimation
Local Inferential Feature Significance for Multivariate Kernel
Density Estimation
Measurement Level Independent Feature Correlation Matrix
Turn Features On and Off using Feature Flags
Feature Extraction for Discretely-Sampled Functional Data
Interact with the 'Python' Module 'Featuretools'
Some Helper Functions that Help Create Features from Data
Free Brazilian Repository for Open Soil Data
Data Package for the 2016 United States Federal Elections
Fechnerian Scaling of Discrete Object Sets
Client package for the U.S. Federal Register API
Client Package for the U.S. Federal Register API
Fast, Flexible, and User-Friendly Record Linkage Methods
Text Analysis of the US Code of Federal Regulations
Unofficial API for Fedstat (EMISS) for Automatic and Efficient
Data Queries
Unofficial API for Fedstat (Rosstat EMISS System) for Automatic
and Efficient Data Queries
Estimating Fixed Effects Individual Slope Models
Functional Help for Functions, Objects, and Packages
Estimation and Fit Assessment of Frailty Exponential Random
Graph Models
Facilitate Exploration of touRR optimisatioN
Get Data from Google Analytics via the 'Windsor.ai' API
Get Data from Salesforce via the 'Windsor.ai' API
memory-efficient storage of large atomic vectors and arrays on disk and fast access functions
memory-efficient storage of large atomic vectors and arrays on
disk and fast access functions
memory-efficient storage of large data on disk and fast access
functions
Memory-Efficient Storage of Large Data on Disk and Fast Access
Functions
Basic statistical functions for package ff
Basic Statistical Functions for Package 'ff'
Stress Test Historical Scenarios with Fully Flexible
Probabilities
Fully Flexible Probabilities for Stress Testing and Portfolio
Construction
API Client for Fantasy Football League Platforms
Forgetting Factor Methods for Change Detection in Streaming Data
Fast FFT and DCT Based on the FFTW Library
Wrapper for 'FFTW3' Includes: One-Dimensional, Two-Dimensional,
Three-Dimensional, and Multivariate Transforms
Wrapper for fftw3: includes 1-D, univariate and multivariate,
and 2-D transform
Wrapper for FFTW3: Includes 1-D, Univariate and Multivariate,
and 2-D Transform
Wrapper for 'FFTW3' Includes: One-Dimensional Univariate,
One-Dimensional Multivariate, and Two-Dimensional Transform
Utilities for Fundamental Geo-Spatial Data
Access Small ForestGEO Datasets For Examples
Using 'FastGit' to Accelerate the Access to 'GitHub'
A Feasible Generalized Least Squares Estimator for Regression
Analysis of Outcomes with Network Dependence
Partial Separability and Functional Gaussian Graphical Models
Focused Information Criteria for Model Comparison
Bayesian Multinomial Logistic Normal Regression
A Lightweight and Flexible Web Framework
A collection of miscellaneous functions.
A Biostatisticians Toolbox for Various Activities, Including
Plotting, Data Cleanup, and Data Analysis
Map Data to Visualize the Fifty U.S. States with Alaska and
Hawaii Insets
Check Validity of FIGI, CUSIP, ISIN, SEDOL
Easily Arrange External Figures with Patchwork Alongside
'ggplot2' Figures
Support for a Variety of Figure Production Tasks
Transform Files to the 'microtable' Object with 'microeco'
Package
Transform Files to 'microtable' Object with 'microeco' Package
File-Backed Array for Out-of-Memory Computation
Wrapper for the Filebin File Sharing API
File-Backed Matrix Class with Convenient Read and Write Access
Chunk Processing or Split-Apply-Combine on Delimited Files(CSV
Etc)
Chunk Processing or Split-Apply-Combine on Delimited Files and
Distributed Dataframes
Effective File Navigation from the R Console
Matrix Completion, Imputation, and Inpainting Methods
Get started easily with FilterView from R.
Quickly Create Elegant Regression Results Tables and Plots when
Modelling
Interface for the 'Finnish Biodiversity Information Facility'
API
Find Pattern in Files of All Branches of a 'git' Repository
Find R Scripts, R Markdown, PDF and Text Files by Content with
Pattern Matching
Find Code Snippets, R Scripts, R Markdown, PDF and Text Files
with Pattern Matching
Python tools to find an acceptable python binary
Python Tools to Find an Acceptable Python Binary
Functions to Find an Acceptable Python Binary
A View Generator for Multidimensional Data
Approximate fine balance when exact fine balance is not
achievable
Functions to operate on binary fingerprint data
Functions for Processing Binary Fingerprint Data
Functions to Operate on Binary Fingerprint Data
Produce Charts that you See on the Fingertips Website
Computation of the probability of ruin within a finite time
horizon
Computation of the Probability of Ruin Within a Finite Time
Horizon
Test for Finiteness of Moments in a Distribution
Microsoft Finance Time Series Forecasting Framework
Financial Data from U.S. Securities and Exchange Commission
Access to Average Purchase Price of Vehicles in Brazil
Lightweight Federal Information Processing System (FIPS) Code
Information Retrieval
Induced Priors in Bayesian Mixture Models
Integrates 'Google Firebase' Authentication Method with 'Shiny'
Integrates 'Google Firebase' Authentication Storage, and
'Analytics' with 'Shiny'
Prediction of Wildland Fire Behavior and Hazard
Fits Poisson-sum-of-Gammas GLMs, Tweedie GLMs, and delta
log-normal mdoels.
Fits Poisson-Sum-of-Gammas GLMs, Tweedie GLMs, and Delta
Log-Normal Models
A Small Collection of Fish Population Datasets
Transform Base Maps Using Log-Azimuthal Projection
Fisheye and Hyperbolic-space-alike Interactive Visualization
Tools in R
Dataset of Measurements of Fish Species at Kirkkojarvi Lake,
Finland
Mean and Covariance Matrix Estimation under Heavy Tails
Modeling Over Dispersed Binomial Outcome Data Using BMD and ABD
Genotype Calling for Bi-Allelic Marker Assays
fitTetra is an R package for assigning tetraploid genotype
scores
Help to fit of a parametric distribution to non-censored or censored data
Help to fit of a parametric distribution to non-censored or
censored data
Help to Fit of a Parametric Distribution to Non-Censored or
Censored Data
Finite Mixture Model Fitting of Lifespan Datasets
Tools for Ordinary Differential Equations Model Fitting
Classes for Fitness Landscapes and Seascapes
Fit Hundreds of Theoretical Distributions to Empirical Data
Data and Code Behind the Stories and Interactives at
'FiveThirtyEight'
The Distribution of Distances Between Discrete Events in Fixed
Time
Fixed Income Models, Calculations, Data Structures and
Instruments
An R Client for the "Fixer.io" Currency API
Feature-Based Landscape Analysis of Continuous and Constraint
Optimization Problems
Feature-Based Landscape Analysis of Continuous and Constrained
Optimization Problems
Highlight, Annotate, and Format your R Source Code
Fits Piecewise Constant Models with Data-Adaptive Knots
Functional Latent Data Models for Clustering Heterogeneous
Curves ('FLaMingos')
Implementation of optimal hierarchical clustering
Shed Light on Black Box Machine Learning Models
Create Flashcards of Terms and Definitions
Indices and Tests for Assessing the Flatness of (Rank)
Histograms
Transforms Contingency Tables to Data Frames, and Analyses Them
Obtaining a Flat Table from Pivot Tables
Tools for Working with XML Files as R Dataframes
Smoother Change Tracking and Versioning for R Packages
Flexible crossing hazards in the Cox model
Flexible Parametric Models for Censored and Truncated Data
R Markdown Format for Flexible Dashboards
Flexible Latent Trait Metrics using the Filtered Monotonic
Polynomial Item Response Model
Finite Mixture Modeling of Generalized Nonlinear Models
Breaks Single Page Applications from 'flexdashboard' in Multiple
Files
Flexible parametric survival and multi-state models
Flexible Parametric Survival and Multi-State Models
Download Flight and Airport Data from Brazil
Flexible and Interpretable Non-Parametric Tests of
Exchangeability
Parses Code, Creates Partial Code Builds, Delivers Code Movie
A Wrapper of JavaScript Library 'flipdown.js'
Implement a Countdown in 'RMarkdown' Documents and 'shiny'
Applications
Flexible Inference via Permutations in R
Robust Score Testing in GLMs, by Sign-Flip Contributions
Convert Files to and from Binary Objects (BLOBs)
Process Synchronization Using File Locks
Statistical Methods for the (Regional) Analysis of Flood
Frequency
flora: taxonomical information on flowering species that occur
in Brazil
tools for interacting with the Brazilian Flora Checklist
Tools for Interacting with the Brazilian Flora Checklist
Tools for Interacting with the Brazilian Flora 2020
View and Browse Code Using Flow Diagrams
Cytometric Diversity Indices from 'FlowJo' Workspaces
Cytometric Diversity Indices from Gated Data
Tracing Information Flow for Inter-Software Comparisons in Mass
Spectrometry-Based Bottom-Up Proteomics
Tools for characterizing flowering traits
Forecasts future values of a univariate time series.
Streamlining Design and Deployment of Complex Workflows
Path algorithm for the general Fused Lasso Signal Approximator
Path Algorithm for the General Fused Lasso Signal Approximator
Baseline of mortality free of influenza epidemics
Estimate Insect Survival from Fluorescence Data
Flux rate calculation from dynamic closed chamber measurements
Flux Rate Calculation from Dynamic Closed Chamber Measurements
Data sets from "Forecasting: methods and applications" by
Makridakis, Wheelwright & Hyndman (1998)
Data Sets from "Forecasting: Methods and Applications" by
Makridakis, Wheelwright & Hyndman (1998)
Tools of Heterogeneity Pursuit via Finite Mixture Effects Model
Fast Class Noise Detector with Multi-Factor-Based Learning
Fast Multivariate Log-Concave Density Estimation
R Access to the 'FMP Cloud' and 'Financial Modeling Prep' API
Functional MRI Quality Assurance Routines
Variable Selection in Finite Mixture of AFT Regression and FMR
Functions for medical statistics book with some demographic data
Functions for Medical Statistics Book with some Demographic Data
Variance estimation of FMT method (Fully Moderated t-statistic)
Variance Estimation of FMT Method (Fully Moderated T-Statistic)
Summarizes CRAN Check Results in the Terminal
Summarize CRAN Check Results in the Terminal
Fit Continuous-Time State-Space Models for Filtering Argos
Satellite (and Other) Telemetry Data
Fit Continuous-Time State-Space and Latent Variable Models for
Filtering Argos Satellite (and Other) Telemetry Data and
Estimating Movement Behaviour
Fit Continuous-Time State-Space and Latent Variable Models for
Quality Control of Argos Satellite (and Other) Telemetry Data
and for Estimating Movement Behaviour
A Self-Describing Dataset Format and Interface
Creates and Manages Folder Functions for Portable Large-Scale R
Analysis
Datasets for Teaching Archaeology and Paleontology
Add Extra 'Fomantic UI' Components to 'shiny.semantic'
Fonts with 'Bitstream Vera Fonts' License
Additional 'ggplot2' Themes Using 'Hind' Fonts
Additional 'ggplot2' Themes Using 'M+' Fonts
Computer Modern font for use with extrafont package
Food Network Inference and Visualization
visualisation and analysis of food web networks
Fitting Bayesian and MLE Football Models
Penalties in the German Men's Football Bundesliga
Field Observation Quick Analysis Toolkit
Foraminiferal Image Analysis and Test Measurement
Foraminifera and Community Ecology Analyses
Tools for Working with Categorical Variables (Factors)
Systems Insights from Generation of Hydroclimatic Timeseries
Provides Foreach Looping Construct for R
Forecasting functions for time series and linear models
Forecasting Functions for Time Series and Linear Models
Convenient Functions for Ensemble Time Series Forecasts
Time Series Forecasting with Machine Learning Methods
Forecasting for Stationary and Non-Stationary Time Series
Floating-Point Genetic Algorithms with Statistical Forecast
Based Inheritance Operator
Read data stored by Minitab, SAS, SPSS, ...
Read data stored by Minitab, SAS, SPSS, Stata, ...
Read data stored by Minitab, S, SAS, SPSS, Stata, ...
Read Data Stored by Minitab, S, SAS, SPSS, Stata, Systat, ...
Read Data Stored by Minitab, S, SAS, SPSS, Stata, Systat, dBase, ...
Read Data Stored by Minitab, S, SAS, SPSS, Stata, Systat, dBase,
...
Read Data Stored by Minitab, S, SAS, SPSS, Stata, Systat, Weka,
dBase, ...
Read Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata',
'Systat', 'Weka', 'dBase', ...
Statistical Methods in Forensic Genetics
Statistical tools for the interpretation of forensic DNA
mixtures
Computing Essential Biodiversity Variables from Global Forest
Change Data
Approximate False Positive Rate Control in Selection Frequency
for Random Forest
A Unified Framework for Random Forest Prediction Error
Estimation
Visualizes Random Forests with Feature Contributions
Forest Health Evaluation System at the Forest Stand Level in
China
Implements the Forest-R.K. Algorithm for Classification Problems
Forest Spatial Structure Analysis Systems
Methods and Data for Forest Ecology Model Fitting and Assessment
Fitting and Assessing Neighborhood Models of the Effect of
Interspecific Competition on the Growth of Trees
Design-Based Global and Small-Area Estimations for Multiphase
Forest Inventories
Functions for Forest Mensuration and Management
Advanced Forest Plot Using 'grid' Graphics
Ecosystem and Canopy Structural Complexity Metrics from LiDAR
Projecting Customer Retention Based on Fader and Hardie
Probability Models
R functions for handling multiple processes.
Formatting Tools for 'rmarkdown' Documents
Tools for working with formulas, expressions, calls and other R
objects
Utilities for working with formulas, expressions, calls and
other R objects
Utilities for Formulas, Expressions, Calls and Other Objects
Programmatic Utilities for Manipulating Formulas, Expressions,
Calls, Assignments and Other R Objects
Dynamic Generation and Quality Checks of Formula Objects
Add Formula Interfaces to Modelling Functions
Forensic Pedigree Analysis and Relatedness Inference
Outlier Diagnostics for Some Linear Effects and Linear Mixed
Effects Models
Palaeoecological and Palaeogeographical Analysis Tools
Automated Cleaning of Fossil Occurrence Data
Bayesian 4 Parameter Item Response Model
Reliable Comparison of Floating Point Numbers
Fixed point clusters, clusterwise regression and discriminant plots
Fixed point clusters, clusterwise regression and discriminant
plots
Restricted MLE for Functional Principal Components Analysis
Predictive Confidence Bands for Functional Time Series
Forecasting
Automatic Distribution Graphs Using Formulas
Segmentation using Optimal Partitioning and Function Pruning
Weighted Segmentation using Functional Pruning and Optimal
Partioning
Computing the noncentrality parameter of the noncentral F
distribution
Data sets for the "Forecasting: principles and practice"
workshop by Rob J Hyndman, June 2011
Data for "Forecasting: principles and practice"
Data for "Forecasting: Principles and Practice" (2nd Ed)
Data for "Forecasting: Principles and Practice" (2nd Edition)
Data for "Forecasting: Principles and Practice" (3rd Edition)
Approximation of first-passage-time densities for diffusion
processes.
Approximation of First-Passage-Time Densities for Diffusion
Processes
Floristic Quality Assessment Tools for R
Fractionally differenced ARIMA (p,d,q) models
Fractionally differenced ARIMA aka ARFIMA(p,d,q) models
Fractionally Differenced ARIMA aka ARFIMA(P,d,q) Models
Numerical CDFs for Fractional Unit Root and Cointegration Tests
Fraction Proliferation via a quiescent growth model
Fraction Proliferation via a Quiescent Growth Model
Estimation of Fractal Dimension of a Black Area in 2D and 3D
(Slices) Images
Insightful Fractal Time Series Modeling and Analysis
Fractal Time Series Modeling and Analysis
A Fractal Time Series Modeling and Analysis Package
Performs Fractal Analysis and Fractal Regression
Generate fractal time series with non-normal returns
distribution
Assessing and Visualizing Fragility of Clinical Results with
Binary Outcomes
Fitting Frailty Models with the EM Algorithm
Frailty Models via Hierarchical Likelihood
General Semiparametric Shared Frailty Model
Frailty models using maximum penalized likelihood estimation
General Frailty Models: Shared, Joint and Nested Frailty Models
with Prediction
General Frailty models using a semi_parametrical penalized
likelihood estimation or a parametrical estimation
General Frailty models using a semi_parametric penalized
likelihood estimation or a parametric estimation
General Frailty models using a semiparametric penalized
likelihood estimation or a parametric estimation
General Frailty models: shared, joint and nested frailty models
with prediction
General Frailty Models: Shared, Joint and Nested Frailty Models
with Prediction; Evaluation of Failure-Time Surrogate Endpoints
Shared, Joint (Generalized) Frailty Models; Surrogate Endpoints
Simulation of the Growth of Framboidal and Sunflower Pyrite
Automatic Data Processing and Visualization for FRAP
Implementation of the "Flexible kernels for RBF network"
algorithm
Fuzzy Rule-based Systems for Classification and Regression Tasks
Fuzzy Rule-Based Systems for Classification and Regression Tasks
Statistical Analysis for Random Objects and Non-Euclidean Data
Estimation and Inference for High Dimensional Mediation and
Surrogate Analysis
Algorithms for Implementing Free-Knot Splines
Statistical algorithm used in common data mining course
Statistical algorithms used in common data mining course
Read 'FreeSurfer' Neuroimaging File Formats
Read and Write 'FreeSurfer' Neuroimaging File Formats
Deterministic Computation of Text Box Metrics
Generate Open or Closed Interpolating Curves
Download Data Sets from Kenneth's French Finance Data Library
Site
Frequency Moving Average Plots (MAP) of Multinomial Data by a
Continuous Covariate
Automated Cumulative Frequency Plots for Grouped Distribution
Frequency Domain Analysis for Multivariate Time Series
Frequency Domain Based Analysis: Dynamic PCA
Functional Time Series: Dynamic Functional Principal Components
Estimates Allele Frequency on qPCR DeltaDeltaCq from Bulk
Samples
Make Quick Descriptive Tables for Categorical Variables
Create Frequency Tables with Counts and Rates
Spectral Decomposition of Connectedness Measures
Implementation of Frequent-Directions Algorithm for Efficient
Matrix Sketching
Screened Selection Design with Survival Endpoints
Create Custom 'Bootstrap' Themes to Use in 'Shiny'
Read and Write Frictionless Data Packages
The Entire Transcript from Friends in Tidy Format
Utilities for the Forest Research Institute of the State
Baden-Wuerttemberg
Regression analysis of fractional responses
Regression Analysis of Fractional Responses
Regression Analysis of Fractional Responses Under Unobserved
Heterogeneity
Regression Analysis of Panel Fractional Responses
Financial Risk Management and Quantitative Analysis
The Generalized Hyperbolic Distribution, Related Distributions
and Their Applications in Finance
Prediction of Minimum Temperature for Frost Forecasting in
Agriculture
Functions for Calculating Fit-Robustness of CNA-Solutions
Evaluation Tools for Assessing Climate Adaptation of Fruit Tree
Species
Cross-Platform File System Operations Based on 'libuv'
Feature Selection for Multivariate Time Series
Managing and Visualizing Brain Surface Data
Automated Feature Selection from 'caret'
Robust Data Analysis Through Monitoring and Dynamic
Visualization
Import and Analysis of OMR Data from FormScanner
Wrapper functions for FSL (FMRIB Software Library) from
Functional MRI. of the Brain (FMRIB)
Wrapper functions for FSL (FMRIB Software Library) from
Functional MRI of the Brain (FMRIB)
Wrapper Functions for FSL (FMRIB Software Library) from
Functional MRI of the Brain (FMRIB)
Wrapper Functions for FSL ('FMRIB' Software Library) from
Functional MRI of the Brain ('FMRIB')
Wrapper Functions for 'FSL' ('FMRIB' Software Library) from
Functional MRI of the Brain ('FMRIB')
Rosenthal's Fail Safe Number and Related Functions
Estimating the Number of Factors in EFA with Out-of-Sample
Prediction Errors
Fused Sparse Structural Equation Models to Jointly Infer Gene
Regulatory Network
Lightning Fast Serialization of Data Frames for R
Lightning Fast Serialization of Data Frames
Genetic Distance Segmentation for Population Genetics
A Wrapper for the API of the Danish Parliament
Fault Tree Analysis Based on Proxel Simulation
Features and Strings for Nonparametric Regression
Feature Extraction from Biological Sequences
R interface to tslib (a time series library in c++)
R Interface to 'tslib' (a Time Series Library in C++)
Spectral Density Estimation and Comparison for Functional Time
Series
Framework for Unified Estimation in Lognormal Models
FUzzy GEnetic, a machine learning algorithm to construct
prediction model based on fuzzy logic.
Sensitivity Analysis Optimized for Matched Sets of Varied Sizes
Plot Full ROC Curves using Eyewitness Lineup Data
Full Text of 'Scholarly' Articles Across Many Data Sources
Clustering in the Discriminative Functional Subspace
Gaussian Process Models for Scalar and Functional Inputs
Model-based clustering in group-specific functional subspaces
Univariate and Multivariate Model-Based Clustering in
Group-Specific Functional Subspaces
Model-Based Co-Clustering of Functional Data
Learning Data Cleaning, Visual Analysis and Model Performance
Title: Learn Data Science Through the "Data Science Live Book"
Learn Data Science Through the "Data Science Live Book"
Exploratory Data Analysis and Data Preparation Tool-Box Book
Exploratory Data Analysis and Data Preparation Tool-Box
Fungal Species Identification using DNA Barcode with Random
Forest
Clean and Visualize Over Expression Results from
'ConsensusPathDB'
Convenience Functions by Michael Chirico
Functional Clustering of Redundant Components of a System
Curry, Compose, and other higher-order functions
Easy Computation of Alpha Functional Diversity Indices
Easy Computation of Functional Diversity Indices
Functional Ensemble Survival Tree for Dynamic Prediction
Fungible Coefficients and Monte Carlo Functions
Psychometric Functions from the Waller Lab
Generating Funky Heatmaps for Data Frames
Functional Mediation for a Distal Outcome
Time-Based Joins to Analyze Sequences of Events
Simple Utility Providing Terminal Access to all R Functions
funreg (Functional Regression for Irregularly Timed Data)
Functional Regression for Irregularly Timed Data
Furniture for Health, Behavioral, and Social Scientists
Furniture for Applied Quantitative Researchers
Apply Mapping Functions in Parallel using Futures
Block Splitting Algorithm for Estimation with Fused Penalty
Functions
Fused Lasso for High-Dimensional Regression over Groups
Embedding 'FusionCharts Javascript' Library in R
Clustering and Feature Screening using L1 Fusion Penalty
Futile library to provide some polymorphism
Futile library to provide some polymorphic operations
A Tiny Utility Providing Polymorphic Operations
Random matrix generation and manipulation
Random Matrix Generation and Manipulation
A framework for working in a functional programming paradigm in
R
Interim Analysis of Operational Futility in Randomized Trials
with Time-to-Event Endpoints and Fixed Follow-Up
Unified Parallel and Distributed Processing in R for Everyone
A Future API for Parallel and Distributed Processing using
BatchJobs
Apply Function to Elements in Parallel using Futures
A Future API for Parallel and Distributed Processing using
'batchtools'
A Future API for Parallel Processing using 'callr'
Find, Characterize, and Explore Heat Waves in Climate
Projections
Find, Characterize, and Explore Extreme Events in Climate
Projections
Exact calculation of fuzzy decision rules for multiple testing
Fuzzy numbers and the main mathematical operations
Fuzzy Rank Tests and Confidence Intervals
Fuzzy Similarity in Species Distributions
Join Tables Together on Inexact Matching
Forward search for Mokken scale analysis
Fire Weather Index System and Fire Behaviour Prediction System
Calculations
Fast Wild Cluster Bootstrap Inference for Linear Models
Fast Wild Cluster Bootstrap Inference for Linear Regression
Models
Find and Fill Gaps in Metabolic Networks
Visualize Genomic Mutation Data Using an Interactive Lollipop
Diagram
Interactively Visualize Genomic Mutation Data using a
Lollipop-Diagram
Interactively Visualize Genetic Mutation Data using a
Lollipop-Diagram
Graph-based two-sample tests for categorical data
Graph-Based Two-Sample Tests for Categorical Data
Generalized Iterative Proportional Fitting for Relational Models
A Generalized Joint Location and Scale Framework for Association
Testing
Likelihood Ratio Test for Genome-Wide Association under Genetic
Heterogeneity
Genome-Wide Association and Linkage Analysis under Heterogeneity
A graphical approach to sequentially rejective multiple test
procedures
Graph Based Multiple Comparison Procedures
Lightweight Graph Based Multiple Comparison Procedures
'2D plots of linear or integer programming models'
'2D and 3D plots of linear mathematical programming models'
Tools for 2D and 3D Plots of Single and Multi-Objective
Linear/Integer Programming Models
Batch Effect Detection via Guided Principal Components Analysis
Bootstrap goodness-of-fit test for the generalized Pareto
distribution
Efficient selection of undirected graphical models for
high-dimensional datasets
Efficient Selection of Undirected Graphical Models for
High-Dimensional Datasets
gRbase - a package for graphical modelling in R
Inference in Graphical Gaussian Models with Edge and Vertex Symmetries
Inference in Graphical Gaussian Models with Edge and Vertex
Symmetries
Semi-Supervised Generalized Structural Equation Modelling
Semi-Supervised Generalized Structural Equation Modeling
Graph-Based Sequential Change-Point Detection for Streaming Data
Generalized Weighted Quantile Sum Regression
Generalized Weighted Quantile Sum Regression Random Subset
gWidgets API for building toolkit-independent, interactive GUIs
gWidgets API for Building Toolkit-Independent, Interactive GUIs
Rewrite of gWidgets API for simplified GUI construction
Rewrite of gWidgets API for Simplified GUI Construction
Implementation of gWidgets2 for RGtk2 package
Implementation of gWidgets2 for the RGtk2 Package
Toolkit implementation of gWidgets2 for tcltk package
Toolkit Implementation of gWidgets2 for tcltk
Toolkit implementation of gWidgets for RGtk2
Toolkit Implementation of gWidgets for RGtk2
Toolkit implementation of gWidgets for www
Toolkit implementation of gWidgets API for use with web pages
Toolkit implementation of the gWidgets API for use with web
pages
Toolkit implementation of gWidgets for rJava
Toolkit implementation of gWidgets for tcltk pacakge
Toolkit implementation of gWidgets for tcltk package
Gadget is the Globally-Applicable Area Disaggregated General
Ecosystem Toolbox
Genetic and Isotopic Assignment Accounting for Habitat
Suitability
Machine Learning-Based Analysis of Potential Power Gain from
Passive Device Installation on Wind Turbine Generators
Biodiversity Data from the Living Atlas Community
Genetic Algorithms for Multivariate Statistical Models from
Large-Scale Functional Genomics Data
Collection of Packages for Internet Marketing
Genetic algorithms and C-steps based LTS estimation
Genetic algorithms and C-steps based LTS (Least Trimmed Squares)
estimation
Genetic Algorithms and C-Steps Based LTS (Least Trimmed Squares)
Estimation
Interface to Galvanize 'Highbond' Internal Audit Software
Generalized Additive Models for Bivariate Conditional Dependence
Structures and Vine Copulas
Genetic Approach to Maximize Clustering Criterion
Fit the GamBin model to species abundance distributions
Fit the GamBin Model to Species Abundance Distributions
Fit the Gambin Model to Species Abundance Distributions
One-Dimensional Random Walks Through Simulation of the Gambler's
Ruin Problem
Estimating multistate models using gamboost()
Functions and data for a course on modern regression and
classification
Functions and Data for a Course on Modern Regression and
Classification
Palettes Inspired in the TV Show "Game of Thrones"
Statistical Estimation of Game-Theoretic Models
Genetic Algorithm for Sequential Symmetric Games
Generalized Additive Models for Location Scale and Shape.
Generalised Additive Models for Location Scale and Shape.
Generalised Additive Models for Location Scale and Shape
Extra Additive Terms for Generalized Additive Models for
Location Scale and Shape
Fitting interval response variabble using gamlss.family distributions
Fitting an interval response variable using gamlss.family distributions
Fitting an interval response variable using gamlss.family
distributions
Fitting an Interval Response Variable Using gamlss.family
Distributions
Fitting an Interval Response Variable Using `gamlss.family'
Distributions
Generating and Fitting K-Inflated 'discrete gamlss.family'
Distributions
Data for Generalised Additive Models for Location Scale and
Shape
Extra distributions to be used for GAMLSS modelling.
Distributions to be used for GAMLSS modelling.
Distributions To Be Used For GAMLSS Modelling
Distributions to be Used for GAMLSS Modelling
Distributions for Generalized Additive Models for Location Scale
and Shape
Parallel Computations for Distributional Regression
Plotting Generalised Additive Model for Location, Scale and
Shape
Fitting Mixed (Inflated and Adjusted) Distributions
Extra Lasso-Type Additive Terms for GAMLSS
A GAMLSS add on package for fitting mixtute distributions
A GAMLSS add on package for fitting mixture distributions
A GAMLSS Add-on Package For Fitting Mixture Distributions
Fitting Mixture Distributions with GAMLSS
A GAMLSS add on package for fitting non linear parametric models
Fitting non linear parametric GAMLSS models
Spatial Terms in Generalized Additive Models for Location Scale
and Shape Models
A GAMLSS add on package for generating and fitting truncated (gamlss.family) distributions
Generating and fitting truncated (gamlss.family) distributions
Generating and Fitting Truncated `gamlss.family' Distributions
Bimodal Skew Symmetric Normal Distribution
Generalized additive mixed models using mgcv and lme4
Generalized Additive Mixed Models using 'mgcv' and 'lme4'
Comparing Nonlinear Curves and Surface Estimations by
Semiparametric Methods
Generalized additive mixed model analysis via slice sampling
Generalized Additive Mixed Model Analysis via Slice Sampling
Dose Rate Estimation from in-Situ Gamma-Ray Spectrometry
Measurements
Robust and Sparse Regression via Gamma-Divergence
Fit Regularization Path for Generalized Additive Models
Bayesian Generalized Additive Model Selection
Create a Hierarchical, Categorical Data Model for a Data Source
Generate Generative Data for a Data Source
Genetic Algorithm optimization for real-valued problems
Genetic Algorithm optimization for real-based and
permutation-based problems
Functions for Drawing Gapped Cluster Heatmap with ggplot2
Drawing Gapped Cluster Heatmap with 'ggplot2'
The Tidymodels Extension for GARCH Models
The 'Tidymodels' Extension for GARCH Models
Fitting and Forecasting Gegenbauer ARMA Time Series Models
Generalized Array Arithmetic for Ragged Arrays with Named
Margins
Genetic Algorithm (GA) for Variable Selection from
High-Dimensional Data
Greenhouse Gas Flux Calculation from Chamber Measurements
Analyzing Gastric Emptying from MRI or Scintigraphy
Analyzing Gastric Emptying from MRI or 'Scintigraphy'
Genetic Data Manipulation (Quality Control, GRM and LD
Computations, PCA), Linear Mixed Models (AIREML Algorithm),
Association Testing
Genetic Data Manipulation (Quality Control, GRM and LD
Computations, PCA), Linear and Logistic Mixed Models (AIREML
Algorithm), Association Testing
Genetic Data Handling (QC, GRM, LD, PCA) & Linear Mixed Models
Flow/Mass Cytometry Gating via Spatial Kernel Density Estimation
Easily Gate or Select Points on a Scatter Plot
Lotka-Volterra Models for Gause's 'Struggle for Existence'
Difference measures for multivariate Gaussian probability
density functions
The Gaussian Covariate Method for Variable Selection
The Greatest Mathematician Since Antiquity
Bayesian Classification with High-dimensional Gaussian Profiles
Collection of functions for Gaussian quadrature
Collection of Functions for Gaussian Quadrature
Multi-Trait Dissimilarity with more Uniform Contributions
Gazepath Transforms Eye-Tracking Data into Fixations and
Saccades
Generalize Lambda Distribution and Generalized Bootstrapping
Utilities for processing Rd objects and files
Generalized Beta and Beta Prime Distributions
Gradient Boosted Regression Trees with Errors-in-Variables
Interface with General Bikeshare Feed Specification Files
Automated Boosted Regression Tree Modelling and Mapping Suite
Package for Generalized Birnbaum-Saunders Distributions
Inference of Ploidy from (Genotyping-by-Sequencing) GBS Data
Hyperparameter Search for Gradient Boosted Trees
Simulation of Real and Complex Numbers and Small Programming
Utilities
Utilities for Simulation, Plots, Quantile Functions and
Programming
Analyze and Interpolate Geostatistical Count Data using Gaussian
Copula
Analysis of Geostatistical Count Data using Gaussian Copulas
GPU/CPU Benchmarking in Debian-based systems
'GPU'/CPU Benchmarking in Debian-Based Systems
A generalized coordinate descent (GCD) algorithm for computing
the solution path of the hybrid Huberized support vector
machine (HHSVM) and its generalization.
LASSO and (adaptive) Elastic-Net penalized least squares,
logistic regression, HHSVM and squared hinge loss SVM using a
fast GCD algorithm
LASSO and Elastic Net (Adaptive) Penalized Least Squares,
Logistic Regression, HHSVM, Squared Hinge SVM and Expectile
Regression using a Fast GCD Algorithm
The (Adaptive) LASSO and Elastic Net Penalized Least Squares,
Logistic Regression, Hybrid Huberized Support Vector Machines,
Squared Hinge Loss Support Vector Machines and Expectile
Regression using a Fast Generalized Coordinate Descent
Algorithm
Compute a fuzzy rules or tree classifier from data
General class of models for recurrent event data
Provides an Inequation Algorithm Function and a solution to
import DIMACS files.
Concord method for Graphical Model Selection
Wrappers for 'GDAL' Utilities Executables
Wrappers for the Geospatial Data Abstraction Library (GDAL)
Wrappers for the Geospatial Data Abstraction Library (GDAL)
Utilities
Earth Observation Data Cubes from Satellite Image Collections
Various R programming tools for data manipulation
Various R Programming Tools for Data Manipulation
Generalized Diffusion Magnetic Resonance Imaging
distances and routes on geographical grids
Distances and Routes on Geographical Grids
Functions for Generalized Dissimilarity Modeling
Tools to Work with Google DNS Over HTTPS API
Tools to Work with Google's 'DNS-over-HTTPS' ('DoH') 'API'
Tools to Work with Google's 'DNS'-over-'HTTPS' ('DoH') API
CoreArray Generic Data Structurs (GDS) R Interface
CoreArray Genomic Data Structure (GDS) R Interface
R Interface to CoreArray Genomic Data Structure (GDS) files
IO for GAMS GDX Files using 'data.table'
Geographical Ecology and Conservation Knowledge Online
Generalised Estimating Equations (GEE/WGEE) using 'Armadillo'
and S4
Bias-Corrected GEE for Cluster Randomized Trials
Solve Generalized Estimating Equations for Clustered Data
Marginal Proportional Hazards Mixture Cure Models with
Generalized Estimating Equations
Modified Variance Estimators for Generalized Estimating
Equations
Calculate generalized eigenvalues of a matrix pair
Calculate Generalized Eigenvalues of a Matrix Pair
Calculate Generalized Eigenvalues, the Generalized Schur
Decomposition and the Generalized Singular Value Decomposition
of a Matrix Pair
Calculate Generalized Eigenvalues, the Generalized Schur
Decomposition and the Generalized Singular Value Decomposition
of a Matrix Pair with Lapack
File Conversion for 'Gem Infrasound Logger'
Network Meta-Analysis Using Bayesian Methods
Generalized Two-Stage Designs for Phase II Single-Arm Studies
General Engine for Eco-Evolutionary Simulations
Analysis and Visualization Tools for Genetic Barcode Data
An implementation of the MOSS algorithm for the analysis of GWAS
data
Functions for the Bayesian analysis of GWAS data
Functions for the Bayesian Analysis of GWAS Data
Application of MOSS algorithm to genome-wide association study
(GWAS)
Predict Epidemic Curves with Generalized SEIR Modeling
R Shiny App for Creating Simplified Trial Summary (TS) Domain
Genetic Algorithm and Particle Swarm Optimization
Global ENvironmental ASsessment Information System (GENASIS)
computational tools
Gender: predict gender from names using historical data
Predict Gender from Names Using Historical Data
Predict Gender from Brazilian First Names
Client for the Genderize API That Determines the Gender of Names
Prediction of KEGG pathway membership for individual genes based on InterPro domain signatures
Prediction of KEGG pathway membership for individual genes based
on InterPro domain signatures
Simulate, model, and display data from a time-course microarray
experiment with periodic gene expression
Retrieves Gene Expression Dataset from GEO Code and Platform ID
Retrieves Gene Expression Dataset and Gene Symbols from GEO Code
Easily Downloads a Gene Expression Dataset from a GEO Code and
Retrieves the Gene Symbols of Its Probesets
Gene Haplotype Statistics, Phenotype Association and
Visualization
A Pipeline to Define Gene Families in Legumes and Beyond
Profiling a gene list into GOslim or KEGG function pie
Belief Propagation in Genotype-Phenotype Networks
Genome-Wide Association Study with SLOPE
Relevant Functions for Gene Expression Analysis, Especially in
Breast Cancer.
Genetic Epidemiology Design and Inference
Population Genetic Data Analysis Using Genepop
Generalized Correlations and Initial Causal Path
Generalized Correlations and Plausible Causal Paths
Generalized Correlations and Various Causal Paths
Generalized Correlations, Causal Paths and Portfolio Selection
Computes KS-Like Goodness-of-Fit Test Statistics
Hosmer-Lemeshow Test for Binary and Multinomial Logistic Models
Goodness of Fit Tests for Logistic Regression Models
Generate Data Containing Fake Personally Identifiable
Information
Common S3 Generics not Provided by Base R Methods Related to
Model Fitting
Estimate Gender from Names in Spanish and Portuguese
Get Gene Sets for Gene Enrichment Analysis
Statistical Tools for the Analysis of Multi Environment
Agronomic Trials
A New, Fast, and Outlier Resistant Hierarchical Clustering
Algorithm
Fast, Robust, and Outlier Resistant Hierarchical Clustering
Project GENIE BioPharma Collaborative Data Processing Pipeline
The Genie++ Hierarchical Clustering Algorithm with Noise Points
Detection
Fast and Robust Hierarchical Clustering with Noise Points
Detection
Easily Access Song Lyrics from Genius.com
Path algorithm for generalized lasso problems
Path Algorithm for Generalized Lasso Problems
Finding the DNA and Protein Sequences of Any Genomic or
Proteomic Loci
Plot publication-grade gene and genome maps
Plot Publication-Grade Gene and Genome Maps
Methods for Analysing Forensic Ancestry Informative Markers
Manages microsatellite projects.  Creates 96-well maps,
genotyping submission forms, rerun management, and import into
statistical software.
'Plot genome wide values for all chromosomes'
Models Dealing with Spatial Dependency in Genomic Data
Circular Genomic Permutation using GWAS p-values of association
Circular Genomic Permutation using Gwas p-Values of Association
Circular Genomic Permutation using Genome Wide Association
p-Values
Generalized PATHMOX Algorithm for PLS-PM, LS and LAD Regression
Generalized Pathmox Approach Segmentation Tree Analysis
Pathmox Approach Segmentation Tree Analysis
Power Calculations Under Genetic Model Misspecification
Generalized ridge trace plots for ridge regression
Generalized Ridge Trace Plots for Ridge Regression
Generates Data Sets for Class Demonstrations
Resampling Based Yield Stability Analyses
A Generalized Multiclass Support Vector Machine
An Imperative Library for Data Manipulation
Draw and Annotate Maps, Especially Charts of the North Atlantic
Analysis of geostatistical data using Bayes and Empirical Bayes
methods
Analysis of geostatistical data using Bayes and empirical Bayes
methods
Analysis of Geostatistical Data using Bayes and Empirical Bayes
Methods
Analysis and Modeling for Geostatistical Count Data
Kriging Method for Spatial Functional Data
Ordinary Functional Kriging Using Fourier Smoothing and Gaussian
Quadrature
Select Sparse Geoadditive Models for Spatial Prediction
Geocodes street or ip addresses and plots them on a map.
geoR - functions for geostatistical analysis
geoR - functions for geostatistical data analysis
Functions for geostatistical data analysis
geoRglm - a package for generalised linear spatial models
A Package for Generalised Linear Spatial Models
Classes and Methods for Working with Spectral Data with
Space-Time Attributes
Methods for Handling and Analyzing Time Series of Satellite
Images
Loads Shapefiles of Official Spatial Data Sets of Brazil
Download Official Spatial Data Sets of Brazil
Implementing Methods for Spatial Fuzzy Unsupervised
Classification
Stratified Heterogeneity Measure, Dominant Driving Force
Detection, Interaction Relationship Investigation
Fast, Dependency-Free Geodesic Distance Calculations
Methods for Calculating Gradient Surface Metrics
3D-Visualization of Geoelectric Resistivity Measurement Profiles
'ggplot2' Faceting Utilities for Geographical Data
Spatial prediction for function value data
Spatial Prediction for Function Value Data
Geomultistar Generator from American Community Survey (ACS)
Geodatabases
Turn Geospatial Polygons into Regular or Hexagonal Grids
Tools for Geohash Creation and Manipulation
Convert Data from and to 'geoJSON' or 'topoJSON'
Convert Data from and to 'GeoJSON' or 'TopoJSON'
Web-Processing of Large Gridded Datasets
Geographic Tools for Studying Gerrymandering
Data for topographic  and Geologic Mapping
Data for topographic and Geologic Mapping
Data for Topographic and Geologic Mapping
Easily Visualize Geographic Data of Morocco
Tools for Reading and Writing ISO/OGC Geographic Metadata
Generate and Modify Interoperable Geometric Shapes
Convert Between R Objects and Geometric Structures
Mesh Generation and Surface Tessellation
Network Visualization in the 'ggplot2' Framework
Geometric morphometric analysis of 2d/3d landmark data
Geometric morphometric analyses of 2d/3d landmark data
geometric morphometric analyses of 2d/3d landmark data
Geometric Morphometric Analyses of 2d/3D Landmark Data
Geometric Morphometric Analyses of 2D/3D Landmark Data
Multidimensional Queries Enriched with Geographic Data
Interface to www.geonames.org web service
Interface to the "Geonames" Spatial Query Web Service
Intensity Estimation on Geometric Networks with Penalized
Splines
'GeoJSON' Topology Calculations and Operations
Interface to the Geoparser.io API for Identifying and
Disambiguating Places Mentioned in Text
Geophysics, Continuum Mechanics, Mogi Model
Geophysics, Continuum Mechanics, Mogi Models, Gravity
Geophysics, Continuum Mechanics, Gravity Modeling
Robust Geostatistical Analysis of Spatial Data
Open Source Geometry Engine ('GEOS') R API
Construction of Geostatistical Sampling Designs
Smallest Enclosing Disc for Latitude and Longitude Points
Helper package to facilitate the generation of distance matrices
used in the package spacom.
Facilitate Generating of Distance Matrices Used in Package
'spacom' and Plotting Data on Maps
Spatial geostatistics; some geostatistical and radial basis
functions, prediction and cross validation; design of optimal
spatial sampling networks based on geostatistical modelling
Geostatistical Analysis and Design of Optimal Spatial Sampling
Networks
Spatio-Temporal; Inverse Distance Weighting and Radial Basis
Functions with Distance-Based Regression
Spatio-Temporal Radial Basis Functions with Distance-Based
Methods (Optimization, Prediction and Cross Validation)
An Introduction to Statistics for Geoscientists
Geostatistics using SpatialPoints and rasters
Geostatistical Modelling with Likelihood and Bayes
Tools to Improve the Use of Geostatistic
geotopbricks: Analyzes raster maps as input/output files from
the Hydrological Distributed Model GEOtop
An R Plug-in for the Distributed Hydrological Model GEOtop
Google Encoded Polyline Algorithm Format
Generalized Efficient Regression-Based Imputation with Latent
Processes
Seed Germination Indices and Curve Fitting
Generalized Structured Component Analysis (GSCA)
Reproducible Data Retrieval from the GESIS Data Archive
Hierarchical GxE Interactions in a Regularized Regression Model
Tools for Making and Combining Functions
Generalised Survival Trial Assessment Tool Environment
General Purpose G-Estimation for End of Study or Time-Varying
Outcomes
Download and Use CRU CL2.0 Climatology Data in R
Use and Explore CRU CL v. 2.0 Climatology Elements in R
Use and Explore 'CRU' 'CL' v. 2.0 Climatology Elements
Translating Coding Statements using get() and eval() for
Improved Run-Time Coding Efficiency
Import and Process Data from the 'Lattes' Curriculum Platform
Get Meteorological Data for Hydrological Modeling
Get Meteorological Data for Hydrologic Models
Access and Summarise World Health Organisation Tuberculosis data
Access and Summarise World Health Organization Tuberculosis Data
Fetching Tabular Data "Onload" in Compiled R Markdown HTML
Documents
Access to Ethereum-Based Blockchains Through Geth Nodes
Get Landsat 8 Data from Amazon Public Data Sets
Quantifying Systematic Heterogeneity in Meta-Analysis
Obtain a List of Publications from 'PubMed' and 'Google Scholar'
General-to-Specific (GETS) Modelling and Indicator Saturation
Methods
SPRE Statistics for Exploring Heterogeneity in Meta-Analysis
Getting to the Bottom, A Package for Learning Optimization
Methods
Learning Optimization and Machine Learning for Statistics
Tools for working with Hansen et al. 2013 Global Forest Change
dataset
Tools for Working with Hansen et al. Global Forest Change
Dataset
Generalized Fiducial Inference for Extremes
Generalized Fiducial Inference for Ultrahigh-Dimensional
Regression
Generalized Fiducial Inference for Low-Dimensional Linear
Regression
Generalized Fiducial Inference for Low-Dimensional Robust Linear
Regression
Generalized Fiducial Inference for Normal Linear Mixed Models
Generalized Fiducial Inference for Binary Logistic Regression
Models
Implements Group Fused Multinomial Regression
Offline 'Google' Fonts for 'Markdown' and 'Shiny'
Graph-Constrained Functional Pruning Optimal Partitioning
Mini Bubble Plots for Comparison of Discrete Data with 'ggplot2'
Compare Timing of Network Visualizations
Modern Graphs for Design of Experiments with 'ggplot2'
Exploratory Symbolic Data Analysis with 'ggplot2'
Collection of Functions and Layers to Enhance ggplot2
Add Marginal Histograms to 'ggplot2', and More 'ggplot2'
Enhancements
Plot Data on Oceanographic Maps using 'ggplot2'
'ggplot2' Based Tool to Facilitate Diagnostic Plots for NLME
Models
Quality Control Charts for the Grammar of Graphics Plotting
System
Compare Big Datasets to the Uniform Distribution
Creating and Plotting Data Objects for Understanding Random
Forests
Panels and Interactive Versions of Diagnostic Plots using
'ggplot2'
Time Series Visualisations Using the Grammar of Graphics
Extra Coordinate Systems, Geoms and Statistical Transformations
for 'ggplot2'
Extra Coordinate Systems, 'Geoms', Statistical Transformations,
Scales and Fonts for 'ggplot2'
Flexible Segment Geoms with Arrows for 'ggplot2'
Categorical Scatter (Violin Point) Plots
Wrappers to Make Beautiful 'ggplot2' Visualisation Simpler
Wrappers to Simplify Beautiful 'ggplot2' Visualisation
Wrappers to Simplify Pretty 'ggplot2' Visualisation
Wrappers to Simplify 'ggplot2' Visualisation
Create Images of Volumetric Brain Data in NIfTI Format Using
'ggplot2' Syntax
Combines Changepoint Analysis with 'ggplot2'
Shorten the Distance from Data Visualization Idea to Actual Plot
Implementation of Plots from Cleveland's Visualizing Data Book
Combination of GGplot2 plots into a matrix based on data
columns.
Simpler Appearance Modification of 'ggplot2'
Visualization of a Correlation Matrix using 'ggplot2'
Visualize Genome Coverage with Various Annotations
Analyze and Create Elegant Directed Acyclic Graphs
'ggplot2' Extension for Seasonal and Trading Day Adjustment with
'RJDemetra'
Tools for extracting dendrogram and tree diagram plot data for
use with ggplot.
Tools for extracting dendrogram and tree diagram plot data for
use with ggplot2
Create Dendrograms and Tree Diagrams Using 'ggplot2'
Interpretable Bivariate Density Visualization with ggplot2
Interpretable Bivariate Density Visualization with 'ggplot2'
Visualizations of Distributions and Uncertainty
A 'ggplot2' Extension for Plotting Unimodal Distributions
Dynamic Model of Choice with Parallel Computation, and C++
Capabilities
Interactive 'ggplot2' Layer and Theme Aesthetic Editor
Create Tidy Data Frames of Marginal Effects for 'ggplot' from
Model Outputs
Visualization Tools for Genealogical Data
Visualisation of High-Throughput Behavioural (i.e. Ethomics)
Data
Summarise a Distribution Through Coloured Intervals
Focus on Specific Factor Levels in your ggplot()
Scales that Focus Specific Levels in your ggplot()
Formula Interface to the Grammar of Graphics
Data Visualization Tools for Statistical Analysis Results
Streamlined Creation of Segments on the Y-Axis of 'ggplot2'
Plots
Capture the Spirit of Your 'ggplot2' Calls
Create a Half Normal Plot Using 'ggplot2'
Compose Half-Half Plots Using Your Favourite Geoms
Visualisation of Highest Density Regions in 'ggplot2'
A Fast 'ggplot2'-Based Implementation of Hilbert Curves
Graphics Layers for Plotting Image Data with 'ggplot2'
Visualise the Results of Inferential Statistics using 'ggplot2'
Explore the Innards of 'ggplot2' Objects
Data Visualization for IP Addresses and Networks
Make 'ggplot2' Graphics Interactive Using 'htmlwidgets'
Make Interactive 'ggplot2'. Extension to 'ggplot2' and 'ggiraph'
'ggplot2' Friendly Isotonic or Monotonic Regression Curves
Group Lasso Penalized Learning Using A Unified BMD Algorithm
Group Lasso Penalized Learning Using a Unified BMD Algorithm
Grammar of Graphics for Linear Model Diagnostic Plots
Plotting Lorenz Curve with the Blessing of 'ggplot2'
Functions and Datasets for Graphical Markov Models
Graphical Markov Models with Mixed Graphs
A package for spatial visualization with Google Maps and
OpenStreetMap
Spatial Visualization with Google Maps and OpenStreetMap
Plot Columns of Two Matrices Against Each Other Using 'ggplot2'
Graphical tools for analyzing Markov Chain Monte Carlo
simulations from Bayesian inference.
Tools for Analyzing MCMC Simulations from Bayesian Inference
Visualizations for 'mice' with 'ggplot2'
Variable Selection in Linear Mixed Models for SNP Data
Extract and Visualize Motif Information from MEME Software
Plot Multiple Sequence Alignment using 'ggplot2'
Create Muller Plots of Evolutionary Dynamics
Geometries to Plot Networks with 'ggplot2'
Multiple Fill and Color Scales in 'ggplot2'
Multiple Fill and Colour Scales in 'ggplot2'
A 'ggplot2' Extension to Make Normal Violin Plots
'Okabe-Ito' Scales for 'ggplot2' and 'ggraph'
Package Plot Layers for Easier Portability and Modularization
A 'ggplot2' and 'gganimate' Version of Pac-Man
Variations of Parallel Coordinate Plots for Categorical Data
'ggplot' Visualizations for the 'partykit' Package
Robust Image Rendering Support for 'ggplot2'
Parallel Coordinate Plots in the 'ggplot2' Framework
Easy Plotting of Periodic Data with 'ggplot2'
An implementation of the Grammar of Graphics in R
Multiple Summary Statistics for Binned Stats/Geometries
An implementation of the Grammar of Graphics
An Implementation of the Grammar of Graphics
Create Elegant Data Visualisations Using the Grammar of Graphics
'RStudio' Addin for Teaching and Learning 'ggplot2'
Create Ggplots via a Graphical User Interface
Convert Plot to 'grob' or 'ggplot' Object
Extra Convenience Functions for 'Plotly'
A Cross Between a 2D Density Plot and a Scatter Plot
A Small Collection of New Geometries, and Stats for 'ggplot2'
A Small Collection of Geometries, and Stats for 'ggplot2'
Visualizing Social Science Data with 'ggplot2'
Dots and Their Connections in Polar Coordinate System
Polygons with Holes for the Grammar of Graphics
A 'ggplot2' Extension Inspired by 'GraphPad Prism'
Annotate Statistical Tests for 'ggplot2'
Quickly Explore Your Data Using 'ggplot2' and Summary Tables
Quickly Explore Your Data Using 'ggplot2' and 'table1' Summary
Tables
An Implementation of Grammar of Graphics for Graphs and Networks
Allows Interactive Visualization of Data Through a Web Browser
GUI
Gaussian-Based Genome Representative Selector with
Prioritization
Draw Histograms and Restricted Cubic Splines (RCS)
Scales, Geometries, and Extensions of 'ggplot2' for Election
Mapping
Repulsive Text and Label Geoms for 'ggplot2'
Automatically Position Non-Overlapping Text Labels with
'ggplot2'
Scientific Journal and Sci-Fi Themed Color Palettes for
'ggplot2'
'stats' for Seasonal Adjustment on the Fly with 'ggplot2'
Tri-Surface Mesh Plots for Brain Atlases
A 'ggplot2' Extension for Drawing Publication-Ready Sequence
Logos
North Symbols and Scale Bars for Maps Created with 'ggplot2' or
'ggmap'
A 'ggplot2'-Plot of Composition of Solvency II SCR: SF and IM
New Data Visualisations for SOMs Cluster
New Data Visualisations for SOMs Networks
Extensions to 'ggplot2' for Radiation Spectra
Multiple Geometric Shape Point Layer for 'ggplot2'
Extension to 'ggplot2' for Plotting Stats
'ggplot2' Based Plots with Statistical Details
Continuous Confidence Interval Plots using t-Distribution
Explore complex data by embedding subplots within plots.
Offers Various Swiss Maps as ggplot2 Objects
Offers Various Swiss Maps as Data Frames and 'ggplot2' Objects
An extension to ggplot2, for the creation of ternary diagrams.
An Extension to 'ggplot2', for the Creation of Ternary Diagrams
Improved Text Rendering Support for 'ggplot2'
Extra themes, scales and geoms for ggplot
Extra Themes, Scales and Geoms for `ggplot2`
Extra Themes, Scales and Geoms for 'ggplot2'
Post-Process 'ggplot2' Plots with 'TikZ' Code Using Plot
Coordinates
Trace and Highlight Groups of Data Points
Add Trendline and Confidence Interval to 'ggplot'
Combination Matrix Axis for 'ggplot2' to Create 'UpSet' Plots
Voronoi Diagrams and Heatmaps with 'ggplot2'
A Natural Language Interface to 'ggplot2'
Functional Conditional Independence Testing with the GHCM
Provides a Lightweight Interface for 'GitHub' through R
A package on generalized hyperbolic distributions
A package on the generalized hyperbolic distribution and its special cases
A package on the generalized hyperbolic distribution and its
special cases
A Package on Generalized Hyperbolic Distribution and Its Special
Cases
Generalized Hyperbolic Distribution and Its Special Cases
Fit and Simulate Generalised Hypergeometric Ensembles of Graphs
The giRaph package for flexible graph representation in R
The giRaph package for graph representation in R
Naive Gibbs Sampling with Metropolis Steps
API Wrapper for GIE's AGSI+/ALSI+ Natural Gas Storage
Transparency Platform
Reads in Neuroimaging 'GIFTI' Files with Geometry Information
Reads in 'Neuroimaging' 'GIFTI' Files with Geometry Information
Take Shell Commands and Turn Them into R Functions
Group Inverse-Gamma Gamma Shrinkage for Sparse Regression with
Grouping Structure
Group Iterative Multiple Model Estimation
Supplemental Tools for the 'gimme' R Package
Gaussian Model Invariant by Permutation Symmetry
Download Geospatial Data from GISCO API - Eurostat
Download Map Data from GISCO API - Eurostat
Store and Retrieve Data.frames in a Git Repository
Turn Your Git Commit Messages into a HTML Book
Rstudio Addin for Version Control and Assignment Management
using Git
'Rstudio' Addin for Version Control and Assignment Management
using Git
An Easy Way to Install R Packages on GitHub
A Helpful Way to Install R Packages Hosted on GitHub
Create Useful .gitignore Files for your Project
Add 'Git' Links to Your Web Based Assets
Data Version Control for the Targets Package
Robust gridding and quantifying of pinned genetic screens
Robust and accurate quantification of pinned colony sizes in
microorganisms
an R package for quantification of pinned microbial culture
Quantification of Pinned Microbial Cultures
An R Package for Quantification of Pinned Microbial Culture
g-and-k and g-and-h Distribution Functions
Accessing the Official 'Google Knowledge Graph' API
Lasso Penalization in Large Scale Generalized Linear Array
Models
Penalization in Large Scale Generalized Linear Array Models
Generate tables and plots to get summaries of data
Generalized Linear Autoregressive Moving Average Models
Graphical Lasso: Estimation of Gaussian Graphical Models
Graphical lasso- estimation of Gaussian graphical models
High dimensional Sparse Gaussian Graphical Mixture Model
High dimensional Mixture Graph Models selection
General Linear Ballistic Accumulator Models
Latent Class Analysis with Group Variable
An R Package for Estimating a Group-Effect in Latent Class
Analysis
Estimating a Group-Effect in Latent Class Analysis
An R Package for Multiple-Group Latent Class Analysis
Calculate textures from grey-level co-occurrence matrices
(GLCMs) in R
Calculate Textures from Grey-Level Co-Occurrence Matrices
(GLCMs)
Basic functions for the generalised (Tukey) lambda distribution
Estimation and use of the generalised (Tukey) lambda distribution
Estimation and use of the generalised (Tukey) lambda
distribution
Estimation and Use of the Generalised (Tukey) Lambda
Distribution
An Asymmetry-Steepness Parameterization of the Generalized
Lambda Distribution.
Learning interactions via hierarchical group-lasso
regularization
Learning Interactions via Hierarchical Group-Lasso
Regularization
Phylogenetic Comparative Methods with Uncertainty Estimates
Generalized Linear Latent Variable Models
Distributed 'glm' for Big Data using 'ddR' API
'C' and 'Java' Source Code Generator for Fitted Glm Objects
Predicted Values and Discrete Changes for GLM
Bayesian Fractional Polynomials for GLMs
Adaptive LASSO and Network Regularized Generalized Linear Models
All Hierarchical Models for Generalized Linear Model
All Hierarchical or Graphical Models for Generalized Linear
Model
Fitting Generalized Linear Models Subject to Constraints
Discretization and Grouping for Logistic Regression
GLRT P-Values in Generalized Linear Models
Graph-Constrained Regularization for Sparse Generalized Linear
Models
Fit GLM with LEP-based penalized maximum likelihood
Fit GLM with LEP-Based Penalized Maximum Likelihood
Generalized Linear Mixed Models via Monte Carlo Likelihood
Approximation
Hierarchical Partitioning of Marginal R2 for Generalized
Mixed-Effect Models
Generalised Linear Mixed Models with WinBUGS
Generalised Linear Mixed Models and Spatial Models with BUGS
Generalised Linear Mixed Models and Spatial Models with WinBUGS,
BRugs, or OpenBUGS
Generalised Linear Mixed Models with BUGS and JAGS
Generalized Linear Mixed Model Analysis via Expectation
Propagation
Gauss-Seidel Generalized Linear Mixed Model solver
Variable selection for generalized linear mixed models by
L1-penalized estimation
Variable Selection for Generalized Linear Mixed Models by
L1-Penalized Estimation
Generalized linear models with random intercept
Generalized linear models with clustering
Generalized Linear Models with Clustering
High Dimensional Penalized Generalized Linear Mixed Models
(pGLMM)
General Linear Mixed Models for Gene-Level Differential
Expression
Generalized Linear Mixed Models using Template Model Builder
Bootstrap Resampling for Mixed Effects and Plain Models
Generalized Linear Mixed Models with Robust Random Fields for
Spatiotemporal Modeling
Specification of Generalised Linear Mixed Models
Lasso and elastic-net regularized generalized linear models
Lasso and Elastic-Net Regularized Generalized Linear Models
Add Nonparametric Bootstrap SE to 'glmnet' for Selected
Coefficients (No Shrinkage)
Fit a penalized constrained continuation ratio model for
predicting an ordinal response
Fit a Penalized Constrained Continuation Ratio Model for
Predicting an Ordinal Response
L1 Regularization Path for Generalized Linear Models
L1 Regularization Path for Generalized Linear Models and Cox Proportional Hazards Model
L1 Regularization Path for Generalized Linear Models and Cox
Proportional Hazards Model
Fit a penalized continuation ratio model for predicting an
ordinal response.
Fit a Penalized Continuation Ratio Model for Predicting an
Ordinal Response
Dimension Reduction of Non-Normally Distributed Data
Truncated Lasso Regularized Generalized Linear Models
Generalized Linear Models with Truncated Lasso Penalty
Set of Tools to Data Analysis using Generalized Linear Models
Transfer Learning with Regularized Generalized Linear Models
Transfer Learning under Regularized Generalized Linear Models
GLM model selection and multimodel inference made easy
Model selection and multimodel inference made easy
Model Selection and Multimodel Inference Made Easy
Variable Selection Deviation (VSD) Measures and Instability
Tests for High-dimensional Generalized Linear Models
Variable Selection Deviation Measures and Instability Tests for
High-Dimensional Generalized Linear Models
A Collection of Graphic Tools for GLM Diagnostics and some
Extensions
Global Gene-Set Analysis for Association Studies.
Inhomogeneous K- And Pair Correlation Functions Using Global
Estimators
Objective functions for benchmarking the performance of global
optimization algorithms
Testing the additional predictive value of high-dimensional data
Identify Global Objects in R Expressions
Download and Measure Global Trends Through Google Search Volumes
Plot 2D and 3D Views of the Earth, Including Major Coastline
Fitting and Testing Generalized Logistic Distributions
Language Mapping and Geospatial Analysis of Linguistic and
Cultural Data
Generalized Logrank Tests for Interval-censored Failure Time
Data
Glucose Variability Measures from Continuous Glucose Monitoring
Data
Methods to Assess Generalized Latent Variable Model Fit
Generate Musical Scores Easily and Show Them Anywhere
Generate Music Easily and Show Them Anywhere
Accessing a Geometallurgical Database with R
Wrapper and auxilliary functions for maps package to work with
grid graphics system.
Wrapper and auxilliary functions for maps package to work with grid graphics system.
Distance and Travel Time Between Two Points from Google Maps
Simulation of Graphically Constrained Matrices
Simulation of Graphical Correlation Matrices
Mediation Analysis for Multiple and Multi-Stage Mediators
Meta-Analysis via a Unified Framework of Confidence Distribution
Inference and Clustering of Functional Data
Gaussian Mixture Graphical Model Learning and Inference
Generalized Method of Moments and Generalized Empirical Likelihood
Generalized Method of Moments and Generalized Empirical
Likelihood
Multinomial Logit Models with Random Parameters
Various R programming tools for model fitting
Various R Programming Tools for Model Fitting
Multivariate Polynomials with Rational Coefficients
Interface between GMT 4.0 map-making software and R
Interface between GMT map-making software and R
Interface between GMT Map-Making Software and R
Interface Between GMT Map-Making Software and R
Estimate Gaussian Mixture Vector Autoregressive Model
Estimate Gaussian or Student's t Mixture Vector Autoregressive
Model
Estimate Gaussian and Student's t Mixture Vector Autoregressive
Models
Estimate Functional and Stochastic Parameters of Linear Models
with Correlated Residuals
Goodness of Fit Test for Continuous Distribution Functions
Generalized Non-negative Matrix Factorization based on Renyi
Divergence
Generalized Non-negative Matrix Factorization Based on Renyi
Divergence
Estimate Natural Mortality for Different Life Stages
read data from files readable by gnumeric
Read data from files readable by gnumeric
Read Data from Files Readable by Gnumeric
Read Data from Files Readable by 'gnumeric'
Weighted and lexicographical goal programming and optimization
Functions for Community Data and Ordinations
Model-diagnostics based on cumulative residuals
Model Diagnostics Based on Cumulative Residuals
Goodness of Fit Noise Analysis Using Monte Carlo Techniques
Fast DocumentTermMatrix and TermDocumentMatrix Creation
Goodness-of-Fit Measures for Categorical Response Models
Goodness-of-Fit Tests for Functional Data
Goodness-of-Fit Tests for the Gamma Distribution
Tests of fit for some probability distributions
Tests of Fit for some Probability Distributions
Classical Goodness-of-Fit Tests for Univariate Distributions
Generalized Orthogonal GARCH (GO-GARCH) models
Generalized Orthogonal GARCH (GO-GARCH) Models
Statistical Network Models for Dynamic Network Data
Gene Ontology Label Discernment and Identification
Goldilocks Adaptive Trial Designs for Time-to-Event Endpoints
A Framework for Robust Shiny Applications
Conducting Maximum Likelihood Estimation with Truncated
Mortality Data
Easy Authentication with Google OAuth2 APIs
Easy Authentication with Google OAuth2 API
R Scripts in the Google Cloud via Cloud Run, Cloud Build and
Cloud Scheduler
Access to 'Google Cloud Vision' API for Image Recognition, OCR
and Labeling
Access to the 'Google Cloud Vision' API for Image Recognition,
OCR and Labeling
Send Error Reports to the Google Error Reporting Service API
Call Google's 'Natural Language' API, 'Cloud Translation' API
and 'Cloud Speech' API
Call Google's 'Natural Language' API, 'Cloud Translation' API,
'Cloud Speech' API and 'Cloud Text-to-Speech' API
Encoding Coordinates into 'Google' Polylines
An R library to build Google's Public Data Explorer DSPL
Metadata files
Working with Google Public Data Explorer DSPL Metadata Files
Working with Google's 'Public Data Explorer' DSPL Metadata Files
R Interface for Google 'Cloud Pub/Sub' REST API
Access the 'Google Tag Manager' API using R
Using the Google Visualisation API with R
Interface between R and the Google Visualisation API
Interface between R and the Google Chart Tools
Access to Google Ads via the 'Windsor.ai' API
Access to 'Google Ads' via the 'Windsor.ai' API
R client library for communicating with the Google Bigquery
service
Collect Data Programmatically by POST Methods to Google Forms
An Interface to Google's Cloud Natural Language API
Access Google Sheets using the Sheets API V4
Retrieve Routes from Google Directions API and Decode Encoded
Polylines
Accesses Google Maps APIs to Retrieve Data and Plot Maps
Generalized Order-Restricted Information Criterion for Selecting
Order-Restricted (Multivariate) Linear Models
Evaluation of Inequality Constrained Hypotheses Using GORICA
Tools for Data Analysis in Experimental Agriculture
Scroll Back to Top Icon in R Markdown and Shiny
Scroll Back to Top Icon in 'rmarkdown' and 'shiny'
functions to get public survey data in Japan
Interface to API methods for government data.
General Profiling Method for Delay Differential Equation
Gaussian Process with Histogram Intersection Kernel
Comprehensive Statistical Analysis of Plant Breeding Experiments
Combining Tree-Boosting with Gaussian Process and Mixed Effects
Models
Generalized Pair Hidden Markov Chain Model for Sequence
Alignment
Lightweight Implementation for the Most Common Gaussian Process
Models
Implementation for the Most Common Gaussian Process Models
General Purpose Gaussian Process Modelling
Generalized partial linear models (GPLM)
Generalized Partial Linear Models (GPLM)
Various R programming tools for plotting data
Various R Programming Tools for Plotting Data
Classification using generalized partial least squares
Analysing and plotting genotype-phenotype maps
Analysing and Plotting Genotype-Phenotype Maps
Gaussian Processes for Poisson-noised Data
A Minimalistic package to apply Gaussian Process in R
Process GPX Files into R Data Structures
Prediction of G Quadruplexes and Other Non-B DNA Motifs
Graphviz Pipeline Plot Based on Grids (grPipe: Graphviz
Pipeline)
Stochastic Quasi-Gradient Differential Evolution Optimization
Probability of Detection for Grab Sample Selection
Provides functions for matching student-answers to teacher answers for a variety of data types.
Helps Grade Assignment Submissions that are R Scripts
Interactive Color Gradient Picker Using 'htmlwidgets' and the
Modified JS Script 'jquery-gradient-picker'
Easy Graphs for Data Visualisation and Linear Models for ANOVA
Moving-Window and Direct Data Aggregation
Landscape Connectivity, Habitat, and Protected Area Networks
Comprehensive Analysis of Nucleotide Conversion Sequencing Data
Inference on Granger-Causality in the Frequency Domain
Graphical Analysis of Variance Using ggplot2
Collection of Shiny Apps for Agricultural Research Data Analysis
graph: A package to handle graph data structures
A Wrapper of the JavaScript Library 'vis-graph3d'
Build Graphs for Landscape Genetics Analysis
Estimating and Displaying Population Attributable Fractions
An R Interface to the 'GraphHopper' Directions API
Statistical Methodology for Graphical Extreme Value Models
Graphical VAR for Experience Sampling Data
GRAPH Interaction from pathway Topological Environment
Additional Layout Algorithms for Network Visualizations
A Collection of Graphon Estimation Methods
Cluster Detection with Hypothesis Free Scan Statistic
Simulate Expression Data from 'igraph' Networks
Graphics Routines for Scientific Research
Generalized Regression Analysis and Spatial Prediction for R
Generalized Regression Analysis and Spatial Predictions for R
Graceful 'ggplot'-Based Graphics and Other Functions for GAMs
Fitted Using 'mgcv'
Generating Time Series with Diverse and Controllable
Characteristics
Perform Common Quantitative Tasks for Australian Analysts and to
Support Grattan Institute Analysis
Explore Probability Distributions for Bivariate Temporal
Granularities
A Compilation of Different Estimation Methods for Gravity Models
Gene Registration from Expression and Time-Courses in R
Classification of Spatial Patterns from Environmental Data
Through GRadient RECognition
GRadient-Based RECognition of Spatial Patterns in Environmental
Data
Gradient-Based Recognition of Spatial Patterns in Environmental
Data
Clustering and Model Selection with the Integrated
Classification Likelihood
Routines for Writing Greek Letters and Mathematical Symbols on
the 'RStudio' and 'RGui'
Calculates Sensitivities of Prices of Financial Options
Sensitivities of Prices of Financial Options
Sensitivities of Prices of Financial Options and Implied
Volatilites
Combine Categories Using Greenacre's Method
Backword compatibility package for gregmisc bundle
Estimation of Tail Dependence in Graphical Models
Mixed-Effects REML Incorporating Generalized Inverses
Adaptive Group-Regularized Logistic Elastic Net Regression
Simple and Scalable Statistical Modelling in R
Modelling Structured Dynamical Systems in 'greta'
Generalized Path Analysis for Social Networks
A Seamless Integration of 'Gretl' and 'R'
Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data
Toolbox for Model Selection and Combinations for the Forecasting
Purposes
Toolbox for Model Building and Forecasting
Fit a Grey-Zone Model with Survival Data
Miscellaneous Functions for "Grid" Graphics
Redraw Base Graphics Using grid Graphics
Redraw Base Graphics Using 'grid' Graphics
Approximate Optimal Transport Between Two-Dimensional Grids
Tools for Grid-Based Survey Sampling Design
A Simulation Tool to Determine the Required Sample Size for
Repertory Grid Studies
Improved Text Rendering Support for 'Grid' Graphics
Bayesian Inference for A|B and Bandit Marketing Tests
Genetic-Relationship-Matrix Structural Equation Modelling
(GRMSEM)
Creating Flexible, Reproducible 'PDF' Reports
Generalized Regression on Orthogonal Components
The package was developed to fit fit many growth curves obtained
under different conditions.
Gromov-Hausdorff Type Distances for Labeled Metric Spaces
Reproducible Scripts via Version-Specific Package Loading
The Simplest Solution to Version-Control for CRAN Packages
Version-Control for CRAN, GitHub, and GitLab Packages
Independent Component Analysis for Grouped Data
Regularized Multivariate Regression for Identifying Master
Predictors Using the GroupRemMap Penalty
Simulating and Modeling Group (Pooled) Testing Data
Grouped Weighted Quantile Sum Regression
Regression Analysis of Grouped and Coarse Data
Efficient Estimation of Grouped Survival Models Using the Exact
Likelihood Function
Efficient Estimation of Grouped Survival Models
Wavelet Functional ANOVA Through Markov Groves
Bayesian semiparametric growth curve models that additionally
include multiple membership random effects.
Bayesian semi and nonparametric growth curve models that
additionally include multiple membership random effects.
Bayesian Semi and Nonparametric Growth Curve Models that
Additionally Include Multiple Membership Random Effects
Bayesian non-parametric dependent models for time-indexed
functional data
Bayesian Non-Parametric Dependent Models for Time-Indexed
Functional Data
Multivariate Normal and Elliptically-Contoured Repeated
Measurements Models
Plotting, Smoothing and Growth Trait Extraction for Longitudinal
Data
Functional Analysis of Phenotypic Growth Data to Smooth and
Extract Traits
Data Cleaner for Anthropometric Measurements
Simple Metrics to Summarize Growth Curves
Bayesian reconstruction of growth velocity
Estimate Growth Rates from Experimental Data
Penalized Cox Model for High-Dimensional Data with Grouped
Predictors
Fitting user specified models with group lasso penalty
Fitting user specified models with Group Lasso penalty
Fitting User-Specified Models with Group Lasso Penalty
Standardization for Group Lasso Models with Categorical
Predictors
Concave 1-norm and 2-norm group penalty in linear and logistic
regression
Regularization paths for regression models with grouped covariates
Regularization paths for regression models with grouped
covariates
Regularization Paths for Regression Models with Grouped
Covariates
Penalized Regression Models with Overlapping Grouped Covariates
Group Sequential Analysis of Clinical Trials
Alternative Implementations of Base R Functions
Alternate Implementations of Base R Functions
River Hydrograph Separation and Analysis
Two functions for Generalized SARIMA time series simulation
Two Functions for Generalized SARIMA Time Series Simulation
Estimate Parameters in the Generalized SBM
Generalized Structure Component Analysis- Latent Class Analysis
Generalized Structure Component Analysis- Latent Class Analysis
& Latent Class Regression
Group Sequential Designs with Negative Binomial Outcomes
Group Sequential Design in Equivalence Studies
Download Google Sheets Using Just the URL
High Efficient Functions to Decode NFL Player IDs
Global Sea Level and Oxygen Isotope Data
Base Class and Methods for 'gson' Format
Genome Structure Rearrangement Calling in Genomes with High
Synteny
Group Sequential Refined Secondary Boundary
Copula Density and 2-D Hazard Estimation using Smoothing Splines
multivariable geostatistical modelling, prediction and simulation
uni- and multivariable geostatistical modelling, prediction and simulation
geostatistical modelling, prediction and simulation
spatial and spatio-temporal geostatistical modelling, prediction
and simulation
Spatial and Spatio-Temporal Geostatistical Modelling, Prediction
and Simulation
Spatial utility functions from the Dyer laboratory
Analyses and functions related to the spatial analysis of
genetic marker data.
Like gsub but with replacement function instead of string
Miscellaneous utilities for strings and function arguments.
Utilities for strings and function arguments.
Utilities for Strings and Function Arguments
Easily Create Presentation-Ready Display Tables
Generalizability Theory for Information Retrieval Evaluation
Extending 'gt' for Beautiful HTML Tables
Genome and Transcriptome Wide Association Study
Calculate efficiencies of group testing algorithms with
correlated responses
Estimating Public Transport Emissions from General Transit Feed
Specification (GTFS) Data
Converting Transport Data from GTFS Format to GPS-Like Records
Read and Write General Transit Feed Specification (GTFS) Files
Routing with GTFS (General Transit Feed Specification) Data
General Transit Feed Specification (GTFS) Editing and Analysing
Tools
Loadable and embeddable gtk device driver for R
Various functions to help manipulate data.
Game-Theoretically OPtimal (GTOP) Reconciliation Method
R Functions to Perform and Display Google Trends Queries
Perform and Display Google Trends Queries
Presentation-Ready Data Summary and Analytic Result Tables
Nombres Inscritos en Chile (1920 - 2019)
Nombres Inscritos en Chile (1920 - 2020)
Nombres Inscritos en Chile (1920 - 2021)
Access 'The Guardian' Newspaper Open Data API
Adjust Estimates of Learning for Guessing
Bootstrap Analyses of Sampling Uncertainty in Goodness-of-Fit
Statistics
Statistical Analysis of Monthly Background Checks of Gun
Purchases
A User-Oriented Statistical Toolkit for Analytical Variance
Estimation
Download and Process Public Domain Works from Project Gutenberg
Regularized Categorial Effects/Categorial Effect Modifiers in
GLMs
Regularized Categorial Effects/Categorial Effect
Modifiers/Continuous/Smooth effects in GLMs
Regularized Categorical Effects/Categorical Effect
Modifiers/Continuous/Smooth effects in GLMs
Regularized Categorical Effects/Categorical Effect
Modifiers/Continuous/Smooth Effects in GLMs
Global Validation of Linear Models Assumptions
Manhattan, Q-Q, and PCA Plots using 'ggplot2'
'REST' 'API' Client for the 'NHGRI'-'EBI' 'GWAS' Catalog
A Shiny App to Aid Interpretation of Geometrically-Weighted
Degree Estimates in Exponential Random Graph Models
Controlling the genome-wide type I error rate in association
mapping experiments
Geographically Weighted Partial Correlation Mapper
Geographically weighted regression with penalties and diagnostic
tools
Fits geographically weighted regression models with diagnostic
tools
Fits Geographically Weighted Regression Models with Diagnostic
Tools
A Meta Analysis for Estimating the Hubble Constant via Time
Delay Cosmography
R Interface for the 'H2O' Scalable Machine Learning Platform
Machine Learning Model Evaluation for 'h2o' Package
Hierarchical Bayesian Modeling of Decision-Making Tasks
Hierarchical Item Response Theory Models
Hierarchical Joint Analysis of Marginal Summary Statistics
Toolkit for Data Analytics in Human Resources
hierarchical Bayesian species distribution models
Hierarchical Bayesian Species Distribution Models
Software to Perform Haar Fisz Transforms
Software to perform Haar Fisz transforms
Detecting Spatial Clustering Based on Connection Cost Between
Grids
Convert Data Types and Get Non-Astonishing Results
Wrapper for the 'Official Hacker News' API
Additional Tools for Splitting and Cleaning Data
A Tidy Framework to Hack Gene Expression Signatures
Analysis Framework for Monte Carlo Simulation Data in Physics
Analysis of Plant Pathogen Pathotype Complexities, Distributions
and Diversity
Authenticated HTTP Request Client for the 'Hakai' API
Highly Adaptive Lasso Conditional Density Estimation
Show certain type of comments from function bodies as
"live-help"
Hierarchical Optimal Matching and Machine Learning Toolbox
Useful Functions for Handfully Manipulating and Analyzing Data
with Data.frame Format
Provides Easy Downloading Capabilities for the UK Parliament API
Likelihood inference of trait associations with SNP haplotypes and other attributes using the EM Algorithm
Inference of trait associations with SNP haplotypes and other attributes using the EM Algorithm
Inference of trait associations with SNP haplotypes and other
attributes using the EM Algorithm
Inference of Trait Associations with SNP Haplotypes and Other
Attributes using the EM Algorithm
Estimate Haplotype Relative Risks in Case-Control Data
Score Tests for Association of Traits with Haplotypes when
Linkage Phase is Ambiguous.
Statistical Analysis of Haplotypes with Traits and
Covariates when Linkage Phase is Ambiguous.
Statistical Analysis of Haplotypes with Traits and Covariates when Linkage Phase is Ambiguous
Statistical Analysis of Haplotypes with Traits and Covariates
when Linkage Phase is Ambiguous
Reconstruction of Haplotype-Blocks from Time Series Data
Tool for Clustering Genotypes in Haplotypes
Haplotype Inference and Statistical Analysis of Genetic
Variation
Manipulating DNA Sequences and Estimating Unambiguous Haplotype
Network with Statistical Parsimony
Calculate Upcoming Birthday Dates of Github Repos
Harmonic Mean p-Values and Model Averaging by Mean Maximum
Likelihood
Fast, Sensitive, and Accurate Integration of Single Cell Data
Wrangle Phylogenetic Distance Matrices and Other Utilities
Palettes Generated from All "Harry Potter" Movies
Full feature implementation of hash/associated
arrays/dictionaries
Full Feature Implementation of Hash/Associated
Arrays/Dictionaries
Full Featured Implementation of Hash Tables/Associative
Arrays/Dictionaries
A collection of non-cryptographic hash functions
Generate Short Unique YouTube-Like IDs (Hashes) from Integers
Import and Export 'SPSS', 'Stata' and 'SAS' Files
hawkes process simulation and calibration toolkit
Hawkes process simulation and calibration toolkit
Estimation of Hawkes Processes from Binned Observations
Identifying Foggy and Cloudy Images by Quantifying Hazeness
Identifying Foggy and Cloudy Images by Quantifying Haziness
Damage functions from FEMA's HAZUS software for use in modeling
financial losses from natural disasters
Hierarchical Bayesian Benefit-Risk Assessment Using Discrete
Choice Experiment
Hierarchical Bayesian Design for Clinical Trials
Hill/Bliss Independence Model for Combination Vaccines
Hierarchial Bayesian Analysis of Recognition Memory
Hierarchical Bayesian Analysis of Recognition Memory
Hierarchical Bayesian Small Area Estimation
Interval estimation for the parameters of linear models with
heteroskedasticity (Wild Bootstrap)
Design and Analysis of Hierarchical Composite Endpoints
Change Point Estimation for Regression with Heteroscedastic Data
Using Historical Controls for Designing Phase II Clinical Trials
A Batch Process for High Dimensional Imputation
Change-Point Analysis of High-Dimensional Time Series via Binary
Segmentation
Easy Manipulation of Out of Memory Data Sets
Use known groups in high-dimensional data to derive scores for plots
Use known groups in high-dimensional data to derive scores for
plots
Use Known Groups in High-Dimensional Data to Derive Scores for
Plots
Hierarchical DECOmposition of Entropy for Categorical Map Comparisons
Interface to the 'HDF5' Binary Data Format
Statistical Inference for Noisy Vector Autoregression
High-Dimensional Regression with Measurement Error
Nomograms for High-Dimensional Cox Models
Benchmarking and Visualization Toolkit for Penalized Cox Models
Hierarchical Dirichlet Process Generalized Linear Models
Principal Component Analysis in High-Dimensional Data
Interface to the UNDR Human Development Report API
Highest density regions and conditional density estimation
Highest Density Regions and Conditional Density Estimation
Generate Samples from Multivariate Truncated Normal
Distributions
Compose Sentences to Describe Comparisons
Financial Projections and Planning for Health Care Practices
The Machine Learning and AI Modeling Companion to 'healthyR'
The Time Series Modeling Companion to 'healthyR'
Easily Install and Load the 'healthyverse'
Easily Download Heaps of PDF and CSV Files
Heat exchange calculations during physical activity.
Heatmap Fit Statistic For Binary Dependent Variable Models
Fit statistic for binary dependent variable models
Fit Statistic for Binary Dependent Variable Models
Interactive Cluster Heat Maps Using 'plotly'
Interactive Cluster Heat Maps Using 'plotly' and 'ggplot2'
Estimation in the linear mixed model using heavy-tailed
distributions
Package for outliers accommodation using heavy-tailed
distributions
Package for robust estimation using heavy-tailed distributions
Package for outliers accomodation using heavy-tailed
distributions
Robust Estimation Using Heavy-Tailed Distributions
Markov Models for Health Economic Evaluations
Calculate Healthy Eating Index (HEI) Scores
Decode and Validate HEIMS Data from Department of Education,
Australia
Preprocess Data and Get Better Insights from Machine Learning
Models
Providing 'stringsAsFactors=FALSE' Variants of 'data.frame()'
and 'as.data.frame()'
Minimal Example of Using 'Rust' Code in 'R'
Minimal Examples of Using Rust Code in R
Access London Natural History Museum Host-Helminth Record
Database
Visualizing Tests in Multivariate Linear Models
Visualizing Hypothesis Tests in Multivariate Linear Models
'sf'-Based Interface to the 'HERE' REST APIs
Hierarchical Exponential-Family Random Graph Models
Hierarchical Exponential-Family Random Graph Models with Local
Dependence
Marker-based Estimation of Heritability Using Individual Plant
or Plot Data
Marker-Based Estimation of Heritability Using Individual Plant
or Plot Data
Efficient Sequential and Batch Estimation of Probability Density
Functions, Cumulative Distribution Functions and Quantiles
Efficient Sequential and Batch Estimation of Univariate and
Bivariate Probability Density Functions and Cumulative
Distribution Functions along with Quantiles (Univariate) and
Spearman's Correlation (Bivariate)
Efficient Sequential and Batch Estimation of Univariate and
Bivariate Probability Density Functions and Cumulative
Distribution Functions along with Quantiles (Univariate) and
Nonparametric Correlation (Bivariate)
Health-Economic Simulation Modeling and Decision Analysis
Health Economic Simulation Modeling and Decision Analysis
Heteroskedastic Gaussian Process Modeling and Design under
Replication
Assessing Heterogeneity in the Utility of a Surrogate Marker
Testing for a Treatment Effect Using a Heterogeneous Surrogate
Marker
Heterogeneous Treatment Effects in Regression Analysis
Fisherian and Neymanian Methods for Detecting and Measuring
Treatment Effect Variation
Structural Handling of Finnish Personal Identity Numbers
Structural Handling of Finnish Personal Identity Codes
Heuristics Including Take the Best and Unit-Weight Linear
Discovery of Process Models with the Heuristics Miner
Estimate Hierarchical Feature Regression Models
hglm is used to fit hierarchical generalized linear models.
Holonomic Gradient Method and Gradient Descent
Download and Import the HUGO Gene Nomenclature Committee
('HGNC') Data Set into R
Hierarchical and Geographically Weighted Regression
HHCART(G) - A Reflected Feature Space for CART
Age-Structured Spatio-Temporal Models for Infectious Disease
Counts
Calculate and Visualize the Herfindahl-Hirschman Index
Hidden Hybrid Markov/Semi-Markov Model Fitting
The Hilbert-Huang Transform: Tools and Methods
Individual-Level, Summary-Level and Single-Step Bayesian
Regression Model
Conduct the F test for hidden additivity in two-factor
experiments
The all-Configurations, Maximum-Interaction F-Test for Hidden
Additivity
The All-Configurations, Maximum-Interaction F-Test for Hidden
Additivity
Identify Influential Observations in High Dimension
Hierarchical Multiplicative Partitioning of Complex Phenotypes
Functions for performing hierarchical analysis of distance
sampling data
Functions For Performing Hierarchical Analysis of Distance
Sampling Data
Functions to Perform Hierarchical Analysis of Distance Sampling
Data
Set Data Visualization Using Hierarchies
Analysis of Dynamics Hierarchy Formation
Estimation and tests of hierarchical F-statistics
Estimation and Tests of Hierarchical F-Statistics
Convex Hierarchical Testing of Interactions
Two-Sample Tests for Equality of Means in High Dimension
Testing Two-Sample Mean in High Dimension
Feature Selection for High Dimensional Survival Data
Design of High-Order Portfolios Including Skewness and Kurtosis
High Throughput Screening for Plate Based Essays
High-Throughput Screening for Plate Based Essays
High-Throughput Screening for Plate Based Assays
Simultaneous Critical Values for t-Tests in Very High Dimensions
Two-Sample Tests for High-Dimensional Mean Vectors
Determining and evaluating high-risk zones
Determining and Evaluating High-Risk Zones
Statistical Inference for Online Learning and Stochastic
Approximation via HiGrad
Hilbert Similarity Index for High Dimensional Data
Integral Analysis of Diversity Based on Hill Numbers
Create Hillshade Relief Maps Using Ray-Tracing
High Mach Finds Routes for Supersonic Aircraft
Simulating the Development of h-Index Values
H-Index Calculator using Data from a Web of Science (WoS)
Citation Report
Tools for hypothesis testing based on Hypergeometric
Intersection distributions
Tools for Hypothesis Testing Based on Hypergeometric
Intersection Distributions
Parentage Assignment using Bi-Allelic Genetic Markers
Hierarchical Semiparametric Regression of Test Statistics
Construction of regular and irregular histograms with different
options for automatic choice of bins
Construction of Regular and Irregular Histograms with Different
Options for Automatic Choice of Bins
Non-Longitudinal Bayesian Historical Borrowing Models
Longitudinal Bayesian Historical Borrowing Models
Enhanced Command History Tracking for R Sessions and Dynamic
Documents
"Hit and Run" method for sampling uniformly from convex shapes.
"Hit and Run" method for sampling uniformly form convex shapes.
"Hit and Run" and "Shake and Bake" for Sampling Uniformly from
Convex Shapes
"Hit and Run" and "Shake and Bake" for Sampling Uniformly From
Convex Shapes
Ensemble Clustering using K Means and Hierarchical Clustering
Spatial Extreme Value Analysis with the Hierarchical Model of
Reich and Shaby (2012)
API to Retrieve Data from Hong Kong Stock Exchange
Hidden Markov Cognitive Diagnosis Models for Learning
Fit Statistical Models Using Hamiltonian Monte Carlo
The H-Measure and Other Scalar Classification Performance
Metrics
The H-measure and other scalar classification performance
metrics
High-Dimensional Mixed Graphical Models Estimation
Hidden Markov models with discrete non-parametric
observation distributions.
Hidden Markov models with discrete non-parametric observation
distributions.
Hidden Markov Models with Discrete Non-Parametric Observation
Distributions
Constructs Asymmetric Hidden Markov Models
Hidden Markov Models for High Dimensional Data
"Mixture and Hidden Markov Models with R" Datasets and Example
Code
Half-Normal Plots with Simulation Envelopes
Information Retrieval for Genetic Datasets
Collect and Retrieve Annotation Data for Various Genomic Data
Using Different Webservices
Collect and Retrieve Annotation Data for Various Genomic Data
Using Different Web Services
Download and Visualize Essential Climate Change Data
Higher-Order Generalized Singular Value Decomposition
Statistics for Holland's Theory of Vocational Choice
A Tidy Interface for Simulating Multivariate Data
Methods for Closed Testing with Simes Inequality, in Particular
Hommel's Method
Quick Access to Homologene and Gene Annotation Updates
Homogeneity tests for Regional Frequency Analysis
Functions to Access Men's Basketball Play by Play Data
Access Men's Basketball Play by Play Data
Hierarchical Ordered Partitioning and Collapsing Hybrid (HOPACH)
Hierarchical Ordered Partitioning and Collapsing Hybrid
(HOPACH)
Transmissions and Receptions in a Hop by Hop Network
Hierarchical Ordered Probit Models with Application to Reporting
Heterogeneity
Calculate Hopkins Statistic for Clustering
Horn's (1965) Test to Determine the Number of Components/Factors
Flexible Non-Linear Regression with the HorseRule Algorithm
Nonlinear Regression using Horseshoe Prior
CSS Animations for 'shiny' Button Elements
Calculate How many Imputations are Needed for Multiple
Imputation
A lower bound for the number of correct rejections
High Performance Cluster Models Based on Kiefer-Wolfowitz
Recursion
Functions to plot graphviz style graphs of sets of HPO terms
Computation of power and sample size for tests of the general
linear hypothesis
Miscellaneous convenience functions and dataset
Miscellaneous Convenience Functions and Dataset
Regularization Paths for Huber Loss Regression and Quantile
Regression Penalized by Lasso or Elastic-Net
Regularization Paths for Lasso or Elastic-Net Penalized Huber
Loss Regression and Quantile Regression
Hazard Ratio Estimation using Cox Model Weighted by the
Estimated Propensity Score
Additional Themes, Theme Components and Utilities for 'ggplot2'
Nonparametric Assessment Between Competing Risks Hazard Ratios
Group Variable Selection for Quantile and Robust Mean Regression
Calculation of Covariance Between Markers for Half-Sib Families
Manage, Analyse and Simulate Hyperspectral Data in R
Manage, Analyse and Simulate Hyperspectral Data
Canonical Correlation Analysis based on Kernel Independence
Measures
A Path-Based BCD for Proximal Function of Latent Group Lasso
Phasing and imputation of half-sib families using SNP data
Phasing, sire imputation, recombination events identification
and pedigree reconstruction of half-sib families using SNP data
Phasing, Pedigree Reconstruction, Sire Imputation and
Recombination Events Identification of Half-sib Families Using
SNP Data
Estimation of Recombination Rate and Maternal LD in Half-Sibs
Hierarchical Shrinkage Stan Models for Biomarker Selection
Reweighted Marginal Hypothesis Tests for Clustered Data
Convert 'HTML' to 'R' with a 'Shiny' App
Generates HTML Tag Strings for HTML5 Elements Included in
Mozilla's Documentation of HTML5
Simple Scraping and Tidy Webpage Summaries
Clean Up or Pretty Print Gnarly HTML and XHTML
Tidy Up and Test XPath Queries on HTML and XML Content
Historical Tree Ensembles for Longitudinal Data
Report Errors in Web Applications with 'Problem Details' (RFC
7807)
Perform HTTP Requests and Process the Responses
Get Data from the French National Database on Water 'Hub'Eau'
Providing Data from the US Department of Housing and Urban
Development
Distinct Colours Palettes Based on 'iwanthue'
Distinct Colour Palettes Based on 'iwanthue'
Simplify Analysis and Annotation of Human Microarray Datasets
An R Package for Calculating Water Vapor Measures from
Temperature and Relative Humidity
Calculate Water Vapor Measures from Temperature and Dew Point
Morphological Analysis and Spell Checker for R
High-Performance Stemmer, Tokenizer, and Spell Checker for R
High-Performance Stemmer, Tokenizer, and Spell Checker
Zero-Inflated and Hurdle Modelling Using Bayesian Inference
Explore and Map County-Level Hurricane Exposure in the United
States
Easily Create and Style Tables for LaTeX, HTML and Other Formats
Models and tests for departure from Hardy-Weinberg equilibrium and
independence between loci.
Models and tests for departure from Hardy-Weinberg equilibrium
and independence between loci.
Models and Tests for Departure from Hardy-Weinberg Equilibrium
and Independence Between Loci
HTML Writer - Outputs R objects in HTML format
HTML Writer - Outputs R Objects in HTML Format
hwriterPlus: Extending the hwriter Package
Build, deploy and evaluate a Hybrid Ensemble
Build, Deploy and Evaluate Hybrid Ensembles
Stochastic Hybrid Models in Dynamic Networks
An R Package for the Stochastic Simulation of Disease Spreading
in Dynamic Networks
Function that Creates a Heat Map from Hybridization Data
Tools and models for hydrological applications
Extract Event Statistics in Hydrologic Time Series
Goodness-of-fit functions for comparison of simulated and
observed hydrological time series
Goodness-of-Fit Functions for Comparison of Simulated and
Observed Hydrological Time Series
Model-Independent Particle Swarm Optimisation for Environmental
Models
Particle Swarm Optimisation, with focus on Environmental Models
Particle Swarm Optimisation, with Focus on Environmental Models
Time series management, analysis and interpolation for
hydrological modelling
Time Series Management, Analysis and Interpolation for
Hydrological Modelling
Hydrological Tools for Handling Hydro-Meteorological Data from
Argentina and Chile
Groundwater data presentation and interpretation.
Groundwater data presentation and interpretation
Groundwater Data Presentation and Interpretation
Hydrologic Network Linking Data and Tools
Detect and Characterize Sub-Daily Flow Fluctuations
Hydrogeology Steps for the 'recipes' Package
Graphical user interface for exploring hydrological time series in R
Graphical user interface for exploring hydrological time series
Interface to the Greek National Data Bank for
Hydrometeorological Information
Hydrologic indices for daily time series data.
Hydrologic indices for daily time series data
Hydrologic Indices for Daily Time Series Data
Hydrological Tools for Handling Hydro-Meteorological Data
Records
Generic N-Dimensional Hyperplane Fitting with Heteroscedastic
Covariant Errors and Intrinsic Scatter
Hyper-Ensemble Smote Undersampled Random Forests
Work with Hyperspectral Data, i.e. Spectra + Meta Information
(Spatial, Time, Concentration, ...)
Interface for hyperspectral data sets, i.e. spectra + meta
information (spatial, time, concentration, ...)
Interface for hyperspectral data, i.e. spectra + meta info
(spatial, time, concentration, ...)
Accessory Tools for Preprocessing Hyper-Spectral Images
A generalization of the Dirichlet distribution
A Generalization of the Dirichlet Distribution
Machine Learning of Hyperrectangular Gating Strategies for
High-Dimensional Cytometry
Overlap Detection in n-Dimensional Space
Attribute Sampling Plan with Exact Hypergeometric Probabilities
using Chebyshev Polynomials
High-dimensional kernel density estimation and geometry
operations.
High-dimensional Kernel Density Estimation and Geometry
Operations
High-dimensional kernel density estimation and geometry
operations
High-Dimensional Kernel Density Estimation and Geometry
Operations
High Dimensional Geometry and Set Operations Using Kernel
Density Estimation, Support Vector Machines, and Convex Hulls
High Dimensional Geometry, Set Operations, Projection, and
Inference Using Kernel Density Estimation, Support Vector
Machines, and Convex Hulls
Tools to Hyphenate Strings Using the 'Hunspell' Hyphenation
Library
Confidence Intervals and Tests of Statistical Hypotheses
Wrapper for the 'Hypothes.is' Web Annotation Service
Simulation of genomic data in applied genetics
Simulation of Genomic Data in Applied Genetics
A Tool Used to Conduct Hypsometric Analysis of a Watershed
Get Pedestrian Frequency Data from the 'Hystreet' Project
Tools for Modeling Rate-Dependent Hysteretic Processes and
Ellipses
Internationalization Data from the 'Unicode CLDR' in Tabular
Form
Functions to Work with 'incidence2' Objects
Two-Stage Adaptive Dose-Finding Clinical Trial Design
Integrative Bayesian Analysis of Transcriptomic and CGH data
Integrative Bayesian Analysis of Transcriptomic and CGH Data
An Interface to R2WinBUGS/R2jags by gWidgets
An Interface to WinBUGS/OpenBUGS/JAGS by gWidgets
Model Agnostic Instance Level Variable Attributions
A copy number and expression-based classifier for breast
tumours.
A copy number and expression-based classifier for breast tumours
A Copy Number and Expression-Based Classifier for Breast Tumours
Infer Community Assembly Mechanisms by Phylogenetic-Bin-Based
Null Model Analysis
Integrative Conditional Autoregressive Horseshoe Model
Analyzing High-Throughput Single Cell Sequencing Data
A Minimal Wrapper Around NIH's 'iCite' API
A Button-Based GUI for Financial and Economic Data Analysis
Integrative clustering of multiple genomic data types
Integrative Differential Network Analysis in Genomics
Integrated Discovery of Oncogenic Signatures
Durability of Vaccine Efficacy Against SARS-CoV-2 Infection
R Analysis package for iDynoMiCS Simulation Results
Integrating External Controls into Association Test
An integrative factor analysis model for drug-pathway
association inference
Incremental Feature Selection Algorithm accelerated by GPU
Machine Learning Time Series Forecasting
Integrative Gene Set Enrichment Analysis Approaches
Statistical Tests and Utilities for Genetic Association
Tool for sending interactive bioinformatic heatmaps with
tool-tip content.
Computing Individual Components of the Gini and the Theil
Indices
Improved Laplace Approximation for Integrals of Unimodal
Functions
Multi-Reader, Multi-Case Analysis Methods (ROC, Agreement, and
Other Metrics)
Likelihood Methods for Mediation Analysis
Interpolation and Extrapolation for Species Diversity
Integrative Network Omnibus Total Effect Test
Tools for Exploring Multiple Response Data
Graphical Tools for Exploring Data with 'iNZight'
Tools for Exploring Regression Models with 'iNZight'
Interpolation and Extrapolation for Phylogenetic Diversity
Integrative Random Forest for Gene Regulatory Network Inference
Regression methods for interval-valued variables
Regression Methods for Interval-Valued Variables
Integrative Dimension Reduction Analysis for Multi-Source Data
A Graphical Interface to Perform STOCSY Analyses on NMR Data
image-based High-Throughput RNAi Screening Analysis Tool
The package can implement the graph-based reconstruction,
analyses, and visualization of the KEGG pathways.
The package can implement the graph-based reconstruction and
analyses of the KEGG pathways.
Improved methods for causal inference and missing data problems
Improved Methods for Causal Inference and Missing Data Problems
The Irvine Robustness Assessment for Qualitative Comparative
Analysis
Analysis of Intra Annual Density Fluctuations
Formulations of the International Association for the Properties
of Water and Steam
Formulations of International Association for the Properties of
Water and Steam
Functions and Datasets for the Data Science Course at IBAW
R Wrapper for Istanbul Municipality Open Data Portal
Regression Methods for IBD Linkage With Covariates
Regression Methods for IBD Linkage with Covariates
Irregular-lattice based ensemble empirical mode decomposition
An R Package for Implementing Belief Functions
Connect to Your IBM 'Acoustic' Data with 'R'
Toolkits to Develop Individual-Based Models in Infectious
Disease
Generate Personality Insights Sunburst Diagrams
Inequality constrained inference in linear normal situations
Inequality Constrained Inference in Linear Normal Situations
Standardized high-throughput evaluation of compound screens
Standardized high-throughput evaluation of cell-based compound screens
Standardized high-throughput evaluation of cell-based compound
screens
A Modified Random Survival Forest Algorithm
Independent Components Analysis (ICA) based eye-movement
correction.
Independent Components Analysis (ICA) based artifact correction.
Subsetting using Focused Identification of the Germplasm
Strategy (FIGS)
Calibrates and Reweights Units in Samples
Intraclass Correlation Coefficient for Count Data
Multilevel Model Intraclass Correlation for Slope Heterogeneity
Multilevel model intraclass correlation for slope heterogeneity
Computation of the Double-Entry Intraclass Correlation
Tools for Working with ICD-9 and ICD-10 Codes, and Finding
Comorbidities
Comorbidity Calculations and Tools for ICD-9 and ICD-10 Codes
International Classifcation of Diseases (ICD) Data
tools for working with ICD-9 codes, and finding comorbidities
Tools for Working with ICD-9 Codes, and Finding Comorbidities
EM by the Method of Weights for Incomplete Categorical Data in
Generlized Linear Models
'ICD' Programs for Injury Categorization in R
Parameter Estimation in Linear Transformation Model with
Interval-Censored Data and Covariate Measurement Error
Regression Models for Interval Censored Data
Accompanion to the Book on Interval Censoring by Bogaerts,
Komarek, and Lesaffre
Study Design and Data Analysis in the presence of error-prone
diagnostic tests and self-reported outcomes
Study Design and Data Analysis in the Presence of Error-Prone
Diagnostic Tests and Self-Reported Outcomes
Provides User Tokens for Access to ICES Web Services
DATRAS Trawl Survey Database Web Services
Functions to Interact with the ICES Data Submission Utility
(DATSU)
Run Quality Checks on Data Prior to Submission to ICES
Stock Assessment Graphs Database Web Services
Compute and Plot Ichimoku Kinko Hyo Cloud Charts
Visualization and Tools for Ichimoku Kinko Hyo Strategies
Empirical Bayes Variable Selection via ICM/M Algorithm
Graphical and Spatial Analysis for Prehistoric Iconography
Global Triangular and Penta-Hexagonal Grids Based on Tessellated
Icosahedra
Reproducible Retrieval from the ICPSR Data Archive
Reproducible Data Retrieval from the ICPSR Archive
R Interface to the US Census Bureau International Data Base API
Bayesian IRT Ideal Point Models with 'Stan'
Generalized IRT Ideal Point Models with 'Stan'
Easy Manipulation of IDEAM's Climatological Data
Efficient Designs for Discrete Choice Experiments
Inference in Randomized Controlled Trials with Death and
Missingness
Jacquard Condensed Coefficients of Identity
Bayesian Dynamic Spatio-Temporal Models, Including the
Integrodifference Equation Model
Various Methods for Estimating Intrinsic Dimension
Idiograms with Marks and Karyotype Indices
Shiny App. Idiograms with Marks and Karyotype Indices
Regression Model for Progressive Illness Death Data
Infectious Disease Model Library and Utilities
A Cartographic Tool to Chart Spatial Microbial Interaction
Networks
Convert Files to and from IDX Format to Vectors, Matrices and
Arrays
Irucka Embry's Miscellaneous USGS Functions
Irucka Embry's Miscellaneous USGS Data Collection
Functions to set and get the IEEE rounding mode
Irucka Embry's Miscellaneous Data Collection
Irucka Embry's Miscellaneous Text Collection
Isolation-Forest Based 'CNV' Detection from 'NGS' Data
Toolkit for Item Factor Analysis with OpenMx
Toolkit for Item Factor Analysis with 'OpenMx'
Italian Fiscal Code ('Codice Fiscale') Utilities
Package for the robust and classical versions of the inverse Gaussian distribution
Package for a General Class of Inverse Gaussian Distributions
Instagram 2014 Vancouver Top Colour Dataset
Guided Analytics for Testing Manufacturing Parameters
Computational Tools for the IG and IGL Copula Families
Interpreting Glucose Data from Continuous Glucose Monitors
Routines for simple graphs, network analysis.
Network analysis and visualization, old, deprecated package.
A collection of network data sets for the igraph package
A Collection of Network Data Sets for the Igraph Package
A Collection of Network Data Sets for the 'igraph' Package
Convert iGraph graps to SoNIA .son files
For Writing Graduate Institute Geneva Documents
For Writing Geneva Graduate Institute Documents
Download Data from the International House Price Database
Comprehensive TIFF I/O with Full Support for 'ImageJ' TIFF Files
Consistency, Homogeneity and Summary Statistics of
Climatological Data
Lee-Carter Mortality Models using Iterative Fitting Algorithms
Imprecise Inferential Framework for Poisson Sampling Models
Imprecise Inferential Framework for Poisson Sampling Model
Imprecise Inference for Poisson Sampling Models
Incremental Mixture Approximate Bayesian Computation (IMABC)
Implementation of the Canny Edge Detector for Images
Implementation of the Unsupervised Smooth Contour Line Detection
for Images
Find Corners in Digital Images with FAST-9
Implementation of the Harris Corner Detection for Images
Binarize Images for Enhancing Optical Character Recognition
Image Processing Functionality using the 'dlib' Package
Convolutional Neural Network for Face Detection
Aids in Processing and Plotting Data from a Lemna-Tec
Scananalyzer
Image Statistics Based on Processing Fluency
Image Processing Library Based on 'CImg'
Extra Image Processing Library Based on 'imager'
Deep Learning Models for Image Segmentation
Simple 'htmlwidgets' Image Viewer with WebGL Brightness/Contrast
Simulate General Insurance Policies and Losses
Imaging Engine, Tools for Application of Image Filters to Data
Matrices
IMAGing engINE, Tools for Application of Image Filters to Data
Matrices
IMAGing engINEs, Tools for Application of Image Filters to Data
Matrices
Preprocessing Algorithms for Imbalanced Datasets
Mass Cytometry S4 Class Structure Pipeline for Images
Get Movie, Television Data from the 'imdb' Database
Download Data from the International Monetary Fund's Data API
Share plots using the imgur.com image hosting service
Polish Meteorological and Hydrological Data
Candidate Prescriptions Discovery Based on Pathway Fingerprint
Poly-Pharmacology Toolkit for Traditional Chinese Medicine
Research
Item Response Models for Multiple Ratings
Bioinformatics Analysis of T-Cell and B-Cell Immune Repertoires
Tunable Simulation of B- And T-Cell Receptor Repertoires
CSS Layouts (Grid and Flexbox) Implementation for R/Shiny
Quantification of Population-Level Impact of Vaccination
Mechanical Loading Prediction Through Accelerometer Data
Imprecise Imputation for Statistical Matching
Array Operations for Arrays of Mismatching Sizes
Computes the Scores for Different Implicit Measures
Compute Scores for Different Implicit Measures
Convert Between Bookmaker Odds and Probabilities
Enables Importing/Loadig of Packages or Functions While Creating
an Alias for Them
Enables Importing/Loading of Packages or Functions While
Creating an Alias for Them
Download and Manage Open Data from INEGI
Minimum distance estimation in an imprecise probability model
Calculate Birth Year-Specific Probabilities of Immune Imprinting
to Influenza
Classification Trees with Imprecise Probabilities
Imputation of Financial Time Series with Missing Values
Imputation of Financial Time Series with Missing Values and/or
Outliers
Ease the Implementation of Imputation Methods
A collection of methods for left-censored missing data
imputation
A Collection of Methods for Left-Censored Missing Data
Imputation
The Multifactor Dimensionality Reduction (MDR) Analysis for Imcomplete Data
The Multifactor Dimensionality Reduction (MDR) Analysis for
Imcomplete Data
The Multifactor Dimensionality Reduction (MDR) Analysis for
Incomplete Data
Impute Missing Values in a Predictive Context
Imputation Methods for Multivariate Multinomial Data
Impute Missing Data in Time Series Data with PSF Based Method
A General Multivariate Imputation Framework
Impute Missing Rare Earth Element Data Using a Lattice-Strain
Derived Method
Test Bench for Missing Data Imputing Models/Methods Comparison
Test Bench for the Comparison of Imputation Methods
Imputing the last largest censored datum under weighted least
squares
Imputing the last largest censored observation/observations
under weighted least squares
Imputing the Last Largest Censored Observation(s) under Weighted
Least Squares
Imputing the Last Largest Censored Observation(s) Under Weighted
Least Squares
Immune Cell Gene Signatures for Profiling the Microenvironment
of Solid Tumours
Initialization Algorithms for Partitioning Cluster Analysis
Mixture models for longitudinal count data.
Analysing Inbreeding Based on Genetic Markers
Recognize and Handle Data in Formats Used by Swedish Cancer
Centers
Pipe-Friendly Vector Replacement with Case Statements
Incremental Graphlet Counting for Network Optimisation
Compute, Handle, Plot and Model Incidence of Dated Events
Compute, Handle and Plot Incidence of Dated Events
Implements Empirical Bayes Incidence Curves
Generates Incidence Matrices and Bipartite Graphs
Parametric Time-to-Event Analysis with Variable Incubation
Phases
Insertion Deletion Analysis While Accounting for Possible
Missing Data
Estimates Weights for Confounding Control for Continuous-Valued
Exposures
A simple R Wrapper for the indico set of APIs - http://indico.io
Functions to assess the strength and significance of
relationship of species site group associations
Studying the statistical relationship between species and groups
of sites
Relationship Between Species and Groups of Sites
Relationship between Species and Groups of Sites
Elicitation of Independent Conditional Means Priors for
Generalised Linear Models
Framework for Specifying and Simulating Individual Based Models
Data, Functions and Support Materials from the Book "industRial
Data Science"
Integrate INEGI’s (Mexican Stats Office) API with R
Measuring inequality, concentration and poverty
Measuring Inequality, Concentration, and Poverty
Performing Inference on Networks with Regularization
Functions to extract inferential values of a fitted model object
Methods for Causal Inference with Interference
Tools for recognizing influential data in mixed models
Tools for detecting influential data in mixed effects models
Tools for Detecting Influential Data in Mixed Effects Models
Case Influence in Structural Equation Models
Identify Influential Observations in Binary Classification
Software Tools to Quantify Structural Importance of Nodes in a
Network
Identification of the Most Influential Nodes (Hubs)
Identification of the Most Influential Nodes
Identification and Classification of the Most Influential Nodes
Computation of the Coefficients of the Variance Components for
the Expected Mean Squares
Information Decomposition of the Two-phase Experiments
Information Decomposition of Two-phase Experiments
Information Decomposition of Two-Phase Experiments
An R wrapper for the infochimps.com API services
Sequence Statistics for Relational Event Models
informR: R Tools for Creating Sequence Statistics
R Tools for Creating Sequence Statistics
Sensitivity Analysis Informed by a Test for Bias
Effects and Importances of Model Ingredients
Spatial Inference using Integrated Nested Laplace Approximation
Bayesian Latent Gaussian Modelling using INLA and Extensions
Collection of Datasets for the USGS-INL Aquifer Monitoring
Networks
Inline C, C++, Fortran function calls from R
Functions to Inline C, C++, Fortran Function Calls from R
Convert inline comments to documentation
Convert Inline Comments to Documentation
Miscellaneous Functions for the USGS INL Project Office
Infix Operators for Detection, Subsetting and Replacement
Analyse Text Documents Using Ecological Tools
Ecological Database of the World's Insect Pathogens
Tools to Easily Download Data from INSEE BDM Database
insideRODE build in function with ODE solver and C/FORTRAN
interface to nlme
insideRODE includes buildin functions with deSolve solver and
C/FORTRAN interfaces to nlme, together with compiled codes.
Tools to Download Insider Transactions and Holdings
Easy Access to Model Information for Various Model Objects
Inspection, Comparison and Visualisation of Data Frames
Validation of Arguments and Objects in User-Defined Functions
Access to Instagram Ads via the 'Windsor.ai' API
Check, Install and Load CRAN & USGS GRAN Packages
Functions for updating and installing a new version of R and
other software - from R
Using R to install stuff (such as: R, Rtools, RStudio, git, and
more!)
Using R to Install Stuff (Such As: R, Rtools, RStudio, Git, and
More!)
Using R to Install Stuff (Such As: R, 'Rtools', 'RStudio',
'Git', and More!)
Using R to Install Stuff on Windows OS (Such As: R, 'Rtools',
'RStudio', 'Git', and More!)
Estimate Regression Models with Instrumental Variables
A Collection of Insurance Datasets Useful in Risk Classification
in Non-life Insurance.
Analysis of Time-Ordered Event Data with Missed Observations
Reproducible Integrated Species Distribution Models Across
Norway using 'INLA'
procedures for automated interpolation - methods only to be used
interactively, not included in intamap package
Interactive Add-on Functionality for 'intamap'
Semiparametric Regression on Cumulative Incidence Function with
Interval-Censored Competing Risks Data
Semiparametric Competing Risks Regression under Interval
Censoring
Semiparametric Competing Risks Regression under Left Truncation
and Interval Censoring
Semiparametric Competing Risks Regression under Left Truncation
and Interval Censoring with Missing Cause of Failure
Fast Spline Function Based Constrained Maximum Likelihood
Estimator for AUC Estimation of Interval Censored Survival Data
AUC Estimation of Interval Censored Survival Data
Iterated Convex Minorant Algorithm for interval censored event data
Iterated Convex Minorant Algorithm for interval censored event
data
Reconstruction of a Directed Acyclic Graph with Interventions
Integrative Analysis of RNA-Seq and ChIP-Seq Data
Integrating Multiple Modalities of High Throughput Assays Using
Item Response Theory
An Implementation of Interaction Graphs of Aleks Jakulin
Matched Clinical factors and microarray data (part of
integrativeME package)
Intensity of Change for Comparing Categorical Maps from
Sequential Intervals
Intensity Analysis of Spatial Point Patterns on Complex Networks
The Visualization of Interactive Circos Plot
A Package for Full Reporting of Interaction Analyses
Calculate Estimates in Models with Interaction
Calculates Critical Test Statistics to Control False Discovery
and Familywise Error Rates in Marginal Effects Plots
Calculates Critical Test Statistics to Control False Discovery
Rates in Marginal Effects Plots
Comprehensive, User-Friendly Toolkit for Probing Interactions
Cure Rate Estimators for Interval Censored Data
Interaction Analysis of Repeated Measure Data
Interaction Analysis of Repeatedly Measured Data
Exact Confidence Intervals in the Presence of Interference
Multiplicative Interaction Models Diagnostics and Visualization
Interference Color Charts for Polarized Light Microscopy
Coercion routines for network data objects in R
Coercion Routines for Network Data Objects
Scheduling Interim Analyses in Clinical Trials
App for Scheduling Interim Analyses in Clinical Trials
Converts Tabular Data to Interleaved Vectors
Importing Interlinearized Corpora and Dictionaries as Produced
by Descriptive Linguistics Software
Coercion Methods for Simplicial Complex Data Structures
Plot the Effects of Variables in Interaction Terms
Fit Interpretable Models and Explain Blackbox Machine Learning
Fit Interpretable Machine Learning Models and Explain Blackbox
Machine Learning
Fit Interpretable Machine Learning Models
Estimate the Confidence Interval and Interpret Step by Step
Binary Classifier Interpretation functions: Partial Dependence
Plots
Binary Classifier and Regression Model Interpretation Functions
Flexible Tools for Estimating Interactions
Weighted Logrank Tests and NPMLE for interval censored data
Weighted Logrank Tests and NPMLE for Interval Censored Data
Time-Weighted Averaging for Interval Data
Tools for working with points and intervals
Tools for Working with Points and Intervals
Hypothesis Testing Using the Overlapping Interval Estimates
Interventional Inference for Dynamic Bayesian Networks
Tools and Statistical Procedures in Plant Science
A Numerical Implementation of Interval-Valued Kriging
Mediation Analysis using Interventional Effects
linear programming solver by the interior point method and
graphically (two dimensions)
methods for analyzing introgression between divergent lineages
Data Manager of International Assessment Studies of Student
Performance
Interface to Popular R Functions for Data Science Pipelines
Interval and Enum-Type Representation of Vectors
Threshold regression that fits the (randomized drift) inverse
Gaussian distribution to survival data.
Threshold Regression that Fits the (Randomized Drift) Inverse
Gaussian Distribution to Survival Data
Analyse Biological Invasion Costs with the 'InvaCost' Database
Inventory Analytics and Cost Calculations
Inventory Analytics, Pricing and Markdowns
Reverse Engineers Regular Expression Patterns for R Objects
Calibration/Inverse Estimation with Linear and Nonlinear
Regression Models in R.
A unified framework for input-output operations in R
A Unified Framework for Input-Output Operations in R
Calling Copy Number Alterations in Amplicon Sequencing Data
Calculate the Number of Required Flows for Semiconductor
Sequencing
Functions for smoothing with infinite order flat-top kernels
Functions for Smoothing with Infinite Order Flat-Top Kernels
Importing and Manipulating Symmetric Input-Output Tables
Reproducible Input-Output Economics Analysis, Economic and
Environmental Impact Assessment with Empirical Data
Iota Inter Coder Reliability for Content Analysis
Iterative Pruning Population Admixture Inference Framework
Tools for Message Passing Between Processes
Inverse Probability of Censoring Weights to Deal with Treatment
Switch in Randomized Clinical Trials
Mixed models for complete and partial IPD survival meta-analysis
Individual patient and Mixed-level Meta-analysis of
Time-to-Event Outcomes
Tools for Individual patient data and Mixed-level Meta-analysis
Functions for characterizing subgroup analyses with
meta-analysis
Tools for subgroup analyses with multiple trial data using
aggregate statistics
ipdw: Interpolation by Inverse Path Distance Weighting
Spatial Interpolation by Inverse Path Distance Weighting
Fast Implementation of the Iterative Proportional Fitting
Procedure in C
Fast implementation of the iterative proportional fitting
procedure in C
List Balancing for Reweighting and Population Synthesis
Install R Packages on GitHub from Hub.fastgit.org
Install R Packages on GitHub from Hub.fastgit.xyz
Miscellaneous Functions for Data Cleaning and Analysis
Fits Integral Projection Models Using an Expression Based
Framework
Interfaces to Phylogenetic Software in R
Spatially Explicit Capture-Recapture by Inverse Prediction
Intuitionistic, Pythagorean, and Spherical Fuzzy Similarity
Measure
Manipulate, Validate and Resolve IP Addresses
Manipulate, Validate and Resolve 'IP' Addresses
Inverse Probability Weighted Cox Model with Corrected Sandwich
Variance
Inverse Probability Weighting Estimation of Average Treatment
Effect with Outcome Misclassification
Inverse Probability Weighted Estimation of Average Treatment
Effect with Misclassified Binary Outcome
Protein Quantification in Mass Spectrometry-Based Proteomics
Generate Chemical Strings (SMILES) with the Inverse QSPR Model
Functions to Handle and Preprocess Infrared Spectra
Iterated Racing for Automatic Algorithm Configuration
Iteratively Reweighted Boosting for Robust Analysis
Correlation Coefficients for Information Retrieval
Client for the EU Industrial Research and Industry Scoreboard
Global Innovation Through Company Level Data
Fast partial SVD by implicitly-restarted Lanczos
bidiagonalization
Fast Truncated SVD, PCA and Symmetric Eigendecomposition for
Large Dense and Sparse Matrices
Fast Truncated Singular Value Decomposition and Principal
Components Analysis for Large Dense and Sparse Matrices
Various Coefficients of Interrater Reliability and Agreement
Computing Chance-Corrected Agreement Coefficients (CAC)
Intraclass Correlations for Quantifying Inter-Rater Reliability
Coefficients of Interrater Reliability - Generalized for
Randomly Incomplete Datasets
Coefficients of Interrater Reliability – Generalized for
Randomly Incomplete Datasets
Functions for Irregularly Sampled AR(1) Processes
Item Response Theory and Computerized Adaptive Testing Functions
Item Response Theory Analysis with a Graphic User Interface
Utilities and Probability Distributions Related to Multidimensional Person Item Response Models (IRT)
Utilities and Probability Distributions Related to
Multidimensional Person Item Response Models (IRT)
Utilities and Probability Distributions Related to
Multidimensional Person Item Response Models
Simple interface to the estimation and plotting of IRT models
A Collection of Functions Related to Item Response Theory (IRT)
Power Analysis for IRT Models Using the Wald, LR, Score, and
Gradient Statistics
Estimation of Tree-Based Item Response Models
Implementation for the ISA Abstract Model
Crosswalks Between Classifications of Occupations
Provides data sets for Introduction to Statistical Data Analysis
for the Life Sciences
Provides datasets for Introduction to Statistical Data Analysis
for the Life Sciences
Provides Datasets for Introduction to Statistical Data Analysis
for the Life Sciences
Parse 'NOAA' Integrated Surface Data Files
Stochastic Island Biogeography Theory Made Easy
An Introduction to Statistical Modeling of Extreme Values
Index of Local Sensitivity to Nonignorability
Check if an 'externalptr' is a Null Pointer
Isotonic Regression on Survival Analysis
Discovery, Retrieval, and Analysis of Water Isotope Data
Generate Isolines and Isobands from Regularly Spaced Elevation
Grids
Isotope Origin Clustering and Assignment Tools
Tools for Carbonate Isotope Geochemistry
Clustering of Sites with Species Data using Indicative Species
Calculation of isotopic pattern for a given molecular formula
Active set and generalized PAVA for isotone optimization
Active Set and Generalized PAVA for Isotone Optimization
Penalized Isotonic Regression in one and two dimensions
Obtaining Open Data from Instituto Canario De Estadistica
(ISTAC) API
The Italian Survey on Household and Wealth, 2008 and 2010
Integral Transformation Methods for SDR in Regression
Approximate probability densities by iterated Laplace
Approximations
Approximate Probability Densities by Iterated Laplace
Approximations
Print Loop Iterations at Exponentially Disparate Intervals
Efficient iterator for permutations and combinations
Efficient Iterator for Permutations and Combinations
Efficient Iterators for Permutations and Combinations
itertools2: Functions creating iterators for efficient looping
The Interpolate, Truncate, Project (ITP) Root-Finding Algorithm
Tools for classification and regression trees, with an emphasis
on interpretability.
Running Interrupted Time Series Analysis
Interpreting Time Series and Autocorrelated Data Using GAMMs
Isolation Forest-Based Presence-Only Species Distribution
Modeling
Time series analysis package for students
Time Series Analysis Using the Innovations Algorithm
Access iTunes App Store Ratings and Reviews using R
To Access iTunes App Store Ratings and Reviews using R
Information Visualisation with UML and Graphs
Instrumental Variable Analysis in Case-Control Association
Studies
Bayesian Instrumental Variable Estimation and Model
Determination via Conditional Bayes Factors
Profiling Compliers and Non-Compliers for Instrumental Variable
Analysis
Hypothesis Testing in Cluster-Randomized Encouragement Designs
Ensures Mutually Consistent Beliefs When Using IVs
Instrumental fixed effect panel data model
General to Specific Modeling and Indicator Saturation in 2SLS
Models
Estimate IV-Optimal Individualized Treatment Rules
in vitro-in vivo correlation (IVIVC) modeling
A data analysis tool for in vitro-in vivo correlation (IVIVC)
A Data Analysis Tool for In Vitro-In Vivo Correlation (IVIVC)
Uses heteroscedasticity to estimate mismeasured and endogenous
regressor models
Statistical Inference and Diagnostics for Instrumental Variables
Model
Statistical Inference and Sensitivity Analysis for Instrumental
Variables Model
Instrumental Variables: Extrapolation by Marginal Treatment
Effects
Two-Stage Least-Squares Regression with Diagnostics
Instrumental-Variables Regression by '2SLS', '2SM', or '2SMM',
with Diagnostics
Create Independent Evidence in IV Analyses and Do Sensitivity
Analysis in Regression and IV Analysis
Structural Additive Cumulative Intensity Models with IV
Numerical evaluation willingness to pay based on interval data
Calculates the j-Score Between Two Clustering Assignments
Jaatha - A Fast Parameter Estimation Method for Evolutionary
Biology
A Fast Parameter Estimation Method for Evolutionary Biology
Simulation-Based Maximum Likelihood Parameter Estimation
Possible Adverse Events/Reactions from the
Vaccinations/Experimental Gene Therapies
Test Similarity Between Binary Data using Jaccard/Tanimoto
Coefficients
A Swift, Versatile Phylogenomic and High-Throughput Sequencing
Simulator
Jackknife estimates of Kaplan-Meier estimators or integrals.
Jackknife Estimates of Kaplan-Meier Estimators or Integrals
Correcting Nonparametric Frontier Measurements for Outliers
Non-parametric Jackstraw for Principal Component Analysis
Statistical Inference of Variables Driving Systematic Variation
Statistical Inference for Unsupervised Learning
Jacobi Theta Functions and Related Functions
Jaccard Index for Population Structure Identification
Supporting Files and Functions for the Book Bayesian Modelling
with 'JAGS'
A Wrapper Around rjags to Streamline JAGS Analyses
A Wrapper Around 'rjags' to Streamline 'JAGS' Analyses
Extracting and Visualizing Output from 'jagsUI'
Conversion Between Jalali (Persian or Solar Hijri) and Gregorian
Calendar Dates
Analysis Tools for the 'JAMES' Framework
Simple Tools for Examining and Cleaning Dirty Data
Directory of Open Access Journals Client
Functions for the Japanese Regional Mesh Codes ('JIS X 0410')
Just a Rather Bayesian Evidence Synthesis
Extended Classification of Weather Types
Colors Palettes for R and 'ggplot2', Additional Themes for
'ggplot2'
R Markdown Templates for Journal of Data Science
'Java' Data Exchange for 'R' and 'rJava'
A Fast and Scalable Joint Estimator for Integrating Additional
Knowledge in Learning Multiple Related Sparse Gaussian
Graphical Models
Fast Extrapolation of Time Features using K-Nearest Neighbors
One-to-One Gene-Probeset Mapping for Affymetrix Human
Microarrays
Package of the German Book "Statistik mit R und RStudio" by
Joerg grosse Schlarmann
Chinese Text Segmentation Data for jiebaR Package
Approximate Inclusion Probabilities for Survey Sampling
Just-in-time compiler for the R language
An Annotation Package for 'ggplot2' Output
Joint Latent Class Trees for Joint Modeling of Time-to-Event and
Longitudinal Data
Joint Latent Space Model for Social Networks with Multivariate
Attributes
Read from/Write to Disk Matrices with any Data Type in a Binary
Format
Joint Mean-Covariance Models using 'Armadillo' and S4
Fitting Joint Mean and Dispersion Effects Models
Joint Mean-Correlation Regression Approach for Discrete
Longitudinal Data
Fit joint model for event and censoring with cluster-level
frailties
Tools for Time Series Analysis Based on Symbolic Aggregate
Dicretization
Time Series Analysis Toolkit Based on Symbolic Aggregate
Dicretization, i.e. SAX
Time Series Analysis Toolkit Based on Symbolic Aggregate
Discretization, i.e. SAX
Permutation Tests for Nonparametric Statistics
Connect to the 'jamovi' Statistical Spreadsheet
Run Code as an RStudio Job - Free Your Console
Perform Joins or Minus Queries on 'Excel' Files
Joint modelling of repeated measurements and time-to-event data
Joint Modelling of Repeated Measurements and Time-to-Event Data
Joint Modelling of Multivariate Longitudinal Data and
Time-to-Event Outcomes
Joint Modelling for Meta-Analytic (Multi-Study) Data
Penalized Likelihood Estimation under the Joint Cox Models
Between TTP and OS for Meta-Analysis
Penalized Likelihood Estimation under the Joint Cox Models
Between Tumour Progression and Death for Meta-Analysis
Penalized Likelihood Estimation and Prediction under the Joint
Cox Models Between Tumour Progression and Death for
Meta-Analysis
Penalized Likelihood Estimation and Dynamic Prediction under the
Joint Frailty-Copula Models Between Tumour Progression and
Death for Meta-Analysis
Joint Frailty-Copula Models for Tumour Progression and Death in
Meta-Analysis
Joint Approximate Diagonalization of a set of square matrices
Joint Approximate Diagonalization of a Set of Square Matrices
Joint Mean and Covariance Estimation for Matrix-Variate Data
Joint N-Mixture Models for Site-Associated Species
Risk estimation using the joint probability method
Joint Segmentation of Multivariate (Copy Number) Signals
A package for Multilevel Joint Modelling Multiple Imputation
Multilevel Joint Modelling Multiple Imputation
A Suite of Routines for Working with Jordan Algebras
Add Josa Based on Previous Letter in Korean
Javascript Object Signing and Encryption
JavaScript Object Signing and Encryption
Journal Abbreviations for BibTeX Documents
Tool for Diagnosis of Tables Joins and Complementary Join
Features
Functions for the Grid Square Codes in Japan
Create Japanese Administration Area and Office Maps
Tools for Easy Use of 'e-Stat', 'RESAS' API, Etc
Obtain 'jQuery' as an HTML Dependency Object
Exchange Commands Between R and 'JavaScript'
Jack-Knife Support for Evolutionary Distinctiveness Indices I
and W
Item Response Theory Modeling and Scoring for Judgment Data
Basic Finance; NPV/IRR/Annuities/Bond-Pricing; Black Scholes
Create Interactive Trees with the 'jQuery' 'jsTree' Plugin
A Wrapper of the JavaScript Library 'jsTree'
'RStudio' Addins and 'Shiny' Modules for Medical Research
Parse Parameters Inside a Docker Container
A 'Base64' Encode/Decode Package with Support for JSON
Output/Input and UTF-8
Converts 'R' Objects to Javascript Object Notation (JSON)
Convert Between 'R' Objects and Javascript Object Notation
(JSON)
Convert R objects to JSON and vice versa
A Robust, High Performance JSON Parser and Generator for R
A Simple and Robust JSON Parser and Generator for R
A 'Java' Platform Integration for 'R' with Programming Languages
'Groovy', 'JavaScript', 'JRuby' ('Ruby'), 'Jython' ('Python'),
and 'Kotlin'
Create Tables from Different Types of Regression
Analyzing and Presenting Social Scientific Data
Analysis and Presentation of Social Scientific Data
Forecast Long-Term Growth of the U.S. Stock Market
Forecasting Long-Term Growth of the U.S. Stock Market
Forecasting Long-Term Growth of the U.S. Stock Market and
Business Cycles
Create a Simple Web API for your R Functions
Automated and Manual Extraction of Numerical Data from
Scientific Images
Inline CSS Properties into HTML Tags Using 'juice'
The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages
Access Open Data Through the 'Junar' API
Very Simple Function to Install Packages without Attaching
Human and Machine-Readable Justifications and Justified
Decisions Based on 'YAML'
Principal Component Analysis (PCA) and Whitening
kbest: Finds K best paths in a given graph.
k Nearest Neighbors with Grid Search Variable Selection
K-Sample Rank Tests and their Combinations
Unbiased Estimators for Cumulant Products
Unbiased Estimators for Cumulant Products and Faa Di Bruno's
Formula
Construct Complex Table with 'Kable' and Pipe Syntax
Construct Complex Table with 'kable' and Pipe Syntax
Kernel Adaptive Density Estimation and Regression
Programmatic Access to the API for Japanese Diet Proceedings
Analysis of Chronological Patterns from Archaeological Count
Data
Kernel Approaches for Nonlinear Genetic Association Regression
Kantorovich Distance Between Probability Measures
Encoding of Sequences Based on Frequency Matrix Chaos Game
Representation
Test the Homogeneity of Kappa Statistics
Sample Size Estimation Functions for Studies of Interobserver
Agreement
Non-additive measure and integral manipulation functions
Non-Additive Measure and Integral Manipulation Functions
K Adaptive Partitioning for Survival data
K-Adaptive Partitioning for Survival data
Learning programming with Karel the robot
Rendering Math to HTML, 'MathML', or R-Documentation Format
Kaya Identity Data for Nations and Regions
Kernel Change Point Detection on the Running Statistics
Kernel Smoothing for Bivariate Copula Densities
Kernel Density Estimation with Parametric Starts and Asymmetric
Kernels
Nonparametric method for identifying discordant trees
Nonparametric method for identifying discordant phylogenetic
trees
Multivariate Kernel Density Estimation with Vine Copulas
Fast Multidimensional Entropy Estimation by k-d Partitioning
Tools for Working with Multidimensional Data
Kernel Estimator and Bandwidth Selection for Density and its
Derivatives
Kernel Estimator and Bandwidth Selection for Density and Its
Derivatives
Arrays with Better Control over Dimension Dropping
Collect, Assemble and Model Air Pollution, Weather and Health
Data
Calculate solutions to Kelvin differential equation using Kelvin
functions.
Calculate solutions to Kelvin differential equation using Bessel
functions.
Calculate solutions to the Kelvin differential equation using
Bessel functions.
Calculate Solutions to the Kelvin Differential Equation using
Bessel Functions
Simulate and Visualize Kendall Random Walks and Related
Distributions
R Interface to the Keras Deep Learning Library
A High-Level R Interface for Neural Nets
Nonparametric kernel estimation of the distribution function.
Bandwidth selection and estimation of related functions.
semi-parametric kernel-based approach to local fdr estimations
Distance Weighted Discrimination (DWD) and Kernel Methods
Kernel Factory: An ensemble of kernel Machines
Kernel Factory: An Ensemble of Kernel Machines
Post-Selection Inference for Nonlinear Variable Selection
Kernel Smoothing Tools for Philology and Historical Dialectology
Spatially explicit population genetic simulations
Statistical Learning with Kernel for Persistence Diagrams
Smoothed Bootstrap and Random Generation from Kernel Densities
Kernel Estimation of Hazard Function in Survival Analysis
A Kernel Regression-Based Multidimensional Wind Turbine Power
Curve
Kernel Machine Score Test for Semi-Competing Risks
Spatio-Temporal Adaptive Kernel Estimators for Intensities
Matrix Exponential using Krylov Subspace Routines
Access the System Credential Store from R
Decrypt Passwords from Gnome Keyring and Windows Data Protection
API
Decrypt Passwords from Gnome Keyring, Windows Data Protection
API and OSX Keychain
Decrypt Passwords from Gnome Keyring, Windows Data Protection
API and macOS Keychain
K-Fold Cross Validation for Factor Analysis
Integrated Code Chunk Anchoring and Referencing for R Markdown
Documents
Kalman Filter for Impulse Noised Outliers
Colour Schemes for Archaeological Data Visualization
Colour Schemes for Scientific Data Visualization
A Simple Data Management and Sharing Tool
Kidney Functions: Clinical and Epidemiological
Functions for Behavioral Science Researchers
Simulate and Estimate Close-Kin Dispersal Kernels
Framework for the Analysis of Kinetic Visual Field Data
Routines for fitting kinetic models to chemical degradation data
Routines for Fitting Kinetic Models to Chemical Degradation Data
An Implementation of 'kinn' Algorithm, a Graph Based Regression
Model
mixed-effects Cox models, sparse matrices, and modeling data from large pedigrees
mixed-effects Cox models, sparse matrices, and modeling data
from large pedigrees
Example Data from the Multi-Modal MRI Reproducibility Resource
Example Data from the Multi-Modal MRI 'Reproducibility' Resource
Example Functional Imaging Data from the Multi-Modal MRI
Reproducibility Resource
Example Functional Imaging Data from the Multi-Modal MRI
'Reproducibility' Resource
Example T1 Structural Data from the Multi-Modal MRI
Reproducibility Resource
Example T1 Structural Data from the Multi-Modal MRI
'Reproducibility' Resource
a Keep It Simple Species Migration Model
Data Manipulation Functions Implemented in C
Model the spectral response of a closed water-well to harmonic
strains at seismic frequencies.
Spectral response of water wells to harmonic strain and pressure
Spectral Response of Water Wells to Harmonic Strain and Pressure
Signals
A Wrapper for Querying KISTERS 'WISKI' Databases via the 'KiWIS'
API
Kernel Knockoffs Selection for Nonparametric Additive Models
Classifications and Codelists for Statistics Norway
Kullback-Leibler Divergence and Other Tools to Analyze
Frequencies
Linear equations with Kronecker structure
Confidence intervals for the Kaplan-Meier estimator
Confidence Intervals for the Kaplan-Meier Estimator
Kaplan - Meier estimator with constraints for right censored
data -- a recursive computational algorithm
Kaplan-Meier Estimator with Constraints for Right Censored Data
-- a Recursive Computational Algorithm
Kaplan-Meier Simultaneous Confidence Band for the Survivor
Function
'Yinyang' K-Means and K-NN using NVIDIA CUDA
'Yingyang' K-Means and K-NN using NVIDIA CUDA
Distributed k-Means for Big Data using 'ddR' API
Fast K-Mer Counting and Clustering for Biological Sequence
Analysis
Kaplan-Meier multiple imputation for the analysis of cumulative
incidence functions in the competing risks setting
Kaplan-Meier Multiple Imputation for the Analysis of Cumulative
Incidence Functions in the Competing Risks Setting
K-Means for Longitudinal Data using Shape-Respecting Distance
Clustering longitudinal data using the likelihood as a metric of
distance
K-Means with Simultaneous Outlier Detection
A general-purpose package for dynamic report generation in R
A General-Purpose Package for Dynamic Report Generation in R
Data Language Engine for 'knitr' / 'rmarkdown'
An Accurate kNN Implementation with Multiple Distance Measures
k-nn classification with variable selection inside leaves of a tree
Nearest-neighbor classification with categorical variables
Nearest-neighbor Classification with Categorical Variables
Time Series Prediction using K-Nearest Neighbors Algorithm
(Parallel)
K Nearest Neighbor Forecasting with a Tailored Similarity Metric
Knockoff Filter for Controlling the False Discovery Rate
The Knockoff Filter for Controlled Variable Selection
Non-Uniform Memory Access ('NUMA') Optimized, Parallel K-Means
Microarray Data From Multiple Biologically Interrelated
Experiments
Text Analysis with Emphasis on POS Tagging, Readability and
Lexical Diversity
Text Analysis with Emphasis on POS Tagging, Readability, and
Lexical Diversity
Language Support for 'koRpus' Package: English
Tools for providing advice for the Tuna Regional Fisheries
Management Organisations
Tools for the provision of scientific fisheries management
advice
Get Data from the 'KOF Datenservice' API
A genetic algorithm for fixed-size subset selection
A Genetic Algorithm for Fixed-Size Subset Selection
Supervised and unsupervised self-organising maps
Supervised and Unsupervised Self-Organising Maps
An improved evaluation of Kolmogorov's distribution
An Improved Evaluation of Kolmogorov's Distribution
R Markdown Templates for the 'KOMA-Script' Classes
Simple yet Flexible Letters via the 'KOMA-Script LaTeX Bundle'
Simply Beautiful PDF Letters from Markdown
Quantify the Robustness of Causal Inferences
Variable Selection by Revisited Knockoffs Procedures
Kernel PC Algorithm for Causal Structure Detection
Determination of K Using Peak Counts of Features for Clustering
Method for Clustering Partially Observed Data
Geospatial Kriging with Metropolis Sampling
Measuring Agreement Using Krippendorff's Alpha Coefficient
A Bayesian Approach for Protein Residue Contact Prediction using
the Knob-Socket Model of Protein Tertiary Structure
Identify Kinase Substrate Relationships Using Dynamic Data
Basic Functions in Knowledge Space Theory Using Matrix
Representation
Configurable function for solving families of nonlinear
equations
Configurable Function for Solving Families of Nonlinear
Equations
k-Top Scoring Pairs for Microarray Classification
'Tweedie' Compound Poisson Model in the Reproducing Kernel
Hilbert Space
Cubic Hermite Splines and Related Optimization Methods
Cubic Hermite Splines and Related Root Finding Methods
Datasets and functions from the Faculty of Life Sciences,
University of Copenhagen
Datasets and functions from the (now non-existing) Faculty of
Life Sciences, University of Copenhagen
Data sets and functions from the Faculty of Life Sciences,
University of Copenhagen
Assistance on the National Geography of Japan
Read/Write Files in Key-Value-Hierarchy Format
Calculation of Groundwater Mounding Beneath an Infiltration
Basin
Utility Functions by Youyi, Krisz and Others
Utility Functions for Statistical Analysis Report Generation and
Monte Carlo Studies
Kolmogorov-Zurbenko Adaptive Filter for Image Detection
Multi-Scale Motions Separation with Kolmogorov-Zurbenko
Periodogram Signals
Kolmogorov-Zurbenko Fourier transform and application
Kolmogorov-Zurbenko Fourier Transform and Applications
Kolmogorov-Zurbenko Spline Smoothing and Applications
Kolmogorov-Zurbenko Spatial Smoothing and Applications
Sparse Generalized Linear Model with L0 Approximation for
Feature Selection
An L1-Version of the Spectral Clustering
Friedman's Boosting Algorithm for Regularized Linear Regression
Exploring Friedman's Boosting Algorithm for Regularized Linear
Regression
l2boost - Friedman's boosting algorithm for regularized linear
regression
Local Approximate Gaussian Process Regression
Laboratory for Dynamic Synthetic Vegephenomenology
Ordination and Multivariate Analysis for Ecology
Relabelling MCMC outputs of mixture models
Relabelling MCMC Outputs of Mixture Models
Convert labels or tables to a dendrogram
Laser Ablation Blast Through Endpoint Detection
Classify Multilingual Labour Market Free-Text to Standardized
Hierarchical Occupations
Simplex Optimization Algorithms for Laboratory and Manufacturing
Processes
Libreria Del Laboratorio Di Statistica Con R
Libreria del Laboratorio di Statistica  con R
Libreria del Laboratorio di Statistica con R
Data Sets for the Book "Experimental Design for Laboratory
Biologists"
Gliding Box Lacunarity and Other Metrics for 2D Random Closed
Sets
Laeken indicators for measuring social cohesion
Estimation of indicators on social exclusion and poverty
Estimation of Indicators on Social Exclusion and Poverty
Duncan test, Tukey test and Scott-Knott test.
An efficient kernel algorithm for rare target detection and unbalanced classification
Lake Temperatures Collected by Situ and Satellite Methods from
1985-2009
Modeling Data with Functional Programming
Tools for modeling data with functional programming
Tools for Modeling Data with Functional Programming
Variational Seq2Seq Model with Lambda Transformer for Time
Series Analysis
Create a Runtime for Serving Containerised R Functions on 'AWS
Lambda'
Log-Analytic Methods for Multiplicative Effects
Surveys of Iraq Mortality Published in The Lancet
Landmark Estimation of Survival and Treatment Effect
Automated Spatial Prediction using Ensemble Machine Learning
Landmark Prediction of a Survival Outcome
Radiometric and topographic correction of satellite imagery
Radiometric and Topographic Correction of Satellite Imagery
Landsat 8 Imagery Rescaled to Reflectance, Radiance and/or
Temperature
Landscape Metrics for Categorical Map Patterns
Data sets and functions with Analyzing Linguistic Data
Data sets and functions with "Analyzing Linguistic Data: A practical introduction to statistics".
Data sets and functions with "Analyzing Linguistic Data: A
practical introduction to statistics".
Analyzing Linguistic Data: A Practical Introduction to
Statistics
Automated Setup and Auto Run for R Language Server
Analytics, Data Mining & Machine Learning Sidekick
Serialization Interface for Large List Objects
High-Quality Visualizations of Large, High-Dimensional Datasets
Least Angle Regression, Lasso and Forward Stagewise
Likelihood Analysis of Speciation/Extinction Rates from Phylogenies
Likelihood Analysis of Speciation/Extinction Rates from
Phylogenies
Lasso-Zero for (High-Dimensional) Linear Regression
Nonparametric P-Value Estimation for Predictors in Lasso
high-dimensional inference with the penalized score test
High-Dimensional Inference with the Penalized Score Test
L1 regularized regression (Lasso) solver using the Cyclic
Coordinate Descent algorithm aka Lasso Shooting
L1 Regularized Regression (Lasso) Solver using the Cyclic
Coordinate Descent Algorithm aka Lasso Shooting
Utility for returning previous commands as unevaluated calls and
the full context of function calls.
Draws diagrams useful for checking latent scales
Draws Diagrams Useful for Checking Latent Scales
Fast Computation of Latent Correlations for Mixed Data
Functions for Graphical Model with Latent Variables
Latent position and cluster models for statistical networks
Latent Position and Cluster Models for Statistical Networks
Utilities for Delaying Function Execution
Utilities for Scheduling Functions to Execute Later with Event
Loops
Diff 'rmarkdown' Files Using the 'latexdiff' Utility
Framework for Clustering Longitudinal Data
A Framework for Clustering Longitudinal Data
Density estimation and nonparametric regression on irregular
regions
Density Estimation and Nonparametric Regression on Irregular
Regions
Extra Graphical Displays based on lattice
Extra Graphical Utilities Based on Lattice
A Lattice-based tool for exploratory visualisation
A graphical user interface for exploratory visualisation
Latent Variable Models with Censored and Binary Outcomes
Tools for Model Specification in the Latent Variable Framework
Complex survey structural equation modeling (SEM)
Complex Survey Structural Equation Modeling (SEM)
Complex survey Structural Equation Modeling (SEM)
Convenience Functions for Package 'lavaan'
Path Diagrams for Lavaan Models via DiagrammeR
Path Diagrams for 'Lavaan' Models via 'DiagrammeR'
R Client for 'Turfjs' for 'Geospatial' Analysis
Client for 'Turfjs' for 'Geospatial' Analysis
A new R package for biostatistics, public policy and law
A R package for biostatistics, public policy and law
An R package for biostatistics, public policy, and law
Tools for Biostatistics, Public Policy, and Law
Loglikelihood Adjustment for Extreme Value Models
Tilts your Maps and Turns Them into Ggplot Objects
Persistent Large Data Array with Lazy-Loading on Demand
Progress Bar with Remaining Time Forecast Method
Applying the Lazy-Greedy Spanning Algorithm
Delayed Read for 'GDAL' Vector Data Sources
Learn Computer and Data Science using Algorithmic Trading
Latent Budget Analysis for Compositional Data
Limited Memory BFGS Minimizer with Bounds on Parameters
Limited Memory BFGS Minimizer with Bounds on Parameters with
optim() 'C' Interface
Length-biased correction to survival curve estimation.
Log Binomial Regression Model in Exact Method
Implementation of Logistic Box-Cox Regression
Log-Binomial Regression with Constrained Optimization
A Bayesian Multi-Dimensional Couple-Based Latent Risk Model
Efficient Estimation of Discrete-Time Multivariate Frailty Model
Using Exact Likelihood Function for Grouped Survival Data
Estimation of various latent class mixed models and joint latent
class mixed models
Estimation of various latent class mixed models, joint latent
class mixed models and mixed models for curvilinear outcomes
Estimation of latent class mixed models, joint latent class
mixed models and mixed models for curvilinear outcomes
Estimation of extended mixed models using latent classes and
latent processes
Estimation of Extended Mixed Models Using Latent Classes and
Latent Processes
Extended Mixed Models Using Latent Classes and Latent Processes
Simple Tools to Compute Landscape Connectivity Metrics
Ordinal Outcomes: Generalized Linear Models with the Log Link
Bayesian Joint Latent Class and Regression Models
Univariate and Bivariate Latent Change Score Modeling
Local inference: local multi-collinearity tests and other tools
Local Correlation, Spatial Inequalities and other tools
Local Correlation, Spatial Inequalities and Other Tools
Local Correlation, Spatial Inequalities, Geographically Weighted
Regression and Other Tools
Design of experiments for detection of linkage disequilibrium
Collapsed Gibbs sampling methods for topic models.
Collapsed Gibbs Sampling Methods for Topic Models
Cross-validation for linear discriminate analysis
Fit Latent Dirichlet Allocation Models using Stochastic
Variational Inference
Prototype of Multiple Latent Dirichlet Allocation Runs
Multivariate Condition Matching by Backwards Elimination Using
Linear Discriminant Analysis
Selection of Statistically Similar Research Groups
Tuning of the Latent Dirichlet Allocation Models Parameters
Lan-DeMets Method for Group Sequential Boundaries
Longitudinal Drift-Diffusion Mixed Models (LDDMM)
Hidden Markov Model for Return Time-Series Based on Lambda
Distribution
Hidden Markov Model for Financial Time-Series Based on Lambda
Distribution
LD LASSO Regression for SNP Association Study
Methods for likelihood-based dimension reduction in regression
Linkage Disequilibrium Shrinkage Estimation for Polyploids
Linear Dependence Statistics for High-Dimensional Data
The Artificial Neural Networks Algorithm Leabra
Calculates the Leaf Area Index (LAD) and Other Related Functions
Silhouette to Area Ratio of Tilted Surfaces
Provides Drill Down Functionality for 'leaflet' Choropleths
High-Performance 'WebGl' Rendering for Package 'leaflet'
Create Interactive Web Maps with the JavaScript 'Leaflet'
Library
'ESRI' Bindings for the 'leaflet' Package
Extra Functionality for 'leaflet' Package
An R Gallery for China and Other Geojson Choropleth Map in
Leaflet
Interactive web-maps based on the Leaflet JavaScript library
Interactive Web-Maps Based on the Leaflet JavaScript Library
Leaflet Map Plugin for Drawing and Editing
Include Tables, Images and Graphs in Leaflet Pop-Ups
latent effect adjustment after primary projection
Latent Effect Adjustment After Primary Projection
Population Genetic Simulations & Numerical Analysis
An Implementation of Crawford's and Wright's Learning Curve
Production Functions
Data and Functions to Accompany the Book "Learning R"
Data and functions to accompany the book "Learning R".
OECD PISA Datasets from 2000-2018 in an Easy-to-Use Format
Datasets for P. J. Aphalo's "Learn R" Book
Datasets and Code Examples from P. J. Aphalo's "Learn R" Book
An Interactive Environment for Learning Statistics
Modelling Pathways and Movement Potential Within a Landscape
Modelling Pathways and Movement Potential Within a Landscape
(Version 1.7.4)
Modelling Pathways and Movement Potential Within a Landscape
(Version 1.8.0)
Utilities for Importing Data from Plaintext Accounting Files
Utilities for Importing Data from Plain Text Accounting Files
Laboratory of Teaching to Statistics and Mathematics
Historical and Ahistorical Population Projection Matrix Analysis
Phylogenetic and Functional Analyses for Ecology
Accessing Hong Kong Legislative Council API
R Bindings for the Hong Kong Legislative Council API
Interface to the Comparative Legislators Database
Grab Longitudinal Employer-Household Dynamics (LEHD) Flat Files
Implementation of the 'Python leidenalg' Module
R Implementation of Leiden Clustering Algorithm
Implements the Leiden Algorithm via an R Interface
R and C/C++ Wrappers to Run the Leiden find_partition() Function
Laplace approximated EM Microarray Analysis
Create Simple 'Shiny' Applications as Packages
Access Landscape Evaporative Response Index Raster Data
Vectorised Nested if-else Statements Similar to CASE WHEN in
'SQL'
Tools for data handling and analysis in macroecology
Tools for Data Handling and Analysis in Macroecology
Data Handling and Analysis in Macroecology
Utilities for Formatting Strings with Consistent Capitalization,
Word Breaks and White Space
Extractive Summarization of Text with the LexRank Algorithm
Log Fold Change Distribution Tools for Working with Ratios of
Counts
Calculates Low Flow Statistics for daily stream flow data
Calculation of Low Flow Statistics for daily stream flow data
Calculation of Low Flow Statistics for Daily Stream Flow Data
Locally Gaussian Distributions: Estimation and Methods
Tools for linear grouping analysis (LGA)
Simulation and estimation of log-GARCH models
Simulation and Estimation of Log-GARCH Models
Example Datasets for a Learning Guide to R
A set of methods for longitudinal data objects.
A Set of Methods for Longitudinal Data Objects
Fit Sex-Specific Life History Models with Missing
Classifications
Locally Induced Gaussian Process Regression
Linking Singe-Cell Transcriptomes Atween Contemporary
Subpopulation Genomes
Computational routines for proton and ion radiotherapy
Computational Routines for Proton and Ion Radiotherapy
Various Utilities for Library Science/Assessment and Cataloging
Linear Test Statistics for Permutation Inference
Open Source Geometry Engine ('GEOS') C API
Generic Coordinate Transformation Library ('PROJ') C API
Libraries, Data Dictionaries, and a Data Step for R
Install, Update, Load Packages from CRAN and 'GitHub' in One
Step
Install, Update, Load Packages from CRAN, 'GitHub', and
'Bioconductor' in One Step
Library Snapshot for Packages and Dependencies in Use by Current
Session
Read, Create and Write 'PharmML' Standard Output (so) XML Files
Fast and Accurate Evaluation, Random Number Generation and
Parameter Estimation of Skew Stable Distributions
Airborne LiDAR Data Manipulation and Visualization for Forestry
Applications
Forest Analysis with Airborne Laser Scanning (LiDAR) Data
Package to perform actuarial evalutation of life contingencies
Package to perform actuarial evaluation of life contingencies
Package to perform actuarial mathematics for life contingencies
insurances
A package to perform actuarial mathematics for life
contingencies insurances
Financial and Actuarial Mathematics for Life Contingencies
Manage the Life Cycle of your Package Functions
Compute the Top Decile Lift and Plot the Lift Curve
Wavelet Lifting Estimators of the Hurst Exponent for Regularly
and Irregularly Sampled Time Series
Containerize R Markdown Documents for Continuous Reproducibility
Implementation of the 'Lights Out' Puzzle Game
Tools to determine DNA profile evidence.
Methods for maximum likelihood estimation
Methods for Maximum Likelihood Estimation
Likelihood Analyses for Common Statistical Tests
Functions to analyze and visualize likert type items
Functions to Analyze and Visualize Likert Type Items
Metabolomics Personalized Pathway Analysis Tool
Multivariate Data Visualization with Tours and Embeddings
Jitter/Box Plot with Ordered Points Below the Limit of Detection
Jitter/CI Plot with Ordered Points Below the Limit of Detection
Working with 'LimeSurvey' Surveys and Responses
Differential Analysis of Rhythmic Transcriptome Data
Quantify Rhythmicity and Differential Rhythmicity in Genomic
Data
Perform Polynomial Evaluation of Linearity
Binning and Plotting of Linearly Referenced Data
Sampling Multivariate Normal Distribution under Linear
Constraints
Manipulate Formulas and Evaluate Marginal Effects
Linear Algorithm for Simulating Quantiles in Multiscale
Change-Point Segmentation Problem
Tagging and Validating Epidemiological Data
Gaussian Process Regression Models with Linear Inequality
Constraints
'HTMLWidget' Wrapper of 'LineUp' for Visual Analysis of
Multi-Attribute Rankings
Linguistic Examples and Abbreviation Lists Generation
Interlinear Glossed Linguistic Examples and Abbreviation Lists
Generation
Easy Linguistics Document Writing with R Markdown
Linking GIS, Remote Sensing and Other Command Line Tools
Linking Geographic Information Systems, Remote Sensing and Other
Command Line Tools
Tools for Generating, Visualizing, and Analysing Link
Communities in Networks
Access to 'LinkedIn' Ads via the 'Windsor.ai' API
Linkage information based genotype imputation method
Bivariate Correlations Calculation and Visualization
Generate Concentration-Time Profiles from Linear PK Systems
Manipulation of Linear Systems of (in)Equalities
Integrative Visualizations of the Lipidome
Implements Queue, PriorityQueue and Stack Classes
Fitting lasso penalised additive isotone models
Multivariate Statistical Analysis for the Item Count Technique
Multivariate Statistical Analysis for List Experiments
Statistical Methods for the Item Count Technique and List
Experiments
Statistical Methods for the Item Count Technique and List
Experiment
Incomplete Array with Arbitrary R Objects as Indices
A Toolbox for Working with R Arrays in a Functional Programming
Style
List-Based Rules for Dynamic Treatment Regimes
'htmlwidget' for Interactive Views of R Lists
Dataset and Tools to Research the Riddle of Literary Quality
Likelihood-Based Inference for Time Series Extremes
Lightweight Portable Message Queue Using 'SQLite'
Fit a Collection of Curves to Single Cohort Decomposition Data
Liu Regression with Liu Biasing Parameters and Statistics
Local Interpretable (Model-Agnostic) Visual Explanations
Leveraging Learning to Automatically Manage Algorithms
Local Log-linear Models for Capture-Recapture
Add standardized regression coefficients to lm objects
Add Standardized Regression Coefficients to lm-Objects
Linear Fixed Effects Models for Diallel Crosses
An Algorithm for Gene Co-Expression Analysis
Exact Variable-Subset Selection in Linear Regression
Linear Model Bias Correction for RNA-Seq Data
Linear mixed-effects models using S4 classes
Linear mixed-effects models using Eigen and S4
Linear Mixed-Effects Models using 'Eigen' and S4
Information Matrices for 'lmeStruct' and 'glsStruct' Objects
Fit negative binomial mixed-effect regression model.
Compute the Personalized Activity Index Based on a Negative
Binomial Model
Sample from the posterior of the negative binomial mixed-effect
regression model. The random effect is modeled with DP mixture
of beta distributions.
Compute the Personalized Activity Index Based on a Flexible
Bayesian Negative Binomial Model
Compute the Personalized Activity Index via flexible Bayesian
Negative Binomial model.
Add smoothing spline modelling capability to nlme.
Add Smoothing Spline Modelling Capability to `nlme`
Testing for a subset of variance components in linear mixed
models
Testing for a Subset of Variance Components in Linear Mixed
Models
Linear Mixed-Effects Models with Censored Responses
Linear Mixed Effects Models for Genome-Wide Association Studies
Linear Mixed Effects Models for QTL Mapping for Multienvironment
and Multitrait Analysis
Linear Mixed Effects Models with Non-stationary Stochastic
Processes
Linear Mixed Effects Models with Non-Stationary Stochastic
Processes
Tests for random and fixed effects for linear mixed effect
models (lmer objects of lme4 package).
Bootstrap Methods for Nested Linear Mixed-Effects Models
Functions for estimation and inference of selection in
age-structured populations
Functions for Estimation and Inference of Selection in
Age-Structured Populations
Tools to Visualize and Screen 2D/3D Landmark Data
Goodness-of-fit-measures for linear mixed models with
one-level-grouping
Linear mixed effect model splines for modelling and analysis of
time course data
Linear Mixed Effect Model Splines for Modelling and Analysis of
Time Course Data
(Precipitation) Frequency Analysis and Variability with
L-Moments from 'lmom'
Regional frequency analysis using L-moments
Regional Frequency Analysis using L-Moments
L-moments, L-comoments, Trimmed L-moments, and Distributions
L-moments, Trimmed L-moments, L-comoments, and Distributions
L-moments, Trimmed L-moments, L-comoments, and Many Distributions
L-moments, Trimmed L-moments, L-comoments, and Many
Distributions
L-moments, Trimmed L-moments, L-comoments, Censored L-moments,
and Many Distributions
L-moments, Censored L-moments, Trimmed L-moments, L-comoments,
and Many Distributions
L-Moments, Censored L-Moments, Trimmed L-Moments, L-Comoments,
and Many Distributions
Data and Functions Used in Linear Models and Regression with R:
An Integrated Approach
Linear Ridge Regression with Ridge Penalty and Ridge Statistics
Non-Parametric Causal Effects of Feasible Interventions Based on
Modified Treatment Policies
Linear Regression with Non-Constant Variances
A Package to Visualize Linear Models Features and Play with Them
Logistic-Normal Model for Clustered Binary (Binomial) Data
Marginally specified logisti normal models for longitudinal binary data
Long Non-Coding RNA Differential Expression Analysis
Perform Logistic Normal Multinomial Clustering for Microbiome
Compositional Data
loa: various plots, options and add-ins for use with lattice
Explore Intra-Event Suspended Sediment Dynamics
Loadings for Principal Component Analysis and Partial Least
Squares
Cleaner Workspaces with Shared Variable Environments
Producing Load Shape with Target Peak and Load Factor
Fast Implementation of (Local) Population Stratification Methods
Localization Processes for Functional Data Analysis
Estimation of Marginal Treatment Effects using Local
Instrumental Variables
LIME-Based Explanations with Interpretable Inputs Based on
Ceteris Paribus Profiles
Package for Sequence Analysis by Local Score
Detection and Localization of Executable Files
Identification of Location Game Equilibria in Networks
Local Regression, Likelihood and Density Estimation.
Local Regression, Likelihood and Density Estimation
Test of stationarity and localized autocovariance
Test of Stationarity and Localized Autocovariance
Genome-Wide Association Analysis of a Biomarker Accounting for
Limit of Detection
Dependency-Free Access to PNG Image Files
Limit of Detection Imputation for Single-Pollutant Models
Linear Model Fitting with LOD Covariates
Data Sets from "Lectures on Econometrics" by Chirok Han
Decimal log plotting in two and three dimensions
A simple logging system for R, based on log4j.
A Simple Logging System for R, Based on 'log4j'
A Fast and Lightweight Logging System for R, Based on 'log4j'
Computing Log-Transformed Kernel Density Estimates for Positive
Data
Natural Logarithms of the Gamma Function for Large Values
Relative Risk Regression Using the Log Binomial Model
Relative Risk Regression Using the Log-Binomial Model
CoxPH Model with Log Concave Baseline Distribution
Maximum likelihood estimation of a log-concave density based on
censored data
Maximum Likelihood Estimation of a log-Concave Density Based on
Censored Data
Maximum Likelihood Estimation of a Log-Concave Density Based on
Censored Data
Estimate a Log-Concave Probability Density from i.i.d. Observations
Estimate a Log-Concave Probability Density from iid Observations
Estimate a Log-Concave Probability Density from Iid Observations
Compute MLE of Log-Concave Density on R with Fixed Mode, and
Perform Inference for the Mode.
Estimate a Log-Concave Probability Mass function from Discrete
i.i.d. Observations
Estimate a Log-Concave Probability Mass Function from Discrete
i.i.d. Observations
A Lightweight, Modern and Flexible Logging Utility
Binning Variables to Use in Logistic Regression
Salary Analysis by the Swiss Federal Office for Gender Equality
Identifying Interactions Between Binary Predictors
Analysis of sparse contingency tables with penalization approaches
Firth's bias reduced logistic regression
Exact logistic regression including Firth correction
Logistic Regression with Misclassification in Dependent
Variables
Adjusted Relative Risk from Logistic Regression
Functional Principal Components Logistic Regression
Fitting l2-regularized logit choice models via generalized
gradient descent
Functions for the logitnormal distribution.
Functions for the Logitnormal Distribution
Logit Models w/Preference & WTP Space Utility Parameterizations
Double log normal distribution functions
Double Log Normal Distribution Functions
Log-multiplicative models, including association models
Log-Multiplicative Models, Including Association Models
Functions for the Lognormal Distribution
A Logging Utility Focus on Clinical Trial Programming Workflows
Routines for Logspline Density Estimation
Kernel Regression Smoothing with Local or Global Plug-in Bandwidth
Kernel Regression Smoothing with Local or Global Plug-in
Bandwidth
Linear Optimal Low-Rank Projection (LOL)
Longitudinal Dataframes into Arrays for Machine Learning
Training
Package for Plotting Categorical Longitudinal and Time-Series
Data
Time-Dependent Prognostic Accuracy with Multiply Evaluated Bio
Markers or Scores
Recursive partitioning of longitudinal data using mixed-effects models
Recursive partitioning of longitudinal data using mixed-effects
models
Recursive Partitioning of Longitudinal Data
Model-Based Clustering and Classification for Longitudinal Data
High Dimensional Longitudinal Data Analysis Using MCMC
Statistics for Long-Memory Processes (Jan Beran) -- Data and Functions
Statistics for Long-Memory Processes (Jan Beran) -- Data and
Functions
Statistics for Long-Memory Processes (Book Jan Beran), and
Related Functionality
Longitudinal Consensus Clustering with 'flexmix'
Sample size calculations for longitudinal data
Sample Size Calculations for Longitudinal Data
Expand Short URLs Using the 'LongURL' API
Expand Short URLs Using the 'URL-Expander' API
Efficient Leave-One-Out Cross-Validation and WAIC for Bayesian
Models
Leave One Out Kernel Density Estimates for Outlier Detection
Data Used to Illustrate 'Loon' Functionality
Making 'ggplot2' Plots Interactive with 'loon' and Vice Versa
Automatically Create a 'Shiny' App Based on Interactive 'Loon'
Widgets
A package for performing loop decomposition of weighted directed
graphs in life cycle analysis, providing general network
plotting methods, and analyzing food chain properties in
ecology.
loop decomposition of weighted directed graphs for life cycle
analysis, providing flexbile network plotting methods, and
analyzing food chain properties in ecology
Uses an Archive to Amend Previous Stages of a Pipe using Current
Output
Set of Functions to Use in Survival Analysis and in Data Science
Tools for Survival Analysis and Data Science
Logistic Regression Differential Item Functioning using IRT
Logistic Ordinal Regression Differential Item Functioning using
IRT
LOw Rand and sparsE Covariance matrix estimation
The Lorentz Transform in Relativistic Physics
Tools for Deriving Income Inequality Estimates from Grouped
Income Data
Low-Rank Interactions in Count Data with Covariates
Imputation of Count Data using Side Information
Imputation of High-Dimensional Count Data using Side Information
A Simple Way to Specify Symmetric, Block Diagonal Matrices
Interface to Lp_solve to solve linear/integer programs
Interface to Lp_solve v. 5 to solve linear/integer programs
Interface to Lp_solve v. 5.5 to solve linear/integer programs
Interface to 'Lp_solve' v. 5.5 to Solve Linear/Integer Programs
R Interface for lp_solve version 5.5.2.0
R Interface to 'lp_solve' Version 5.5.2.0
Lassoed principal components for testing significance of
features
Lassoed Principal Components for Testing Significance of
Features
Lassoed principal components for testing significance of features
Boundary Adaptive Local Polynomial Conditional Density Estimator
Local Polynomial Density Estimation and Inference
Ecological Inference by Linear Programming under Homogeneity
Local polynomial esitmators of intensity function or its
derivatives
Local polynomial estimators of intensity function or its
derivatives
Local Polynomial Estimators of the Intensity Function and Its
Derivatives
Local Projections Impulse Response Functions
Local Partial Likelihood Estimation and Simultaneous Confidence
Band
'dplyr' Verbs for Lists and Other Verbs for Data Frames
Local Polynomial Estimator in Measurement Error Models
Local Polynomial Estimators in Measurement Error Models
Nonparametric Estimation of Measurement Error Models
Modeler for linear programs (LP) and mixed integer linear
programs (MILP)
A Package for Processing Lexical Response Data
Sources an R "Module" with Caching & Encapsulation, Returning
Exported Vars
Different types of estimators to deal with multicollinearity.
Different Types of Estimators to Deal with Multicollinearity
Power and Sample Size Calculation for Non-Proportional Hazards
Functions to Facilitate the Simulation of Large Scale Assessment
Data
Functions to Facilitate the Simulation of Large-Scale Assessment
Data
Least-Squares Bilinear Clustering for Three-Way Data
Bandwidth Selection for Level Sets and HDR Estimation
Solving Least Squares Problems under Equality/Inequality
Constraints
Solving Least Squares or Quadratic Programming Problems under
Equality/Inequality Constraints
Linear Multiple Output Sparse Group Lasso
Semi-Confirmatory Structural Equation Modeling via Penalized
Likelihood
Semi-Confirmatory Structural Equation Modeling via Penalized
Likelihood or Least Squares
Estimation of the log Likelihood of the Saturated Model
Nonparametric Estimation and Inference Procedures using
Partitioning-Based Least Squares Regression
Linear Splines with Convenient Parametrisations
Classification using LS-PLS for Logistic Regression
Companion to "Learning Statistics with R"
Companion package to "Learning Statistics with R"
the accelerated failure time model to right censored data based on least-squares principle
the accelerated failure time model to right censored data based
on least-squares principle
The Accelerated Failure Time Model to Right Censored Data Based
on Least-Squares Principle
Simulation-Based Bayesian Inference for Latent Traits of Item
Response Models
Left-Truncated Mixtures of Gamma, Weibull, and Lognormal
Distributions
Longitudinal Targeted Maximum Likelihood Estimation
Ridge and Liu Estimates based on LTS (Least Trimmed Squares)
Method
Sparse Principal Component Based on Least Trimmed Squares
Lightweight Sparklines for a LaTeX Document
Likelihood Under Covariate Assumptions (LUCA)
Likelihood inference from case-control data Under Covariate Assumptions (LUCA)
Likelihood inference from case-control data Under Covariate
Assumptions (LUCA)
Likelihood Inference from Case-Control Data under Covariate
Assumptions
Package to Download and Create the DB of LUCAS Data Harmonized
Lucid Printing of Floating Point Numbers
Printing Floating Point Numbers in a Human-Friendly Format
Light Use Efficiency Model to Estimate Biomass
Light Use Efficiency Model to Estimate Biomass and YIELD with
and Without Vapour Pressure Deficit
Lunar Phase & Distance, Seasons and Other Environmental Factors
Calculate Lunar Phase & Distance, Seasons and Related
Environmental Factors
Stochastic EM Algorithms for Latent Variable Models with a
High-Dimensional Latent Space
Bindings to Selected 'liblwgeom' Functions for Simple Features
Accurate Estimation of Clonal Coincidences and Abundances from
Biological Replicates
Movement to Behaviour Inference using Random Forest
Package About Data Manipulation in Pure Base R
functions for multivariate AutoRegressive analysis
Multivariate Bayesian Variable Selection Method Exploiting
Dependence among Outcomes
Bayesian Variable Selection Methods for Multivariate Data
Inferring Causal Network from Mixed Observational Data Using a
Directed Acyclic Graph
Identifying Master Gene Regulators from Gene Expression and
DNA-Binding Data
Compute and Illustrate the Multiple Facets of Functional
Diversity
Leadership-Inference Framework for Multivariate Time Series:
'mFLICA'
Leadership-Inference Framework for Multivariate Time Series
Gene set analysis based on GSZ-scoring function and asymptotic
p-value
Multilevel Hidden Markov Models Using Bayesian Estimation
Processing of Accelerometry Data with 'GGIR' in mMARCH
Implementation of Marker-Assisted Mini-Pooling with Algorithm
Metabolomic Quantitative Trait Locus Mapping
R package for parallelized mRMR ensemble feature selection
Parallelized Minimum Redundancy, Maximum Relevance (mRMR)
Ensemble Feature Selection
"Parallelized Minimum Redundancy, Maximum Relevance (mRMR)
Ensemble Feature Selection"
Parallelized Minimum Redundancy, Maximum Relevance (mRMR)
Numerical Tools for Filling Out an NCAA Basketball Tournament
Bracket
mRm: An R package for conditional maximum likelihood estimation
in mixed Rasch models.
An R package for conditional maximum likelihood estimation in
mixed Rasch models.
An R Package for Conditional Maximum Likelihood Estimation in
Mixed Rasch Models
Multiple Testing of Local Extrema for Detection of Change Points
Micro Simulation Model for Cervical Cancer Prevention
A Graphical User Interface for Microarray Data Analysis
A Graphical User Interface for Microarray Data Analysis and
Annotation
Mandallaz' model-assisted small area estimators
Mandallaz' Model-Assisted Small Area Estimators
Tools for analyzing Micro Array experiments
Maximum Approximate Bernstein Likelihood Estimation
Maximum Approximate Bernstein/Beta Likelihood Estimation
Binary and Multiclass Boosting Algorithms
Mediation Analysis of Causality under Confounding
Machina Time Series Generation and Backtesting
Retrieve Data from MacLeish Field Station
Measures of Uncertainty for Model Selection
Colombian Macro-Financial Time Series Generator
Recursive Partitioning Based Multivariate Adaptive Regression
Models, Classification Trees, Survival Trees
Mediation Analysis for Count and Zero-Inflated Count Data
Meta-Analysis of Diagnostic Accuracy (mada)
'MADGRAD' Method for Stochastic Optimization
Fast Data Aggregation, Modification, and Filtering with Pipes
and 'data.table'
Automatic Differentiation of Multivariate Operations
May All Data be Reproducible and Transparent (MADRaT) *
A Flexible Microarray Data Simulation Model
Data Class and Tools for Handling Spatial-Temporal Data
Pretty scientific plotting with minor-tick and log minor-tick
support
Pretty Scientific Plotting with Minor-Tick and log Minor-Tick
Support
Pretty Scientific Plotting with Minor-Tick and Log Minor-Tick
Support
Magic Functions to Obtain Results from for Loops
Advanced Graphics and Image-Processing in R
GUI Tools for Interactive Image Processing with 'magick'
Matrix Algebra on GPU and Multicore Arcitectures
Matrix Algebra on GPU and Multicore Architectures
R-Client for 'Magma' of the 'UCSF Mount Etna Data Library'
Implements the O'Connell-Dobson-Schouten Estimators of Agreement
for Multiple Observers
magrittr - a forward-pipe operator for R
Assessing the Numerical Feasibility for Conducting a
Matching-Adjusted Indirect Comparison (MAIC)
Get Mailchimp Data via the 'Windsor.ai' API
Mail Merge Using R Markdown Documents and 'gmailr'
Creates a Friendly User Interface for Emails Sending in 'shiny'
R Interface to Access the 'Majestic' API
Transform Serial R Code into Parallel R Code
Creates an empty package framework for the LCFD format
Package for managing projects with multiple versions derived
from a single source repository.
Create Dummy Variables from Categorical Data
Intuitive Construction of Joint Priors for Variance Parameters
Literate Programming with Make and Sweave
Exploring and Testing the Toolchain and System Libraries
Machine Learning Assisted Network Inference
EM Estimation of Malaria Haplotype Probabilities from Multiply
Infected Human Blood Samples
An R Interface to Open-Access Malaria Data, Hosted by the
'Malaria Atlas Project'
A wrapper around the Java machine learning tool MALLET
An R Wrapper for the Java Mallet Topic Modeling Toolkit
Islas Malvinas, Georgias Del Sur y Sándwich Del Sur
Multivariate Analysis for Neuroimaging Data
Multiple Allocation Model for Actor-Event Networks
Interactive Q-Q and Manhattan Plots Using 'plotly.js'
Access and Process Data and Documents of the Manifesto Project
Add Even More Interactivity to Interactive Charts
Mediation, Moderation and Moderated-Mediation After Model
Fitting
Tools for Matrix Algebra, Optimization and Inference
Producing Administrative Boundary Map with Additional Features
Embedded
mapReduce - flexible mapReduce algorithm for parallel
computation
Geographic display of survey data statistics
Geographic Display of Survey Data Statistics
MAP-Bayesian Estimation of PK Parameters
Tools for Plotting Canadian Choropleth Maps and Choropleth
Alternatives
China Administrative Divisions Geospatial Shapefile Data
Interactive Maps Using 'Mapbox GL JS' and 'Deck.gl'
Interactive Editing of Spatial Data in R
Construct Consensus Genetic Maps and Estimate Recombination
Rates
Create Contour Polygons from Regular Grids
Bayesian Analysis of Multi-Sample Spatial Transcriptomics
Experiments
Efficient Monitoring of Global Biodiversity Portfolios
Automatic Download, Linking, Manipulating Coordinates for Maps
Functions for Transforming Categorical Variables
Local Adaptation and Evaluation of Digital Soil Maps
'sf'-Compatible Interface to 'Google Maps' APIs
Print Maps, Draw on Them, Scan Them Back in
tools for reading and handling shapefiles
Maptools: tools for reading and handling shapefiles
Tools for reading and handling spatial objects
Tools for Reading and Handling Spatial Objects
Mapping, pruning, and graphing tree models
Mapping, Pruning, and Graphing Tree Models
Interactive Viewing of Spatial Objects in R
Interactive Viewing of Spatial Data in R
Multiplicative AR(1) with Seasonal Processes
The Maraca Plot: Visualization of Hierarchical Composite
Endpoints in Clinical Trials
Migration and Range Change Estimation in R
Datasets, constants, conversion factors, utilities for the marine and lacustrine sciences
Datasets and tutorials for use in aquatic sciences
Approximate marginal inference for regression-scale models
Approximate Marginal Inference for Regression-Scale Models
Marginal Likelihood Computation via Arrogance Sampling
Log Marginal Likelihood of Gaussian Mixture
marginTree: margin trees for high-dimensional classification
Marginal Effects, Marginal Means, Predictions, and Contrasts
Marine Ecosystem and Fishing Pressure Indicators
Benchmark Data Sets and Functions for Marine Species
Distribution Modelling
Render Markdown with the C Library 'Sundown'
Shiny Module for a Markdown Input with Result Preview
Mark-Recapture Analysis for Survival and Abundance Estimation
Power calculation for marker detection strategies in Genome-wide
Association Studies
Marker Gene Detection via Penalized Principal Component Analysis
Enhanced Analytics for Marketers Navigating the Ocean of Web
Data
Tidy Calculation of Marketing Metrics Plus Quick Analysis
Markov Chain Models for Phylogenetic Trees
Methods for Checking the Markov Condition in Multi-State
Survival Data
Package to perform discrete Markov chain analysis
A package to handle and analyze discrete Markov chains
A package to handle and analyse discrete Markov chains
Easy Handling Discrete Time Markov Chains
Multivariate Analysis Based on Relative Likelihoods
Import, plot and analyze bathymetric and topographic data
Import, Plot and Analyze Bathymetric and Topographic Data
An algorithm for least-squares curve fitting
A Parallelized Algorithm for Least-Squares Curve Fitting
A Parallelized General-Purpose Optimization Based on
Marquardt-Levenberg Algorithm
Build Data Structures for Common Statistical Analysis
Competitive Gene Sets Test with the Mann-Whitney-Wilcoxon Test
Optimal Multilevel Matching using a Network Algorithm
An R package for the analysis of stable matchings
An R Package for the Analysis of Stable Matchings
Structural Estimators and Algorithms for the Analysis of Stable
Matchings
Pattern Matching and Enumerated Types in R
A Code Converter from the Matlab/Octave Language to R
Tools to Assess Mating Potential in Space and Time
Support for the 'Mathpix' API (Image to 'LaTeX')
Mapping Transitions in Continuous Character Evolution
Measuring Association and Testing Independence Efficiently
An Interface for MATLAB using System Calls
Matrix Functions for Teaching and Learning Linear Algebra and
Multivariate Statistics
Normalized Laplacian Matrix and Laplacian Map
Methods that apply to rows and columns of a matrix
Methods that Apply to Rows and Columns of a Matrix
Methods that Apply to Rows and Columns of Matrices (and to
Vectors)
Functions that Apply to Rows and Columns of Matrices (and to
Vectors)
Tests of Matrix Structure for Construct Validation
Fast Statistical Hypothesis Tests on Rows and Columns of
Matrices
Collection of functions for matrix differential calculus
Collection of functions for matrix calculations
Collection of Functions for Matrix Calculations
Matrix-based Partial Least Squares estimation
Matrix-Based Partial Least Squares Estimation
Simulations of Matrix Variate Distributions
Decision Models with Multi Attribute Utility Theory
Maximum Likelihood Estimation and Related Tools
Conditional Samplings for Max-Linear Models
The Group Sequential Max-Combo Test for Comparing Survival
Curves
Text Classification Using Low-memory Multinomial Logistic
Regression
Low-memory Multinomial Logistic Regression with Support for Text
Classification
Sequential Space-Filling Design under the Criterion of Maximin
Distance
Space-Filling Design under Maximin Distance
Estimate probability of occurrence using presence-only data.
Model species distributions by estimating the probability of
occurrence using presence-only data.
Model Species Distributions by Estimating the Probability of
Occurrence Using Presence-Only Data
Maximum Matching for General Weighted Graph
Fitting 'Maxent' Species Distribution Models with 'glmnet'
Approximate Maximisation of Nestedness in Bipartite Graphs
Maximally Selected Rank- and Gauss Statistics
Monotonic Association on Zero-Inflated Data
Integrating Multiple Biomarker Responses using Estimation
Statistics
Integrating Multiple Biomarker Responses in Aquatic Organisms
using Effect Size, Statistical Uncertainty, and Ecological
Relevance
Exploration of Multiple Biomarker Responses using Effect Size
Maxwell Bolzano Bose Einstein Fermi Dirac Distribution and
Exposure Curve
Maxwell Bolzano Bose Einstein Fermi Dirac distribution and
exposure curve
Maxwell Boltzmann Bose Einstein Fermi Dirac Distribution and
Destruction Rate Modelling
Moment-Based Estimation for Hierarchical Models
Model Based Multifactor Dimensionality Reduction
Gradient Boosting for Fitting Generalized Linear, Additive
and Interaction Models
Reading, Extracting, and Converting an Mbox File into a Tibble
Median Bias Reduction in Binomial-Response GLMs
Multivariate Bayesian Structural Time Series
A Monte Carlo Based Heterogeneity Test for Meta-Analysis
Tools for Two-Dimensional Monte-Carlo Simulations
Monte Carlo Based Tests for the Behrens Fisher Problem as an
Alternative to Welch's t-Approximation
Global optimization using Monte Carlo and Quasi Monte Carlo
simulation
IRT models for multiple choice items (mcIRT)
A Toolbox for the Multi-Criteria Minimum Spanning Tree Problem
Estimating Node Fitness from a Single Network Snapshot by Markov
Chain Monte Carlo
Estimating Preferential Attachment from a Single Network
Snapshot by Markov Chain Monte Carlo
Visualize Results of Statistical Hypothesis Tests
Matrix Computation Based Identification Of Prime Implicants
Matrix Computation Based Identification of Prime Implicants
Visualizing Class Specific Heterogeneous Tendencies in
Categorical Data
Creates the MCC-F1 Curve and Calculates the MCC-F1 Metric and
the Best Threshold
Estimating Parameters for a Matched Case Control Design with a
Mismeasured Exposure using Instrumental Variables
Analysis of Matched Case Control Data with a Mismeasured
Exposure that is Accompanied by Instrumental Variables
Maximum Likelihood Estimation for Generalized Linear Mixed
Models
Machine Coded Genetic Algorithms for the Real Value Optimization
Problems
Machine coded genetic algorihms for real-valued optimization
problems
Machine coded genetic algorithms for real-valued optimization
problems
Machine Coded Genetic Algorithms for Real-Valued Optimization
Problems
Mixtures of Contaminated Gaussian Factor Analyzers
Warnes and Raftery's MCGibbsit MCMC diagnostic
Multivariate Covariance Generalized Linear Models
Estimating Conditional Auto-Regressive (CAR) Models using Monte
Carlo Likelihood Methods
Estimating Conditional Auto-Regression (CAR) Models using Monte
Carlo Likelihood Methods
Multinomial Logit Models, with or without Random Effects or
Overdispersion
Model-Based Clustering / Normal Mixture Modeling
Normal Mixture Modeling for Model-Based Clustering,
Classification, and Density Estimation
Normal Mixture Modelling for Model-Based Clustering,
Classification, and Density Estimation
Gaussian Mixture Modelling for Model-Based Clustering,
Classification, and Density Estimation
Model-based cluster analysis (older version)
Functions to Store, Manipulate and Display Markov Chain Monte
Carlo (MCMC) Output
Flexible Implementation of a Structural MCMC Sampler for DAGs
Ensemble Sampler for Affine-Invariant MCMC
Markov Chain Monte Carlo Small Area Estimation
Multiple criteria optimization algorithms and related functions
Multiple Criteria Optimization Algorithms and Related Functions
Multi criteria optimization algorithms and related functions
Objects and Methods for Multi-Companion Matrices
A Simplified Interface for Running Commands on Parallel
Processes
Tools to analyse and use passport data for biological
collections.
Testing Generalized Linear Hypotheses for Generalized Linear
Model Parameters by Profile Deviance
Functions for Monte Carlo Methods with R
Tools to Process the Munich ChronoType Questionnaire (MCTQ)
Selecting Bandwidth for Kernel Density Estimator with Minimum
Distance Method
Produces Markdown Log File with a Built-in Function Call
Mixture and flexible discriminant analysis
Mixture and Flexible Discriminant Analysis
Multivariate Data Analysis for Chemometrics
Multivariate data analysis for chemometrics
Measuring the difference between two empirical distributions
Measuring the Difference Between Two Empirical Distributions
Variable-Group Methods for Agglomerative Hierarchical Clustering
Missing Data Imputation Using Gaussian Copulas
Multivariate Double Hierarchical Generalized Linear Models
Graph-Constrained Regression with Enhanced Regularization
Parameters Selection
Searching for Optimal MDS Procedure for Metric Data
Searching for Optimal MDS Procedure for Metric and
Interval-Valued Symbolic Data
Searching for Optimal MDS Procedure for Metric and
Interval-Valued Data
Improved Score Tests for Generalized Linear Models
Functions for Analysis of Data with General Recognition Theory
Complement to 'Modern Data Science with R'
Statistical Trending for Medical Devices Surveillance
A Computationally Efficient Mean Shift Implementation
Meanscore method for missing covariate data in logistic regression models
Make Quick Descriptive Tables for Continuous Variables
Detection and Control of Tree-Ring Widths on Scanned Image
Sections of Dendrochronological Samples
Detection and Control of Tree-Ring Widths on Scanned Image
Sections
Send Data from R to the Measurement Protocol
Performance Measures for Statistical Learning
Maximum Entropy Bootstrap for Time Series
Multivariate Empirical Cumulative Distribution Functions
Compare Microbial Networks of 'trans_network' Class of
'microeco' Package
Measurement Error Correction in Linear Models with a Continuous
Outcome
Medication Adherence: Commonly Used Definitions
Extraction of Medication Information from Clinical Text
A max-margin supervised Sparse Topical Coding Model
Large Scale Single Mediator Hypothesis Testing
Bayesian Methods for Identifying the Most Harmful Medication
Errors
Flexible Mediation Analysis using Natural Effect Models
Flexible Mediation Analysis Using Natural Effect Models
Mediation Analysis Based on the Product Method
Simulation-Based Sensitivity Analysis for Causal Mediation
Studies
Medical Risk and Comorbidity Tools for ICD-9-CM Data
Tools for Obtaining and Cleaning Medicare Public Use Files
Prints a Random Quote from Marcus Aurelius' Book Meditations
Simple Mediation and Moderation Analysis
Access and Search MedRxiv and BioRxiv Preprint Data
Macroeconomic Expectations Data in R using the Central Bank of
Brazil API
Analysis of Data with Measurement Error Using a Validation
Subsample
Faunistic count data handling and reporting
Multivariate count data handling in ecology and biogeography
Multivariate Count Data Handling in Ecology and Biogeography
Multivariate Data Handling in Ecology and Biogeography
Multivariate Data Handling with S4 Classes and Sparse Matrices
Interactive model exploration using GGobi
Interactive Model Exploration using 'GGobi'
Statistical Methods for the Quantitative Analysis of Song
Spectrograms
Matching Event Data by Location, Time and Type
View and Classify MELODIC Output for ICA+FIX
The Moving Epidemics Method Shiny Web Application
The Moving Epidemic Method Web Application
Spatial pattern detection in genetic distance data using Moran's
Eigenvector Maps
Spatial Pattern Detection in Genetic Distance Data Using Moran's
Eigenvector Maps
Convenience Tools for Data Management,
Simulation, and Presentation of Estimates
Miscellaneous Tools for Data Management,
Simulation, and Presentation of Estimates.
Tools for Data Management,
Simulation, and Presentation of Estimates.
Tools for Management of Survey Data, Graphics, Programming, Statistics, and Simulation
Tools for Management of Survey Data, Graphics, Programming,
Statistics, and Simulation
Tools for Management of Survey Data and the Presentation of
Analysis Results
Tools for Management of Survey Data and for the Presentation of
Analysis Results
Management of Survey Data and Presentation of Analysis Results
In-Memory Caching for Repeated Computations
In-Memory Caching of Repeated Computations (Memoization)
Testing for Structural Breaks under Long Memory and Testing for
Changes in Persistence
R Markdown and Bookdown Templates to Publish Documents
A 'rmarkdown' Template that Can be Highly Customized
Quantifying Ecological Memory in Palaeoecological Datasets and
Other Long Time-Series
Estimate the memory usage of dense, in-core, numeric objects.
Medical and Pharmaceutical Statistics Shiny Application
Shiny Application of Medical and Pharmaceutical Statistics
Case-Wise and Cluster-Wise Derivatives for Mixed Effects Models
Tools for Analyzing Mixed Effect Regression Models
Mixed Effects Regression for Linear, Non-Linear and User-Defined
Models
Bayesian Regression with Meshed Gaussian Processes
Simplification of Surface Triangular Meshes with Associated
Distributed Data
Conveniently Issue Messages, Warnings, and Errors
Evaluating and Improving Matched Samples in Observational
Studies
Tools for Easier Analysis of Meteorological Fields
Find, Map, and Gather Data from Meteorological Stations
Find, Map, and Gather Environmental Data and Metadata
Meta-Analyses for Simultaneously Estimating Individual Means
Meta-Analysis for Diagnostic Test Studies
BLUE for Combining Location and Scale Information in a
Meta-Analysis
Bayesian Model Averaging for Random and Fixed Effects
Meta-Analysis
Extract and Summarise Data from Published Figures
Automated Intuitive Package for Meta-Ensemble Learning
Likelihood inference in meta-analysis and meta-regression
models.
Likelihood Inference in Meta-Analysis and Meta-Regression Models
Bayesian Mixture Analysis for Metagenomic Community Profiling
Regression Models for Meta Signal Detection Theory
Meta-Analysis using Structural Equation Modeling
Meta-Analysis of a Single Survival Curve
Gene Set Enrichment Analysis via Integration of Metabolic
Networks and RNA-Seq Data
Datasets and Functions for Reproducing Meta-Analyses
Interface to the 'Metabolights' RESTful API
Interface to the 'Metabolights' REST API
A collection of functions for analysing metabolomics data
Bayesian Meta-Analysis Using Basic Uncertain Pooling
Meta-CART: A Flexible Approach to Identify Moderators in
Meta-Analysis
Tools for Parsing, Manipulating, and Graphing Hierarchical Data
Tools for Parsing, Manipulating, and Graphing Taxonomic
Abundance Data
Analysis of the 'elements of metacommunity structure'
Analysis of the 'Elements of Metacommunity Structure'
Analysis of the "Elements of Metacommunity Structure"
Visualize 'Confounder' Control in Meta-Analyses
A Centralized Metadata Object Focus on Clinical Trial Data
Programming Workflows
Tools to Read, Analyze and Visualize Metadynamics HILLS Files
from 'Plumed'
Tools to Read, Analyze and Visualize Metadynamics 3D HILLS Files
from 'Plumed'
Metapopulation simulations for conserving salmon through
portfolio optimization
Metapopulation Simulations for Conserving Salmon Through
Portfolio Optimization
Exploring Heterogeneity in Meta-Analysis using Random Forests
Fused Lasso Approach in Regression Coefficient Clustering
Meta-Analysis of Generalized Additive Models
Comprehensive Research Synthesis Tools for Systematic Reviews
and Meta-Analysis
Comprehensive Research Synthesis Tools for Systematic Reviews
and Meta- Analysis
Generalised Inference in the Random Effects Meta Regression
Model
Inference in Meta Analysis and Meta Regression
Metaheuristic Optimization Framework for Preprocessing
Combinations
Easily Download Data and Metadata from 'DataONE'
Analysis of Microbiome Relative Abundance Data using Zero
Inflated Beta GAMLSS and Meta-Analysis Across Studies using
Random Effects Model
Microbiome Data Analysis & Meta-Analysis with GAMLSS-BEZI &
Random Effects
Diagnostic and prognostic meta analysis (metamisc)
Meta-Analysis of Diagnosis and Prognosis Research Studies
Meta-Analysis of Studies with Non Statistically-Significant
Unreported Effects
Meta-Analysis of Studies with Non-Statistically Significant
Unreported Effects
Bayesian Meta-Analysis and Network Meta-Analysis
Formalized Plots for Self-Describing Data
Formalized Plots with Systematic Metadata
Creates CrossHairs Plots for Meta-Analyses
Advanced statistical methods to model and adjust for bias in
meta-analysis
Advanced Statistical Methods to Model and Adjust for Bias in
Meta-Analysis
Statistical Methods for Sensitivity Analysis in Meta-Analysis
HTML Metadata Tags for 'R Markdown' and 'Shiny'
Enable the Use of 'metacore' to Help Create and Check Dataset
Variance-Covariance Matrix for Multivariate Meta-Analysis
Computing Variances and Covariances, Visualization and Missing
Data Solution for Multivariate Meta-Analysis
Rainforest Plots and Visual Funnel Plot Inference for
Meta-Analysis
Forest Plots, Funnel Plots, and Visual Funnel Plot Inference for
Meta-Analysis
Meta-Analytical Implementation to Identify Who Benefits Most
from Treatments
Fitting and Plotting Tools for the Maximum Entropy Theory of
Ecology (METE)
Spatio-Temporal Analysis and Mapping of Meteorological
Observations
Computation and Visualization of Energetic and Vortical
Atmospheric Quantities
Retrieve meteorological forecast from Meteogalicia and OpenMeteo
services
Mixture-of-Experts Modeling for Complex Non-Normal Distributions
Access to Spanish Meteorological Stations Services
E-Value in the Omics Data Association Studies
Identify and Rank CpG DNA Methylation Conservation Along the
Human Genome
Test Metric and Null Model Statistical Performance
Create Interactive Charts with the JavaScript 'MetricsGraphics'
Library
Washington Metropolitan Area Transit Authority API
Interface with the Meteo France Synop Data API
A Fixed Memeory Moving Expanding Window Average
Mexican Politics-Inspired Color Palette Generator
Fast Covariance Estimation for Multivariate Sparse Functional
Data
Fitting and Simulation of a block multifactor model
Minimal Free Resolutions of Graph Edge Ideals
Marginal Effects, Odds Ratios and Incidence Rate Ratios for GLMs
Simulating, Estimating and Diagnosing MGARCH (BEKK and mGJR)
Processes
Visualisations for Generalized Additive Models
Multiple smoothing parameter estimation and GAMs by GCV
GAMs with GCV smoothness estimation and GAMMs by REML/PQL
GAMs with GCV/AIC/REML smoothness estimation and GAMMs by PQL
Mixed GAM Computation Vehicle with GCV/AIC/REML smoothness
estimation
Mixed GAM Computation Vehicle with GCV/AIC/REML Smoothness
Estimation
Mixed GAM Computation Vehicle with Automatic Smoothness
Estimation
Marginal Analysis of Misclassified Longitudinal Ordinal Data
Multivariate Generalised Gaussian Distribution; Kullback-Leibler
Divergence
Model Averaging for Multivariate GLM with Null Models
Estimating Time-Varying Mixed Graphical Models
Estimating Time-Varying k-Order Mixed Graphical Models
Functions for multivariate generalized Pareto distribution (MGPD
of Type II)
mgpd: Functions for multivariate generalized Pareto distribution
(MGPD of Type II)
Graphing map attributes and non-map variables in R
A Matrix-Free Multigrid Preconditioner for Spline Smoothing
Safe, Multiple, Simultaneous String Substitution
GWR and MGWR with Spatial Autocorrelation
Multivariate Survival Function Estimation and Regression
Nonparametric and Semiparametric Methods for Multivariate
Failure Time Data
Minimum Hellinger Distance Test for Normality
Parameter estimation and prediction for multiple hidden Markov and semi-Markov models
Parameter estimation and prediction for hidden Markov and
semi-Markov models for data with multiple observation sequences
Parameter estimation and prediction for hidden Markov and
semi-Markov models for data with multiple observation
sequences.
Inference for Hidden Markov and Semi-Markov Models
Multiple Hypotheses Testing For Variable Selection
Multiple Hypothesis Testing for Variable Selection in
High-Dimensional Linear Models
Multiple Hypothesis Test Based on Distribution of p Values
Estimation of models with limited dependent variables
Missing Data Imputation and Model Checking
Promotion Time Cure Model with Mis-Measured Covariates
Association Tests for Microbial Lineages on a Taxonomic Tree
Genome-Wide Discovery of Pre-miRNAs with few Labeled Examples
Left-Censored Recurrent Events Survival Models
Multiple Imputation using Weighted Quantile Sum Analysis
Multiple Imputation using Weighted Quantile Sum Regression
Multiple Imputation Using Weighted Quantile Sum Regression
Individual data sets for micro-econometrics
Demand Analysis with the Almost Ideal Demand System (AIDS)
Analysis with the Constant Elasticity of Scale (CES) function
Analysis with the Constant Elasticity of Substitution (CES)
function
Analysis with the Constant Elasticity of Substitution (CES)
Function
Symmetric Normalized Quadratic Profit Function
Multiple Imputation in Causal Graph Discovery
Multivariate Imputation by Chained Equations
Fast Imputations Using 'Rcpp' and 'Armadillo'
Missing not at Random Imputation Models for Multiple Imputation
by Chained Equation
Multiple Imputation by Chained Equations with Random Forests
Some additional multiple imputation functions, especially for
mice
Some Additional Multiple Imputation Functions, Especially for
'mice'
Data and Statistical Analyses after Multiple Imputation
Multiple Imputation by Chained Equations with Multilevel Data
The Works (in Luxembourguish) of Michel Rodange
Multivariate Independent Comparison of Observations
Process-Based Modelling of Microbial Populations
Microbiota STability ASsessment via Iterative cluStering
Sub microsecond accurate timing functions.
Do 16s Data Analysis and Generate Figures
Methods for Taxonomic Classification of Prokaryotes
Entity Resolution with Random Partition Priors for
Microclustering
Microbial Community Ecology Data Analysis
Linked Micromap Plots for General U. S. Geographic Areas
Linked Micromap Plots for General U. S. and Other Geographic
Areas
Linked Micromap Plots for U. S. and Other Geographic Areas
Use R Graphics Files as Microplots (Sparklines) in Tables in
LaTeX or HTML Files, and Output Data.frames to Org-Mode
R Graphics as Microplots (Sparklines) in 'LaTeX', 'HTML',
'Excel'
Microplots (Sparklines) in 'LaTeX', 'Word', 'HTML', 'Excel'
Finding Optimal Microsampling Designs for Non-Compartmental
Pharmacokinetic Analysis
Breakdown a Monolithic Application to a Suite of Services
Discrete Event Simulation in R and C++, with Tools for
Cost-Effectiveness Analysis
Synthetic Control Methods with Micro- And Meso-Level Data
Estimation and Prediction Methods for High-Dimensional Mixed
Frequency Time Series Data
Multiple Imputation by Distance Aided Donor Selection
Multiples Comparisons Procedures Based on Studentized Midrange
and Range Distributions
Multiple Comparisons Procedures Based on Studentized Midrange
and Range Distributions
Multiple Imputation for Exploratory Factor Analysis
Useful R code for the Estimation of Migration
Methods for the Indirect Estimation of Bilateral Migration
Multimodal and Multilevel Network Analysis
Create Credit State Migration (Transition) Matrices
Production Rules Based Classification of Migration
Graphical User Interface of the mi Package
Graphical User Interface to the 'mi' Package
Learning Causal or Non-Causal Graphical Models Using Information
Theory
User-Friendly R Package for Supervised Machine Learning
Pipelines
Multiple-Instance Learning with Support Vector Machines
Multiple Imputation for Multivariate Binary Outcome
Mixed Logistic Regression for Genome-Wide Analysis Studies
(GWAS)
Multiple-Instance Logistic Regression with LASSO Penalty
mimR: An R interface to MIM for graphical modelling in R
mimR: A package for graphical modelling in R
Main Effects and Interactions in Mixed and Incomplete Data
Calculate MIMS Dissolved Gas Concentrations Without Getting a
Headache
Implementation of the minMSE Treatment Assignment Method for One
or Multiple Treatment Groups
Gene region-level testing procedure for SNP data, using the min
P test resampling approach
Multivariate Model Based Inference for Domains
Indicadores Economicos de Chile (Economic Outlook for Chile)
Convert Files Between Markdown or Rmarkdown Files and Mindmaps
Convert Files Between Markdown or R Markdown Files and Mind Maps
Extract and Analyze Median Molecule Intensity from 'citrus'
Output
minerva: Maximal Information-Based Nonparametric Exploration R
package for Variable Analysis
Maximal Information-Based Nonparametric Exploration R Package
for Variable Analysis
Maximal Information-Based Nonparametric Exploration for Variable
Analysis
Tools to create an internally consistent, mini version of CRAN
with selected packages only.
Create a Mini Version of CRAN Containing Only Selected Packages
Create Simple Yet Powerful HTML Documents with Light Weight CSS
Frameworks
R Interface to the Levenberg-Marquardt Nonlinear Least-Squares
Algorithm Found in MINPACK, Plus Support for Bounds
Derivative-free optimization algorithms by quadratic
approximation
Derivative-Free Optimization Algorithms by Quadratic
Approximation
An R Package for Linear Mixed Model Analyses
MINimal VALidation for Stoichiometric Reactions
Multidimensional Iterative Proportional Fitting and Alternative
Models
An Open-Source Tool for Visualization of Climate Mitigation
Scenarios
Algebraic and Statistical Functions for Genetics
Minimalist Async Evaluation Framework for R
MULTIPLE IMPUTATION AND RANDOM FORESTS FOR UNOBSERVABLE PHASE, HIGH-DIMENSIONAL DATA
Computerized Adaptive Testing with Multidimensional Item
Response Theory
Joint Maximum Likelihood Estimation for High-Dimensional Item
Factor Analysis
SVD-Based Estimation for Exploratory Item Factor Analysis
Partial Replacement Imputation Estimation for Missing Covariates
Stochastic Approximation EM for Logistic Regression with Missing
Values
Logistic Regression with Missing Covariates
Linear Regression and Logistic Regression with Missing
Covariates
Miscellaneous Useful Functions Including LaTeX Tables, Kalman
Filtering and Development Tools
Misclassified Interval Censored Time-to-Event Data
Computation of Generalized Linear Models with Misclassified
Covariates Using Side Information
Miscellaneous Functions for the Correlation Coefficient
Variable Selection for Multiply Imputed Data
Multiple Imputation with Sequential Penalized Regression
Statistical Analysis of Misreporting on Sensitive Survey
Questions
Intuitive Missing Data Imputation Framework
'Correctly Analyse Disease Recurrence with Missing at Risk
Information using Population Mortality'
Simulating and Analyzing Time to Event Data in the Presence of
Population Mortality
Comparing Observed and Imputed Values under MAR and MCAR
Nonparametric Missing Value Imputation using Random Forest
Handling missing values with/in multivariate data analysis
(principal component methods)
Handling Missing Values with Multivariate Data Analysis
Handling Missing Data in Stochastic Block Models
Self-Organizing Maps with Built-in Missing Data Imputation
Missing Outcome Data in Health Economic Evaluation
Missingness in Multi-Task Regression with Network Estimation
Data sets, functions and examples from the book:"Modern
Industrial Statistics" by Kenett, Zacks and Amberti
Data Sets, Functions and Examples from the Book: "Modern
Industrial Statistics" by Kenett, Zacks and Amberti
Methods in Structural Reliability Analysis
Tools for Multiple Imputation in Multilevel Modeling
Tools for multiple imputation of missing data
Tools for Multiple Imputation of Missing Data
Cybersecurity MITRE Standards Data and Digraphs
Estimation/Multiple Imputation for Mixed Categorical and
Continuous Data
Estimation/multiple Imputation for Mixed Categorical and Continuous Data
Estimation/multiple Imputation for Mixed Categorical and
Continuous Data
Multivariate normal mixture models and mixtures of generalized
linear mixed models including model based clustering
Multivariate Normal Mixture Models and Mixtures of Generalized
Linear Mixed Models Including Model Based Clustering
Estimation of the Order of Mixture Distributions
Estimation of Order of Mixture Distributions
A Mixed-Effects Model for Analyzing Cluster-Level Non-Ignorable
Missing Data
Genetics and Independence Testing of Mixed Genetic Panels
Omics Data Integration Using Kernel Methods
Finite Mixture Modeling for Raw and Binned Data
Plotting and Average Theta Functions for Multiple Class Mixed
Rasch Models
Mixtures of Power Exponential and Skew Power Exponential
Distributions for Use in Model-Based Clustering and
Classification
Clustering Using Mixtures of Sub Gaussian Stable Distributions
MIXED EFFECTS MODELS FOR MULTICATEGORY DATA
Mixed effects cumulative link and logistic regression models
Mixed Effects Cumulative Link and Logistic Regression Models
Mixture Model for the Deconvolution of Thermal Decay Curves
Cluster High Dimensional Categorical Datasets
Sparse Canonical Correlation Analysis for High-Dimensional Mixed
Data
Mixed, Low-Rank, and Sparse Multivariate Regression on
High-Dimensional Data
Tools for Discrete Multivariate Mixed Membership Models
Estimator with Qudratics Forms in Mixeds Models
Estimation Methods for Stochastic Differential Mixed Effects
Models
Design and analysis of mixture experiments
Design and Analysis of Mixture Experiments
Computes false discovery rates and effect sizes using normal
mixtures
Mixture of Multiple Highly Variable Feature Selection Methods
Simulated Maximum Likelihood Estimation of Mixed Logit Models
for Large Datasets
Mixed Model ANOVA and Statistics for Education
mixlow method for assessing drug synergism
Mixlow Method for Assessing Drug Synergism/Antagonism
An Extended Mixed-Effects Framework for Meta-Analysis
Mixed Poisson Regression for Overdispersed Count Data
Functions to fit mixtures of regressions.
Functions to Fit Mixtures of Regressions
Forensic Genetics DNA Mixture Separation
Fitting finite mixture of scale mixture of skew-normal
distributions .
Fitting Finite Mixture of Scale Mixture of Skew-Normal
Distributions
Sequential Quadratic Programming for Fast Maximum-Likelihood
Estimation of Mixture Proportions
DE Analysis of RNA-Seq Data by Mixtures of NB
Tools for analyzing finite mixture models
Tools for Analyzing Finite Mixture Models
Predictive Toxicity Assessment of Chemical Mixtures
Curve Fitting and Mixture Toxicity Assessment
Dose Response Curve Fitting and Mixture Toxicity Assessment
Modelling Continuous Report Visual Short-Term Memory Studies
Mixture Models for Clustering and Classification
Finite Gaussian Mixture Models for Clustering and Classification
Multi-species sIZE spectrum modelling in R
Multi-Species sIZE Spectrum Modelling in R
2D and 3D movement-based kernel density estimates (MKDEs).
Routines for fitting kinetic models with one or more state
variables to chemical degradation data
Routines for Fitting Kinetic Models with One or More State
Variables to Chemical Degradation Data
Kinetic Evaluation of Chemical Degradation Data
Efficient multi-level k-circulant supersaturated designs
Efficient Multi-Level k-Circulant Supersaturated Designs
Copula selection and fitting using maximum likelihood
Machine Learning-based Differential Network Analysis of
Transcriptome Data
Abstract Classes for Building 'scikit-learn' Like API
Tools to Gather Data from Major League Baseball Advanced Media
(MLBAM)
Tools to Gather Data from Major League Baseball Advanced Media
Major League Baseball Player Statistics Calculator
Stats, Photos, Logos, and Colors of M.L.B. (Major League
Baseball)
Exploratory Data Analysis and Manipulation of Multi-Label Data
Sets
R Ultimate Multilabel Dataset Repository
Expected/Observed Fisher Information and Bias-Corrected Maximum
Likelihood Estimate(s)
Machine learning algorithms with unified interface and confusion
matrices
Machine Learning Algorithms with Unified Interface and Confusion
Matrices
Maximum Likelihood Estimates of Gaussian Processes
Multilevel Exponential-Family Random Graph Models
Iterative Proportional Fitting Algorithms for Nested Structures
Independent Component Analysis using Maximum Likelihood
Missing Data Imputation with Automated Machine Learning
Multiple Imputation with Automated Machine Learning
Examples from Multilevel Modelling Software Review
Multilevel Model for Multivariate Responses with Missing Values
ML estimation under multivariate linear mixed models with missing values
ML estimation under multivariate linear mixed models with
missing values
Machine Learning Algorithms for Multivariate Time Series
Bayesian Model Averaging for Multinomial Logit Models
'Rcpp' Integration for the 'mlpack' Library
A Power Analysis Toolbox to Find Cost-Efficient Study Designs
Algorithms for Class Distribution Estimation
Analysis and Visualisation of Benchmark Experiments
Collection of Machine Learning Data Sets for 'mlr3'
Fairness Auditing and Debiasing for 'mlr3'
Filter Based Feature Selection for 'mlr3'
Preprocessing Operators and Pipelines for 'mlr3'
Probabilistic Supervised Learning for 'mlr3'
Support for Spatial Objects Within the 'mlr3' Ecosystem
Spatiotemporal Resampling Methods for 'mlr3'
Easily Install and Load the 'mlr3' package family
Easily Install and Load the 'mlr3' Package Family
Composable Preprocessing Operators and Pipelines for Machine
Learning
A Toolbox for Model-Based Optimization of Expensive Black-Box
Functions
Bayesian Optimization and Model-Based Optimization of Expensive
Black-Box Functions
Model-Based Optimization for 'mlr3' Through 'mlrMBO'
Stepwise Regression with Assumptions Checking
Efficient Estimation of Bayesian SBMs & MLSBMs
Use the MLS Junk Generator Algorithm to Generate a Stream of
Pseudo-Random Numbers
Most Likely Transformations: Documentation and Regression Tests
Vocabulary and Corpus Preprocessing for Natural Language
Pipelines
Multiple Mediation Analysis for Big Data Sets
Mathematical Morphology in Any Number of Dimensions
Mathematical morphology in any number of dimensions
Arbitrary Dependency Mixed Multivariate Bayesian Models
Mixed Multivariate Cumulative Incidence Functions
MMELN : Estimation of multinormal mixture distribution.
Estimation of Multinormal Mixture Distribution
Multivariate Meta-Analysis Using Sarmanov Beta Prior
Distributions
Easy Computation of Marketing Metrics with Different Analysis
Axis
Multivariate Marginal Models with Response Specific Parameters
an R package for analyzing multivariate longitudinal data with
multivariate marginal models
Multivariate marginal models with shared regression parameters
Simultaneous Inference for Multiple Linear Contrasts in GEE
Models
Modern measures of population divergence
Modern measures of population differentiation
Modern Measures of Population Differentiation
Modeling Multivariate Origins Determinants - Evolutionary
Lineages in Ecology
Integrative Analysis of Several Related Data Matrices
Monte-Carlo Methods for Prediction Functions
Various Similarity and Distance Metrics for Marked Point
Processes
Markov Modulated Poisson Process for Unsupervised Event
Detection in Time Series of Counts
Model-Based Clustering and Classification with Mixtures of
Modified t Factor Analyzers
Easy Downloading Capabilities for the Members' Name Information
Service
A Generator of Multivariate Non-Normal Random Numbers
Multivariate Normal Distributions with Power Integrand
The multivariate normal and t distributions
The Multivariate Normal and t Distributions
The Multivariate Normal and t Distributions, and Their Truncated
Versions
MNREAD Parameters Estimation and Curve Plotting
Multivariate Nonparametric Statistical Process Control
Affine Invariant Tests of Multivariate Normality
Calculates Transition Matrices and Mobility Indices
Models Bivariate Dependence and Produces Bivariate Return
Periods
Spatial Simulation and Scale-Dependent Analysis of Biodiversity
Changes
General Nonlinear Multivariate Finite Mixtures
Multi-Objective Clustering Algorithm Guided by a-Priori
Biological Knowledge
Lightweight and Self-Contained Modules for Code Organization
Extraction of Bands from MODIS Surface Reflectance Product MOD09
NRT
Moderation Analysis for Two-Instance Repeated Measures Designs
Community Structure Detection via Modularity Maximization
Modelling temperature effects using time series data
Estimate ED50 Based on Modified Turning Point Method
A 'shiny' Module for Creating Charts of Various Types
Fit a Modified Connor-Mosimann Distribution to Elicited
Quantiles in Multinomial Problems
Compare Models with Cross-Validated Log-Likelihood
Mode Estimation -- Chernoff Distribution
Multiscale Analysis for Density Functions
Stratified and Personalised Models Based on Model-Based Trees
and Forests
Make Static HTML Website for Predictive Models
A Model Object Framework for Regression Analysis
Interactive Studio with Explanations for ML Predictive Models
Interactive Studio for Explanatory Model Analysis
Estimation of Model-Based Predictions, Contrasts and Means
Modeling physical computer codes with functional outputs using
clustering and dimensionality reduction
Data Sets Used Useful for Modeling Packages
Provide Tools to Register Models for Use in 'tidymodels'
Model-free estimation of a psychometric function
A Framework for Creating, Managing and Training Multiple Caret
Models
Functions to Assess the Business Impact of Churn Prediction
Models
A Collection of Useful Custom Tools for D&A and Modelling
Plots to Evaluate the Business Performance of Predictive Models
Modelling Functions that Work with the Pipe
Create Beautiful, Customizable, Publication-Ready Summary Tables
for Statistical Models
Summary Tables and Plots for Statistical Models and Data:
Beautiful, Customizable, and Publication-Ready
Summary Tables for Statistical Models: Beautiful, Customizable,
and Publication-Ready
Testing Infrastructure for Broom Model Generics
The Tidymodels Extension for Time Series Modeling
Ensemble Algorithms for Time Series Forecasting with Modeltime
Resampling Tools for Time Series Forecasting
Tools and Classes for Statistical Models
An Implementation of Two Modern Education-Based Value-Added
Models
Accompaniment Package to ModernDive: An Introduction to
Statistical and Data Sciences via R
Find the Modes and Assess the Modality of Complex and Mixture
Distributions, Especially with Big Datasets
Modeling and Analysis of Stochastic Systems
Evaluation of Classification Model Options
A 'shiny' Module for Reading Excel Sheets
Multivariate Outlier Detection and Imputation for Incomplete
Survey Data
Modified Mann Kendall Trend Tests with Variance Correction
Approach
Modified Versions of Mann Kendall and Spearman's Rho Trend Tests
R tools for processing Level 2 Cloud Mask products from MODIS
Calculating Marginal Effects and Levels with Errors
'MatLab'-Style Modeling of Optimization Problems
Interact with Moscow Exchange Informational and Statistical
Server ('ISS')
Multiobjective Genetic Algorithm for Variable Selection in
Regression
A Serialization-Style Flattening and Description for JSON
Dental Surface Complexity Measurement Tools
Multivariate Outlier Detection in Contingency Tables
Predicting Differential Drug Response using Multi-Omics Networks
Bayesian Model Selection and Averaging for Non-Local and Local
Priors
Moment-Matching Methods for Weighted Sums of Chi-Squared Random
Variables
Moments, skewness, kurtosis and related tests
Moments, cumulants, skewness, kurtosis and related tests
Moments, Cumulants, Skewness, Kurtosis and Related Tests
Maximum Likelihood Analysis of Animal Movement Behavior Using
Multivariate Hidden Markov Models
An R API Wrapper for the Monash University Probabilistic Footy
Tipping Competition
Accesses the Monkeylearn API for Text Classifiers and Extractors
Monotone multi-layer perceptron neural network
Monotone Multi-Layer Perceptron Neural Network
Multi-Layer Perceptron Neural Network with Optional Monotonicity
Constraints
Perform Monothetic Clustering with Extensions to Circular
Perform Monothetic Clustering with Extensions to Circular Data
Monotonic Binning for Credit Rating Models
Shiny User Interface for 'monobin' Package
Easily Create, View and Use Monochrome Colour Palettes
Geometric Morphometric Analysis of Monogenean Anchors
Estimation for multivariate normal data with monotone missingness
Estimation for multivariate normal and Student-t data with
monotone missingness
Estimation for Multivariate Normal and Student-t Data with
Monotone Missingness
Estimation for MVN and Student-t Data with Monotone Missingness
Bayesian Monotonic Regression Using a Marked Point Process
Construction
Test for Monotonicity in Expected Asset Returns, Sorted by
Portfolios
Helper Functions to Work with 'Moodle' Data
Functions and Datasets for the Book by Keon-Woong Moon
Mean Squared Out-of-Sample Error Projection
Species Distribution MOdeling with Pseudo-Absences
Collection of Datasets Pertaining to Loop 1 "Mopac"
MOPSOCD: Multi-objective Particle Swarm Optimization with
Crowding Distance
A Toolbox for Conditional Inference Random Forests
A Toolbox for Conditional Inference Trees and Random Forests
Color schemes compatible with red-green color perception
difficulties
3D Segmentation of Voxels into Morphologic Classes
Estimate Parameters of Mixtures of Logistic Regressions
Morphometric Maps, Shape Data and Cross Sectional Geometry
Morphometric Maps, Bone Landmarking and Cross Sectional Geometry
MOdelling tools for Reproduction and Survival data in
Ecotoxicology
MOdelling Tools for Reproduction and Survival Data in
Ecotoxicology
Modelling Tools for Reproduction and Survival Data in
Ecotoxicology
Modelling Reproduction and Survival Data in Ecotoxicology
Analysis of Archaeological Mortality Data
Data sets and utilities from Project MOSAIC (mosaic-web.org)
Project MOSAIC (mosaic-web.org) math and stats teaching
utilities
Project MOSAIC Statistics and Mathematics Teaching Utilities
Project MOSAIC (mosaic-web.org) statistics and mathematics
teaching utilities
Finding Rhythmic and Non-Rhythmic Trends in Multi-Omics Data
(MOSAIC)
Function-Based Numerical and Symbolic Differentiation and
Antidifferentiation
R-Language Based Calculus Operations for Teaching
Common Utilities for Other MOSAIC-Family Packages
Project MOSAIC (mosaic-web.org) data sets
Project MOSAIC (mosaic-web.org) manipulate examples.
An Interface to Statistical Modeling Independent of Model
Architecture
Multi-Objective Simultaneous Model and Feature Selection
Moving Sum Based Procedures for Changes in the Mean
Motif-Based Spectral Clustering of Weighted Directed Networks
Analyzing Paired Neuron Discharge Times for Time-Domain
Synchronization
Mountain Plots, Folded Empirical Cumulative Distribution Plots
Mouse-Tracking Measures from Trajectory Data
Mixtures of von Mises Fisher Distributions
Mixtures of von Mises-Fisher Distributions
Visualizing and analyzing animal track data
Visualizing and Analyzing Animal Track Data
Animal Movement Modelling using Hidden Markov Models
Estimate Wind Speeds from Bird Trajectories
Calculation of Accumulated Cost Surface and Least-Cost Paths
Related to Human Movement Across the Landscape
Calculation of Accumulated Cost Surface, Least-Cost Paths, and
Least-Cost Corridors Related to Human Movement Across the
Landscape
Calculation of Slope-Dependant Accumulated Cost Surface,
Least-Cost Paths, and Least-Cost Corridors Related to Human
Movement Across the Landscape
Calculation of Slope-Dependant Accumulated Cost Surface,
Least-Cost Paths, Least-Cost Corridors, Least-Cost Networks
Related to Human Movement Across the Landscape
Weekly Notified Dengue Cases in Sri Lanka
Genetic Analysis of Multi-Parent Recombinant Inbred Lines
Process and Analyse Data from m-Path Sense
Multinomial Probit Bayesian Additive Regression Trees
MPC - Multiple Precision Complex Library
Mean-Parametrized Conway-Maxwell Poisson (COM-Poisson)
Regression
Graphical Model Stability and Variable Selection Procedures
Symbolic computation and more with multivariate polynomials
Symbolic Computation and More with Multivariate Polynomials
Power Analysis via Monte Carlo Simulation for Correlated Data
Statistics for analysing multiple simultaneous point processes
on the real line
Multivariate probit model for binary/ordinal response
Mass-Preserving Spline Functions for Soil Data
Multinomial Processing Tree (MPT) Models
Standardized Comparison of Workflows in Mass Spectrometry-Based
Bottom-Up Proteomics
Marginal regresson models for dependent data
Penalized Inverse-Variance Weighted Estimator for Mendelian
Randomization
Two Sample Mendelian Randomization using Robust Adjusted Profile
Score
Multilocus Random Mixed Linear Model for Genome-Wide Association
Study
Multilocus Random Mixed Linear Model for Genome-Wide Association
Study and Linkage Analysis
Multi-Locus Random-SNP-Effect Mixed Linear Model for Genome-Wide
Association Studies and Linkage Analyses
Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for
Genome-Wide Association Study
Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for GWAS
Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for
Genome-Wide Association Study with Graphical User Interface
Inferences for ratios of coefficients in the general linear model
Inferences for ratios of coefficients in the general linear
model
Ratios of Coefficients in the General Linear Model
Bayesian Summary Data Models for Mendelian Randomization Studies
Magnetic Resonance Binning, Integration and Normalization
Scale Space Multiresolution Analysis of Random Signals
Fits regression models when the outcome is partially missing.
Fits Regression Models When the Outcome is Partially Missing
Marine Regions Data from 'Marineregions.org'
Markov Random Field Models for Image Analysis
Depth Measures in Multivariate, Regression and Functional
Settings
Simulate from ODE-Based Population PK/PD and Systems
Pharmacology Models
Modified Rand Index (1 and 2.1 and 2.2) and Modified Adjusted
Rand Index (1 and 2.1 and 2.2)
Data for Multilevel Regression and Poststratification
Regression Analysis for Very Large Data Sets via Merge and
Reduce
Wright & London's Modern Regression Techniques
Package for Calculation of ARMSS, Local MSSS and Global MSSS
Multiscale Bernstein Polynomials for Densities
Protein Mass Spectra Dataset from a Breast Cancer Study
Protein Mass Spectra Dataset from a Dilution Experiment
Protein Mass Spectra Dataset from a Prostate Cancer Study
Helper Functions for Second Primary Cancer Analyses
Nonparametric Estimation for Multistate Models
Multivariate Fay Herriot Models for Small Area Estimation
Difference Benchmarking for Multivariate Small Area Estimation
Multivariate Small Area Estimation using Hierarchical Bayesian
Method
Optimum Benchmarking for Multivariate Small Area Estimation
Ratio Benchmarking for Multivariate Small Area Estimation
Multi-Step Adaptive Estimation Methods for Sparse Regressions
Estimate Sample Size to Detect Bacterial Contamination in a
Product Lot
Statistical analysis for Methylation-Sensitive Amplification
Polimorphism data
Statistical analysis for Methylation-sensitive Amplification
Polymorphism data
Draws diagrams (mis)representing the results of mass spec
experiments
Draw Diagrams (mis)Representing the Results of Mass Spec
Experiments
Calibration and filtering of MALDI-TOF Peptide Mass Fingerprint data.
Hazard of Multi-Stage Clonal Expansion Models
Chart Generation for 'Microsoft Word' and 'Microsoft PowerPoint'
Documents
Multiscale Change Point Detection via Gradual Bandwidth
Adjustment in Moving Sum Processes
R Client for the Microsoft Cognitive Services Text Analytics
REST API
R Client for the Microsoft Cognitive Services 'Text-to-Speech'
REST API
R Client for the Microsoft Cognitive Services Web Language Model
REST API
Bayesian Inference for Multivariate Stochastic Differential
Equations
Metabolite set enrichment analysis for factor loading in
principal component analysis
Modeling non-uniformity in short-read rates in RNA-Seq data
Semiparametric Bayesian Gaussian copula estimation
High dimensional multiclass classification using sparse group
lasso
High Dimensional Multiclass Classification Using Sparse Group
Lasso
A library to serialize or unserialize data in MessagePack format
Calculates the degrees of freedom of elastic net, adaptive lasso
and generalized elastic net
Degrees of freedom of elastic net, adaptive lasso and
generalized elastic net
Degrees of Freedom of Elastic Net, Adaptive Lasso and
Generalized Elastic Net
Extends Messages, Warnings and Errors by Adding Levels and Log
Files
Tools for Developing Diagnostic Messages
Multiplicative SHAP Values for Two-Part Models
An R Package for Exploring Molecular Signatures Database
MSigDB for Multiple Organisms in a Tidy Data Format
MSigDB Gene Sets for Multiple Organisms in a Tidy Data Format
Improved Techniques to Estimate Trend, Velocity and Acceleration
from Sea Level Records
Multi-state Markov models in continuous time
Multi-state Markov and hidden Markov models in continuous time
Multi-state Markov and Hidden Markov Models in Continuous Time
Multi-State Markov and Hidden Markov Models in Continuous Time
Functions and Datasets for "Methods of Statistical Model
Estimation".
Functions and Datasets for "Methods of Statistical Model
Estimation"
Building Augmented Data to Run Multi-State Models with 'msm'
Package
Datasets and Functions used in Multivariate Statistics: Old
School by John Marden
Data Sets and Functions Used in Multivariate Statistics: Old
School by John Marden
Multi-state Path-Dependent Models in Discrete Time
Morse-Smale approximation, regression and visualization
Morse-Smale Approximation, Regression and Visualization
A Collection of DIF Tests for Multistage Tests
Procedures to Generate Patterns under Multistage Testing
Data preparation, estimation and prediction in multi-state
models
Data Preparation, Estimation and Prediction in Multi-State
Models
Multivariate Symmetric Uncertainty and Other Measurements
Toolkit for Time Related Data Presentation and Adding Colors to
Markdown or Shiny
Toolkit for Assisting Kitchen and Garden Projects
My Toolbox for Assisting Document Editing and Data Presenting
Read Data from Delimited MTConnect Data Files
Read Data from Delimited 'MTConnect' Data Files and Perform some
Analysis
Sample Size and Post-Hoc Power of Association Studies Involving
Mitochondrial DNA Haplogroups
Sample Size and Power for Association Studies Involving
Mitochondrial DNA Haplogroups
Unsupervised Multi-Task and Transfer Learning on Gaussian
Mixture Models
Multivariate time series data imputation
Multivariate Time Series Data Imputation
Constructing Hierarchical Voronoi Tessellations and Overlay
Heatmap for Data Analysis
Murty's Algorithm for k-Best Assignments
Splus to R Compatibility for package muStat
Data on Freedom of Information Act Requests
Interchange Tools for Multi-Parameter Spatiotemporal Data
A Nonparametric Model for Unfolding Scale Analysis
Relative Risk Based on the Ratio of Median Unbiased Estimates
Mixture of Gaussian Bayesian Network Model
Hazard Function Estimation in Survival Analysis
Exploring Data with Tree Data Structures
Create, Modify and Visualize Multi-Layered Networks
Multivariate Version of the Diebold-Mariano Test
Provides Test Functions for Multivariate Integration
Multiple Tests and Simultaneous Confidence Intervals
Simultaneous Inference for General Linear Hypotheses
Simultaneous Inference in General Parametric Models
Optimal Exact Tests for Multiple Binary Endpoints
GEE Solver for Correlated Nominal or Ordinal Multinomial
Responses
Multi Action Button for 'Shiny' Applications
Apply Functions to Multiple Multidimensional Arguments
Apply Functions to Multiple Multidimensional Arrays or Vectors
Finite Difference Method for Multi-Asset Option Valuation
Collinearity Detection in a Multiple Linear Regression Model
Multivariate Analysis and Visualization for Biological Data
Latent Variable Model to Infer Food Intake from Multiple
Biomarkers
Variable Importance Analysis with Population Intervention Models
Calculating and Visualizing ROC Curves Across Multi-Class
Classifications
Calculating and Visualizing ROC and PR Curves Across Multi-Class
Classifications
Functions for the Courses Multivariate Analysis and Computer
Intensive Methods
Multiblock Data Fusion in Statistics and Machine Learning
Evaluating Multinomial Order Restrictions with Bridge Sampling
Quantitative linkage analysis tools using the variance
components approach
Quantitative Linkage Analysis Tools using the Variance
Components Approach
A Companion to the Multi-CAST Collection
A Generic Convex-Hull-Based Model Selection Method
Build MultiClass Pair-Based Classifiers using TSPs or RF
Flexible Modeling of Multivariate Count Data via the
Multivariate Conway-Maxwell-Poisson Distribution
Add Multiple Colors to your Console Output
Add Multiple Colors to your Console & RMarkdown Output
Permutations of multisets in cool-lex order.
Permutations of Multisets in Cool-Lex Order
Parallel processing of R code on machines with multiple cores or CPUs
Parallel processing of R code on machines with multiple cores or
CPUs
A stub package to ease transition to 'parallel'.
A Graph-Based Test for Comparing Multivariate Distributions in
the Multi Sample Framework
Multivariate Difference Between Two Groups
Multivariate Functional Additive Mixed Models
Multiverse Analyses for Conditioning Data
Dealing with Several Images of a Same Object Constituted of
Different Zones
Analysis of Ecological Drivers on Ecosystem Multifunctionality
Read Fixed Width Format Files Containing Lines of Different Type
Probability Models and Statistical Analysis of Random
Multigraphs
Generalised Function to Calculate a Variety of Multilateral
Price Index Methods
Transitive Index Numbers for Cross-Sections and Panel Data
Propensity Score Matching and Subclassification in Observational
Studies with Multi-Level Treatments
Multilevel and Mixed Effects Model Diagnostics and Effect Sizes
Capture-Mark-Recapture Analysis using Multiple Non-Invasive
Marks
Harmonizing Various Comorbidity, Multimorbidity, and Frailty
Measures
Regression analysis of overdispersed correlated count data
MULTIplex NEtworks with Shared Structure
Analysis and Mining of Multilayer Social Networks
Bayesian Network Meta-Analysis of Individual and Aggregate Data
Robust Estimation of Overdispersed Multinomial Regression Models
Clustering Multinomial Count Data under the Presence of
Covariates
Bayesian Inference for Multinomial Models with Inequality
Constraints
Fits Multivariate Spatio-Temporal Occupancy Model
Infrastructure to Assemble Multi-Panel Figures (from Grobs)
Weighted Cox-regression for nested case-control data
Weighted Cox-Regression for Nested Case-Control Data
Weighted Cox-regression for Nested Case-Control Data
Additive and Multiplicative Null Models for Multiple Stressor
Data
Analysis of Multiple Social Networks with Algebra
Algebraic Tools for the Analysis of Multiple Social Networks
Data Manipulation with Parallelism and Shared Memory Matrices
Calculate Multivariate Richness via UTC and sUTC
Fast Cross-Validation for Multi-Penalty Ridge Regression
Selecting Combinations of Predictors by Leveraging Multiple AUCs
for an Ordered Multilevel Outcome
Estimation of Accuracy in Multisite Machine-Learning Models
Clustering a Dataset using Multi-SOM Algorithm
Clustering a Data Set using Multi-SOM Algorithm
Utility Functions for Parametric Multi-State Models
Simultaneous manipulation of multiple arrays of data, with
data.list objects
Spectral Analysis Tools using Multitaper Method
Spectral Analysis Tools using the Multitaper Method
Penalized Estimation and Forecasting of Multiple Subject Vector
Autoregressive (VAR) Models
Penalized Estimation and Forecasting of Multiple Subject Vector
Autoregressive (multi-VAR) Models
Penalized Estimation of Multiple-Subject Vector Autoregressive
(multi-VAR) Models
Measuring Multivariate Dependence Using Distance Multivariance
'Explorable Multiverse' Data Analysis and Reports
Cooperative Learning for Multi-View Analysis
Hypothesis Test for Dependent Clusterings of Two Data Views
Hypothesis Tests for Association Between Subgroups in Two Data
Views
Estimation of Multivariate Long-Memory Models Parameters
Common Multiple Testing Procedures and Gatekeeping Procedures
Metabolomic Multivariate and Univariate Analyses
Metabolomic Univariate and Multivariate Analysis
Metabolomics Univariate and Multivariate Analysis
Multiplicative Mixed Models using Template Model Builder
Multiplicative Mixed Models using the Template Model Builder
Interpolation of Munsell renotation data to convert any hue and
chroma values to CIE xyY, CIE XYZ, sRGB, CIE Lab or CIE Luv.
Interpolate Munsell Renotation Data from Hue/Chroma to CIE/sRGB
Interpolate Munsell Renotation Data from Hue/Chroma to CIE/RGB
Murphy Diagrams for Forecast Comparisons
Extract Muscle Synergies from Electromyography
Conversion of Nuclear Magnetic Resonance spectrum in audio file
Decipher Mutational Signatures from Somatic Mutational Catalogs
GUI and wrappers for multiple testing procedures
A Graphical User Interface for the MuToss Project
A graphical user interface for the MuToss Project
Calculation and Decomposition of the Mutual Information Index
Computation and Decomposition of the Mutual Information Index
Causal Inference using Multivariate Generalized Propensity Score
Multivariate Locally Stationary Wavelet Analysis
Multivariate, Locally Stationary Wavelet Process Estimation
Imputation Methods for Multivariate Locally Stationary Time
Series
A General Framework of Multivariate Mixed-Effects Selection
Models
Multivariate Comparative Tools for Fitting Evolutionary Models
to Morphometric Data
Multi-State Adaptive Dynamic Principal Component Analysis for
Multivariate Process Monitoring
Multivariate Peaks-over-Threshold Modelling for Spatial Extreme
Events
MultiVariate Stochastic Linear Ornstein-Uhlenbeck models for
phylogenetic Comparative hypotHeses
Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for
Phylogenetic Comparative Hypotheses
Generalized Shapiro-Wilk test for multivariate normality
statistical methods for analysing multivariate abundance data
Statistical Methods for Analysing Multivariate Abundance Data
Workspace organization; transparent lazy-loading; better editing & backup; easy documentation; easy package preparation; misc utils
Workspace organization, code and documentation editing, package
prep and editing, etc.
Workspace Organization, Code and Documentation Editing, Package
Prep and Editing, Etc
Multivariate Variance Components Tests for Multilevel Data
Wavelet analysis of multiple time series
Wavelet Analysis of Multiple Time Series
Multivariate Probabilities via the Genz and Bretz (2002)
Formulation
Multivariate Probabilities of Scale Mixtures of Multivariate
Normal Distributions via the Genz and Bretz (2002) QRSVN Method
Multivariate Generalized Linear Mixed Models for Ranking Sports
Teams
Multivariate Gaussian Graphical Model Analysis
Influence Measures and Diagnostic Plots for Multivariate Linear
Models
Multivariate Meshes and Histograms in Arbitrary Dimensions
Multivariate and univariate meta-analysis and meta-regression
Multivariate and Univariate Meta-Analysis and Meta-Regression
Goodness of Fit Tests for Multivariate Normality
Nelson-Aalen estimator of the cumulative hazard in multistate models
Nelson-Aalen estimator of the cumulative hazard in multistate
models
Nelson-Aalen Estimator of the Cumulative Hazard in Multistate
Models
Fast Multivariate Normal and Student's t Methods
Software for moving grid adjustment in plant breeding field
trials
Moving Grid Adjustment in Plant Breeding Field Trials
Simultaneously Impute the Missing and Censored Values
ML estimation for multivariate normal data with missing values.
ML Estimation for Multivariate Normal Data with Missing Values
ML estimation for multivariate normal data with missing values
Powerful Tests for Multivariate Normality
Normality test for multivariate variables
Generate New Multivariate Normal Samples from Permutations
Multivariate outlier detection based on robust methods
Multivariate Outlier Detection Based on Robust Methods
Multivariate Product Distributions for Elliptically Contoured
Distributions
Orthant Probability of the Multivariate Normal Distribution
Compute the Coefficient of Determination for Vector or Matrix
Outcomes
Mean and Variance of Truncated Normal Distribution
Bayesian Inference for the Multivariate Skew-t Model
Multivariate Normal and T Distribution functions of (Dunnett,
1989)
MWA package for causal inference in spatiotemporal event data
Causal Inference in Spatiotemporal Event Data
Multichannel wavelet deconvolution with additive long memory
noise
Multichannel Wavelet Deconvolution with Additive Long Memory
Noise
Solvers for the Maximum Weight Connected Subgraph Problem and
Its Variants
Solvers for Maximum Weight Connected Subgraph Problem and Its
Variants
Efficient mixed-level k-circulant supersaturated designs
Efficient Mixed-Level k-Circulant Supersaturated Designs
Measurement Model of Derivatives in 'OpenMx'
Apply Normalization Methods to Multiplexed Images
A framework to perform phylotranscriptomics analyses for
Evolutionary Developmental Biology research
A Framework to Perform Phylotranscriptomics Analyses for
Evolutionary Developmental Biology Research
Integrative immunoinformatics for Mycobacterial diseases in R
platform
Integrative Immunoinformatics for Mycobacterial Diseases in R
Platform
Automatic Correlation and Regression Test in a 'data.frame'
Automatic Correlation and Regression Test in a Data Frame
Regression Models for Monozygotic Twin Data
Port of the 'Scilab' 'n1qn1' Module for Unconstrained BFGS
Optimization
Port of the 'Scilab' 'n1qn1' and 'qnbd' Modules for
(Un)constrained BFGS Optimization
Port of the 'Scilab' 'n1qn1' Modules for Un-constrained BFGS
Optimization
Hierarchical Archimedean Copulas Constructed with Multivariate
Compound Distributions
Numerical Formal Concept Analysis for Systematic Clustering
Nonparametric Estimate of FDR Based on Bernstein Polynomials
Non Graphical Solution to the Cattell Scree Test
Parallel Analysis and Non Graphical Solutions to the Cattell
Scree Test
Parallel Analysis and Other Non Graphical Solutions to the
Cattell Scree Test
Create n-Dimensional, Quasi-Proportional Venn Diagrams
Comprehensive Library for Working with Missing (NA) Values in
Vectors
Read Cancer Records in the NAACCR Format
Wraps libnabo, a fast K Nearest Neighbour library for low
dimensions
Wraps 'libnabo', a Fast K Nearest Neighbour Library for Low
Dimensions
Functions to construct non-additive genetic relatedness matrices
Functions to construct (non)additive genetic relatedness
matrices and facilitate animal model analyses
Flexible Options for Handling Missing Values
Operations to Ease Data Analyses Specific to Nigeria
Empirical Extrapolation of Time Feature Patterns
High Performance Implementation of the Naive Bayes Algorithm
Nonparametric Additive Instrumental Variable Estimator: A Group
Shrinkage Estimation Perspective
Nonparametric Additive Instrumental Variable Estimator and
Related IV Methods
Create Visual Citations to Include in Presentations
Create Visual Citations for Presentation Slides
Create Visual Citations for Presentations and Posters
Provide namespace managment functions not (yet) present in base
R
Named Entity Recognition in Texts using 'NameTag'
Data Structures, Summaries, and Visualisations for Missing Data
High-Level Data Analysis and Manipulation in 'tidyverse' Style
NNG (Nanomsg Next Gen) Lightweight Messaging Library
tools for nanoparticle simulation and PDF calculation
Tools for Nanoparticle Simulation and Calculation of PDF and
Total Scattering Structure Function
Performs Quality Control, Data Normalization, and Batch Effect
Correction for 'NanoString nCounter' Data
Nanosecond-Resolution Time Support for R
A Robust Flexible Sys.sleep() Replacement
A Flexible and Robust Sys.sleep() Replacement
Nonlinear Cointegrating Autoregressive Distributed Lag Model
R Package for Handling Arrays in a Consistent Manner
Subset- And Name-Aware Array Utility Functions
Native Access Medical Record Retriever for High Yield Analytics
Collection of datasets from the ASA 2006 data expo
nat: NeuroAnatomy Toolbox for Analysis of 3D Image Data
NeuroAnatomy Toolbox for Analysis of 3D Image Data
NeuroAnatomy Toolbox (nat) Extension for Assessing Neuron
Similarity and Clustering
NeuroAnatomy Toolbox ('nat') Extension for Assessing Neuron
Similarity and Clustering
NeuroAnatomy Toolbox (nat) Extension for Handling Template
Brains
NeuroAnatomy Toolbox ('nat') Extension for Handling Template
Brains
File System Utility Functions for NeuroAnatomy Toolbox
File System Utility Functions for 'NeuroAnatomy Toolbox'
Fast C++ Primitives for the 'NeuroAnatomy Toolbox'
Download House Price Data From Nationwide
Download House Price Data from Nationwide
Install the 'Natverse' Packages from Scratch
Obtain Unweighted Natural Strata that Balance Many Covariates
Classify Occurrences by Confidence Levels in the Species ID
Estimating the Error Variance in a High-Dimensional Linear Model
Regression with NA Values in Unordered Factors
Navigation Menu for Pipe-Friendly Data Processing
Navigated Weighting for the Inverse Probability Weighting
Bayes Classifier for Verbal Autopsy Data
Vignette Engine Wrapping IPython Notebooks
Vignette Engine Wrapping Jupyter Notebooks
Negative Binomial Factor Regression Models ('nbfar')
functions for non-bipartite optimal matching
Functions for Optimal Non-bipartite Matching
Functions for Optimal Non-Bipartite Matching
NCA Calculation and Population PK Model Diagnosis
NCA Calculations and Population Model Diagnosis
Noncompartmental Analysis of Pharmacokinetic Data for CDISC
Standardized Parameters
Noncompartmental Analysis for Pharmacokinetic Data for Report
Noncompartmental Analysis for Pharmacokinetic Report
Interface to Unidata netCDF (version 4 or earlier) format data
files
Interface to Unidata netCDF (Version 4 or Earlier) Format Data
Files
Helper functions for use with the ncdf4 package
Helper Functions for Use with the 'ncdf4' Package
Extract Metadata from 'NetCDF' Files as Data Frames
Nonconvex Penalized Estimation for Generalized Linear Models
Unified Algorithm for Non-convex Penalized Estimation for
Generalized Linear Models
High-level R Interface to NetCDF Datasets
Regularization paths for SCAD- and MCP-penalized regression
models
Regularization Paths for SCAD and MCP Penalized Regression
Models
Network-Based Dimensionality Reduction and Analysis
Wicked-Fast Streaming 'JSON' ('ndjson') Reader
NDVI Time series extraction and analysis
Efficient Network Enrichment Analysis Test
Negative Binomial Mixed Models Using Large-Sample Approximation
for Differential Expression Analysis of ScRNA-Seq Data
Estimating the number of essential genes in a genome
Estimating the Number of Essential Genes in a Genome
A Collection of Functions for Negligible Effect/Equivalence
Testing
Neighbourhood Functions for Local-Search Algorithms
Classification, Regression, Clustering with K Nearest Neighbors
R Port of the 'Scilab' Neldermead Module
Querying and Managing 'Neo4J' Databases in 'R'
Basic Data Wrangling for NEON Observational Data
Access to the Neotoma Paleoecological Database Through R
Interface to 'Neptune' Experiment Tracking and Management Tool
MLOps Metadata Store - Experiment Tracking and Model Registry
for Production Teams
Mann-Whitney-Wilcoxon Test for Nested Ranks
Nested Cross-Validation with 'glmnet' and 'caret'
Build Nesting or Hierarchical Structures
Handle Ambiguity of Protein Identifications from Shotgun
Proteomics
netClass: An R Package for Network-Based Microarray
Classification
netClass: An R Package for Network-Based Biomarker Discovery
Tool for Comparison and Visualization of Multiple Networks
Miscellaneous Functions for Network Analysis
Inference of Species Associations from Co-occurrence Data
Inference of Species Associations from Co-Occurrence Data
Inferring Causal Effects on Collective Outcomes under
Interference
Spatio-Network Generalised Linear Mixed Models for Areal Unit
and Network Data
Statistical Modeling with Network Cohesion
Network Analysis for Diffusion of Innovations
Analysis of Diffusion and Contagion Processes on Networks
Network Generator for Combinatorial Graph Problems
Network-Based Genome Wide Association Studies
Tools for Working with Samples of Networks
Micro-Macro Analysis for Social Networks
Network Meta-Analysis using Frequentist Methods
Tools for the study of scale free and small world networks
Statistical Entropy Analysis of Network Data
Measures of Network Segregation and Homophily
Retrieve Network Statistics Including Available TCP Ports
Network Analysis and Community Detection
Connect to the 'nettskjema.no' API of the University of Oslo
NetWeAvers: Weighted Averages for Networks
Network Reverse Engineering with Approximate Bayesian
Computation
Tools for Creating D3 JavaScript Network Graphs from R
Tools for using network reporting estimators.
Tools for using Network Reporting Estimators
Network Scale-Up Models for Aggregated Relational Data
Simulate bipartite graphs with fixed marginals through sequential importance sampling
Simulate bipartite graphs with fixed marginals through
sequential importance sampling
Simulate Bipartite Graphs with Fixed Marginals Through
Sequential Importance Sampling
Simulate Bipartite Graphs With Fixed Marginals Through
Sequential Importance Sampling
Assorted Tools for Identifying Important Nodes in Networks
(Impact, Expected Influence)
Tools for Identifying Important Nodes in Networks
Recursive Partitioning of Network Models
Functions to generate fMRI data including activated data, noise
data and resting state data.
Functions to Generate fMRI Data Including Activated Data, Noise
Data and Resting State Data
'Neuroconductor' Base Package with Helper Functions for 'nifti'
Objects
neuroim: R software for reading, writing and representing brain
imaging data.
Read, Write, and Process Brain Imaging Data
Data Structures and Handling for Neuroimaging Data
Preprocessing of Structural MRI for Multiple Neurodegenerative
Diseases
An R Toolbox for Psychologists, Neuropsychologists and
Neuroscientists
Toolbox for Psychologists, Neuropsychologists and
Neuroscientists
Test for a Neutral Evolutionary Model in Cancer Sequencing Data
A Better Alternative to the Hodrick-Prescott Filter
An Alternative to the Hodrick-Prescott Filter
True Discovery Guarantee by the New Focus Level Procedure
True Discovery Guarantee by Combining Partial Closed Testings
Statistical Tests to Compare Curves with Recurrent Events
Programmatically Collect Normalized News from (Almost) Any
Website
Semi-Supervised Model for Geographical Document Classification
Semisupervised Model for Geographical Document Classification
Advanced Tools for Building the Next Generation of 'Shiny'
Applications and Dashboards
Event Stream Abstraction using Interval Logic
Functions to Calculate Optimal Fourth Down Decisions in the
National Football League
Functions to Efficiently Access NFL Play by Play Data
Functions to Efficiently Simulate and Evaluate NFL Seasons
Nonparametric Failure Time Bayesian Additive Regression Trees
NGA Earthquake Ground Motion Prediction Equations
A Simple General Purpose N-Gram Tokenizer
Fitting the centered autologistic and sparse spatial generalized
linear mixed models for areal data
Fitting the Centered Autologistic and Sparse Spatial Generalized
Linear Mixed Models for Areal Data
Next-Generation Sequencing (NGS) Data Analysis Toolkit
Tools for working with the National Hydrography Dataset
Tools for Working with the National Hydrography Dataset
National Hospital Discharge Survey 2010 Data
A Minimum-Dependency 'R' Interface to the 'NHL' API
Scrapes the 'NHL' API for Statistical Analysis
Compiling the NHL Real Time Scoring System Database for easy use
in R
Non-Homogeneous Markov and Hidden Markov Multistate Models
Breast Cancer Survival and Therapy Benefits
Tools for Working with NHS Number Checksums
Markov Model Multiple Imputation for NIAID OS
(Niche) (R)egion and Niche (Over)lap Metrics for
Multidimensional Ecological Niches
Niche Region and Niche Overlap Metrics for Multidimensional
Ecological Niches
Tools for Ecological Niche Evolution Assessment Considering
Uncertainty
Common Analysis with Remote Sensing Data
Nonnegative Integer Solutions of Linear Diophantine Equations
with Applications
MCMC, Particle Filtering, and Programmable Hierarchical Modeling
Flexible BUGS-Compatible System for Hierarchical Statistical
Modeling and Algorithm Development
Adaptive Parallel Tempering for 'NIMBLE'
Bayesian Analyses of Radiocarbon Dates with NIMBLE
Distributions for Ecological Models in 'nimble'
Transformed Distributions for Improved MCMC Efficiency
Spatial Capture-Recapture (SCR) Methods Using 'nimble'
Sequential Monte Carlo Methods for 'nimble'
Principal Components Analysis using NIPALS with Gram-Schmidt
Orthogonalization
Principal Components Analysis using NIPALS or Weighted EMPCA,
with Gram-Schmidt Orthogonalization
National Information Platforms for Nutrition Anthropometric Data
Toolkit
Download Image Files from the 'NeuroImaging Tools and Resources
Collaboratory'
Noninferiority Tests with Variable Margins
Snow Water Equivalent Modeling with the 'Delta.snow' Model and
Empirical Regression Models
Tools for Geocoding Addresses in New Jersey using the 'NJOGIS'
API
Download and Analyze New Jersey Car Crash Data
Download, Analyze & Clean New Jersey Car Crash Data
Regression in the Normal Linear ADG Model
Wald Test of nonlinear restrictions for regression parameters
Wald Test of Nonlinear Restrictions and Nonlinear CI
Interface to the National Lakes Assessment
Automated Estimation of Sigmoidal and Piecewise Linear Mixed
Models
Linear and nonlinear mixed effects models
Linear and Nonlinear Mixed Effects Models
Non-linear mixed-effects modelling in nlme using differential equations
Non-linear mixed-effects modelling in nlme using differential
equations
Datasets and utility functions enhancing functionality of nlme
package.
Datasets and Utility Functions Enhancing Functionality of 'nlme'
Package
Visual Model Checking for Nonlinear Mixed Effect Model
Nonlinear Mixed Effects Models in Population Pharmacokinetics
and Pharmacodynamics
Nonlinear Mixed Effects Models in Population PK/PD
Nonlinear Mixed Effects Models in Population PK/PD, Data
Nonlinear Mixed Effects Models in Population PK/PD, Estimation
Routines
Nonlinear Mixed Effects Models in Population PK/PD, Extra
Support Functions
Nonlinear Mixed Effects Models in Population PK/PD, Plot
Functions
Functions for nonlinear least squares solutions
Functions for Nonlinear Least Squares Solutions
Nonlinear Network Reconstruction and Clustering Based on DCOL
(Distance Based on Conditional Ordered List)
Nonlinear Network Reconstruction, Clustering, and Variable
Selection Based on DCOL (Distance Based on Conditional Ordered
List)
Nonlinear Network, Clustering, and Variable Selection Based on
DCOL
Estimators of Non-Linear Cross-Validated Risks Optimized for
Small Samples
Nonlinear Regression Modelling using Robust Methods
Nonlinear Regression for Agricultural Applications
Higher Order Inference for Nonlinear Heteroscedastic Models
Non-Linear Relative Risk Estimation and Plotting
Setup, Run and Analyze 'NetLogo' Model Simulations from 'R' via
'XML'
Robust Non-Linear Regression using AIC Scores
Nonlinear regression in predictive microbiology
Nonlinear Regression in Predictive Microbiology
Fitting Structural Equation Mixture Models
Convenient Functions for Non-Linear Regression
Non-Linear Shrinkage Estimation of Population Eigenvalues and
Covariance Matrices
Non Linear Least Squares with Inequality Constraints
Fitting finite mixture of scale mixture of skew-normal
distributions.
Fitting nonlinear models with scale mixture of skew-normal
distributions.
Fitting Nonlinear Models with Scale Mixture of Skew-Normal
Distributions
Functions for Nonlinear Least Squares Solutions - Updated 2022
An R Package for Fitting Separable Nonlinear Models
Non-Linear Model Fitting of Time Distribution of Biological
Phenomena
Tools for nonlinear regression diagnostics
A nondecimated lifting transform for signal denoising
A Nondecimated Lifting Transform for Signal Denoising
Network Meta-Analysis using Integrated Nested Laplace
Approximations
The Plate Plot for Network Meta-Analysis Results
Complex Hierarchy Questions in Network Meta-Analysis
Thresholds and Invariant Intervals for Network Meta-Analysis
Non-Negative Matrix Factorization (NMF) using CUDA
Goodness of Fit Checks for Binomial N-Mixture Models
Understanding Nonlinear Mixed Effects Modeling for Population
Pharmacokinetics
Non-Negative Garrote Estimation with Penalized Initial
Estimators
Nearest Neighbors Matching of Case-Control Data
Feed-forward Neural Networks and Multinomial Log-Linear Models
Feed-Forward Neural Networks and Multinomial Log-Linear Models
Prediction Intervals of Multi-Layer Neural Networks
Time Series Forecasting with Neural Networks
k-Nearest Neighbor Join for Spatial Data
Non-Negative Lasso and Elastic Net Penalized Generalized Linear
Models
A Tool for Creating Custom Neural Networks in C++ and using Them
in R
The Lawson-Hanson NNLS algorithm for non-negative least squares
The Lawson-Hanson algorithm for non-negative least squares (NNLS)
The Lawson-Hanson algorithm for non-negative least squares
(NNLS)
Nearest Neighbor Methods for Spatial Patterns
The Number Needed to Treat (NNT) for Survival Endpoint
Supervised Data Transformation by Means of Neural Network Hidden
Layers
Supervised Data Transformation by Means of Neural Network Hidden
Layer
Connect to 'AWS Athena' using R 'AWS SDK' 'paws' ('DBI'
Interface)
Algorithmic Framework for Representational Learning on Graphs
Compute and visualize the Node Harvest estimator
Node Harvest for regression and classification
Node Harvest for Regression and Classification
Simulate DNA Alignments Using Node Substitutions
Compares the distribution of sister clades through a phylogeny
Compares the Distribution of Sister Clades Through a Phylogeny
Implementation of the Natural and Orthogonal InterAction (NOIA) model
Implementation of the Natural and Orthogonal InterAction (NOIA)
model
Estimation of Intrinsic and Extrinsic Noise from Single-Cell
Data
Noise Models for Classification Datasets
Cross-Entropy Optimisation of Noisy Functions
Noisy Stochastic Block Mode: Graph Inference by Multiple Testing
Noise Quantification in High Throughput Sequencing Output
Hierarchical Cluster Analysis of Nominal Data
Classify Names by U.S. Ethnicity or Leaf Nationality
Classify Names by Gender, U.S. Ethnicity, and Leaf Nationality
Calculate Total Points and Probabilities for Nomogram
Randomization Test for Sequences of Nominal Values
ROC-type analysis for non-binary gold standards
U.S. Census Regional and Demographic Data
Causal Inference in the Presence of Treatment Noncompliance
Under the Binary Instrumental Variable Model
Bayesian Analysis of Randomized Experiments with Non-Compliance
Weighted Average Ensemble without Training Labels
Invariant Causal Prediction for Nonlinear Models
R package for nonlinear time series analysis
Loading NONMEM Output Files and Simulate with Parameter
Uncertainty
Loading NONMEM Output Files with Functions for Visual Predictive
Checks (VPC) and Goodness of Fit (GOF) Plots
Create and Evaluate NONMEM Models in a Project Context
A Collection of Nonparametric Hypothesis Tests
Nonparametric Methods for Measuring Efficiency and Productivity
Stratification and matching by the propensity score
Detecting, combining and filtering isotope, adduct and homologue
series relations in high-resolution mass spectrometry (HRMS)
data
Detecting, Combining and Filtering Isotope, Adduct and Homologue
Series Relations in High-Resolution Mass Spectrometry (HRMS)
Data
Detecting Isotope, Adduct and Homologue Relations in LC-MS Data
Quantized simulation data of isotope pattern centroids
Non-Parametric Concordance Coefficient: A Non-Parametric
Concordance Test
Normal (1-d) Mixture Models {Classes and Methods}
Normal (1-d) Mixture Models (S3 Classes and Methods)
Normal aka Gaussian (1-d) Mixture Models (S3 Classes and
Methods)
Arctic Ice Studio's Nord and Group of Seven Inspired Colour
Palettes
Arctic Ice Studio's Nord and Group of Seven Inspired Colour
Palettes for 'ggplot2'
Dataset for climate analysis with data from the Nordic region
Dataset for Climate Analysis with Data from the Nordic Region
Track Geo Code Changes in all Regional Granularity in Norway
Tracking Geo Code Change of Regional Granularity in Norway
Analysis of Multivariate Normal Datasets with Missing Values
Analysis of multivariate normal datasets with missing values
Analysis of Incomplete Multivariate Data under a Normal Model
Package for normal of order p distributions (GED)
Package for exponential power distributions (EPD)
Routines for Exponential Power Distribution
Normalisation of Multiple Variables in Large-Scale Datasets
Normal Mixture Models (1-d) {Classes and Methods}
Neyman Smooth Tests of Normality for the Errors of ARMA Models
Assessing Normality of Stationary Process
Compute Node Overlap and Segregation in Ecological Networks
A Forward Agent-Based Transmission Chain Simulator
Print Text from 'Shiny' User Interface (Support Markdown Syntax)
to Pdf or 'Word' Report
Send push notifications to your smartphone via pushover.net
(ACCOUNT REQUIRED!)
Send Alerts to your Cellphone and Phillips Hue Lights
Data for Lai et al. (2021) Appl. Veg. Sci.
Dataset from the Novel Forests of Singapore
NOVEL Integration of the Sample and Thresholded (NOVELIST)
Correlation and Covariance Estimators
Nowcasting Analysis and Create Real-Time Data Basis
Nowcast Analysis and Create Real-Time Data Basis
Predicting Economic Variables using Dynamic Factor Models
Nonparametric kernel smoothing methods for mixed datatypes
Nonparametric kernel smoothing methods for mixed data types
Nonparametric Kernel Smoothing Methods for Mixed Data Types
Nonparametric Confidence Intervals for Ratios
Exact Nonparametric Hypothesis Tests for the Mean, Variance and
Stochastic Inequality
Nonparametric Rank Test for Interaction in Factorial Designs
with Repeated Measures
Nonparametric Interaction Tests for Factorial Designs with
Repeated Measures
Kernel-Based Nonparametric ROC Regression Modelling
Parallel nonparametric kernel smoothing methods for mixed data
types
Non-Parametric Measures of Actigraphy Data
Nonparametric Analysis of Longitudinal Data in Factorial
Experiments
Nonparametric Analysis of Multivariate Data in Factorial Designs
Perform multiple comparisons and compute simultaneous confidence
intervals for the nonparametric relative contrast effects.
Multiple Comparisons and Simultaneous Confidence Intervals
Nonparametric Tests for Main Effects, Simple Effects and
Interaction Effect in a Factorial Design with Censored Data
Non Parametric Test for Detecting Changes in the Copula
Some nonparametric tests for change-point detection in
(multivariate) observations
Some Nonparametric CUSUM Tests for Change-Point Detection in
Possibly Multivariate Observations
Some Nonparametric Tests for Change-Point Detection in Possibly
Multivariate Observations
Neyman-Pearson Classification via Cost-Sensitive Learning
Nonparametric Estimation in Mixture Cure Models
Normalised prediction distribution errors for nonlinear
mixed-effect models
Normalised prediction distribution errors for nonlinear mixed-effect models
Normalised Prediction Distribution Errors for Nonlinear
Mixed-Effect Models
Planning and Analysing Survival Studies under Non-Proportional
Hazards
Sample Size Calculation under Non-Proportional Hazards
Non-Proportional Hazards in Randomized Controlled Trials
Access the U.S. National Provider Identifier Registry API
Plotting non-parametric LOD scores from multiple input files
Plotting linkage and association results
Plotting Linkage and Association Results
Nonparametric Models for Longitudinal Data
Nonparametric maximum likelihood estimation for random effect models
Nonparametric maximum likelihood estimation for random effect
models
Nonparametric Maximum Likelihood Estimation for Random Effect
Models
Nonparametric Comparison of Multivariate Samples
Nonparametric Tests for Equality of Location Against Ordered
Alternatives
Nonparametric Partially-Balanced Incomplete Block Design
Analysis
Vegetation Phenological Cycle and Anomaly Detection using Remote
Sensing Data
Nonparametric Regression via Smoothing Splines
Nonparametric Estimation of the Derivatives of a Regression
Function
Nonparametric Estimation of Regression Models with
Factor-by-Curve Interactions
Robust Data-Driven Statistical Inference for Local Polynomial
Regression and Kernel Density Estimation
Nonparametric Robust Estimation and Inference Methods using
Local Polynomial Regression and Kernel Density Estimation
Neyman-Pearson (NP) Classification Algorithms and NP Receiver
Operating Characteristic (NP-ROC) Curves
Nonparametric Rotations for Sphere-Sphere Regression
Nonparametric Quantile Regression -- Defunct
Nonparametric and Stochastic Efficiency and Productivity
Analysis
Package for Nonparametric Statistical Methods using R
Validate Instrumental Variables using NPS
A generalization of the nonparametric seasonality tests of
Hewitt et al. (1971) and Rogerson (1996)
Generalization of Hewitt's Seasonality Test
Sample Size and Power Calculation for Common Non-Parametric
Tests in Survival Analysis
Nonparametric Bootstrap and Permutation Tests
Nonparametric Multiple Change Point Detection Using WBS
NRI for risk prediction models with time to event data
NRI for risk prediction models with time to event and binary
response data
NRI for Risk Prediction Models with Time to Event and Binary
Response Data
Methods for Fitting and Simulating Non-Stationary ARFIMA Models
Prepares and Writes Files to Submit to the National Student
Clearinghouse
Numerical Standard Errors Computation in R
Fetch Data from 'National Stock Exchange (India)'
Bhavcopy from National Stock Exchange(NSE) India of Equities and
Derivatives(F&O)
Bhavcopy and Live Market Data from National Stock Exchange(NSE)
India of Equities and Derivatives(F&O)
Bhavcopy and Live Market Data from National Stock Exchange(NSE)
India of Equities and Derivatives (F&O)
Bhavcopy and Live Market Data from National Stock Exchange (NSE)
India for Equities and Equity Derivatives (F&O)
Bhavcopy and Live Market Data from National Stock Exchange (NSE)
& Bombay Stock Exchange (BSE) India for Equities and Equity
Derivatives (F&O)
Tools for Lazy and Non-Standard Evaluation
A Clean API for Lazy and Non-Standard Evaluation
Elitist Non-dominated Sorting Genetic Algorithm based on R
Elitist Non-Dominated Sorting Genetic Algorithm
An Implementation of Non-Dominated Sorting Genetic Algorithm III
for Feature Selection
Datasets to Accompany Hollander, Wolfe, and Chicken NSM3
Inference for Multiple Change-Points in Linear Models
Nonparametric and Semiparametric Mixture Estimation
Interface to National Sleep Research Resource
Statistical Inference for Network Time Series
Test of accuracy of as.character() for a numeric input using the
standard arithmetic.
Create a Kaplan-Meier Plot with Numbers at Risk
Numeric routines for optically stimulated luminescence dating
Numeric Routines for Optically Stimulated Luminescence Dating
Haplotype-Aware CNV Analysis from scRNA-Seq
Compute the Probability Distribution of the Number of Alleles in
a DNA Mixture
Validate, Compare and Format Identification Numbers from Brazil
Structure Learning with Copula Graphical Model
R Wrapper for the Canadian Nutrient File API
Audioscrobbler data for "R in a Nutshell"
Beispieldaten zu "R in a Nutshell" [deutsche Ausgabe]
The n-vector Approach to Geographical Position Calculations
using an Ellipsoidal Model of Earth
Combination of visualization functions for nuclear data using
ggplot2 and ggcolpairs.
Multivariate Normal Variance Mixtures (Including Student's t
Distribution for Non-Integer Degrees of Freedom)
R functions for NetWorkSpaces and Sleigh
Data about flights departing NYC in 2013.
Import, Clean and Update Data from the New Zealand Freshwater
Fish Database
Accessing Data Stored in 'LaBB-CAT' Instances
Driving Offences in New Zealand Between 2009 and 2016
Reconstruction of Transmission Chains from Surveillance Data
General Purpose 'Oai-PMH' Services Client
Computation of the Orbit-Aware Quad Census
Multiple Sclerosis Lesion Segmentation using Magnetic Resonance
Imaging (MRI)
A factory of self-describing properties.
'RStudio' Addin for Removing Objects from the Global Environment
Based on Patterns and Object Type
3D Rendering Using Obliquely Projected Cubes and Cuboids
modified random Forest using non linear regression in the node
Oblique Random Forests from Recursive Linear Model Splits
Oblique Random Forests for Right-Censored Time-to-Event Data
An R package to assess agreement between observers.
Sensitivity analysis for Observational studies.
Sensitivity Analysis for Observational Studies
Optimal Classification Roll Call Analysis Software
Querying and Managing Large Biodiversity Occurrence Datasets
Characterizing and Filtering Species Occurrence Data
Probability Functions for Occupancy Distributions
High-Dimensional Multiscale Online Changepoint Detection
Ordered Composite Endpoints with Censoring
Plotting Toolbox for 2D Oceanographic Data
A Plotting Toolbox for 2D Oceanographic Data
Oceanographic Data Sets for 'oce' Package
Order Constrained Solutions in k-Means Clustering
Gaussian Model-Based Clustering with Outliers
Gibbs sampler for ordered compositional data
Regression for Rank-Indexed Compositional Data
Interface to Open Collaboration Services (OCS) REST API
Manipulate and Map Origin-Destination Data
Connect to ODBC Compatible Databases (using the DBI Interface)
Odds Ratios, Contingency Table, and Model Significance from a
Generalized Linear Model Object
Access Live Sports Odds from the Odds API
Odds Ratio Calculation for GAM(M)s & GLM(M)s
Solve ODE for GUTS-RED-SD and GUTS-RED-IT Using Compiled Code
Solvers for Ordinary Differential Equations
Outlier Detection Using Partitioning Clustering Algorithms
Sweave processing of OpenDocument format files
Sweave processing of Open Document format files
Sweave processing of Open Document Format (ODF) files
Support for odfWeave on the survey package
Convert 'ODK' or 'XLSForm' to 'SPSS' Data Frame
Access Scottish Health and Social Care Open Data
Optimal design and performance of random intercept and slope
models.
Optimal Design and Statistical Power of Cost-Efficient
Multilevel Randomized Trials
Optimal Design and Statistical Power of Multilevel Randomized
Trials
Optimal Design and Statistical Power for Multilevel Experiments
Use the Observatory of Economic Complexity's API in R
Observatory of Economic Complexity API Wrapper and Utility
Program
Orthogonalizing EM: Penalized Regression for Big Tall Data
May 2020 Occupational Employment and Wage Statistics
May 2021 Occupational Employment and Wage Statistics
A Meta-Analysis Approach with Filtering for Identifying
Gene-Level Gene-Environment Interactions with Genetic
Association Data
Enhanced 'R Markdown' Format for 'Word' and 'PowerPoint'
Manipulation of Microsoft Word and PowerPoint Documents
Detect Multiple Change Points from Time Series
Estimation of Ordered Generalized Linear Models
Modeling of Ordinal Random Variables via Softmax Regression
Ordinal Higher-Order Exploratory General Diagnostic Model for
Polytomous Data
Crosstab and Statistical Tests for OII MSc Stats Course
Crawler and Scraper for Open Journal System ('OJS')
Crawler and Data Scraper for Open Journal System ('OJS')
Retrieve Oklahoma Mesonet climatological data
Computes some Measures of OLL-G Family of Distributions
Odd Log-Logistic Generalized Gamma Probability Distribution
Tools for Teaching and Learning OLS Regression
Tools for Building OLS Regression Models
filter the molecular descriptors for QSAR
Cell-Type-Specific Association Testing in Bulk Omics Experiments
Helper Tools for Managing Data, Dates, Missing Values, and Text
Model and Solve Mixed Integer Linear Programs
A Solver for 'ompr' that Uses the R Optimization Infrastructure
('ROI')
A Metabolomics Analysis Tool for Intuitive Figures and
Convenient Metadata Collection
Data Sets for Keith McNulty's Handbook of Graphs and Networks in
People Analytics
Names Given to Babies in Ontario Between 1917 and 2018
Templated Reporting Workflows in Word and PowerPoint
Maximum likelihood tree models for oncogenesis
Fast, Universal, and Intuitive Computing on Large-Scale
Single-Cell Data
Maximum Homogeneity Clustering for Univariate Data
Software for constructing genetic maps in outcrossing species
Software for constructing genetic maps in experimental crosses:
full-sib, RILs, F2 and backcrosses
Construction of Genetic Maps in Experimental Crosses: Full-Sib,
RILs, F2 and Backcrosses
Construction of Genetic Maps in Experimental Crosses
One-Way Tests for Independent Groups Designs
One-Way Tests in Independent Groups Designs
Online Bayesian Methods for Change Point Analysis
Online Change Point Detection in High-Dimensional Covariance
Structure
Detect Changepoints in Multivariate Time Series
Online Fitting of Time-Adaptive Lasso Vector Auto Regression
Forecast Modelling for Online Applications
Import Public Health Ontario's Ontario Marginalization Index
Helper Functions for Point Pattern Analysis
Interactive Annotation of Characters with Biological Ontologies
Functions for Visualising Sets of Ontological Terms
Functions for Calculating Ontological Similarities
Create Validation Tests for Automated Content Analysis
Class Unions, Matrix Operations, and Color Schemes for OOMPA
Helper Functions for Class Object-Oriented Programming
Optimized Automated Gaussian Mixture Assessment
An Implementation of Ordinal Pattern Analysis
'Opal' Data Repository Client and 'DataSHIELD' Utils
Optimal Distribution Preserving Down-Sampling of Bio-Medical
Data
Option Pricing and Estimation of Financial Models in R
EBGM Scores for Mining Large Contingency Tables
EBGM Disproportionality Scores for Adverse Event Data Mining
Easily Install and Load the 'openMSE' Packages
Apache OpenNLP Jars and Basic English Language Models
An Open Source Implementation of the 'ArcGIS' Toolbox 'STARS'
An R Client-Side Interface to the 'OpenSky' API
An R Package to Retrieve, Analyze and Visualize Air Traffic Data
Retrieval, Analysis and Visualization of Air Traffic Data
Client to Access 'Openaddresses.io' Data
Open-source tools for the analysis of air pollution data
Tools for the analysis of air pollution data
Tools for the Analysis of Air Pollution Data
Create Interactive Web Maps of Air Pollution Data
Getting Bibliographic Records from 'OpenAlex' Database Using
'DSL' API
R Client for Querying the UK 'Open Banking' ('Open Data') API
OpenCPU framework for embedded statistical computation and
reproducible research.
The OpenCPU system for embedded scientific computing and
reproducible research.
A System for Embedded Scientific Computing and Reproducible
Research with R
Embedded Scientific Computing and Reproducible Research with R
Bindings to 'OpenCV' Computer Vision Library
Access the City of Toronto Open Data Portal
Open Intro data sets and supplement functions
OpenIntro data sets and supplement functions
OpenIntro data sets and supplemental functions
Data Sets and Supplemental Functions from 'OpenIntro' Textbooks
Data Sets and Supplemental Functions from 'OpenIntro' Textbooks
and Labs
A 'Prometheus' Client for R Using the 'OpenMetrics' Format
Client for the Data API of openSenseMap.org
Toolkit for Encryption, Signatures and Certificates Based on
OpenSSL
An Open-Source Loader for Bruker's timsTOF Data Files
Tools for Creating and Analysing Air Trajectory Data
Utilities for working with R's operators
Utilities for Working with R's Operators
Additional binary operators for the R language
A Tool for Analyzing Opinions in a Text Document
Analyzing the Opinions in a Big Text Document
Tools for OmniLog(R) Phenotype Microarray data
Tools for analysing OmniLog(R) Phenotype Microarray data
Analysing Phenotype Microarray and Growth Curve Data
Example data for analysing OmniLog(R) Phenotype Microarray data
Example data for analyzing OmniLog(R) Phenotype Microarray data
Package for analysis and visualization of metagenes
Optimal Combinations of Diagnostic Tests Based on AUC
Estimation of optimal number of biomarkers for two-group
microarray based classifications at a given error tolerance
level for various classification rules
Estimation of Optimal Number of Biomarkers for Two-Group
Microarray Based Classifications at a Given Error Tolerance
Level for Various Classification Rules
Determine Optimal Clustering Algorithm and Number of Clusters
Optimal Designs for Estimating the Slope Divided by the
Intercept
Optimization Toolbox for solving linear systems
Optimization Toolbox for Solving Linear Systems
'surv' Object Confidence Bands Optimized by Area
Optimal Block Designs for Two-Colour cDNA Microarray Experiments
Calculating Optimal and D-Augmented Designs
A set of tools to support optimization methods (function
minimization with at most bounds and masks).
Tools to Support Optimization Possibly with Bounds and Masks
Miscellaneous functions for finance / credit risk analysts
Miscellaneous functions for (primarily) finance / credit risk
analysts
Optimum Contribution Selection and Pedigree Analysis
Optimum Contribution Selection and Population Genetics
Linear, Quadratic, and Rational Optimization
Likelihood Based Optimal Partitioning for Indicator Species
Analysis
Likelihood Based Optimal Partitioning and Indicator Species
Analysis
Graphical and Numerical Checks for Mode-Finding Routines
Parallel Versions of the Gradient-Based optim() Methods
Parallel Version of the L-BFGS-B Optimization Method
Bayesian Methods for Optimal Threshold Estimation
Flexible Optimization of Complex Loss Functions with State and
Parameter Space Constraints
Unified Framework for Numerical Optimizer
Optimos Prime Helps Calculate Autoecological Data for Biological
Species
A Replacement and Extension of the 'optim' Function
R port of the Scilab optimsimplex module
R Port of the 'Scilab' Optimsimplex Module
Model Based Diagnostics for Multivariate Cluster Analysis
A replacement and extension of the optim() function
A Replacement and Extension of the optim() Function
Expanded Replacement and Extension of the 'optim' Function
Utilizes the Black-Scholes Option Pricing Model to Perform
Strategic Option Analysis and Plot Option Strategies
Optimal Mixture Weights in Multiple Importance Sampling
Determine Optimum Stocking Times Used in Fishery Enhancements
Optimal partitioning of similarity relations
Optimal Partitioning of Similarity Relations
Optimal Row-Column Designs for Two-Colour cDNA Microarray
Experiments
Targeted Stable Balancing Weights Using Optimization
OPUS Miner Algorithm for Filtered Top-k Association Discovery
Order Restricted Assessment Of Microarray Titration Experiments
Orca: Counting graphlet orbits in sparse graphs
Computation of Graphlet Orbit Counts in Sparse Graphs
Subspace Clustering Based on Arbitrarily Oriented Projected
Cluster Generation
Estimate procedure in case of first order autocorrelation
Estimate Procedure in Case of First Order Autocorrelation
Modelling comparison data with ordinal response
Separating Location and Dispersion in Ordinal Regression Models
Selection and/or Smoothing of Ordinal Predictors
Selection, Fusion, Smoothing and Principal Components Analysis
for Ordinal Variables
Ordered Beta Regression Models with Brms
Likelihood-Based Continual Reassessment Method (CRM) Dose
Finding Designs
Ordered Lasso and Time-Lag Sparse Regression
Ordered Lasso and Time-lag Sparse Regression
Test, Check, Verify, Investigate the Monotonic Properties of
Vectors
Sampling from Order Statistics of New Families of Distributions
Sampling from k-th Order Statistics of New Families of
Distributions
Efficiently Generates Random Order Statistic Variables
Ordinal Data Clustering, Co-Clustering and Classification
Ordinal Regression Analysis for Continuous Scales
Ordinal Forests: Prediction and Class Width Inference with
Ordinal Target Variables
Ordinal Forests: Prediction and Variable Ranking with Ordinal
Target Variables
Co-Clustering of Ordinal Data via Latent Continuous Random
Variables
Analysis of Repeatability and Reproducibility Studies with
Ordinal Measurements
Bayesian Ordinal Regression for High-Dimensional Data
Ordinal Regression for High-dimensional Data
Ordinal Regression for High-Dimensional Data
A 'tidyverse' Extension for Ordinations and Biplots
An R Interface to the Oniguruma Regular Expression Library
An R Interface to the Onigmo Regular Expression Library
Large Amplitude Oscillatory Shear (LAOS)
Connector to the Objective Revision Evaluation Service (ORES)
Analyse Text Files Created by Emacs' Org mode
Shortcuts for File Creation with Informative Prefixes
Explicitly Qualifying Namespaces by Automatically Adding 'pkg::'
to Functions
The package deals with Operations Research LOCational Analysis models
The package deals with Operations Research LOCational Analysis
models
Operations Research LOCational Analysis Models
Spanish version of orloca package. Modelos de localizacion en
investigacion operativa
Fitting Semiparametric Cumulative Probability Models for Big
Data
Advanced Plotting of Ordinal Regression Models
Rigorous - 'NIfTI' + 'ANALYZE' + 'AFNI' : Input / Output
Rigorous - NIfTI+ANALYZE+AFNI Input / Output
Rigorous - NIfTI + ANALYZE + AFNI : Input / Output
Southern Ocean Frontal Distributions (Orsi)
Convertinging Odds Ratio to Relative Risk with Partial Data
Information
Converting Odds Ratio to Relative Risk in Cohort Studies with
Partial Data Information
Multivariate Logistic Regressions Using Orthogonalized
Residuals.
Multivariate Logistic Regressions Using Orthogonalized Residuals.
An Orthogonality Constrained Optimization Approach for
Semi-Parametric Dimension Reduction Problems
Semi-Parametric Dimension Reduction Models Using Orthogonality
Constrained Optimization
Collection of functions for orthogonal polynomials
Collection of functions for orthogonal and orthonormal polynomials
Collection of functions for orthogonal and orthonormal
polynomials
Collection of Functions for Orthogonal and Orthonormal
Polynomials
Design and analysis of observational studies
Design, Planning and Analysis of Observational Studies
Optimal Subset Cardinality Regression (OSCAR) Models Using the
L0-Pseudonorm
Orthogonal Signal Deconvolution for Spectra Deconvolution in
GC-MS and GCxGC-MS Data
Interface to the 'Open Science Framework' ('OSF')
Raw System Credential Store Access from R
Importing and working with OpenStreetMap-Data
Import OpenStreetMap Data as Simple Features or Spatial Objects
Import 'OpenStreetMap' Data as Simple Features or Spatial
Objects
Download and Read OpenStreetMap Data Extracts
Download and Import Open Stree tMap Data Extracts
Download and Import Open Street Map Data Extracts
Construction of Geostatistical Sampling Designs with OSM Data
Object Oriented Simulator of Marine Ecosystems
Customisable Images of OpenStreetMap Data
Utility Functions for Open Systems Pharmacology R Packages
Quadratic Programming Solver using the 'OSQP' Library
Interface Between R and the OpenStreetMap-Based Routing Service
OSRM
One Time Password Generation and Verification
An R Wrapper for the 'OpenTripPlanner' REST API
An R Autograding Extension for Otter-Grader
Companion Tools for Open-Source Tools for Training Resources
(OTTR)
Summarizing OTU Table Regarding the Composition, Abundance and
Beta Diversity of Abundant and Rare Biospheres
Ornstein-Uhlenbeck models for phylogenetic comparative hypotheses
Ornstein-Uhlenbeck Models for Phylogenetic Comparative
Hypotheses
Ornstein-Uhlenbeck models for phylogenetic comparative
hypotheses
Multivariate Outlier Detection and Replacement
outbreaker: Bayesian inference of outbreak dynamics based on
epidemiological and genetic information.
Bayesian inference of outbreak dynamics based on epidemiological
and genetic information.
Bayesian reconstruction of disease outbreaks by combining
epidemiologic and genomic data
Bayesian Reconstruction of Disease Outbreaks by Combining
Epidemiologic and Genomic Data
A Collection of Outlier Ensemble Algorithms
Explainable Outlier Detection Through Decision Tree Conditioning
Install and Run Programs, Outside of R, Inside of R
Overdispersion in Count Data Multiple Regression Analysis
Estimates of coefficient of overlapping for animal activity
patterns
Estimates of Coefficient of Overlapping for Animal Activity
Patterns
Estimation of Overlapping in Empirical Distributions
Test Overlapping of Polygons Against Random Rotation
Easily Extracting Information About Your Data
A Package for Importing Data from Our World in Data
Generalized Linear Models Regularized with the Sorted L1-Norm
Interface to 'OxCal' Radiocarbon Calibration
An Interface to the Oxford COVID-19 Government Response Tracker
API
An R API to the Oxford COVID-19 Database
Scans R Projects for Vulnerable Third Party Dependencies
Plot the Australian coastline and states
Plot the Australian Coastline and States
Estimation of partial attributable risks (PAR) from case-control data
Estimation of attributable and partial attributable risks (AR
and PAR) and visualization of attributable risks from
case-control data
Benchmarking and Rescaling R2 using Noise Percentile Analysis
Estimation of an ODE Model by Parameter Cascade Method
Estimation of an Ordinary Differential Equation Model by
Parameter Cascade Method
Generalized Least Square in comparative Phylogenetics
Estimating Multiple Gaussian Graphical Models (GGM) in Penalized
Gaussian Mixture Models (GMM)
Pseudo-Realizations for Gaussian Process Excursions
Permutation Significance for Random Forests
Test of periodicity using response surface regression
Test of Periodicity using Response Surface Regression
A Multiscale Framework for Data Analysis of Global Precipitation
Permutations of Treatment Labels and TITAN2 Analysis
Performance Attribution for Equity Portfolios
PAC-Bayesian Estimation and Prediction in Sparse Additive
Models.
Decision Analysis Modelling Package with Parameters Estimation
Ability from Individual Patient Level Data
A few useful functions for statisticians
A few Useful Functions for Statisticians
Multi-Block Partial Least Squares Discriminant Analysis
Computation and Visualization of Package Download Counts and
Percentiles
Comfortable Search for R Packages on CRAN
Comfortable Search for R Packages on CRAN Directly from the R
Console'
Comfortable Search for R Packages on CRAN Directly from the R
Console
Comfortable Search for R Packages on CRAN, Either Directly from
the R Console or with an R Studio Add-in
Track R Package Downloads from RStudio's CRAN Mirror
An Opinionated Framework for Using 'JavaScript'
A dependency management system for projects and their R package
dependencies
A Dependency Management System for Projects and their R Package
Dependencies
Procrustes Application to Cophylogenetic Analysis
iPACOSE, PACOSE and other methods for covariance selection
Testing for Partial Copulas and the Simplifying Assumption in
Vine Copulas
Supplementary Tools for R Packages Developers
Quickly Get Datetime Data Ready for Analysis
Attributable Fraction Function for Censored Survival Data
Book Companion for Processing and Analyzing Financial Data with
R
Read, Manipulate and Visualize 'Pairwise mApping Format' Data
Paginate the HTML Output of R Markdown with CSS for Print
An API Client for Wikimedia Traffic Data
Single Cell Analysis and Differential Expression
Analyze Bacterial Pangenomes in R with 'Pagoo'
Use XKCD's "Painbow" Colormap in ggplot2
Creation and Manipulation of Color Palettes
Confidence intervals for the ratio of locations and for the
ratio of scales of two paired samples
Rasch Model Parameters by Pairwise Algorithm
Confidence intervals for two sample comparisons
Confidence Intervals for Two Sample Comparisons
Calculate and plot unadjusted confidence intervals for two sample comparisons
Another Approach to Package Installation
Significance tests for palaeoenvironmental reconstructions
Significance Tests for Palaeoenvironmental Reconstructions
Prepare and Explore Data for Palaeobiological Analyses
Partitioned Local Depths for Community Structure in Data
Partitioned Local Depth for Community Structure in Data
Modeling evolution in paleontological time-series
Modeling evolution in paleontological time-series (alternate paramaterization)
paleobioDB: a package for downloading, visualizing and
processing data from Paleobiology Database.
Download and Process Data from the Paleobiology Database
paleofire: an R package to analyse sedimentary charcoal records
from the Global Charcoal Database to reconstruct past biomass
burning
Analysis of Charcoal Records from the Global Charcoal Database
Geometric Morphometric Tools for Paleobiology
Pattern-Oriented Modeling Framework for Coupled Niche-Population
Paleo-Climatic Models
Paleontological and Phylogenetic Analyses of Evolution
Comprehensive Collection of Color Palettes
Create Colour Scales and Legend from Continuous or Categorical
Vectors
GPL Palettes Copied from Gimp and Inkscape
GPL Palettes Copied from 'Gimp' and 'Inkscape'
Fitting Point Process Models via the Palm Likelihood
Palmer Archipelago (Antarctica) Penguin Data
Partially Additive (Generalized) Linear Model Trees
Poisson Approximation for LOcal Motif Assessment
Color Palettes, Colormaps, and Tools to Evaluate Them
WA, WA-PLS, MW and POM for paleolimnology
Principal Axes Methods for Contingency Tables with Partition
Structures on Rows and Columns
Power analysis for random effects in mixed models
Power Analysis for Random Effects in Mixed Models
Piece-Wise Exponential Additive Mixed Modeling Tools
Piece-Wise Exponential Additive Mixed Modeling Tools for
Survival Analysis
Implementation of the Panel Data Approach Method for Program
Evaluation
Pam: prediction analysis for microarrays
PAM: prediction analysis for microarrays
Pam: Prediction Analysis for Microarrays
Multiple imputation for multivariate panel or clustered data
Multiple Imputation for Multivariate Panel or Clustered Data
Calculation and Plot of Gene Correlationship in TCGA/GTEx/CCLE
Manage and Run Universal Converter 'Pandoc' from 'R'
Estimation of Linear AR(1) Panel Data Models with
Cross-Sectional Heteroskedasticity and/or Correlation
Visualizing Panel Data with Dichotomous Treatments
Regression Models and Utilities for Repeated Measures and Panel
Data
Prepare American Psychological Association Journal Articles with
R Markdown
View Medical Research Images using the Papaya JavaScript Library
Prevalence Adjusted PPV Confidence Interval
A toolbox for writing Sweave or other LaTeX-based papers and
reports
A Toolbox for Writing 'knitr', 'Sweave' or Other 'LaTeX'-Based
Papers and Reports
A Toolbox for Writing Pretty Papers and Reports
Distance Recordings from a Paper Plane Folding/Flying Experiment
Define and Work with Parameter Spaces for Complex Algorithms
Parallel Distance Matrix Computation using Multiple Threads
Methods for combining independent subset Markov chain Monte
Carlo (MCMC) posterior samples to estimate a posterior density
given the full data set
Combining Subset MCMC Samples to Estimate a Posterior Density
A Parallel-Voting Algorithm for many Classifiers
Unified interface to some popular parallelization back-ends for
interactive usage and package development.
Unified interface to Some Popular Parallelization Back-ends for
Interactive Usage and Package Development
Unified Interface to Parallelization Back-Ends
'Htmlwidget' for a Parallel Coordinates Plot
A Parallel Voting Version of Support Vector Machine
A Parallel-Voting Version of the Support-Vector-Machine
Algorithm
Automate parallelization of function calls by means of dynamic
code analysis
Parallel Partitioning-Around-Medoids (PAM) for Big Sets of Data
A Fast and Lightweight R6 Parameter Interface
A Shiny GUI for some Parameter Estimation Examples
Numeric and Visual Comparisons of Heterogeneity in Parametric
Models
Parametric Linkage and Other Pedigree Analysis in R
Run a Function Iteratively While Varying Parameters
Horn's Test of Principal Components/Factors
Interactive Parallel Categories Diagrams for 'easyalluvial'
'Htmlwidget' for 'd3.js' Parallel Coordinates Chart
Regularized estimation of partial correlation matrices
Parallelized functions for palaeoecological and
palaeogeographical analysis
Portfolio Allocation and Risk Management Applications
Parallel Mutual Information estimation for Gene Network
reconstruction.
Parallel Mutual Information Estimation for Gene Network
Reconstruction
Parse and Manipulate Research Patient Data Registry ('RPDR')
Text Queries
Recognize and parse dates in various formats, including all ISO
8601 formats
Recognize and Parse Dates in Various Formats, Including All ISO
8601 Formats
Parallelized Dynamic Web-Scraping Using 'RSelenium'
Parallel Dynamic Web-Scraping Using 'RSelenium'
Parse Thermo MSF Files and Estimate Protein Abundances
Parse ThermoFisher MSF Files and Estimate Protein Abundances
Formal Parser and Related Tools for R Markdown Documents
A Common API to Modeling and Analysis Functions
Partitioning using deletion, substitution, and addition moves
Partitioning Using Deletion, Substitution, and Addition Moves
Optimisation with Particle Swarm Optimisation
A Graph Based Particle Simulator Based on D3-Force
Agglomerative Partitioning Framework for Dimension Reduction
Methods for Calculating the Loreau & Hector 2001 BEF Partition
Implements Measures for the Comparison of Two Partitions
Compute a distance metric between two partitions of a set
Periodic Autoregressive Time Series Models
A Laboratory for Recursive Part(y)itioning
An Implementation of Process-Aware Stealthy Attack
Detection(PASAD)
Prediction and Stability Selection of Tuning Parameters
Power and Sample Size for Linear Mixed Effect Models
Travel Smoothly Between Country Name and Code Formats
'RStudio' Addin to Paste the Clipboard as a Comment Block or a
'roxygen' Block
Package for Analysis of Space-Time Ecological Series
Phylogenetic Assembly with Soft Taxonomic Inferences
Package to Patch '.dvi' or '.synctex' Files
Communication between Editor and Viewer for Literate Programs
Communication Between Editor and Viewer for Literate Programs
Access USPTO Bulk Data in Tidy Rectangular Format
Classification using biological pathways as prior knowledge
Basic Functions for Drawing Path Diagrams
Basic functions for drawing path diagrams
Pathway Enrichment Analysis Utilizing Active Subnetworks
Enrichment Analysis Utilizing Active Subnetworks
Compute Deviation and Correspondence Between Spatial Paths
Path Component Fit Indices for Latent Structural Equation Models
Segmentation Trees in Partial Least Squares Path Modeling
Pathmox Approach of Segmentation Trees in Partial Least Squares
Path Modeling
An Imputation Approach to Estimating Path-Specific Causal
Effects
Wrangle, Analyze, and Visualize Animal Movement Data
Feature Extraction from Female Brown Anole Lizard Dorsal
Patterns
Quantification of Color Pattern Variation
Versatile Pie Chart using Patterns, Colors, and Images
Versatile Pie Charts, Bar Charts and Box Plots using Patterns,
Colors and Images
Versatile Pie Charts, Ring Charts, Bar Charts and Box Plots
using Patterns, Colors and Images
Bayesian Experimental Design for Systems Biology.
Perceptual analysis, visualization and organization of color
data
Perceptual analysis, visualization and organization of spectral
color data in R
Perceptual Analysis, Visualization and Organization of Spectral
Color Data in R
Perceptual Analysis, Visualization and Organization of Spectral
Colour Data in R
Perceptual Analysis, Visualization and Organization of Spectral
Colour Data
Penalized Adaptive Weighted Least Squares Regression
Amazon Web Services Software Development Kit
'Amazon Web Services' Analytics Services
Amazon Web Services Application Integration APIs
Amazon Web Services Application Integration Services
'Amazon Web Services' Application Integration Services
Amazon Web Services Cost Management APIs
Amazon Web Services Cost Management Services
'Amazon Web Services' Cost Management Services
Amazon Web Services Customer Engagement APIs
Amazon Web Services Customer Engagement Services
'Amazon Web Services' Customer Engagement Services
'Amazon Web Services' Developer Tools Services
'Amazon Web Services' End User Computing Services
Amazon Web Services Machine Learning APIs
Amazon Web Services Machine Learning Services
'Amazon Web Services' Machine Learning Services
Amazon Web Services Management & Governance APIs
Amazon Web Services Management & Governance Services
'Amazon Web Services' Management & Governance Services
Amazon Web Services Networking & Content Delivery APIs
Amazon Web Services Networking & Content Delivery Services
'Amazon Web Services' Networking & Content Delivery Services
Amazon Web Services Security, Identity, & Compliance APIs
Amazon Web Services Security, Identity, & Compliance Services
'Amazon Web Services' Security, Identity, & Compliance Services
Adding Progress Bar to '*apply' Functions
Pedigree/Family-Based Genetic Association Tests Analysis and
Power
Position Balanced and Nearly Position Balanced Block Designs
Programming with Big Data -- Core pbd Classes and Methods
Programming with Big Data -- Base Wrappers for Distributed
Matrices
Programming with Big Data -- Demonstrations of pbd Packages
Programming with Big Data -- Demonstrations and Examples Using
'pbdR' Packages
Programming with Big Data -- Distributed Matrix Computation
Programming with Big Data -- Distributed Matrix Methods
Programming with Big Data -- Interface to MPI
Programming with Big Data -- Interface to Parallel Unidata
NetCDF4 Format Data Files
Programming with Big Data --- MPI Profiling Tools
Programming with Big Data -- MPI Profiling Tools
Programming with Big Data -- Remote Procedure Call
Programming with Big Data -- Scalable Linear Algebra Packages
Programming with Big Data -- Interface to ZeroMQ
Programming with Big Data -- Interface to 'ZeroMQ'
Access Data and Metadata from 'Microsoft' 'Power BI' Documents
Parametric bootstrap and Kenward Roger based methods for model
comparison
Parametric bootstrap and Kenward Roger based methods for mixed
model comparison
Parametric bootstrap and Kenward-Roger-based methods for mixed
model comparison
Parametric Bootstrap and Kenward-Roger-Based Methods for Mixed
Model Comparison
Parametric Bootstrap and Kenward Roger Based Methods for Mixed
Model Comparison
Parametric Bootstrap, Kenward-Roger and Satterthwaite Based
Methods for Test in Mixed Models
Tracking the Progress of Mc*pply with Progress Bar
Probabilities for Bivariate Normal Distribution
Stan Models for the Pairwise Comparison Factor Model
Stan Models for the Paired Comparison Factor Model
IRT models for polytomous and continuous item responses
IRT Models for Polytomous and Continuous Item Responses
Convenient Tool for Solving the Prize-Collecting Steiner Tree
Problem
Create 2D Principal Component Plots with Bootstrapping
Parallel Analysis for ordinal and numeric data using polychoric
and Pearson correlations with S3 classes.
Parallel Analysis for Ordinal and Numeric Data using Polychoric
and Pearson Correlations with S3 Classes
Principal Component Analysis for Outlier Detection
Fast Principal Component Analysis for Outlier Detection
Calibration of P-Values for Point Null Hypothesis Testing
Estimating the skeleton and equivalence class of a DAG
Estimation of CPDAG/PAG and causal inference
Estimation of CPDAG/PAG and causal inference using the IDA
algorithm
Methods for graphical models and causal inference
Methods for Graphical Models and Causal Inference
Randomized Singular Value Decomposition Algorithms with
'RcppEigen'
Dynamic Principal Components for Periodically Correlated
Functional Time Series
Proximity Catch Digraphs and Their Applications
Model Fitting to Progressively Censored Mixture Data
Principal Component of Explained Variance
Preconditioned Conjugate Algorithm for solving Ax=b
Preconditioned Conjugate Gradient Algorithm for solving Ax=b
Reconstruction of Causal Networks for Data with Random Genetic
Effects
Piecewise Constant Hazards Models for Censored and Truncated
Data
Piecewise Constant Hazard Models for Censored and Truncated Data
Bayesian Network Learning with the PCHC Algorithm
Bayesian Network Learning with the PCHC and Related Algorithms
Approximate Bayesian Computations for Phylogenetic Comparative
Methods
Methods for patient-centered network meta-analysis
Methods for Patient-Centered Network Meta-Analysis
Penalized Cox Proportional Hazard Model for Time-Dependent
Covariates
Analyzing Real-Time Quantitative PCR Data
A package implementing the coalescent approach to PCR simulation
developed by Weiss and von Haeseler (NAR, 1997).
Implementing the Coalescent Approach to PCR Simulation Developed
by Weiss and Von Haeseler (NAR, 1997)
Panel-Corrected Standard Error Estimation in R
Tools for Regression Using Pre-Computed Summary Statistics
Periodically Correlated and Periodically Integrated Time Series
threshold regression and unit root test in panel data
Panel Data Regression: Threshold Model and Unit Root Tests
Threshold Model and Unit Root Tests in Panel Data
Threshold Model and Unit Root Tests in Cross-section and Time
Series Data
Threshold Model and Unit Root Tests in Cross-Section and Time
Series Data
Positive-Definite Wavelet-Based Multivariate Spectral Analysis
An Analysis Toolbox for Hermitian Positive Definite Matrices
Cluster analysis via nonparametric density estimation
Cluster Analysis via Nonparametric Density Estimation
Fetch economic and financial time series data from public
sources
Fetch Economic and Financial Time Series Data from Public
Sources
Read Portable Document Format (PDF) Files
Extract Text and Data from PDF Documents
Text Extraction and Rendering of PDF Documents
Text Extraction, Rendering and Converting of PDF Documents
Phenotypic Index Measures for Oak Decline Severity
Proximal/Distal Modeling Framework for Pavlovian Conditioning
Phenomena
Proximal/distal modeling framework for Pavlovian conditioning
phenomena
Panel Dynamic OLS Estimation of Cointegrating Vectors
Moment Condition Based Estimation of Linear Dynamic Panel Data
Models
Functions for Generating Periodic Curves
Various Tools and Data for Quantitative Peace Science
Tools and Data for Quantitative Peace Science Research
Periodogram Peaks in Correlated Time Series
Peak Picking and Annotation of High Resolution Experiments
Peak Picking Methods Inspired by Biological Data
Monitor the Total and Peak RAM Used by an Expression or Function
Package for Periodic Autoregression Analysis
Maximum Likelihood Inference for the Pearson VII Distribution
with Shape Parameter 3/2
Prediction Error Curves for Survival Models
Prediction Error Curves for risk prediction models in survival
analysis
Prediction Error Curves for Risk Prediction Models in Survival
Analysis
Pedigree, Genetic Merit and Phenotype Simulation
Pedigree, Genetic Merit, Phenotype, and Genotype Simulation
Functions to facilitate power and sensitivity analyses for
genetic studies of natrual popualtions
Functions to facilitate power and sensitivity analyses for
genetic studies of natural populations
Functions to Facilitate Power and Sensitivity Analyses for
Genetic Studies of Natural Populations
Gene-Level Variant Association Tests for Pedigree Data
Versatile Functions for Working with Pedigrees
Mutation Models for Pedigree Likelihood Computations
Public Economic Data and Quantitative Analysis
Easy Installation of the 'ped suite' Packages for Pedigree
Analysis
Creating and Working with Pedigrees and Marker Data
Client-Side R API Wrapper for Peer Models Network Model
Repository
Population and Evolutionary Genetics Analysis System
Data About Historic Pell Grant Distribution in the US
Portable Emissions (and Other Mobile) Measurement System
Utilities
Fit the Regularized Gehan Estimator with Elastic Net and Sparse
Group Lasso Penalties
Flexible Pair-Copula Estimation in D-vines with Penalized
Splines
Flexible Pair-Copula Estimation in D-vines using Bivariate
Penalized Splines
Flexible Pair-Copula Estimation in D-Vines using Bivariate
Penalized Splines
Estimating regularized multistate models using L1 penalties.
Estimating Regularized Multi-state Models Using L1 Penalties
Variable Selection in PH Cure Model with Time-Varying Covariates
Flexible R-Vines Estimation Using Bivariate Penalized Splines
Penalized estimation in Generalized Linear Models
L1 (lasso) and L2 (ridge) penalized estimation in GLMs and in the Cox model
L1 (lasso) and L2 (ridge) penalized estimation in GLMs and in
the Cox model
L1 (lasso and fused lasso) and L2 (ridge) penalized estimation
in GLMs and in the Cox model
L1 (Lasso and Fused Lasso) and L2 (Ridge) Penalized Estimation
in GLMs and in the Cox Model
Penalized classification using Fisher's linear discriminant
Penalized Classification using Fisher's Linear Discriminant
Feature Selection SVM using penalty functions
Feature Selection SVM using Penalty Functions
Integrative Penalized Conditional Logistic Regression
Flexible Copula Density Estimation with Penalized Hierarchical
B-Splines
Estimating Non-Simplified Vine Copulas Using Penalized Splines
Density Estimation with a Penalized Mixture Approach
Single- And Multiple-Group Penalized Factor Analysis
Penalized Poisson Pseudo Maximum Likelihood Regression
Penalized Elastic Net S/MM-Estimator of Regression
Simulation of high-dimensional data and parallelized repeated
penalized regression
Simulation of High-Dimensional Data and Parallelized Repeated
Penalized Regression
Data Sets for Craig Starbuck's Book, "The Fundamentals of People
Analytics: With Applications in R"
Data Sets for Keith McNulty's Handbook of Regression Modeling in
People Analytics
Parallelised Estimation of Prediction Error
Piecewise Exponential Distribution with Random Time Grids
Evaluation of diversity in nucleotide libraries
Evaluation of Diversity in Nucleotide Libraries
Package for Periodic Time Series Analysis
Permutation Tests for Randomization Model
Implementing Double Bootstrap Linear Regression Confidence
Intervals Using the 'perc-cal' Method
Estimate Percentiles from an Ordered Categorical Variable
Reconstruct Perfect Phylogenies from DNA Sequence Data
Assessment of Regression Models Performance
An infra-structure for performance estimation of predictive
models
An Infra-Structure for Performance Estimation of Predictive
Models
Enterprise Streamlined 'Shiny' Application Framework
Permutation Tests for General Dependent Truncation
Permutational Group Sequential Test for Time-to-Event Data
Permutation-Based Gene Expression Pathway Analyses
Permutation Based Gene Expression Pathway Analysis
Permutation test to compare variability within and distance between two groups
Permutation test to compare variability within and distance
between two groups
A Permutation Based Test for Biomarker Discovery in Microbiome
Data
Permutation Tests for Regression, (Repeated Measures)
ANOVA/ANCOVA and Comparison of Signals
The Symmetric Group: Permutations of a Finite Set
Functions for generating restricted permutations of data
Functions for Generating Restricted Permutations of Data
Resampling-based prediction error estimation for regression
models
Resampling-Based Prediction Error Estimation for Regression
Models
Examples for Integrating Prediction Error Estimation into
Regression Models
Estimation and Validation Methods for Subgroup Identification
and Personalized Medicine
Two-Part Estimation of Treatment Rules for Semi-Continuous Data
Pictographic Representation of Treatment Effects
Permutation of Species During Turnover Events
Perturbation analysis for evaluating collinearity
Sequence Iteration and Set Comprehension
A Tidy API for Sequence Iteration and Set Comprehension
Automatic Estimation of Number of Principal Components in PCA
Analysis of single serving and composite pesticide residue
measurements
Interface to Download Data on Pests and Hosts from 'EPPO'
Building, Visualizing, Exporting and Replaying Petri Nets
Statistics and Text Mining for Oil and Gas Papers from OnePetro
Metadata
Reproducible Retrieval of Pew Research Center Datasets
Loading a JAGS Module for the Piecewise Exponential Distribution
Phylogenetics for the Environmental Sciences
Estimates False Discovery Proportion Under Arbitrary Covariance
Dependence
Penalized Independent Component Analysis for Univariate
Functional Data
Independent Component Analysis for Univariate Functional Data
Persistence Flamelets: Computation and Inferential Tools
Functions for Generating PostgreSQL Statements/Scripts
An ensemble method for variable selection by carrying out Darwinian evolution in parallel universes
Bayesian Additive Regression Trees Using Particle Gibbs Sampler
and Gibbs/Metropolis-Hastings Sampler
Generate Random Samples from the Polya-Gamma Distribution
Penalized Generalized Estimating Equations for Bivariate Mixed
Outcomes
Quality speedy graphics compilation with Sweave
Quality speedy graphics compilation and caching with Sweave
Spatial Analysis and Data Mining for Field Ecologists
Build Dependency Graphs using Projection
Computes Powell's Generalized Synthetic Control Estimator
Phase II Clinical Trial Design Using Bayesian Methods
Adaptive Designs for Two-Stage Phase II Studies
Stratified Adaptive Designs for Two-Stage Phase II Studies
Phase II Clinical Trial Design for Multinomial Endpoints
Randomized Phase II Oncology Trials with Bernoulli Outcomes
Sensitivity Analysis for p-Hacking in Meta-Analyses
Gene Set Pareto Heterogeneity Analysis of Time-Course Gene
Expression Data
Enhanced RTF Wrapper for Use with Existing Table Packages
Interface to the 'Pharmpy' 'Pharmacometrics' Library
Personalized Repeated Measurement Design for Phase I Clinical
Trials
Repeated Measurement Design for Phase I Clinical Trial
Phase Plane Analysis of One and Two Dimensional ODE Systems
Phase Plane Analysis of One and Two Dimensional Autonomous ODE
Systems
Phase Plane Analysis of One- And Two-Dimensional Autonomous ODE
Systems
PHATE - Potential of Heat-Diffusion for Affinity-Based
Transition Embedding
Permutation Testing in High-Dimensional Linear Models
Visualization for PheCode Mapping with ICD-9 and ICD-10-CM Codes
Insect Phenology Model Evaluation Based on Daily Temperatures
Estimate Phenological Metrics using Presence-Only Data
Auxiliary Functions for Phenological Data Analysis
Auxiliary functions for phenological data processing, modelling
and result handling
Auxiliary Functions for Phenological Data Processing, Modelling
and Result Handling
Pheno2Geno - Generating genetic markers and maps from molecular
phenotypes
High-Throughput Generation of Genetic Markers and Maps from
Molecular Phenotypes for Crosses Between Inbred Strains
Continuous Development Models for Incremental Time-Series
Analysis
Interacting with the PhenoCam Data and API
Facilitates 'PhenoCam' Data Access and Time Series
Post-Processing
Extract Remote Sensing Vegetation Phenology
The package phenology fits a parametric function that describes
phenology
Tools to manage a parametric function that describes phenology
Tools to Manage a Parametric Function that Describes Phenology
Tools to Manage a Parametric Function that Describes Phenology
and More
Projecting Satellite-Derived Phenology in Space
Process Digital Images of a Vegetation Cover
Similarity and Distance Quantification Between Probability
Functions
Download Data from the Philadelphia District Attorney's Office
Nonparametric goodness-of-fit methods based on phi-divergences
Proportional Hazards with Mixed Model (PHMM)
Proportional Hazards Mixed-effects Model (PHMM)
Proportional Hazards Mixed-Effects Model (PHMM)
R tools for phoneticians and phonologists
A collection of functions useful for phonetics work.
Tools for Phonetic and Acoustic Analyses
Convert Letters to Numbers and Back as on a Telephone Keypad
Spectral Transmittance and Spectral Reflectance Data
Read Spectral and Logged Data from Foreign Files
Spectral Data of Light Emission by Lamps
Plant 'Photobiology' Related Functions and Data
Plant Photobiology Related Functions and Data
Spectral Response Data for Light Sensors
Waveband Definitions for UV, VIS, and IR Radiation
Waveband Definitions for 'UV', 'VIS', and 'IR' Radiation
Tools for Plant Ecophysiology & Modeling
R interface to the phreeqc geochemical modeling program
R interface to Geochemical Modeling Software
R Interface to Geochemical Modeling Software
Panel Data Analysis with Heterogeneous Time Trends
p-hull: a generalization of convex hull, X-Y hull and bounding
rectangle
Web Application Framework for 'PhUSE' Scripts
Basic functions for phylogenetic analysis
Analysis of Outbreaks with Sequence Data
An extension of some of the classes in phylobase.  Tree objects
now support subnodes on branches
An Extension (for Package 'SigTree') of Some of the Classes in
Package 'phylobase'
Phylogenetic Tree Topological Properties Evaluator
Calculating Topological Properties of Phylogenies
Base package for phylogenetic structures and comparative data
Base Package for Phylogenetic Structures and Comparative Data
Interactive Phylogenetic Trees Using the 'Phylocanvas'
JavaScript Library
Integrating phylogenetics and climatic niche modelling
Integrating Phylogenetics and Climatic Niche Modeling
Phylogenetic Comparative Methods for Function-Valued and Other
High-Dimensional Traits
Phylogenetic Comparative Methods for High-Dimensional Traits
Modelling Competitive Exclusion and Limited Dispersal in a
Statistical Phylogeographic Framework
Estimating Statistical Errors of Phylogenetic Metrics
Biogeographic Regionalization and Spatial Conservation
The Probability of Transmission Given Phylogenetic Linkage
Graph-Based Permutation Tests for Microbiome Data
Exploring the Phylogenetic Signal in Continuous Traits
R packge for simulating biological sequence evolution
R package for simulating biological sequence evolution
Flexible Simulations of Biological Sequence Evolution
Automated Phylogenetic Sequence Cluster Identification from
'GenBank'
Implements the Phylogenetic Regression of Grafen (1989)
The Phylogenetic Regression of Grafen (1989)
Calculate Physiological Characteristics of Adults and Children
Calculate Physiological Characteristics of Adults, Children and
Infants
Calculate physiologic characteristics of awake and anesthetized
adults, children and infants
Phylogenetic Tools for comparative biology (and other things)
Phylogenetic Tools for Comparative Biology (and Other Things)
Estimating the proportion of true null hypotheses for FDR
Estimating the Proportion of True Null Hypotheses for FDR
Predictive Information Criteria for Model Selection
Tools for integrating phylogenies and ecology
R tools for integrating phylogenies and ecology
Pathwise Calibrated Sparse Shooting Algorithm
Pick Data Points from a Deck.gl Scatterplot
Potential Impact Fraction and Population Attributable Fraction
for Cross-Sectional Data
Managing Larger Data on a GitHub Repository
Prediction Intervals for Random-Effects Meta-Analysis
Fast and Stable Estimation of the Probability of Informed
Trading (PIN)
Sequence ("Fasta"), Annotation ("Gff") and Variants ("Vcf") for
17 Samples of "P. Infestans" and 1 "P. Mirabilis"
Sequence ('FASTA'), Annotation ('GFF') and Variants ('VCF') for
17 Samples of 'P. Infestans" and 1 'P. Mirabilis'
Identify, Ping, and Log Internet Provider Connection Data
convert S trees to HTML/perl for interactive tree traversal
pinktoe: convert S trees to HTML/perl for interactive tree traversal
Graphically traverse a tree via GUI widgets or web based system
Data About the Victims of the Pinochet Regime, 1973-1990
Access to Pinterest Ads via the 'Windsor.ai' API
Convert Chinese Characters into Pinyin, Sijiao, Wubi or Other
Codes
Dual-Agent Dose Escalation for Phase I Trials using the PIPE
Design
Permutation p-Value Estimation for Gene Set Tests
High-performance pipeline operator and Pipe function
High-performance pipeline operator and object
Flexible Binding for Complex Function Evaluation with the Base R
|> Pipe
Diagnostics, Reliability and Predictive Maintenance of Pipeline
Systems
Calculate Pi Ratings for Teams Competing in Sport Matches
Create a Bayesian Posterior from a Phylogeny
Small Example Response and Response Time Data from PISA 2015
Small Example Response and Response Time Data from PISA 2018
Tools for Collecting and Visualizing Major League Baseball
PITCHf/x Data
Tools for Collecting and Visualizing Major League Baseball
PITCHfx Data
Tools for Harnessing MLBAM Gameday data and Visualizing PITCHf/x
Tools for Harnessing MLBAM Gameday Data and Visualizing PITCHf/x
Tools for Harnessing 'MLBAM' 'Gameday' Data and Visualizing
'pitchfx'
Pivotal Methods for Bayesian Relabelling and k-Means Clustering
Tables so Beautifully Fine-Tuned You Will Believe It's Magic
A complete statistical analysis of MALDI-TOF Mass Spectrometry
Proteomics data
Create simple packages which do not upset R CMD check
Create Simple Packages Which Do Not Upset R CMD check
Create Simple Packages Which Do not Upset R Package Checks
Cache 'CRAN'-Like Metadata and R Packages
Copy Local R Packages to Another Environment
Statically Determine Function Dependencies Between Packages
Package Dependency Resolution and Downloads
Make Static HTML Documentation for a Package
Download and Manage Optional Package Data
A Consistent and Intuitive Platform to Explore the Dependencies
of Packages on the Comprehensive R Archive Network Like
Repositories
Simulate Package Installation and Attach
Check the Heaviness of Package Dependencies
Analyzing Dependency Heaviness of R Packages
Analyze Dependency Heaviness of R Packages
Get Network Representation of an R Package
pkgutils -- Utilities for creating R packages.
Least-Squares Estimator under k-Monotony Constraint for Discrete
Functions
Global Sensitivity Analysis in Pharmacokinetic Modeling
Global Sensitivity Analysis in Physiologically Based Kinetic
Modeling
Log Linear by Linear Asscociation models
Log Linear by Linear Association models and Rasch family models
by pseudolikelihood estimation
A Pairwise Likelihood Augmented Cox Estimator for Left-Truncated
Data
PLastic ACcumulation Estimate using R (PLACER)
Plot Raster Images Interactively on a Plain HTML Canvas
Simple and Accessible Data from all Known Planets
A Sample Size Calculator for Machine Learning Applications in
Healthcare
Modelling and Analysis of Leaf Gas Exchange Data
Partially Linear Additive Quantile Regression
Read, Tidy, and Display Data from Microtiter Plates
Data from a Test of the PlatoWork tDCS Headset
Representing and exploring data through sound
Penalized Log-Density Estimation Using Legendre Polynomials
Pseudo-Likelihood Estimation of Log-Multiplicative Association
Models
Interface to the 'Pleiades' 'Archeological' Database
Pleiotropy Test for Multiple Traits on a Genetic Marker
Population Life Course Exposure to Health Effects Modeling
A GUI to View, Design and Export Various Graphs of Data
Probabilistic latent feature analysis of two-way two-mode
frequency data
Probabilistic Feature Analysis of Two-Way Two-Mode Frequencies
IRT Separate Calibration Linking Methods
Additive partially linear models for differential gene
expression analysis
Polytomous logit-normit (graded logistic) model estimation
Polytomous Logit-Normit (Graded Logistic) Model Estimation
Plot scatter points for two groups of values
Plotting Multi-Dimensional Data - Using 'rgl'
Plotting multi-dimensional data - using rgl.
Ternary Plots for Trinomial Regression Models
Diagnostic and Plotting Functions to Supplement 'bartCause'
Plot Summary Statistics as Choropleth Maps of Danish
Administrative Areas
Custom Function to Plot Components from a Gaussian Mixture Model
Tools for Visualizing Gaussian Mixture Models
Plot HTML output with Google Maps API and your own data
Plot SP data as HTML map mushup over Google Maps
Plot SP data as HTML map mashup over Google Maps
Plot SP or SPT(STDIF,STFDF) data as HTML map mashup over Google
Maps
Plot spatial or spatio-temporal data over Google Maps
Plot Spatial or Spatio-Temporal Data Over Google Maps
Visualization of spatial and spatio-temporal objects in Google
Earth
Visualization of Spatial and Spatio-temporal Objects in Google
Earth
Visualization of Spatial and Spatio-Temporal Objects in Google
Earth
Plot Marginal Effects from Linear Models
Generate Useful ROC Curve Charts for Print and Interactive Use
Graphing nonlinear latent variable interactions in SEMM
Graphing Nonlinear Relations Among Latent Variables from
Structural Equation Mixture Models
Easily Visualize Data from 'ERDDAP' Servers via the 'rerddap'
Package
Various Functions to Facilitate Visualization of Data and
Analysis
New Plots Based on 'ggplot2' and Functions to Create Regular
Shapes
'ggplot2' Version of "I'm Feeling Lucky!"
Create Interactive Web Graphics via Plotly's JavaScript Graphing
Library
Create Interactive Web Graphics via 'plotly.js'
Render 'Plotly' Maps without an Internet Connection
Tidy Tools for Visualizing Mixture Models
Plot a model's response while varying the values of the
predictors.
Plot a Model's Response While Varying the Values of the
Predictors
Plot a Model's Residuals, Response, and Partial Dependence Plots
Plot principal component histograms around a scatter plot.
Plot Principal Component Histograms Around a Scatter Plot
Making Visual Exploratory Data Analysis Easier
Making Visual Exploratory Data Analysis with Nested Data Easier
Scale Graphics Devices Using Plot Dimensions
Spider Plots, ROC Curves, Pie Charts and More for Use in Other
Plots
Prediction Limits for Poisson Distribution
Partial Least Squares Regression (PLSR) and Principal Component Regression (PCR)
Partial Least Squares Regression (PLSR) and Principal Component
Regression (PCR)
Partial Least Squares and Principal Component regression
Partial Least Squares and Principal Component Regression
Partial least squares Regression for beta regression models
Partial Least Squares Regression for Beta Regression Models
Partial least squares Regression for Cox models and related
techniques
Partial Least Squares Regression for Cox Models and Related
Techniques
Partial least squares Regression for generalized linear models
Partial Least Squares Regression for Generalized Linear Models
Variable Selection in Partial Least Squares
Partial Least Squares (PLS) Data Analysis Methods
Degrees of Freedom and Confidence Intervals for Partial Least
Squares Regression
Degrees of Freedom for Partial Least Squares Regression
Degrees of Freedom and Statistical Inference for Partial Least
Squares Regression
Linear and Smooth Predictor Modelling with Penalisation and
Variable Selection
Partial Least Squares data analysis methods
Partial Least Squares Data Analysis Methods
Tools for Partial Least Squares Path Modeling
Tools for Partial Least Squares Path Modeling (PLS-PM)
Formula Based PLS Path Modeling Utilities
Sensitivity Indexes from Polynomial Chaos Expansions and PLS
Pleasure - Partial Least Squares Analysis with Permutation
Testing
Simulate Probabilistic Long-Term Effects in Models with Temporal
Dependence
Turn 'Plumber' APIs into 'Tableau' Extensions
Pluralize and 'Singularize' Any (English) Word
Tools for splitting, applying and combining data
Tools for splitting, applying and combining data.
Tools for Splitting, Applying and Combining Data
Interface to the 'PM4py' Process Mining Library
Parallel Model-Based Clustering using
Expectation-Gathering-Maximization Algorithm for Finite Mixture
Gaussian Model
Paired Mass Distance Analysis for GC/LC-MS Based Non-Targeted
Analysis
Paired Mass Distance Analysis for GC/LC-MS Based Non-Targeted
Analysis and Reactomics Analysis
'dplyr' Extension for Common Panel Data Maneuvers
Book Companion for Processing and Modelling Financial Data with
R
Minimal Working Examples for Particle Metropolis-Hastings
Interface to the Penn Machine Learning Benchmarks Data
Repository
Deconvolution Density Estimation using Penalized MLE
Transform input data from a PMML perspective
Transforms input data from a PMML perspective
Transforms Input Data from a PMML Perspective
Create and Maintain a Relational Database of Data from
PubMed/MEDLINE
Calculates the Minimum Sample Size Required for Developing a
Multivariable Prediction Model
Probit-Normal Marginalized Transition Random Effects Models
Polytomous variable Latent Class Analysis
Polytomous Variable Latent Class Analysis
Dose Finding in Drug Combination Phase I Trials Using PO-CRM
Dose-finding in drug combination Phase I trials using the
partial order continual reassessment method (PO-CRM).
Legacy Scottish Post Office Directories Cleaner
Common Functions for 'PHUSE' Open Data Repository
Bayesian Variable Selection for a Poisson-Logistic Model
Poisson lognormal and bivariate Poisson lognormal distribution
Poisson Lognormal and Bivariate Poisson Lognormal Distribution
Analyzing Pointer Years and Components of Resilience
Validation of Local and Remote Data Tables
Data Validation and Organization of Metadata for Local and
Remote Tables
Working Comfortably with Pointers and Shortcuts to R Objects
Input/Output Functionality for "PO" and "POT" Message
Translation Files
Confidence Intervals with Poisson Double Sampling
A Faster Implementation of the Poisson-Binomial Distribution
Factorization of Sparse Counts Matrices Through Poisson
Likelihood
Simulating Homogenous & Non-Homogenous Poisson Processes
Fit high dimensional mixtures of Poisson GLM's
Fit high dimensional mixtures of Poisson GLMs
Fit High Dimensional Mixtures of Poisson GLMs
Robust M-Estimators Based on Transformations for Poisson Model
Policy Learning via Doubly Robust Empirical Welfare Maximization
over Trees
Datasets and Functions Featured in Pollock and Edwards R
Companion to Essential of Political Analysis
Datasets and Functions Featured in Pollock and Edwards, An R
Companion to Essentials of Political Analysis, Second Edition
Datasets and Functions Featured in Pollock and Edwards, an R
Companion to Essentials of Political Analysis, Second Edition
Authentication and Administration for 'shiny' Apps
Authentication, User Administration, and Hosting for 'shiny'
Apps
Tools for Acquiring and Analyzing Political Data
Tools for Working with Aerobiological Data
Estimate Pollinator Body Size and Co-Varying Ecological Traits
Calculate Crosstab and Topline Tables of Weighted Survey Data
Infrastructure for Manipulation Polynomial Matrices
The Pharmacokinetics (PK) of Multi-Component Drugs Using a
Metabolomics Approach
Genotype Calling with Uncertainty from Sequencing Data in
Polyploids and Diploids
Simulate and test marker dosage for dominant markers in
autopolyploids
Simulate and Test Marker Dosage for Dominant Markers in
Autopolyploids
Bayesian mixture models for marker dosage in autopolyploids
Bayesian Mixture Models for Marker Dosage in Autopolyploids
Implementation of the Polya-Aeppli distribution
Implementation of the Polya-Aeppli Distribution
Sensitivity Indexes Calculated from Polynomial Chaos Expansions
Bayesian Population Genomics in Autopolyploids
Find the Pole of Inaccessibility (Visual Center) of a Polygon
Linkage Analysis in Outcrossing Polyploids
A collection of functions to implement a class for univariate
polynomial manipulations
A Collection of Functions to Implement a Class for Univariate
Polynomial Manipulations
Genome wide analysis of RNA Polymerase II-based ChIP Seq data.
Helper Functions for Orthogonal Polynomials
QTL Analysis in Autopolyploid Bi-Parental F1 Populations
Tools for Polyploid Microsatellite Analysis
Polytomous logistic regression for fixed and mixed effects
Bootstrapped Basis Regression with Oracle Model Selection
Graphical Check for Proportional Odds Assumption
Solver for Partially Observable Markov Decision Processes
(POMDP)
Infrastructure for Partially Observable Markov Decision
Processes (POMDP)
Interface to 'pomdp-solve' for Partially Observable Markov
Decision Processes
Predictive Power of Linear and Tree Modeling
Statistical inference for partially observed Markov processes
Statistical Inference for Partially Observed Markov Processes
Person-Oriented Method and Perturbation on the Model
Gene-Based Association Tests using the Actual Impurity Reduction
(AIR) Variable Importance
Computing F-Statistics from Pool-Seq Data
Computing f-Statistics and Building Admixture Graphs Based on
Allele Count or Pool-Seq Read Count Data
Methods for Pooling P-Values from (Dependent) Tests
A Poor Man's Base R Copy of 'dplyr' Verbs
A Poor Man's Dependency Free Recreation of 'dplyr'
A Flexible Syntax for Population Dynamic Modelling
Functions for Epidemiological Analysis using Population Data
For interval estimation of mean of selected populations
Classify Digital PCR Droplets by Fitting Fluorescence
Populations
Summary of Population Pharmacokinetic Analysis
popRange: A spatially and temporally explicit forward genetic
simulator
Reconstruct population counts, fertility, mortality and
migration rates of human populations of the recent past.
Reconstruct Human Populations of the Recent Past
Bayesian Model to Estimate Population Trends from Counts Series
Construction and analysis of matrix population models
Construction and Analysis of Matrix Population Models
Provides Tools For Demographic Modelling Using Projection
Matrices
Demographic Modelling Using Projection Matrices
Accompaniment to the Book Population Genetics with R: An
Introduction for Life Scientists
Accompaniment to Population Genetics with R: An Introduction for
Life Scientists
This is an R package that constructs and manipulates population
graphs.
Estimate Kinship and FST under Arbitrary Population Structure
Tools for Simplifying the Population and Querying of SQLite
Databases
Tools for simplifying the population and querying of SQLite
databases
an R package for genetic analysis of populations with mixed
reproduction
Genetic Analysis of Populations With Mixed Reproduction
Genetic Analysis of Populations with Mixed Reproduction
Self-Organizing Maps With Population Based Convergence Criterion
Routines for Constructing and Evaluating Self-Organizing Maps
Functions for Constructing and Evaluating Self-Organizing Maps
Tools for Building, Visualizing, and Evaluating Self-Organizing
Maps
A Very Efficient Implementation of Kohonen's Self-Organizing
Maps (SOMs) with Starburst Visualizations
An Efficient Implementation of Kohonen's Self-Organizing Maps
(SOMs) with Starburst Visualizations
Applied Techniques to Demographic and Time Series Analysis
Estimate Smooth and Linear Trends from Population Count Survey
Data
Ridge-Type Penalized Estimation of a Potpourri of Models
Get the Same, Personal, Free 'TCP' Port over and over
Create Useful Summaries of the Portal Data
Portmanteau Tests for ARMA, VARMA, ARCH, and FGN Models
Portmanteau Tests for Time Series Models
Portmanteau Tests for Univariate and Multivariate Time Series
Models
Portmanteau Tests for Univariate and Multivariate Time. Series
Models
Automated Backtesting of Portfolios over Multiple Datasets
Framework for simulating equity portfolio strategies
Vine Based (Un)Conditional Portfolio Risk Measure Estimation
A package to perform segmentation using constrained HMM
A package to estimate posterior probabilities in change-point
models using constrained HMM
A package to estimate posterior probabilities and perform model
selection in change-point models using constrained HMM.
Post Double Selection with Double Machine Learning
Data Processing after Running 'GGIR' for Accelerometer Data
Tools for Interacting with 'PostgreSQL' / 'PostGIS' Databases
United States Postal Service API Interface
Create Beautiful, Simple Personal Websites
Minimal and Uncluttered Package Documentation
Generate PDF Conference Posters Using R Markdown
Tools for Working with Posterior Distributions
Estimating the Incubation Period Distribution of Post-Infectious
Syndrome
Parses Web Pages using Postlight Mercury
Utilities for Processing Posterior Samples Stored in
'mcmc.lists'
Tools for Internationalization and Portability in R Packages
Markov Chain Monte Carlo for Potts Models
Phased or Unphased Linkage Disequilibrium
Perform Power Analysis for the Random Intercept Cross-Lagged
Panel Model
Full Pattern Summation of X-Ray Powder Diffraction Data
Fitting heavy tailed distributions: the poweRlaw package
Power Analysis for Cluster Randomized Trials
Power Analysis Tool for Joint Testing Hazards with Competing
Risks Data
Power and Sample Size Calculation for eQTL Analysis
Power and Sample Size Calculation for Bulk Tissue and
Single-Cell eQTL Analysis
Power Calculations for Interactions for GWAS
Power Calculations for GxE and GxG Interactions for GWAS
Efficient Simulation of HDX-MS Data and Tools for the
Statistical Analysis
Power/Sample size calculation for mediation analysis
Power/Sample size calculation for mediation analysis, simple
linear regression, logistic regression, or longitudinal study
Power/Sample Size Calculation for Mediation Analysis
Power and sample size calculation for survival analysis of
epidemiological studies
Power and Sample Size Calculation for Survival Analysis of
Epidemiological Studies
An Interface to the 'Power BI REST APIs'
Extensions of 'dplyr' and 'fuzzyjoin' Join Functions
Power Calculations for Longitudinal Multilevel Models
Power Analysis for Longitudinal Multilevel Models
Sample Size Analysis for Psychological Networks and More
Power analyses for the affected sib pair and the TDT design
Power Analyses for the Affected Sib Pair and the TDT Design
Spatial Analysis of Pakistan Population Census
Probability Plot Correlation Coefficient Test
Probabilistic and Possibilistic Cluster Analysis
Interfacing with ProPublica's 'Congress' API
Partial and Semi-partial (Part) correlation
Partial and Semi-Partial (Part) Correlation
Diagnosis and Visualizations Tools for Temporal Point Processes
Generalised Additive Point Process Models
Projection Pursuit Based on Gaussian Mixtures and Evolutionary
Algorithms
Predict protein-protein interactions based on functional and
topological similarities.
Predict Protein-Protein Interactions Based on Functional and
Topological Similarities
Lookup Tables to Generate Poverty Likelihoods and Rates using
the Poverty Probability Index (PPI)
Privacy-Protecting Hazard Ratio Estimation in Distributed Data
Networks
A Collection of Models that Employ a Prior Distribution on
Partitions
A Collection of Models that Employ a Product Parition Prior
Distribution on Partitions
A Collection of Models that Employ a Product Partition
Distribution as a Prior on Partitions
Read Census Privacy Protected Microdata Files
PPM-LASSO: Point process models with LASSO penalties
Point Process Models with LASSO Penalties
Point Process Models with LASSO-Type Penalties
Design Clinical Trials using Sequential Predictive Probability
Monitoring
web tool for estimating under-five deaths caused by poor-quality
antimalarials in sub-Saharan Africa
Penalized Quantile Regression with Fixed Effects
Estimation of Prevalence Ratios using Logistic Models
Test for clustering of presence-absence data
Functions for clustering of presence-absence and abundance data
Functions for clustering of presence-absence, abundance and
multilocus genetic data
Functions for Clustering of Presence-Absence, Abundance and
Multilocus Genetic Data
Functions for Clustering and Testing of Presence-Absence,
Abundance and Multilocus Genetic Data
Provides a pragma / directive / keyword syntax for R.
Prais-Winsten Estimation Procedure for AR(1) Serial Correlation
Prais-Winsten Estimator for AR(1) Serial Correlation
Kvantitatiivsete meetodite praktikumi asjad / Functions used in
the course "Quantitative methods in behavioural sciences"
(SHPH.00.004), University of Tartu
Collection of Information-Based Feature Selection Filters
Tools for Information-Based Feature Selection and Scoring
Tools for Information-Based Feature Selection
Testing Workbench for Precision-Recall Curves
Diagnostics to Assess the Effects of Text Preprocessing
Decisions
Safety Diagnostics for Dose-Escalation Trial Designs
Precipitation Intensity, Concentration and Anomaly Analysis
Suite of Functions to Help Get Plot Elements Exactly Where You
Want Them
Estimate Sample Size Based on Precision Rather than Power
Calculate Accurate Precision-Recall and ROC Curves
Calculate Accurate Precision-Recall and ROC (Receiver Operator
Characteristics) Curves
Calculate Accurate Precision-Recall and Receiver Operator
Characteristics Curves
Estimates Reliability of Individual Supervised Learning
Predictions
Tools for Detecting Predatory Publishers and Journals
Classification rule based on Bayesian naive Bayes models with
feature selection bias corrected
Classification rule based on Bayesian naive Bayes models with feature selection bias corrected
Discrimination Mitigation for Machine Learning Models
Predictive Inference on Totals and Averages of Finite
Populations Segmented in Planned and Unplanned Domains.
Genomic Prediction of Hybrid Performance
Draw Three Dimensional Predict Plot Using Package 'rgl'
Prediction Interval Functions for Assessing Replication Study
Results
Calculate Predicted Means for Linear Models
Predicted Means for Linear and Semi Parametric Models
Predict the Race of a Given Surname Using Census Data
Predict the Race and Gender of a Given Name Using Census and
Social Security Administration Data
Assessing Performance of Prediction Models for Predicting
Patient-Level Treatment Benefit
Classification rule based on Bayesian mixture models with
feature selection bias corrected
R Package for Pairwise Preference Elicitation
2-Stage Clinical Trial Design and Analysis
2-Stage Preference Trial Design and Analysis
Utilities to fit paired comparison models for preferences
Utilities to Fit Paired Comparison Models for Preferences
Names Given to Babies in Quebec Between 1980 and 2020
Preparing Experimental Data for Statistical Analysis
Lightweight Data Quality Simulation for Classification
Tools for Visualization of Interdependent Data Quality Issues
Utilities for Preparation of Data Analysis
R Markdown Template to Preregister Scientific Studies
R Markdown Templates to Preregister Scientific Studies
Specify (Pre)Registrations and Export Them Human- And
Machine-Readably
R Interface for PreSens Fiber Optic Data
Registry of Victims of State Terrorism in Argentina
Predicting the Number of Species in a Random Sample
Data sets for package PRESS--Protein REsidue-level Structural
Statistics
'RStudio' Addins to Prettify 'HTML', 'CSS', 'JavaScript', and
More
'RStudio' Addins to Prettify 'JavaScript', 'C++', 'Python', and
More
Creating Pretty Documents from R Markdown
Pretty Summaries of Generalized Linear Model Coefficients
Scale Bar, North Arrow, and Pretty Margins in R
Pretty, Human Readable Formatting of Quantities
Estimating regional trends of a prevalence from a DHS
Estimating Regional Trends of a Prevalence from a DHS
Estimating Regional Trends of a Prevalence from a DHS and
Similar Surveys
Prevalence to Incidence Calculations for Point-Prevalence
Studies in a Nosocomial Setting
Data Pre-Processing for Bacterial Genome-Wide Association
Studies
Regular Expressions for Prices and Currencies
Van Westendorp Price Sensitivity Meter Analysis
Multiplexed Primer Design by Linear Set Coverage Approximation
Tools and Methods for Primatological Data Science
Projected Refinement for Imputation of Missing Entries in PCA
Use Prime Factorization for Computations
Functions and data for the forthcoming, A Primer of Ecology with
R
Functions and data for A Primer of Ecology with R
Functions and Data for the Book, A Primer of Ecology with R
Functions and Data for the Book, a Primer of Ecology with R
Visually Assessing the Specificity and Informativeness of Primer
Pairs
Fits a Principal Curve in Arbitrary Dimension
Fit a Principal Curve in Arbitrary Dimension
Finding and plotting nearly-null space bases
Finding and plotting simple basis vectors for multivariate data
Automatically Print R Objects to Appropriate Formats According
to the 'knitr' Output Format
Prioritize Diseases Candidate Genes with the Network and on
Functional Information
Candidate Gene Prioritization for Non-Communicable Diseases
Based on Functional Information
Systematic Conservation Prioritization in R
Analyzing Multiple Omics Data with an Offset Approach
Access Data from the Oregon State Prism Climate Project
Creates a Prisma Diagram using 'DiagrammeR'
Downloads and Parses World Prison Brief Data
Point-Process Response Model for Optogenetics
'ProPublica' U.S. Congress Bills API Wrapper
Elementary Probability on Finite Sample Spaces
Tools for Post-Processing Class Probability Estimates
Statistical Tools for Probing Moderation Effects
Multivariate Generalized Kernel Smoothing and Related
Statistical Methods
Unsupervised Multivariate Outlier Probabilities for Large
Datasets
probsvm: Class probability estimation for Support Vector
Machines
Extraction of Bands from MODIS Calibrated Radiances MOD02 NRT
Several Methods for Procedural Name Generation
Rule-Based Conformance Checking of Business Process Event Data
Product Limit Estimation for event history and survival analysis
Product-limit estimation. Kaplan-Meier and Aalen-Johansson
method for censored event history (survival) analysis
Product-limit estimation for censored event history analysis
Product-Limit Estimation for Censored Event History Analysis
Indices of Productivity Using Data Envelopment Analysis (DEA)
An Alternative Display Profiling Data as Tree Structure
Compute and Visualize Profile Extrema Functions
Implements profile analysis described in Davison & Davenport
(2002)
Profile R Code and Visualize with 'Pprof'
Read, Manipulate, and Write Profiler Data
Tools for profiling inference functions for various model classes
Tools for profiling inference functions for various model
classes
Profiling Inference Functions for Various Model Classes
Profile Analysis of Multivariate Data in R
Probabilistic Forecast Combination Using CRPS Learning
An alternative display for profiling information
An Alternative Display for Profiling Information
Interactive Visualizations for Profiling R Code
Finding the Optimal Cluster Number Using Progeny Clustering
Prognostic ROC curves for evaluating the predictive capacity of
a binary test
An Inclusive, Unifying API for Progress Updates
A Inclusive, Unifying API for Progress Updates
A simple interface to the PROJ.4 cartographic projections
library
A simple interface to the PROJ.4 cartographic projections library
Project Dense Vectors Representation of Texts on a 2D Plan
A Project Infrastructure for Researchers
Task Tracking and Project Management with GitHub
A User-Friendly Interface for Accessing the Prolific API
Patient-Reported Outcome Data Analysis with Stan
Abstractions for Promise-Based Asynchronous Programming
Proteomics Data Analysis and Modeling Tools
Analysis & Measurement of Promotion Effectiveness
Add Tooltips in 'Shiny' Apps with 'Hint.css'
Prometheus 'PromQL' Query Client for 'R'
Analyzing Combination of Proportions and Relative Risk
Feature (gene) selection based on the Proportional Overlapping
Scores
Parse Java Properties Files for R Service Bus Applications
Parse 'Java' Properties Files for 'R Service Bus' Applications
Inference on Single Binomial Proportion and Bayesian
Computations
Calculating Proportionality Between Vectors of Compositional
Data
Tests of the Proportional Hazards Assumption
Miscellaneous functions for processing and sample selection of
vis-NIR diffuse reflectance data
Miscellaneous Functions for Processing and Sample Selection of
Spectroscopic Data
Visualizing and Analyzing Mass Spectrometry Related Data in
Proteomics
Search Tagged Peptides & Draw Highlighted Mass Spectra
Perform Analysis and Create Visualizations of Proteins
Optimization of a multi-stage proteomic study
Statistical Analysis of High Throughput Proteomics Data
Multiform Seq2Seq Model for Time-Feature Analysis
Protein (identification and) quantification based on peptide
evidence
Fast and Simple Object Serialization to Protocol Buffers
Highly Optimized Protocol Buffer Serializers
Interactive Dendrograms for Visualizing Hierarchical Clusters
with Prototypes
Inference on Prototypes from Clusters of Features
Protein Sequence Feature Extraction with R
Protein Sequence Descriptor Calculation and Similarity
Computation with R
Generating Various Numerical Representation Schemes of Protein
Sequence
Generating Various Numerical Representation Schemes for Protein
Sequences
Bottom-Up Proteomics and LiP-MS Quality Control and Data
Analysis Tools
Marcel Proust's Text from 'A La Recherche Du Temps Perdu'
Tools for Natural Language Processing in French
Compare Provenance Collections to Explain Changed Script Outputs
Creates Adjacency Matrices for Lineage Searches
Summarizes Provenance Related to Inputs and Outputs of a Script
or Console Commands
Uses Provenance to Trace File Lineage for One or more R Scripts
Statistical Toolbox for Sedimentary Provenance Analysis
Alpha and Beta Proximity to Irreplaceability
Computes Proximity in Large Sparse Matrices
Minimal Protein Set Explaining Peptide Spectrum Matches
Minimal Protein Set Explaining Peptide Precursors
Tabular Data Backed by Partitioned 'fst' Files
List, Query, Manipulate System Processes
A package to download regularly maintained political science
data sets and make commonly used, but infrequently updated
variables based on this data.
Download Regularly Maintained Political Science Data Sets
Flexible Identification of Phenotype-Specific Subpathways
Penalized semi-parametric Bayesian Cox (PSBC) models with
shrinkage and grouping priors
Penalized Semiparametric Bayesian Cox Models with Shrinkage and
Grouping Priors
Penalized Parametric and Semiparametric Bayesian Survival Models
with Shrinkage and Grouping Priors
Bayesian Dynamic Borrowing with Propensity Score
R in the Political Science Computational Laboratory, Stanford University
Political Science Computational Laboratory, Stanford University
Standardizing Physiological Composite Risk Endpoints
Adaptive, sine-multitaper power spectral density estimation
Adaptive, Sine-Multitaper Power Spectral Density Estimation
Adaptive, Sine-Multitaper Power Spectral Density and Cross
Spectrum Estimation
Use Time Series to Generate and Compare Power Spectral Density
Parameter space exploration with Latin Hypercubes
Parameter Space Exploration with Latin Hypercubes
Methods for Evaluating Principal Surrogates of Treatment
Response
Prediction Model Selection and Performance Evaluation in
Multiple Imputed Datasets
Prediction Model Pooling, Selection and Performance Evaluation
Across Multiply Imputed Datasets
Projected Spatial Gaussian Process (psgp) methods
Projected Spatial Gaussian Process methods for package intamap
Projected Spatial Gaussian Process Methods
Decision Tree Analysis for Probabilistic Subgroup Identification
with Multiple Treatments
Build panel data sets from PSID raw data
Build Panel Data Sets from PSID Raw Data
Performance Spectrum Miner for Event Data
Parameter Space Partitioning MCMC for Global Model Evaluation
Spatial and Spatio-Temporal Semiparametric Regression Models
with Spatial Lags
Estimation of Non-Linear Outcomes of Infectious Disease
Outbreaks using Generalized Additive Modeling with Penalized
Basis Splines
Estimation of Characteristics of Seasonal and Sporadic
Infectious Disease Outbreaks Using Generalized Additive
Modeling with Penalized Basis Splines
Functions for Analyzing Performance Science Data
PS-Integrated Methods for Incorporating RWE in Clinical Studies
Piecewise Exponential Model for Time to Progression and Time
from Progression to Death
Flexible and Efficient Evaluation of Principal
Surrogates/Treatment Effect Modifiers
Specification Tests for Parametric Propensity Score Models
Various Procedures Used in Psychometrics
Integrated Toolkit for Psychological Analysis and Modeling in R
Procedures for Personality and Psychological Research
Procedures for Personality, Psychometric, and Psychological Research
Procedures for Psychological, Psychometric, and Personality Research
Procedures for Psychological, Psychometric, and Personality
Research
Psychometric Networks for Intensive Longitudinal Data
Tools to Accompany the 'psych' Package for Psychological
Research
Open Datasets from Meta-Analyses in Psychology Research
Efficient and Publishing-Oriented Workflow for Psychological
Science
Structural Equation Modeling and Confirmatory Network Analysis
Recursive Partitioning Based on Psychometric Models
Psychrometric Properties of Moist and Dry Air
Text Mining Methods for Psychological Research
Real Time Monitoring of Asset Markets: Bubbles and Crisis
Helper Tools for Teaching Statistical Data Analysis
Functions for analyzing psychophysical data in R
Functions for Analyzing Psychophysical Data in R
Produce well-formatted tables for psychological research
Produce Well-Formatted Tables for Psychological Research
Decentralized Unequivocality in Psychological Science
Computational models for prospect theory and other theories of
risky decision making
Persistence Terrace for Topological Data Analysis
Analyses of Protein Post-Translational Modifications
Poisson-Tweedie Generalized Linear Mixed Model
Construct Polygons Summarising the Location and Variability of
Point Sets
Helper Functions for Use with "ProjectTemplate"
Stemming Algorithms for the Portuguese Language
Tail Index Estimation for Power Law Distributions
Access the 'Public Transport Victoria' Timetable API
Bayesian Variable Selection with Hierarchical Priors
Fetch Sections of XML Scholarly Articles
A Toolbox for Public Health and Epidemiology
Bayesian Meta-Analysis with Publications Bias and P-Hacking
Gathering Metadata About Publications, Grants, Clinical Trials
from 'PubMed' Database
Printing Results of Statistical Computing in a Publishable Way
Create and Query a Local 'PubTator' Database
Parallel Utilities for Lambda Selection along a Regularization
Path
Identification of Transcriptional Dynamics using Pulse Models
via 4su-Seq Data and RNA-Seq Data
Parallel Ultra-Rapid p-Value Computation for Linear Regression
Interaction Terms
Meta-Analysis Methods Correcting for Publication Bias
Inbreeding-Purging Estimation in Pedigreed Populations
Simple Method for Purging Mediation Effects among Independent
Variables
Tools at the Intersection of 'purrr' and 'dplyr'
Send Push Notifications using 'Pushover'
Assembling Data Sets for Non-Linear Mixed Effects Modeling
Likelihood Ratio Test-Based Approaches to Pharmacovigilance
Creates and Plots P-Value Functions, S-Value Functions,
Confidence Distributions and Confidence Densities
the Calculation and Application of p-variation
Calculation and Application of p-variation
Calculation and Application of p-Variation
Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling
Hierarchical Clustering with P-Values via Multiscale Bootstrap
Resampling
Simplifies the Analysis of Pressure Volume and Leaf Drying
Curves
An R package to interact with the Project Vote Smart API for
scientific research
PWIGLS for Two-Level Multivariate and Multilevel Linear Models
Power and Sample Size Analysis for One-way and Two-way ANOVA
Models
Power Analyses for Common Designs (Power to the People)
Statistical Power Simulation for Testing the Rasch Model
Penn World Table (Versions 5.6, 6.x, 7.x)
Pena-Yohai Initial Estimator for Robust S-Regression
Lint 'Python' Files with a R Command or a 'RStudio' Addin
Control Charts, Capability and Distribution Identification
Quantitative Classification by Association Rules
Methods for Quantitative Magnetic Resonance Imaging ('qMRI')
Methods for Quantitative Magnetic Resonance Imaging (qMRI)
Variables Selection for Clustering and Classification
Functions to Facilitate Exploratory Data Analysis
Heuristics for the Quadratic Assignment Problem (QAP)
Quantile Regression for Binary Longitudinal Data
Estimate Power and Required Sample Size in QCA
Quality Control Charts under Repetitive Sampling
Robust Estimation of Gaussian Mixture Models
Bridging the gap between qualitative data and quantitative
analysis
Bridging the Gap Between Qualitative Data and Quantitative
Analysis
Dictionaries and word lists for the qdap package.
Dictionaries and Word Lists for the 'qdap' Package
Regular Expression Removal, Extraction, & Replacement Tools
Regular Expression Removal, Extraction, and Replacement Tools
Fitting a Quadrilateral Dissimilarity Model to Same-Different
Judgments
Tools for modelling the growth dynamics of arrays of large
numbers of colonies and performing quantitative fitness
analysis (QFA).
Quantitative Fatty Acid Signature Analysis in R
Smooth Additive Quantile Regression Models
Quantile G-Computation Extensions for Effect Measure
Modification
Statistical Tools for Quantitative Genetic Analyses
Use a network approach to visualize empirical data
Network representations of relationships in data
Graph Plotting Methods, Psychometric Data Visualization and
Graphical Model Estimation
A 'shiny' Application for Active Learning Instruction in
Introductory Quantitative Genetics
Tools for Quantitative Genetics Data Analyses
Generalized Quantitative Genetics Data Analyses
Q-Kernel-Based and Conditionally Negative Definite Kernel-Based
Machine Learning Tools
Processing Data for Quantitative Language Comparison (QLC)
Utility sparse matrix functions for Quantitative Language
Comparison
Utility Sparse Matrix Functions for Quantitative Language
Comparison
Visualization for Quantitative Language Comparison (QLC)
Managing and Building of Quarterly Life Tables
Quantile-mapping for post-processing climate model output
Statistical transformations for post-processing climate model
output
Statistical Transformations for Post-Processing Climate Model
Output
Analysis of subjective perspectives using Q methodology
Analysis of Subjective Perspectives Using Q Methodology
Transport Data and Commands Across the 'FAME' / 'R' Border
q-order partial correlation graph search algorithm
Noncompartmental Pharmacokinetic Analysis by qPharmetra
Modelling and analysis of real-time PCR data
Modelling and Analysis of Real-Time PCR Data
Interface to the 'qpmad' Quadratic Programming Solver
Creates Simultaneous Testing Bands for QQ-Plots
Generation and Support of QQIDs - A Human-Compatible
Representation of 128-bit Numbers
Quantile-Quantile Plot Extensions for 'ggplot2'
Quantile-quantile analysis of 24-hr precipitation using a frame
work based on the exponential distribution
Quantile Quantile Plots Self Calibrating For Visual Testing
Self Calibrating Quantile-Quantile Plots for Visual Testing
Quantile Regression for Linear Mixed-Effects Models
Quantile Regression for Nonlinear Mixed-Effects Models
Quantal Response Analysis for Dose-Mortality Data
Tools that Create D3 JavaScript Force Directed Graph from R
True Random Numbers using the ANU Quantum Random Numbers Server
Nonlinear and Penalized Quantile Regression Coefficients
Modeling
Quick Response Code (QR Code) / Matrix Barcode Creator
Simulation of Q and R mode factor analysis
Simultaneous simulation of Q and R mode factor analyses
Simultaneous simulation of Q and R mode factor analyses with
Spatial data
Quantile Regression Model for Residual Lifetime Using an Induced
Smoothing Approach
Joint Estimation in Linear Quantile Regression
Data Sets for Quantitative Risk Management Practice
SVM Quantile Regression with the Pinball Loss
Running Commands Remotely on 'Gridengine' Clusters
Quantitative Trait Locus Mapping in Experimental Crosses
Database Storage of Genotype Probabilities for QTL Mapping
Testing Pleiotropy in Multiparental Populations
Densitometric Analysis of Thin-Layer Chromatography Plates
Interactive Graphics for QTL Experiments
Tools for mapping multiple complex traits
Tools for Mapping Multiple Complex Traits
Random-Effect Multiple QTL Mapping in Autopolyploids
Exact permutation moments of quadratic form statistics
Cleanup and Visualization of Quadrat Data
Functions to solve Quadratic Programming Problems.
Functions to Solve Quadratic Programming Problems
Quadratic Programming with Absolute Value Constraints
Visualizing the SD using a Quadratic Curve
Sparsity by Worst-Case Quadratic Penalties
Causal Inference with Qualitative and Ordinal Information on
Outcomes
Unified Framework for Data Quality Control
Opinionated Approach for Digitizing Semi-Structured Qualitative
GIS Data
Automatic Generation of Qualitative Color Palettes
Download Qualtrics Survey Data Directly into R
Implements Indices of Qualitative Variation Proposed by Wilcox
(1973)
Uncertainties of Climate Projections using Smoothing Splines
Streamline Descriptive Analysis of Quantitative Data Matrices
Quantitative chemical analysis: calibration and evaluation of results
Quantitative chemical analysis: calibration and evaluation of
results
Dimension Reduction Techniques for Conditional Quantiles
Scaling Models and Classifiers for Textual Data
Plots for the Quantitative Analysis of Textual Data
Textual Statistics for the Quantitative Analysis of Textual Data
Quantification of Qualitative Survey Data
Quantile Kriging for Stochastic Simulations with Replication
Algorithms for Quantile- And Mean-Optimal Treatment Regimes
Growth Charts via Smooth Regression Quantiles with Automatic
Smoothness Estimation and Additive Terms
Quantile Regression Forests for 'ranger'
Quantile-based Spectral Analysis of Time Series
Quantile-Based Spectral Analysis of Time Series
Simple Methods for Calculating Value at Risk and Expected
Shortfall
Simple Methods for Calculating and Backtesting Value at Risk and
Expected Shortfall
Interaction Prediction Between Groundwater and Quarry Extension
Using Discrete Choice Models and Artificial Neural Networks
R Interface to 'Quarto' Markdown Publishing System
Arithmetics and linear algebra with Quaternions
Translate 'SQL' Queries into 'R' Expressions
Functions to make surveys processing easier.
Functions to Make Surveys Processing Easier
Analysis of Queueing Networks and Models.
Analysis of Queueing Networks and Models
Calculation of Homology of Quandles, Racks, Biquandles and
Biracks
A System of Plotting Optimized for Speed and Modularity
Build Regression Models Quickly and Display the Results Using
'ggplot2'
An 'R' Client for the 'USDA NASS Quick Stats API'
Fits Psychometric Functions for Multiple Groups
Bayesian Mixed Models for Qualitative Individual Differences
QUick IDentification of DIagnostic CHaracters
Summary charts of micro satellite profiles for a set of
biological samples
Quantile Regression Outlier Diagnostics with K Left Out Analysis
Get 'Quora' Ads Data via the 'Windsor.ai' API
A Way of Writing Functions that Quote their Arguments
Q-value estimation for false discovery rate control
Quasi-variances for factor effects in statistical models
Quasi variances for factor effects in statistical models
Quasi Variances for Factor Effects in Statistical Models
Bayesian Network Learning Improved Project
Perform JIVE Decompositions for Multi-Source Data
Perform JIVE Decomposition for Multi-Source Data
Bivariate (Two-Dimensional) Confidence Region and Frequency
Distribution
A Mini-Dictionary for 'R' and 'Markdown' Writing
Tools to Calculate Climate Targets for Financial Portfolios
Tools to Measure Climate Scenario Alignment of Corporate Lending
Portfolios
Measure Climate Scenario Alignment of Corporate Loans
Datasets to Align Financial Markets with Climate Goals
Datasets to Measure the Alignment of Corporate Loan Books with
Climate Goals
Tools to Match Financial Portfolios with Climate Data
Tools to Match Corporate Lending Portfolios with Climate Data
Visualize the Climate Scenario Alignment of a Financial
Portfolio
Computes R Squared for Mixed (Multilevel) Models
R-Squared Measures for Multilevel Models
In-Text Resizing for Images and Data Tables in 'Markdown' and
'Quarto' Documents
In-Text Resizing for Containers, Images and Data Tables in
'Shiny', 'Markdown' and 'Quarto' Documents
Easily Create Presentation-Ready Rich Text Format (RTF) Table
and Figure
Easily Create Production-Ready Rich Text Format (RTF) Table and
Figure
r2stl, R package for visualizing data using a 3D printer
Wrapper for 'SUNDIALS' Solving ODE and Sensitivity Problem
Symbols for 'Markdown' and 'Shiny' Application
Simulating Forest Growth using the 3-PG Model
Create Interactive 3D Visualizations of Molecular Data
'WebGL'-Based 3D Plotting using the 'three.js' Library
Statistical Inference on Lineup Fairness
Work with the Bay Area Transportation Commission Application
Programming Interface
Statistical Analysis and Cut-Point Determination of Immunoassays
R wrapper of ARPACK for large scale eigenvalue/vector problems,
on both dense and sparse matrices
Retrieves altmerics data for any published paper from
altmetrics.com
Retrieves Altmerics Data For Any Published Paper From
Altmetric.com
Retrieves Altmerics Data for Any Published Paper from
'Altmetric.com'
Interface to the JavaScript Library 'amCharts 4'
Parameter estimation for the Averaging model of Information
Integration Theory
Parameter estimation for the averaging model of Information
Integration Theory
Parameter Estimation for the Averaging Model of Information
Integration Theory
Interface to the bird-watching datasets at proyectoavis.com
Interface to the Bird-Watching Dataset Proyecto AVIS
Interface to the birdwatching datasets at proyectoavis.com
Implementation of BDAT Tree Taper Fortran Functions
Assortative Mating Simulation and Multivariate Bernoulli
Variates
The Beta Random Number and Dirichlet Random Vector Generating
Functions
Correct Bias in DNA Methylation Analyses
Detect Copy Number Variants from SNPs Data
This package builds maps with a full cartographic layout.
R tools for integrating with the www.clinicalcodes.org
repository
Interactive Networks, Timelines, Barplots, Galleries with
'D3.js'
Robust Data Envelopment Analysis (DEA) for R
R Bindings for the Discourse Network Analyzer
Generating Various Numerical Representation Schemes of DNA
Sequences
The rDVR package allows you to start stop and save a video
server from within R.
Functions to Interact with the 'FAIR Data Pipeline'
Descent-Based Calibrated Optimal Direct Estimation
Low-Level Interface to the '.NET' Virtual Machine Along the
Lines of the R C/Call API
Subset Searching Algorithm Using DPP Greedy MAP
Applications of Empirical Dynamic Modeling from Time Series
Manipulating and Analysing Electronic Health Record Data
Extensible Markov Model (EMM) for Data Stream Clustering in R
Extensible Markov Model for Modelling Temporal Relationships
Between Clusters
Get Seismic Data from the International Federation of Digital
Seismograph Networks
Space-Time Estimation of Forest Variables using the FIA Database
Estimation of Forest Variables using the FIA Database
Feasible Solution Algorithm for Finding Best Subsets and
Interactions
NASA's Global Ecosystem Dynamics Investigation (GEDI) Data
Visualization and Processing
Analysis of Continuous Glucose Monitor Data
Gamma convolutions for methylation array background correction.
2021 Ghana Population and Housing Census Results as Data Frames
Retrieve data sets from the HealthData.gov data API
Passes an Array of IP Addresses to Iphub.info and Returns a
Dataframe with Details of IP
Detects Fraud in Online Surveys by Tracing and Scoring IP
Addresses
Detects Fraud in Online Surveys by Tracing, Scoring, and
Visualizing IP Addresses
Retrieves altmetrics from ImpactStory. See
http://impactstory.org for more about the metrics.
R-Interface to Gene Drop Simulation from JPSGCS
R-interface to Gene Drop Simulation from JPSGCS
Minicircle Sequence Cluster (MSC) Analyses
Historical Data for Kenya Foreign Exchange Prices
Access Data from the 'Kolada' Database in R
Package for the analysis of lake physics
Package for the Analysis of Lake Physics
Synchrony in Motion Energy Analysis (MEA) Time-Series
Multiple Imputation using Denoising Autoencoders
Multiple Imputation with Denoising Autoencoders
Estimates Pareto-Optimal Solution for Hiring with 3 Objectives
Importing Data from Loligo Systems Software, Calculating
Metabolic Rates, and Critical Tensions
Importing Data from Loligo Systems Software, Calculating
Metabolic Rates and Critical Tensions
Memory-Efficient, Visualize-Enhanced, Parallel-Accelerated GWAS
Tool
A Robust Missing Imputation Method for Gene Expression Data
Automate Mouse Clicks and Send Keyboard Input
An interface to the NOAA Operational Model Archive and
Distribution System
An Interface to the NOAA Operational Model Archive and
Distribution System
An R Interface to the NOAA Operational Model Archive and
Distribution System
Testing Neighbor Effects in Marker-Based Regressions
Interval Mapping for Quantitative Trait Loci Underlying Neighbor
Effects
Ordinary Differential Equation (ODE) Solvers Written in R Using
S4 Classes
Placido Analysis of Corneal Irregularity
Automatic Detection of Experimental Unit in Precision
Agriculture
Inference and Prediction of Generic Physiologically-Based
Kinetic Models
Download and Merge Single-Cell RNA-Seq Data from the PanglaoDB
Database
R interface to the iPlant Discovery Environment
Sample Size Computations Controlling the Type-II Generalized
Family-Wise Error Rate
Preferences and Skyline Computation in R
Database preferences and Skyline computation
Database Preferences and Skyline Computation
Real-Time Adaptive Penalization for Streaming Lasso Models
Functions to Create and Evaluate Search and Rescue Plans
An R Package for Stepwise Cluster Analysis
Simulated Haploid Asexual Population Evolution
Spatially-Explicit Power Analysis for Conservation and Ecology
Statistical Package for Analysis Related Cleaning Support
Sites, Polulation, and Records Cleaning Skills
Sites, Population, and Records Cleaning Skills
Rational Approximations of Fractional Stochastic Partial
Differential Equations
Statistical Downscaling Toolkit for Climate Change Scenario
using Non Parametric Quantile Mapping
R interface to SymPy computer algebra system
R Interface to SymPy Computer Algebra System
Interface to 'Symbiota' Portals for Accessing Multi-Organismal
Biodiversity Data
Repertoire Analysis of the Detected Clonotype
Methods to Analyse Seasonal Radial Tree Growth Data
Tools to Process Point Clouds Derived from Terrestrial Laser
Scanning
Time-of-flight mass spectra signal processing
Advanced and Parallel Random Number Generation via 'TRNG'
Tools for tensor analysis and decomposition
Tools for Tensor Analysis and Decomposition
R Templates from the University of Miami
Data and Functions for USA State and County Unemployment Data
A package for accessing World Bank climate data
The William and Mary Bayesian Analysis Tool
Download, Edit and Transform Wind Data from GFS
Download, Edit and Include Wind Data in Ecological and
Evolutionary Analysis
Download, Edit and Include Wind and Sea Currents Data in
Ecological and Evolutionary Analysis
Access to the YouTheria mammal trait database
Access to the YouTheria Mammal Trait Database
Reference Analysis for Bayesian Meta-Analysis
Generate Codes to Uniquely and Robustly Identify Individuals for
Animal Behavior Studies
Racing methods for the selection of the best
Pattern-Based Zoneless Method for Analysis and Visualization of
Racial Topography
Rapid A/Ci Response (RACiR) Data Analysis
Loading Data from 'ActiveCampaign API v3'
Basics Menu for Radiant: Business Analytics using R and Shiny
Data Menu for Radiant: Business Analytics using R and Shiny
Design Menu for Radiant: Business Analytics using R and Shiny
Model Menu for Radiant: Business Analytics using R and Shiny
Multivariate Menu for Radiant: Business Analytics using R and
Shiny
Inverse-Regression Estimation of Radioactive Doses
Replicability Adjusted p-Values for Two Independent Studies with
Multiple Endpoints
Query Random User Data from the Random User Generator API
Utilities for Smooth Navigation of Medical Image Data
Utilities for Convenient Extraction of Medical Image Metadata
Convenience Functions for Routine Data Exploration
Ridge Estimation of Precision Matrices from High-Dimensional
Data
Ridge Estimation of the Vector Auto-Regressive (VAR) Processes
Ridge Estimation of Vector Auto-Regressive (VAR) Processes
Pricing Equity Derivatives with Extensions of Black-Scholes
Rail Trail Data for Trails in the United States from the
Rails-to-Trails
Data for Trails in the United States from the Rails-to-Trails
Conservancy
Rainbow plots, functional bagplot, functional HDR boxplot
Rainbow plots, bagplots and boxplots for functional data
Rainbow Plots, Bagplots and Boxplots for Functional Data
Bagplots, Boxplots and Rainbow Plots for Functional Data
Obtain and Analyze Rainfall data from the Climate Prediction
Center (CPC)
Obtain and Analyze Rainfall Data from the Climate Prediction
Center
Obtain and Analyze Daily Rainfall Data from the USA Climate
Prediction Center (CPC)
The Reinert Method for Textual Data Clustering
Stochastic Precipitation Downscaling with the RainFARM Method
Rainfall Frequency (Design Storm) Estimates from the US National
Weather Service
Efficient Wrapper for the 'Airtable' API
Normalize sample weights using marginal total population weights.
Normalize sample weights using marginal total population
weights.
Easy Spatial Microsimulation (Raking) in R
Estimation and Inference in Random Attention Models
Revealed Preference and Attention Analysis in Random Limited
Attention Models
An Interface to the AMIDST Toolbox for Data Stream Processing
Download and Read RAM Legacy Stock Assessment Database
Bayesian Geostatistical Modeling with RAMPS
Reinforced Angle-Based Multicategory Support Vector Machines
Covariate Balance Checks: Randomization Tests and Graphical
Diagnostics
Package Provides Access to Fake User Data
Random number generator based on AES cipher
Generate a Random p x p Correlation Matrix
Random Network Model Selection and Parameter Tuning
Random Network Model Estimation, Selection and Parameter Tuning
A Parallel Analysis With Polychoric Correlation Matrices
A Parallel Analysis with Polychoric Correlation Matrices
Breiman's random forest for classification and regression
Breiman and Cutler's random forests for classification and regression
Breiman and Cutler's random forests for classification and
regression
Breiman and Cutler's Random Forests for Classification and
Regression
Distributed 'randomForest' for Big Data using 'ddR' API
Explaining and Visualizing Random Forests in Terms of Variable
Importance
Random Forests for Survival, Regression, and Classification
(RF-SRC)
Random Forests for Survival, Regression and Classification
(RF-SRC)
Fast Unified Random Forests for Survival, Regression, and
Classification (RF-SRC)
Random name generating function and data set
Function for Generating Random Names and a Dataset
Ishwaran and Kogalur's Random Survival Forest
Random Uniform Forests for Classification and Regression
Random Uniform Forests for Classification, Regression and
Unsupervised Learning
Function to create a random list for crossover studies
Function to Create a Random List for Crossover Studies
Create a Random List for Crossover Studies
Easy-to-Use Tools for Common Forms of Random Assignment and
Sampling
Easy to Use Tools for Common Forms of Random Assignment
Easy to Use Tools for Common Forms of Random Assignment and
Sampling
Get Random Quotes from Quotes on Design API
toolbox for pseudo and quasi random number generation.
toolbox for pseudo and quasi random number generation and RNG tests.
toolbox for pseudo and quasi random number generation and RNG
tests.
Toolbox for Pseudo and Quasi Random Number Generation and RNG
Tests.
Toolbox for Pseudo and Quasi Random Number Generation and RNG
Tests
Toolbox for Pseudo and Quasi Random Number Generation and Random
Generator Tests
Occurrence Filtering and Generation of Species Range Polygons
Occurrence Filtering, Geographic and Taxonomic Standardization
and Generation of Species Range Polygons
Occurrence Filtering, Geographic Standardization and Generation
of Species Range Polygons
A package to manipulate species range (extent-of-occurrence)
maps
A package for easy generation of biodiversity (species richness)
or life-history traits maps using species geographical ranges
A platform for the study of macroecology of life history traits
A Platform for the Study of Macroecology of Life History Traits
A Platform for the Study of Macro-Ecology of Life History Traits
Provides Templates for Metadata Files Associated with Species
Range Models
Simple Tools for Defining Species Ranges
Mid-Domain Effect and Species Richness Estimates
Mid-Domain Effect and Species Richness Patterns
Rank-Based Tests for General Factorial Designs
Rank Intraclass Correlation for Clustered Data
Methods for Working with Uncertainty in Rankings
Convenient Plotting for the Modified Rankin Scale and Other
Ordinal Outcome Data
Statistical Tools for Preference Learning with Rankings and
Ratings
Rank regression for censored data AFT model.
Generation of Random Vectors with User-Defined Density
Base Functions and Resources for Rapporteket
Generates 'RapiDoc' Documentation from an 'OpenAPI'
Specification
Rapid Automatic Keyword Extraction (RAKE) Algorithm
Application Directories: Determine Where to Save Data, Caches,
and Logs
Application directories: determine where to save data, caches
and logs.
Miscellaneous (stats) helper functions with sane defaults for
reporting
Miscellaneous (Stats) Helper Functions with Sane Defaults for
Reporting
Representative and Adequate Prioritization Toolkit in R
Linear Model with Tree-Based Lasso Regularization for Rare
Features
Testing Gene-Environment Interaction for Rare Genetic Variants
Ecological and biogeographical null model tests for comparing
rarefaction curves
Ecological and Biogeographical Null Model Tests for Comparing
Rarefaction Curves
Regularized Autoregressive Hidden Semi Markov Model
Range Ancestral State Estimation for Phylogeography and
Comparative Analyses
Geographic analysis and modeling with raster data
raster: Geographic data analysis and modeling
Kernel Based Estimates on in-Memory Raster Images
A Raster Where Cells are Generic Objects
Visualization methods for the raster package.
Visualization methods for the raster package
Access Forest Ecology Layers for British Columbia in 2001-2018
Diversity Indices for Numerical Matrices
Easily and Rapidly Generate Raster Image Data with Support for
'Plotly.js'
Create a Spatial Raster from Plain Images
Processing Acoustic Startle Experimental Data
Bayesian Estimation of the Evolutionary Rate Matrix
Fit Statistical Models of Repeated Categorical Rating Data
Statistical Models of Repeated Categorical Rating Data
An index of inter rater agreement among a set of raters
An index of inter-rater agreement among a set of raters
A Modification of Fleiss' Kappa in Case of Nominal and Ordinal
Variables
A Modification of Fleiss' Kappa in case of Nominal and Ordinal
Variables
Confidence Intervals for Comparisons of Binomial or Poisson
Rates
Ratios Between Two Data Sets and Correction for Adhering
Particles on Plants
Calculating Ratios Between Two Data Sets and Correction for
Adhering Particles on Plants
Graphical user interface for data mining in R
Graphical User Interface for Data Mining in R
Graphical User Interface for Data Science in R
Access Data and Statistics from the ABS and RBA Websites
Dashboard System for Reproducible Visualization of 'iEEG'
An R Interface for Raven DataFrames (Beta0)
Signal Processing Toolbox for Analyzing 'Electrophysiology' Data
Memory efficient handling of FASTA sequence files, a pure R
implementation.
Easily Get True-Positive Rate and False-Positive Rate and KS
Statistic
Retrieve Raw R Code from Popular Tutorials and Websites
Parse and Render Molecular Structures in 3D
Create and Visualize Hillshaded Maps from Elevation Matrices
Create Maps and Visualize Data in 2D and 3D
Download and Parse Public Data Released by B3 Exchange
'Bielefeld' Academic Search Engine ('BASE') Client
Age-Depth Modelling using Bayesian Statistics
Reading, manipulation and writing BAM (Binary alignment) files.
An R package for reading and writing BAM (Binary alignment)
files.
An R Package for Reading and Writing BAM (Binary Alignment)
Files
Read and Write BAM (Binary Alignment) Files
Bayesian Trees for Conditional Mean and Variance
R Interface to Brazilian Central Bank Web Services
Extraction and Analysis of Data from the Bitcoin Cash (BCH)
Blockchain
Analysis and Manipulation of Data from Minecraft Bedrock Edition
Tools for 'Box Geometry Model' (BGM) Files and Topology for the
Atlantis Ecosystem Model
R interface to the Biodiversity Heritage Library.
Interface to the 'Biodiversity' 'Heritage' Library
Read 'Bibtex' Files and Convert Between Bibliography Formats
Inference and Prediction of ToxicoKinetic (TK) Models
User-Friendly R Interface to Biologic Web Services' API
Read/Write, Transform, and Summarize 'BIOM' Data
Functions to interact with BioUML server
Functions to Interact with BioUML Server
Handling Linear Gaussian Bayesian Networks
Perform Rosenbaum bounds sensitivity tests for matched data.
Perform Rosenbaum bounds sensitivity tests for matched and
unmatched data.
Perform Rosenbaum Bounds Sensitivity Tests for Matched and
Unmatched Data
Alternative Bootstrap-Based t-Test Aiming to Reduce Type-I Error
for Non-Negative, Zero-Inflated Data
Rbundler manages an application's dependencies systematically
and repeatedly.
Residual Balancing Weights for Marginal Structural Models
Robust and Conditional Data Envelopment Analysis (DEA)
Regionalization of Multiscale Spatial Processes
Different Numeric Optimizations to Estimate Parameter
Coefficients
Access and Plot CanVec and CanVec+ Data for Rapid Basemap
Creation in Canada
Calibration and Analysis of Radiocarbon Dates
Large, sparse optimal matching with refined covariate balance
Large, Sparse Optimal Matching with Refined Covariate Balance
Estimate Rogers-Castro Migration Age Schedules with Bayesian
Models
Optimal Subset Matching with Refined Covariate Balance
Parametric Bootstrapping to Control Rank Conditional Coverage
Miscellaneous R Functions for Swedish Regional Cancer Centers
Safely Manage API Keys and Load Data from a REDCap or Other
Source
Data on Base Packages for Current and Previous Versions of R
Chess Move, Generation/Validation, Piece Placement/ Movement,
and Check/Checkmate/Stalemate Detection
Reverse correlation image classification toolbox
Plot Jacobson-Truax Reliable Change Indices
Fetch Climate Data from Environment Canada
Download Aggregate Trial Information and Results from
ClinicalTrials.gov
Run 'R CMD check' from 'R' and Capture Results
Functions and Datasets for rcompanion.org
Functions to Support Extension Education Program Evaluation
Create a Package or Research Compendium Structure
Manage R Configuration at the Command Line
Wraps the API for the Brazilian Chamber of Deputies
R interface to the CONIFERS forest growth model
A Collection of Small Text Corpuses of Interesting Data
A Collection of Small Text Corpora of Interesting Data
Cosmic Microwave Background Data Analysis
Securely Use Credentials Within R Scripts
An Implementation of Crime Analysis Methods
Visualization of Restricted Cubic Splines
Predict Fish Year-Class Strength from Survey Data
Simulations and Visualizations of Rubik's Cube (with Mods)
Robust Cure Models for Survival Analysis
Shrunken Centroids Regularized Discriminant Analysis
Hierarchical Partitioning for Canonical Analysis
Hierarchical and Variation Partitioning for Canonical Analysis
Without Limits for the Number of Predictors (Matrices)
Hierarchical and Variation Partitioning for Canonical Analysis
Run an R Daemon Process in the Background
R Client for the Daisi Microservice Platform
'DataCite' Client for 'OAI-PMH' Methods and their Search 'API'
'DataCite' Client for 'OAI-PMH' Methods and their Search API
Companion Datasets and Functions for Blair, Coppock, and
Humphreys (2022) "Research Design: Declare, Diagnose, Redesign"
Manipulation Testing Based on Density Discontinuity
Toolbox for Regression Discontinuity Design ('RDD')
Decision Analytic Modelling in Health Economics
Interact with the UK AIR Pollution Database from DEFRA
Relevant Dimension Estimation (RDE) in Feature Spaces
Tools to Manipulate and Query Semantic Data
An Implementation of the 'DoubleClick for Publishers' API
API Client and Dataset Management for the Demographic and Health
Survey (DHS) Data
Measurement and Partitioning of Similarity-Sensitive
Biodiversity
Local Randomization Methods for RD Designs
Analysis of RD Designs with Multiple Cutoffs or Scores
R Interface to the Deutsche Nationalbibliothek (German National
Library) API
R Interface to the 'Deutsche Nationalbibliothek (German National
Library) API'
Get the Category of Content Hosted by a Domain
Create Doxygen Documentation for Source Code
Client for the Digital Public Library of America ('DPLA')
Robust data-driven statistical inference in
Regression-Discontinuity designs
Robust Data-Driven Statistical Inference in
Regression-Discontinuity Designs
Programmatic Interface to the Dropbox API
Programmatic Interface to the 'Dropbox' API
Select and Download Climate Data from 'DWD' (German Weather
Service)
Improved Foreign Function Interface (FFI) and Dynamic Bindings
to C Libraries (e.g. OpenGL)
R Interface to Google RE2 (C++) Regular Expression Library
Detecting Mislabeled Samples in Genetic Data
Interactive Data Tables Based on 'React Table'
Simplify Formatting of Tables Made with 'Reactable'
Easily Customize Interactive Tables Made with Reactable
Streamlined Table Styling and Formatting for Reactable
Read Data Stored in DBC (Compressed DBF) Files
Parse 'Actigraph' 'GT3X'/'GT3X+' 'Accelerometer' Data
Parse 'ActiGraph' 'GT3X'/'GT3X+' 'Accelerometer' Data
Reads files generated by MALDI-TOF MS of Bruker Daltonics' *flex
series
Reads mass spectrometry data in Bruker *flex format
Reads acqu and fid files generated by mass spectrometer of
Bruker Daltonics' *flex series
Reads Mass Spectrometry Data in Bruker *flex Format
Read and Manipulate GenAlEx-format Genotype Files
Read, Write, Manipulate and Convert GenAlEx-Format Genotype
Files
Weather Data Download from WWW.METEOGALICIA.COM
Reading machine learning benchmark data sets from different
sources in their original format.
Reading Machine Learning Benchmark Data Sets in Different
Formats
Reads mass spectrometry data in mzXML format.
Reads mass spectrometry data in mzXML format
Reads Mass Spectrometry Data in mzXML Format
Read ODS files and puts them into data frames
Read 'Excel' Files from the Australian Bureau of Statistics into
Tidy Data Sets
Download and Tidy Time Series Data from the Australian Bureau of
Statistics
Read bitmap images (BMP,JPEG,PNG) without external dependencies
Simple Unified Interface to Read Bitmap Images (BMP,JPEG,PNG)
Simple Unified Interface to Read Bitmap Images
(BMP,JPEG,PNG,TIFF)
A suite of functions to flexibly read data from files
Suite of Functions to Flexibly Read Data from Files
Utilities for Importing and Manipulating Biomedical Data Files
Fast Reader for 'Wavefront' OBJ 3D Scene Files
Download and Tidy Data from the Reserve Bank of Australia
Simply Read ASCII Single and Multicard Polling Datasets
Translate Models from System Dynamics Software into 'R'
Read and Write Sparse Matrices in 'SVMLight' and 'LibSVM'
Formats
Import and Handling for Plain and Formatted Text Files
Enhanced Reading and Writing for 'SQLite' Databases
Real Time Disease Surveillance Using Geospatial Statistical
Modelling
A Wrapper for the API of the Danish Housing Market Statistics
When Expectations Meet Reality: Realistic Unit Testing
Clean Water Quality Data for NPDES Reasonable Potential Analyses
R Client for the eBird Database of Bird Observations
Finite Mixture Modeling, Clustering & Classification
Rough - Enhanced - Bayesian Finite Mixture Modeling
Build Regular Expressions in a Human Readable Way
Core Functionality for the 'rebus' Package
Date and Time Extensions for the 'rebus' Package
Numeric Extensions for the 'rebus' Package
Unicode Extensions for the 'rebus' Package
Access U.S. Federal Government Recall Data
Simulation of Rare Events Case-Control Studies.
Text Analysis Through the 'Receptiviti' API
3D Reconstruction of Archaeological Excavations
Preprocessing Tools to Create Design Matrices
Preprocessing and Feature Engineering Steps for Modeling
Solving biasing produced by tied values in cluster analysis.
Ordination methods for the analysis of beta-diversity indices.
Ordination Methods for the Analysis of Beta-Diversity Indices
Compute the Rectangular Statistical Cartogram
Interface Functions for PMML Creation, and Data Recoding
Interactive Annotation of Text and Images
'Recom' REmoves COMments of Rscript File for you
Evaluation Metrics for Implicit-Feedback Recommender Systems
Lab for Testing and Developing Recommender Algorithms for Binary
Data
Lab for Developing and Testing Recommender Algorithms
Book-Crossing Dataset (BX) for recommenderlab
Book-Crossing Dataset (BX) for 'recommenderlab'
Reconstruct Individual-Level Data from Published KM Plots
Toolkit to Validate New Data for a Predictive Model
Recommender System using Matrix Factorization
Creates Pseudo-Observations and Analysis for Recurrent Event
Data
Computes Revisitation Metrics for Trajectory Data
Reconstruction of Daily Data - Precipitation
Get Reddit Ads Data via the 'Windsor.ai' API
Markov Chain Monte Carlo Methods for Redistricting Simulation
Simulation Methods for Legislative Redistricting
Tools for the IUCN Red List of Ecosystems and Species
Generates 'Redoc' Documentation from an 'OpenAPI' Specification
Objective Bayes Intrinsic Conditional Autoregressive Model for
Areal Data
Managing data from reference genomes (UCSC, ensembl)
Managing data from reference genomes (UCSC, Ensembl)
Managing data from Ensembl and UCSC genome browsers.
Gene And Splice Site Annotation Using Annotation Data From
Ensembl And UCSC Genome Browsers
Gene and Splice Site Annotation Using Annotation Data from
Ensembl and UCSC Genome Browsers
Gene and Splice Site Annotation Using Annotation Data from
'Ensembl' and 'UCSC' Genome Browsers
API Wrapper for the UK REF 2014 Impact Case Studies Database
Reference Interval Estimation using Real-World Data
Cluster and Merge Similar Values Within a Character Vector
Refining Data Table Using a Set of Formulas
Work with Refreshable Datasets that Update their Data
Automatically
Locate Trans and Intersex-Friendly Toilets
Interactive Plotting for Functional Data Analyses
Wavelet-Domain Regression with Functional Data
Random Subspace Method (RSM) for linear regression.
Random Subspace Method (RSM) for Linear Regression
Tools for an Introductory Class in Regression and Modeling
Wrappers Around 'base::grep()' for Use with Pipes
Regular Expressions in 'shiny' Select Lists
A 'Shiny' App to Test Regular Expressions in an R Environment
Elimination of Noisy Samples in Regression Datasets using Noise
Filters
Helper Functions for Regression Analysis
Convert Region Names and Division Codes of China Over Years
Curve Registration for Exponential Family Functional Data
Regression-Based Causal Mediation Analysis with an Interaction
Term
Regression-Based Causal Mediation Analysis with Interaction and
Effect Modification Terms
Network-Based Regularization for Generalized Linear Models
Automatic Time Series Forecasting and Missing Value Imputation
Easy Linear, Quadratic and Cubic Regression Models
Fitting Gaussian Linear Models where the Covariance Structure is a Linear Combination of Known Matrices by Maximising the Residual Log Likelihood
Gaussian linear models with linear covariance structure
Gaussian Linear Models with Linear Covariance Structure
Toolkit for Compiling, (Post-Hoc) Testing, and Plotting
Regression Results
Performs Regularization on Structural Equation Models
Non-Parametric Bayesian Spectrum Estimation for Multirate Data
Detect and Test Regular Sequences and Subsequences
Convenience Functions for Implicit Regression Weights
Searching for footprints of selection using Haplotype
Homozygosity based tests
Searching for Footprints of Selection using Haplotype
Homozygosity Based Tests
Searching for Footprints of Selection using "Extended Haplotype
Homozygosity" Based Tests
Searching for Footprints of Selection using 'Extended Haplotype
Homozygosity' Based Tests
Data Only: Searching for Footprints of Selection using Haplotype
Homozygosity Based Tests
Downloads Tweets from a List of Tweet IDs
Reinforced Risk Prediction with Budget Constraint
Relationship Inference Based on Mixtures
Item Analysis Package with Standard Errors
Relabel Loadings from MCMC Output for Confirmatory Factor
Analysis
Relative importance of regressors in linear models
Relative Importance of Regressors in Linear Models
Functions for Mapping Key-Value Pairs, Many-to-Many,
One-to-Many, and Many-to-One Relations
Data Structures and Algorithms for Relations
relax -- R Editor for Literate Analysis and lateX
Relaxation of glmnet models (as in relaxed lasso, Meinshausen
2007)
Package for some probability distributions.
Reliability Diagrams Using Isotonic Regression
Relative Contribution of Effects in a Regression Model
The Truncated Elliptical Family of Distributions
Regularized Multivariate Regression for Identifying Master Predictors
Regularized Multivariate Regression for Identifying Master
Predictors
Random Effects Meta-Analysis for Correlated Test Statistics
Regional Spatial Modeling with Continuous Borders
Match Regular Expressions with a Nicer 'API'
Tidy Output from Regular Expression Matching
'RStudio' Addins to Simplify 'Markdown' Writing
Insert and Extract "Reminders" from Function Comments
Reference-Based Multiple Imputation for Ordinal/Binary Response
Remote R: Control a Remote R Session from a Local One
R Package Installation from Remote Repositories, Including
'GitHub'
Refining Evaluation Methodology on Stage System
Renewable Power Systems and the Environment
Replicability Analysis for Multiple Studies of High Dimension
Tools for Handling EpiJSON (Epidemiology Data) Files
Average Bioequivalence with Expanding Limits (ABEL)
Two-Way ANOVA-Like Method to Analyze Replicated Point Patterns
A set of demonstrations of debunking of flawed analytical
set-ups
Fluid Use of 'dplyr' and Parametric Arguments
Reliable Plying of Remote or Big Data with R
Patches to Use 'dplyr' on Remote Data Sources
A collection of miscellaneous tools for reproducible research
with R.
Miscellaneous Tools for Reproducible Research
Miscellaneous Tools for Reproducible Research with R.
Create Report Table from Different Objects
R Interface to the 'NIH RePORTER Project' API
Repeated measures proportional odds logistic regression
Repeated Measures Proportional Odds Logistic Regression
Automated Reporting of Results and Statistical Models
An Easy Way to Report Regression Analysis
Tools for automatically generating reproducible clinical report
Lightweight Infrastructure for Handling Multiple R Markdown
Documents
A general message and error reporting system
A General Message and Error Reporting System
An R package to assist in the workflow of writing academic
articles and other reports
Assist the Workflow of Writing Academic Articles and Other
Reports
Generate LaTeX tables of descriptive statistics
Generate Latex - tables of descriptive statistics
Generate LaTeX Tables of Descriptive Statistics
Generate "LaTeX"" Tables of Descriptive Statistics
Renewable Energy Probability Resource Assessment Tool (REPRA)
Determine the representativity of two multidimensional data sets
Create Representative Records After Entity Resolution
Prepare Reproducible Example Code for Sharing
Prepare Reproducible Example Code via the Clipboard
Reproduce Statistical Analyses and Meta-Analyses
A Set of Tools that Enhance Reproducibility Beyond Package
Management
Coordinate System Transformations for Map Data
Coordinate System Transformations for Generic Map Data
Examples of Recursive Lists and Nested or Split Data Frames
Powerful Classes for HTTP Requests and Responses
Helper Package to Install Packages for R
Power and Sample Size Calculations for Completely Randomized and
Rerandomized Experiments
General Purpose Client for 'ERDDAP' Servers
Extracts Environmental Data from 'ERDDAP' Web Services
Data Sets for Mathematical Statistics with Resampling in R
Data Sets for "Mathematical Statistics with Resampling and R"
(3rd Ed)
Autoencoder-based Residual Deep Network with Keras Support
Bootstrap Imputation for Single-Cell RNA-Seq Data
Regression and similarity evaluation for memory-based learning
in spectral chemometrics.
Regression and Similarity Evaluation for Memory-Based Learning
in Spectral Chemometrics
Memory-Based Learning in Spectral Chemometrics
Tools for Analysis, Design, and Operation of Water Supply
Storages
Simulate Agricultural Production and Evolution of Pesticide
Resistance
Flexibly reshape data: a reboot of the reshape package.
Flexibly Reshape Data: A Reboot of the Reshape Package.
Flexibly Reshape Data: A Reboot of the Reshape Package
A GUI for the reshape2 and plyr packages.
Import, Process, Analyse, and Calculate Rates from Respirometry
Data
Tools for Conducting Respirometry Experiments
Tools for Conducting and Analyzing Respirometry Experiments
Screening for Careless Responding Patterns
Search and Retrieve Data from Eurostat Database
Create and Query a Local Copy of 'GenBank' in R
Functions for Working with the 'www.estimize.com' Web Services