assertthat, dynutils (>= 1.0.3), irlba, Matrix
graphics, grid, splines, MASS, nlme, minqa(>= 1.1.15)
graphics, grid, splines, MASS, nlme, minqa (>= 1.1.15)
graphics, grid, splines, MASS, nlme, minqa (>= 1.1.15), Rcpp
graphics, grid, splines, utils, parallel, MASS, nlme, lattice,
minqa (>= 1.1.15), nloptr (>= 1.0.4)
graphics, grid, splines, utils, parallel, MASS, lattice, nlme
(>= 3.1-123), minqa (>= 1.1.15), nloptr (>= 1.0.4)
graphics, grid, splines, utils, parallel, MASS, lattice, boot,
nlme (>= 3.1-123), minqa (>= 1.1.15), nloptr (>= 1.0.4)
graphics, grid, splines, utils, parallel, MASS, lattice, boot,
nlme (>= 3.1-123), minqa (>= 1.1.15), nloptr (>= 1.0.4),
statmod
graphics, grid, splines, parallel, MASS, nlme, lattice, minqa
(>= 1.1.15), RcppEigen (> 0.3.1.2.3)
graphics, grid, splines, parallel, MASS, nlme, lattice, minqa
(>= 1.1.15), RcppEigen (>= 0.3.2.0)
graphics, grid, splines, parallel, MASS, nlme, lattice, minqa
(>= 1.1.15), nloptr
graphics, grid, splines, utils, parallel, MASS, nlme, lattice,
minqa (>= 1.1.15), nloptr
qtl, lattice, pastecs, stringr, fdrtool, LDheatmap, genetics,
graphics, utils, grDevices, stats, lme4
qtl, lme4, lattice, pastecs, stringr, graphics, utils,
grDevices, stats
boot, plyr, dplyr, Matrix, nlmeU, RLRsim
boot, plyr, dplyr (>= 0.8.0), Matrix, nlmeU, RLRsim
catchr, dplyr (>= 0.8.0), Matrix, nlmeU, ggplot2, ggdist,
HLMdiag, purrr, forcats, stats, statmod, magrittr
dplyr (>= 0.8.0), Matrix, nlmeU, ggplot2, ggdist, HLMdiag,
purrr, forcats, stats, statmod, tidyr, magrittr
dplyr (>= 0.8.0), Matrix, nlmeU, ggplot2, ggdist, HLMdiag,
purrr, forcats, stats, statmod, tidyr, magrittr, tibble
stats4, grDevices, graphics, stats, magic, MASS, Matrix,
spatstat.geom
quadprog, mvtnorm, glmnet, lme4, utils, stats, glmmLasso
MASS, matrixcalc, mnormt, plyr, doParallel, bigmemory
stats, methods, nlme, lmeSplines, parallel, reshape, gdata,
graphics
stats, methods, nlme, lmeSplines, parallel, reshape, gdata,
gplots, ggplot2, graphics
stats, methods, nlme, lmeSplines, parallel, reshape2, gdata,
gplots, gridExtra
slider, stats, nnls, cli, utils, R6, generics, origami, future
(>= 1.17.0), progressr
stats, nnls, cli, utils, R6, generics, origami, future (>=
1.17.0), progressr, data.table, SuperLearner
stats, nnls, cli, R6, generics, origami, future (>= 1.17.0),
progressr, data.table, checkmate (>= 2.1.0), SuperLearner
stats, nnls, cli, R6, generics, origami, future (>= 1.17.0),
progressr, data.table (>= 1.13.0), checkmate (>= 2.1.0),
SuperLearner
shiny, shinyjs, lmtest, mgcv, methods, MASS, scatterplot3d,
rgl, car
mclust, foreach, MASS, stringr, gtools, pgmm, utils
MASS, grid, png, RgoogleMaps, RColorBrewer
methods, MASS, grid, png, RgoogleMaps, RColorBrewer, mgcv
methods, MASS, grid, png, RgoogleMaps, RColorBrewer, mgcv,
plyr
methods, MASS, grid, png, RgoogleMaps, sp, rgdal,
RColorBrewer, mgcv, plyr
methods, MASS, grid, png, RgoogleMaps, OpenStreetMap, sp,
rgdal, RColorBrewer, mgcv, plyr
dplyr (>= 1.0.0), dygraphs, ggplot2 (>= 3.0.0), lubridate,
rlang (>= 0.2.0), tidyr, tsibble (>= 0.9.0), xts, zoo
crayon, methods, prettyunits, rlang (>= 1.0.0)
Rcpp (>= 0.12.13), Rdpack, Matrix, RSpectra
Rcpp (>= 0.12.13), Rdpack, Matrix, RSpectra, bigsnpr
KernSmooth (>= 2.5.0), mgcv (>= 1.8-19), sampleSelection (>=
1.2-0), stats
glmnet, DALEX, ggplot2, partykit, ingredients
locpol, stats, expectreg, quantreg, matrixcalc, lestat
dplyr, tidyr, magrittr, rlang, ggplot2, metR, gridExtra,
rootSolve, viridis
splines, glm2, turboEM (>= 2021.1), Matrix, itertools2,
iterators
partykit, doParallel, data.table, foreach, iterators, parallel
partykit, doParallel, data.table, foreach, iterators,
parallel, stats
nloptr, parallel, stats, randtoolbox, MASS
generics, MASS, nloptr, parallel, randtoolbox, stats, tibble
stats, utils, graphics, grDevices, qvcalc
dplyr, magrittr, purrr, rlang, stats, tidyr, stringr, miniUI,
rstudioapi, shiny, sessioninfo, stringi, waiter, tibble
dplyr, magrittr, purrr, rlang, stats, tidyr, stringr, miniUI,
rstudioapi, shiny, sessioninfo (>= 1.2), stringi, waiter,
tibble
grDevices, graphics, stats, utils, sfsmisc (>= 1.0-12)
ggplot2, abind, MASS, irlba, pls, robust, robustbase
network, parallel, ggplot2, reshape2, intergraph
network, parallel, ggplot2, reshape2, intergraph, Matrix
checkmate, ConsensusClusterPlus, graphics, grDevices, flexmix,
StatMatch, stats, utils
stringr, splines, mgcv, Rsurrogate, dplyr, here, tidyr, fs,
KernSmooth, stats, fdapace, grf, lme4, mvnfast, plyr, tibble,
magrittr, glue, purrr, readr, refund, fda, fda.usc
graphics, matrixStats (>= 0.14.1), parallel, stats
graphics, matrixStats (>= 0.50.0), parallel, stats
graphics, matrixStats (>= 0.52), parallel, stats
graphics, matrixStats (>= 0.52), parallel, stats, checkmate
checkmate, matrixStats (>= 0.52), parallel, stats
tools, graphics, grDevices, utils, stats
tools, graphics, grDevices, utils, stats, gridExtra
stats, utils, grDevices, stringr, grid, GGally, gridExtra,
magrittr, dplyr, rlang
stats, ggmulti, utils, grDevices, grid, GGally, gridExtra,
scales, rlang
stats, utils, grDevices, grid, GGally, gridExtra, scales,
rlang
stats, utils, grDevices, grid, gridExtra, scales, patchwork,
rlang
stats, utils, grDevices, grid, gridExtra, scales, patchwork,
rlang, cli
stats, grDevices, magrittr, grid, gridExtra, stringr,
loon.ggplot (>= 1.1.0), colourpicker, base64enc
stats, grDevices, grid, gridExtra, loon.ggplot (>= 1.1.0),
colourpicker, base64enc
stats, utils, grDevices, MASS, loon.ggplot
stats, utils, grDevices, MASS, loon.ggplot, tibble
biomaRt, digest, futile.options, ggfortify, ggplot2, graphics,
grDevices, MASS, methods, dplyr, reshape2, rlang, stats
digest, futile.options, ggfortify, ggplot2, graphics,
grDevices, MASS, methods, dplyr, reshape2, stats
digest, futile.options, ggplot2, graphics, MASS, methods,
dplyr, reshape2
digest, futile.options, ggplot2, graphics, MASS, methods,
httr, dplyr, reshape2
psych, svd, NLRoot, FactoMineR, glmnet, pdist, lars, ade4,
lattice, logmult
psych, svd, NLRoot, FactoMineR, glmnet, pdist, lars, ade4,
lattice, gridExtra, grid, grDevices, stats, graphics
psych, svd, NLRoot, FactoMineR, glmnet, pdist, lars, ade4,
lattice, gridExtra, grid, grDevices, stats, graphics,
data.table, doParallel, parallel, corpcor, foreach
svd, glmnet, stats, data.table, doParallel, parallel, corpcor,
foreach, FactoMineR
svd, glmnet, stats, data.table, doParallel, parallel, corpcor,
foreach, FactoMineR, rARPACK
Rcpp (>= 0.12.8), ggplot2, purrr, MASS, mvtnorm, stats
Rcpp (>= 0.12.8), ggplot2, purrr, MASS, mvtnorm, combinat,
Matrix, stats
Rcpp (>= 0.11.1), decon, flexmix, splines, locpol
stats, utils, nlme (>= 3.1-124), SparseGrid
graphics, stats, spatstat, numDeriv, MomTrunc, quantreg
graphics, stats, spatstat.geom, numDeriv, MomTrunc, quantreg
graphics, stats, spatstat.geom, numDeriv, MomTrunc, quantreg,
MASS
plyr, clue, grid, gridExtra, reshape2, Rcpp
plyr, clue, grid, gridExtra, reshape2, Rcpp, graphics, methods
plyr, clue, grid, gridExtra, reshape2, Rcpp, mvtnorm,
graphics, methods, doParallel, foreach, parallel
Rcpp (>= 1.0.5), MCMCpack, ggplot2, GPArotation
Rcpp (>= 1.0.5), MCMCpack, ggplot2, GPArotation, dplyr,
grDevices
Rcpp (>= 1.0.5), MCMCpack, ggplot2, GPArotation, dplyr,
grDevices, rlang, pROC, coda
graphics, stats, utils, nlme, coda (>= 0.17), multcomp, plyr,
mvtnorm
graphics, stats, utils, nlme, coda (>= 0.17), multcomp, plyr,
mvtnorm, xtable (>= 1.8-2)
estimability, graphics, stats, utils, nlme, coda (>= 0.17),
multcomp, plyr, mvtnorm, xtable (>= 1.8-2)
ggplot2, pracma, mgcv, combinat, matrixStats, MASS
ggplot2, pracma, mgcv, combinat, matrixStats, MASS, dplyr
Rcpp (>= 1.0.5), RcppGSL (>= 0.3.9), graphics, stats
fGarch, Rcpp (>= 0.12.2), landpred, Matrix
fGarch, landpred, Matrix, methods, rootSolve
torch (>= 0.4.0), magrittr, zeallot, rlang, coro, glue,
progress, R6, generics, purrr, ellipsis, fs, prettyunits, cli
torch (>= 0.5.0), magrittr, zeallot, rlang, coro, glue,
progress, R6, generics, purrr, ellipsis, fs, prettyunits, cli
igraph, grDevices, graphics, ellipse, stats, utils
igraph, grDevices, graphics, ellipse, stats, utils, glmmML,
mvtnorm, corpcor
cowplot, dplyr (>= 1.0.0), ggplot2, glue, grDevices, methods,
purrr, rlang (>= 0.4.6), rsample, stats, tibble, tidyselect,
vctrs (>= 0.3.0)
glasso, qgraph, Matrix, psych, mvtnorm, parallel, corpcor,
dplyr, methods
glasso, qgraph, Matrix, psych, mvtnorm, parallel, corpcor,
dplyr, methods, lavaan, semPlot
ggplot2 (>= 3.3.0), grid, RColorBrewer, tibble
data.table, ggplot2, plyr, gridExtra, gWQS, gamm4
geosphere, caTools, ggplot2, randomForest, e1071, caret,
methods, graphics, stats, utils
Rcpp (>= 0.12.14), pcalg, mgm, bnlearn, methods, nnet
ade4, ape, betapart (>= 1.5.4), cluster, dendextend,
FactoMineR, gawdis, geometry, ggplot2, ggrepel, grid, Hmisc,
patchwork, reshape2, rstatix, stats, utils, vegan
refund, denseFLMM, dplyr, xlsx, survival, stats, tidyr, zoo,
ineq, cosinor, cosinor2, abind, accelerometry, ActCR, ActFrag,
minpack.lm, kableExtra, GGIR
dplyr, glmnet, Matrix, rvest, shiny, xml2
curl, stringr, magrittr, assertthat, base64enc
curl, stringr, magrittr, assertthat, base64enc, utils
curl, R6, stringr, magrittr, assertthat, base64enc, utils
curl, R6, stringr, stringi, magrittr, assertthat, base64enc,
utils, rvest, xml2
Biobase, Biostrings, BiocInstaller, RSQLite, pdInfoBuilder,
convert, marray, GEOquery, GEOmetadb, annotate, RGtk2,
gWidgets, gWidgetsRGtk2, tcltk, RBGL, grDevices, stats, utils,
limma, affy, genefilter, simpleaffy, impute, oligo, beadarray,
lumi, GOstats, globaltest, WGCNA, ssize, graph, Rgraphviz
Biobase, Biostrings, BiocInstaller, RSQLite, pdInfoBuilder,
convert, marray, GEOquery, GEOmetadb, amap, annotate, GO.db,
RGtk2, gWidgets, gWidgetsRGtk2, tcltk, RBGL, grDevices, stats,
utils, limma, affy, genefilter, simpleaffy, impute, oligo,
beadarray, lumi, GOstats, globaltest, WGCNA, Rgraphviz, ssize,
KEGGREST, KEGGgraph, graph, Category
Biobase, Biostrings, BiocManager, RSQLite, pdInfoBuilder,
convert, marray, GEOquery, GEOmetadb, amap, annotate, GO.db,
RGtk2, gWidgets, gWidgetsRGtk2, tcltk, RBGL, grDevices, stats,
utils, limma, affy, genefilter, simpleaffy, impute, oligo,
beadarray, lumi, GOstats, globaltest, WGCNA, Rgraphviz, ssize,
KEGGREST, KEGGgraph, graph, Category
Biobase, Biostrings, BiocManager, RSQLite, convert, marray,
GEOquery, GEOmetadb, amap, RGtk2, gWidgets2, gWidgets2RGtk2,
tcltk, RBGL, WGCNA, Rgraphviz, KEGGREST, KEGGgraph, grDevices,
cairoDevice, graphics, stats, utils, methods, pdInfoBuilder,
lumi, oligo, graph, limma, affy, genefilter, simpleaffy,
impute, beadarray, GOstats, GO.db, globaltest, ssize, Category,
annotate
RGtk2, gWidgets2, gWidgets2RGtk2, tcltk, Rgraphviz, ssize,
Biobase, impute, limma, grDevices, graphics, methods, stats,
utils
Biobase, graphics, grDevices, methods, stats, utils
TestDesign (>= 1.2.0), readxl, Rdpack, methods, MASS, diagram
TestDesign (>= 1.3.3), readxl, methods, MASS, diagram
survival, graphics, stats, icenReg, aftgee
survival, graphics, stats, icenReg, aftgee, parallel,
doParallel, foreach, iterators, tcltk
survival, graphics, stats, icenReg, parallel, doParallel,
foreach, iterators, tcltk
httr, jsonlite, lubridate, xts, rhandsontable, DT
dplyr, DBI, lubridate, readr, sp, rgdal, rgeos
dplyr, lubridate, readr, sp, rgdal, rgeos
dplyr, lubridate, phenocamr, readr, rvest, sf, stringr, xml2
sandwich, survival, stats, mediation, emplik, BB, mathjaxr
spam, tools, utils, digest, methods, parallel, stringr
spam, tools, utils, digest, methods, parallel, stringr,
reshape2, stats, nnls, rlang, assertthat
spam, tools, utils, digest, methods, parallel, stringr, rlang,
assertthat
igraph (>= 1.0.1), Matrix, tools, utils, digest, methods,
stringi, yaml, withr
fracdiff, tseries, timeDate, cmprsk, etm, forecast,
forecastHybrid, CombMSC, Epi, quadprog, colorspace, zoo, Rcpp,
gtable, scales, plyr, numDeriv, ggplot2, munsell, tidyr,
ggseas, stats
fracdiff, tseries, timeDate, cmprsk, etm, forecast,
forecastHybrid, CombMSC, Epi, quadprog, colorspace, zoo, Rcpp,
gtable, scales, plyr, numDeriv, ggplot2, munsell, tidyr,
ggseas, stats, tictoc
methods, sp, maptools, abind, ncdf4, reshape2
stats, sp, maptools, abind, data.table, forcats
Rcpp (>= 1.0.6), gridExtra, gridBase, grid, methods, deSolve
grDevices, graphics, stats, celestial (>= 1.4.1), MASS,
plotrix, sm, mapproj, RColorBrewer
grDevices, graphics, stats, celestial (>= 1.4.1)
grDevices, graphics, stats, celestial (>= 1.4.1), MASS,
plotrix, sm, mapproj
grDevices, graphics, stats, celestial (>= 1.4.1), MASS,
plotrix, sm, mapproj, RColorBrewer, RANN
grDevices, graphics, stats, celestial (>= 1.4.1), MASS,
plotrix, sm, mapproj, RANN
Rcpp (>= 0.12.12), magrittr, knitr, curl
data.table, tidyr, ggplot2, lpSolve, quadprog
commonmark, gmailr, rstudioapi, googledrive, rmarkdown, dplyr,
glue, googlesheets4, magrittr, withr, purrr, utils, fs,
lifecycle, shiny, miniUI
commonmark, gmailr, rstudioapi, googledrive, rmarkdown, glue,
magrittr, purrr, utils, fs, lifecycle, shiny, miniUI
raster, cluster, grDevices, rgdal, prismatic
methods, utils, graphics, parallel, codetools, CodeDepends,
whisker
ggplot2, Matrix, knitr, shiny, shinyjs, shinyBS, visNetwork,
rmarkdown, rlang, MASS, testthat (>= 2.1.0)
ggplot2, Matrix, methods, shiny, shinyjs, shinyBS, visNetwork,
rlang, MASS
curl, rgdal, raster, sp, xml2, grid, gridExtra, httr, dplyr,
stringi, tidyr, methods, stats, utils
curl, rgdal, raster, sp, xml2, grid, gridExtra, httr, dplyr,
stringi, tidyr, methods, stats, utils, rlang
stats, magrittr (>= 1.0.1), plotly (>= 3.6.0), ggplot2
utils, httr (>= 0.3), jsonlite (>= 0.9.12), functional (>=
0.6)
utils, stats, magrittr, httr (>= 1.0.0), jsonlite (>= 0.9.12),
functional (>= 0.6), zoo (>= 1.7-11), psych, base64enc
utils, stats, magrittr, httr (>= 1.0.0), jsonlite (>= 0.9.12),
functional (>= 0.6), zoo (>= 1.7-11), psych, base64enc,
htmlwidgets (>= 0.6), DT (>= 0.2), htmltools
utils, stats, methods, magrittr, httr (>= 1.0.0), jsonlite (>=
0.9.12), functional (>= 0.6), zoo (>= 1.7-11), psych,
base64enc, htmlwidgets (>= 0.6), DT (>= 0.2), htmltools, purrr
(>= 0.2.4), readr (>= 1.2.0), dplyr (>= 0.7.5), tidyselect (>=
1.0.0), tibble (>= 2.0.0)
shiny (>= 1.0.3), miniUI, htmltools, htmlwidgets, knitr,
methods, tools, base64enc, grDevices, codetools, webshot
shiny (>= 1.0.3), miniUI, htmltools, htmlwidgets, knitr,
methods, tools, base64enc, grDevices, codetools, webshot,
shinyjs
shiny, miniUI, htmlwidgets, knitr, methods, tools, base64enc,
grDevices
shiny, miniUI, htmlwidgets, lazyeval, knitr, methods, tools,
base64enc, grDevices
shiny, miniUI, htmltools, htmlwidgets, lazyeval, knitr,
methods, tools, base64enc, grDevices
shiny (>= 1.0.3), miniUI, htmltools, htmlwidgets, knitr,
methods, tools, base64enc, grDevices, codetools
covr, tibble, dplyr, messydates, lubridate, pkgdown, purrr,
rlang, roxygen2, stringr, usethis, jsonlite, remotes, httr,
progress, ggplot2
tibble, dplyr, messydates, lubridate, purrr, rlang, stringr,
usethis, jsonlite, remotes, httr, progress, ggplot2
tibble, dplyr, messydates, purrr, rlang, stringr, usethis,
jsonlite, remotes, httr, ggplot2 (>= 3.4.0), migraph, cshapes,
ggraph, janitor, tidyr, plyr, zoo
lavaan, boot, parallel, pbapply, stats, ggplot2
lavaan, boot, parallel, pbapply, stats, ggplot2, igraph
Rcpp, Rdpack, RSpectra, Matrix, shapes, stats, utils
Rcpp, Rdpack, RSpectra, Matrix, mclust, shapes, stats, utils
Rcpp, Rdpack, RSpectra, Matrix, cluster, mclust, shapes,
stats, utils
Matrix, Rcpp, Rdpack, RSpectra, Rtsne, cluster, labdsv,
shapes, stats, utils
Matrix, Rcpp, Rdpack, RSpectra, Rtsne, cluster, labdsv, nabor,
shapes, stats, utils
Matrix, Rcpp, Rdpack, RSpectra, Rtsne, cluster, labdsv, nabor,
shapes, stats, utils, fastcluster, dbscan
Matrix, Rcpp, Rdpack, RSpectra, Rtsne, cluster, labdsv, nabor,
shapes, stats, utils, fastcluster, dbscan, reticulate
Matrix, Rcpp, Rdpack, RSpectra, Rtsne, RANN, cluster, labdsv,
shapes, stats, utils, fastcluster, dbscan
RColorBrewer, Hmisc, quantreg, classInt, sp, colorspace,
reshape2
RColorBrewer, Hmisc, classInt, sp, colorspace, reshape2
dplyr, ggplot2, magrittr, mrgsolve (>= 0.10.9), optimx, purrr,
rlang, stats, stringr, tibble, tidyr
dplyr, ggplot2, magrittr, mrgsolve (>= 1.0.0), optimx, purrr,
rlang, stringr, tibble, tidyr
dplyr, ggplot2, magrittr, mrgsolve (>= 1.0.0), optimx,
progress, purrr, rlang, stringr, tibble, tidyr
dplyr, ggplot2, magrittr, mrgsolve (>= 1.0.0), progress,
purrr, rlang, stringr, tidyr
httr, sf, jsonlite, purrr, curl, dplyr (>= 1.0.0), tidyr (>=
1.0.0), aws.s3, stringi, slippymath, protolite, rlang,
geojsonsf, magick, leaflet
httr, sf, jsonlite, purrr, curl, dplyr (>= 1.0.0), tidyr (>=
1.0.0), aws.s3, stringi, slippymath, protolite, rlang,
geojsonsf, magick, leaflet, units, raster, png, jpeg
magrittr, htmlwidgets, htmltools, yaml, purrr, geojsonsf,
methods
googlePolylines (>= 0.6.2), htmlwidgets, htmltools, scales,
shiny, jsonlite, magrittr, viridisLite
colourvalues (>= 0.2.2), geojsonsf (>= 1.3.0), googlePolylines
(>= 0.7.2), htmltools, htmlwidgets, jsonify (>= 0.2.0),
magrittr, Rcpp, shiny
colourvalues (>= 0.3.4), googlePolylines (>= 0.7.2), geojsonsf
(>= 1.3.3), htmltools, htmlwidgets, jsonify (>= 1.1.1),
magrittr, Rcpp, shiny, sfheaders (>= 0.2.1)
colourvalues (>= 0.3.4), googlePolylines (>= 0.7.2), geojsonsf
(>= 1.3.3), htmlwidgets, jsonify (>= 1.1.1), magrittr, Rcpp,
shiny, sfheaders (>= 0.2.1)
colourvalues (>= 0.3.4), googlePolylines (>= 0.7.2), geojsonsf
(>= 1.3.3), htmlwidgets, jsonify (>= 1.1.1), magrittr, Rcpp,
shiny, sfheaders (>= 0.2.2)
dplyr, htmltools (>= 0.3), htmlwidgets, jsonlite, leaflet,
leaflet.extras, mapview, miniUI, sf, shiny
dplyr, htmltools (>= 0.3), htmlwidgets, jsonlite, leaflet,
leaflet.extras, mapview, miniUI, sf (>= 0.5-2), shiny
dplyr, htmltools (>= 0.3), htmlwidgets, jsonlite, leaflet (>=
2.0.1), leaflet.extras (>= 1.0), mapview, miniUI, sf (>=
0.5-2), shiny
dplyr, htmltools (>= 0.3), htmlwidgets, jsonlite, leaflet (>=
2.0.1), leaflet.extras (>= 1.0), leafpm, mapview, miniUI, sf
(>= 0.5-2), shiny
dplyr, htmltools (>= 0.3), htmlwidgets, jsonlite, leafem,
leaflet (>= 2.0.1), leaflet.extras (>= 1.0), leafpm, mapview,
methods, miniUI, raster, scales, sf (>= 0.5-2), shiny, sp
dplyr, ggplot2, mgcv, doParallel, parallel, foreach, stringi,
plotly, visNetwork, LPmerge, lazyeval, tidyr
spruce, Seurat, stats, dbarts, ggplot2, dplyr, ggalluvial,
plotly, shiny, rlang
curl, data.table, dplyr, httr, magrittr, pbapply, rvest, sf,
stringr, terra, tibble, tidyr, tidyselect
curl, data.table, dplyr, httr, magrittr, pbapply, purrr,
rvest, sf, stringr, terra, tibble, tidyr, tidyselect
curl, dplyr, httr, magrittr, pbapply, purrr, rvest, sf,
stringr, terra, tibble, tidyr, tidyselect
methods, grDevices, stats, utils, graphics
Rcpp (>= 0.12.6), RCurl, plotly, fields, ggpubr, ggsci,
rstudioapi, plot3D, memuse, dplyr, crayon, cli, magrittr,
reshape2, ggplot2, smacof, princurve, dendextend, vcfR
Rcpp (>= 0.12.6), RCurl, plotly, fields, ggpubr, ggsci,
rstudioapi, scatterplot3d, dplyr, crayon, cli, magrittr,
reshape2, ggplot2, smacof, princurve, dendextend, vcfR, zoo
Rcpp (>= 0.12.6), RCurl, fields, ggpubr, ggsci, rstudioapi,
scatterplot3d, dplyr, crayon, cli, magrittr, reshape2, ggplot2,
smacof, princurve, dendextend, vcfR, zoo, plotly
Rcpp (>= 0.12.6), RcppParallel, RCurl, fields, ggpubr, ggsci,
rstudioapi, scatterplot3d, dplyr, crayon, cli, magrittr,
reshape2, ggplot2, smacof, princurve, dendextend, vcfR, zoo,
plotly
Rcpp (>= 0.12.6), RcppParallel, RCurl, fields, ggpubr, ggsci,
rstudioapi, scatterplot3d, dplyr, crayon, cli, magrittr,
reshape2, ggplot2, princurve, dendextend, vcfR, zoo, plotly
memoise, progress, pbmcapply, parallel, parallelly, purrr,
rlang
methods, utils, stats, graphics, ggplot2, leaflet, spocc (>=
0.4.5), sp, rworldmap, RColorBrewer, httr (>= 1.0.0), gistr
ggplot2, leaflet, spocc (>= 0.5.4), sp, rworldmap,
RColorBrewer, httr (>= 1.2.0), gistr
ggplot2, leaflet, spocc (>= 0.6.0), sp, rworldmap,
RColorBrewer, jsonlite, gistr
ggplot2, leaflet, spocc (>= 0.6.0), sp, rworldmap,
RColorBrewer, jsonlite, gistr, data.table
ggplot2, leaflet, spocc (>= 0.6.0), sp, maps, RColorBrewer,
jsonlite, gistr, data.table
magrittr, xml2, sf, bitops, stars, RgoogleMaps
xml2, sf, bitops, stars, RgoogleMaps, httr
cli, curl, fs, glue, magick, magrittr, memoise, pdftools, png,
purrr, raster, Rcpp, reproj, RNiftyReg, sf, slippymath, tibble
classInt, graphics, methods, Rcpp, stats, utils, grDevices
classInt, graphics, methods, Rcpp, sf, stats, utils, grDevices
sf (>= 0.9-5), curl, graphics, png, terra, slippymath
sf (>= 0.9-5), curl, graphics, png, terra, tools, slippymath
sf (>= 0.9-5), curl, graphics, grDevices, png, terra, tools,
slippymath
foreign (>= 0.8), methods, grid, lattice, stats
foreign (>= 0.8), methods, grid, lattice, stats, utils,
grDevices
sp, raster, satellite, scales (>= 0.2.5), brew, htmlwidgets,
htmltools, png, Rcpp (>= 0.11.3), lattice, latticeExtra, rgdal,
gdalUtils, data.table, rasterVis, OpenStreetMap
sp, raster, satellite, scales (>= 0.2.5), brew, htmlwidgets,
htmltools, png, Rcpp (>= 0.11.3), lattice, latticeExtra, rgdal,
gdalUtils, data.table, webshot, viridisLite
sp, raster, satellite, scales (>= 0.2.5), brew, htmlwidgets,
htmltools, png, Rcpp (>= 0.11.3), lattice, gdalUtils,
data.table, webshot, viridisLite, sf, base64enc
sp, raster, satellite, scales (>= 0.2.5), brew, htmlwidgets,
htmltools, png, Rcpp (>= 0.11.3), lattice, gdalUtils, webshot,
viridisLite, sf, base64enc
base64enc, htmltools, htmlwidgets, lattice, leafem, leaflet
(>= 2.0.0), leafpop, png, raster, satellite, scales (>= 0.2.5),
servr, sf, sp, webshot
leaflet, sp, raster, satellite, scales (>= 0.2.5), brew,
htmlwidgets, htmltools, png, Rcpp (>= 0.11.3), lattice,
gdalUtils, webshot, viridisLite, sf, base64enc, svglite, uuid
leaflet(>= 1.0.0), sp, raster, satellite, scales (>= 0.2.5),
brew, htmlwidgets, htmltools, png, Rcpp (>= 0.11.3), lattice,
webshot, viridisLite, sf, stars, base64enc, svglite, uuid
base64enc, brew, htmltools, htmlwidgets, lattice, leaflet (>=
1.0.0), png, raster, Rcpp (>= 0.11.3), satellite, scales (>=
0.2.5), sf, sp, stars, svglite, uuid, viridisLite, webshot
base64enc, brew, htmltools, htmlwidgets, lattice, leaflet (>=
2.0.0), png, raster, Rcpp (>= 0.11.3), satellite, scales (>=
0.2.5), sf, sp, svglite, uuid, viridisLite, webshot
base64enc, brew, htmltools, htmlwidgets, lattice, leafem,
leaflet (>= 2.0.0), leafpop, png, raster, Rcpp (>= 0.11.3),
satellite, scales (>= 0.2.5), sf, sp, svglite, uuid,
viridisLite, webshot
base64enc, htmltools, htmlwidgets, lattice, leafem, leaflet
(>= 2.0.0), leafpop, png, raster, satellite, scales (>= 0.2.5),
sf, sp, viridisLite, webshot
base64enc, htmltools, htmlwidgets, lattice, leafem, leaflet
(>= 2.0.0), leafpop, png, raster, satellite, scales (>= 0.2.5),
sf, sp, webshot
stats, Matrix, graphics, grDevices, plyr, mvtnorm,
RColorBrewer, minpack.lm, zoo, numDeriv, magrittr, scales
readr, rlang, dplyr, usethis, devtools, SnowballC, lubridate,
rvest, scholar, purrr, stringi, stringr, tidytext, tidyr,
tidyverse, treemapify, tibble, widyr, writexl, igraph
readr, httr, rlang, dplyr, usethis, devtools, lubridate,
rvest, scholar, purrr, stringi, stringr, tidytext, tidyr,
tidyverse, treemapify, tibble, widyr, writexl, igraph
checkmate, generics, insight, methods, numDeriv
checkmate, generics, insight (>= 0.14.5), methods, numDeriv
checkmate, generics, insight (>= 0.14.5), methods
checkmate, generics, insight (>= 0.16.0), methods
checkmate, data.table, generics, insight (>= 0.17.1), methods
checkmate, data.table, generics, insight (>= 0.18.0), methods
checkmate, data.table, generics, insight (>= 0.18.4), methods
checkmate, data.table, generics, insight (>= 0.18.5), methods
stats, prediction (>= 0.1.11), graphics, compiler, MASS
utils, stats, prediction (>= 0.2.8), data.table, graphics,
MASS
utils, stats, prediction (>= 0.3.6), data.table, graphics,
grDevices, MASS
stats, utils, graphics, grDevices, geosphere, sp, bit
graphics, stats, utils, R2admb, truncnorm, coda, ggplot2,
Matrix, numDeriv, expm, Rcpp (>= 0.9.13), optimx (>= 2013.8.6)
graphics, stats, utils, R2admb, truncnorm, coda, Matrix,
numDeriv, expm, Rcpp (>= 0.9.13), optimx (>= 2013.8.6)
graphics, stats, utils, R2admb, truncnorm, coda, Matrix,
numDeriv, expm, Rcpp (>= 0.9.13), TMB, optimx (>= 2013.8.6)
R2admb, truncnorm, coda, optimx (>= 2013.8.6), ggplot2,
Matrix, numDeriv, Rcpp (>= 0.9.13)
R2admb, truncnorm, coda, optimx (>= 2013.8.6), ggplot2,
Matrix, numDeriv, Rcpp (>= 0.9.13), plyr
R2admb, truncnorm, coda, ggplot2, Matrix, numDeriv, Rcpp (>=
0.9.13), plyr, optimx (>= 2013.8.6), expm
graphics, stats, utils, R2admb, truncnorm, coda, Matrix,
numDeriv, expm, Rcpp (>= 0.9.13), TMB, optimx (>= 2013.8.6),
data.table, knitr, kableExtra, bookdown
Rfacebook, forecast, zoo, plyr, dplyr, ggplot2, xlsx, grid,
scales, shiny, rmarkdown, knitr, ggthemes
dplyr (>= 0.7.6), Formula, MASS (>= 7.3-50), methods, rlang
(>= 0.2.1), Rcpp, RcppGSL, RcppParallel, stats
methods, yaml, testthat (>= 2.0.0), httr (>= 1.0.0), checkmate
(>= 1.0.0), codetools, lazyeval, rlang
methods, yaml, testthat (>= 2.0.0), httr (>= 1.0.0), checkmate
(>= 1.0.0), codetools, rlang
igraph, Matrix, matlab, expm, stats4, parallel
igraph, Matrix, matlab, expm, stats4, parallel, Rcpp (>=
0.11.5), RcppParallel
igraph, Matrix, matlab, expm, stats4, parallel, Rcpp (>=
0.11.5), RcppParallel, utils
igraph, Matrix, matlab, expm, stats4, parallel, Rcpp (>=
0.11.5), RcppParallel, utils, MultinomialCI, stats
igraph, Matrix, matlab, expm, stats4, parallel, Rcpp (>=
0.11.5), RcppParallel, utils, stats
igraph, Matrix, matlab, expm, stats4, parallel, Rcpp (>=
0.11.5), RcppParallel, utils, stats, grDevices
igraph, Matrix, matlab, expm, stats4, parallel, Rcpp (>=
0.12.18), RcppParallel, utils, stats, grDevices
igraph, Matrix, matlab, expm, stats4, parallel, Rcpp (>=
1.0.2), RcppParallel, utils, stats, grDevices
igraph, Matrix, expm, stats4, parallel, Rcpp (>= 1.0.2),
RcppParallel, utils, stats, grDevices
RSQLite, gdistance, geosphere, sp, raster, ncdf
RSQLite, gdistance, geosphere, sp, raster, ncdf, plotrix,
shape
DBI, RSQLite, gdistance, geosphere, sp, raster, ncdf, plotrix,
shape, reshape2, adehabitatMA
DBI, RSQLite, gdistance, geosphere, sp, raster, ncdf, plotrix,
shape, reshape2, adehabitatMA, ggplot2
DBI, RSQLite, gdistance, geosphere, sp, raster, ncdf, plotrix,
shape, reshape2, adehabitatMA, ggplot2, methods
DBI, RSQLite, gdistance, geosphere, sp, raster, ncdf4,
plotrix, shape, reshape2, adehabitatMA, ggplot2, methods
DBI, RSQLite, gdistance, geosphere, sp, raster, ncdf, plotrix,
shape, reshape2
MASS, glmnet, Matrix, foreach, survey, dplyr, magrittr, rpms,
boot, stats, Rdpack
glmnet, Matrix, foreach, survey, dplyr, magrittr, rpms, boot,
stats, Rdpack
glmnet, survey, dplyr, magrittr, rpms, boot, stats, Rdpack
assertthat, utils, stats, plyr, rmeta, Rcpp (>= 0.12.11),
mvtnorm, abind, mixsqp
assertthat, utils, stats, plyr, rmeta, Rcpp (>= 0.12.11),
mvtnorm, abind
assertthat, utils, stats, plyr, rmeta, Rcpp (>= 0.12.11),
mvtnorm, abind, softImpute
gdalUtils, dismo, dplyr, e1071, lubridate, magrittr, maptools,
raster, rgdal, sp, stats, tidyverse, utils, virtualspecies
dplyr, e1071, lubridate, magrittr, raster, sp, stats, utils,
dplyr, tidyr, broom, assertive, magrittr, stats, utils,
lazyeval, MASS
dplyr, tidyr, broom, assertive, magrittr, stats, utils,
lazyeval
dplyr, tidyr, broom, magrittr, stats, utils, lazyeval
broom, dplyr, magrittr, purrr, rlang, stats, tibble, tidyr,
tidyselect, utils
Rcpp (>= 0.11.5), RANN, corrplot, xtable, repmis
rstudioapi, tibble, readr, jsonlite, clipr, purrr, rlang
mvnfast, stats, rcbalance, Rcpp (>= 1.0.3), utils
ggplot2, mvnfast, rcbalance, Rcpp, stats, utils
rcbsubset, plyr, coin, weights, mvtnorm, MASS,Hmisc
rcbsubset (>= 1.1.4), plyr, coin, weights, mvtnorm, MASS,
Hmisc, sandwich
rcbsubset (>= 1.1.4), plyr, coin, weights, mvtnorm, MASS,
sandwich, magrittr
rcbsubset (>= 1.1.4), plyr, coin, weights, mvtnorm, MASS,Hmisc
Rcpp (>= 0.11.2), lpSolve (>= 5.6.6), partitions
Rcpp (>= 0.11.2), lpSolve (>= 5.6.6), partitions, stats
Rcpp (>= 0.11.2), rJava, partitions, stats
Rcpp (>= 0.11.2), rJava, lpSolve, lattice, partitions,
parallel, stats
Rcpp (>= 0.12.12), RcppProgress (>= 0.2), rJava, lpSolve,
lattice, partitions, parallel, stats, utils
FNN, graphics, grDevices, Rcpp, sn, stats
jpeg, magrittr, methods, png, readbitmap, stringr, downloader,
imager, moments
purrr, base64enc, httr, rstudioapi, texPreview
purrr, base64enc, httr, rstudioapi, texPreview, magick
purrr, base64enc, httr, rstudioapi, texPreview, magick, utils
purrr, base64enc, httr, rstudioapi, texPreview (>= 2.0.0),
magick, utils
dfoptim, mvtnorm, seriation, igraph, gplots, cba
methods, graphics, stats, utils, data.table, dplyr, tidyr,
tidyverse, plotly, DT, shinydashboard, shinyWidgets, forecast,
ISOweek
methods, graphics, stats, utils, data.table, dplyr, tidyr,
tidyselect, plotly, DT, shinydashboard, shinyWidgets, forecast,
parsedate, lubridate
assertive, matrixcalc, psych, lavaan, MASS
assertive, matrixcalc, lavaan, psych, MASS
assertive, matrixcalc, lavaan, psych, MASS, methods
assertive, matrixcalc, lavaan, MASS, methods, psych
dplyr, Hmisc, magrittr, purrr, rlang, tibble
assertthat, dplyr, Hmisc, magrittr, purrr, rlang, stringi,
tibble
assertthat, dplyr, lifecycle, magrittr, purrr, RCLabels,
rlang, tibble
dplyr, magrittr, matsbyname, purrr, rlang, rlist, tibble,
tidyr
dplyr, magrittr, matsbyname, purrr, rlang, tibble, tidyr
dplyr, ggplot2, lubridate, tidyr, magrittr, ggrepel
data.table, gtools, stringr, igraph, RColorBrewer, ggplot2
data.table, gtools, stringr, igraph, RColorBrewer, ggplot2,
Rdpack
magrittr, purrr, rlang, mstate, MCMCpack, dplyr, mvtnorm,
survival
exactRankTests(>= 0.8-23), mvtnorm(>= 0.5-10), stats, graphics
abind, bigmemory, foreach, lme4, logging
mgcv, extracat, scagnostics, diptest, hexbin,scales, dplyr,
magrittr, shiny, seriation, ggplot2, gridExtra, GGally, Rcpp,
stats, graphics, utils, grDevices
scagnostics, mgcv, energy, diptest, hexbin,scales, dplyr,
magrittr, shiny, seriation, ggplot2, gridExtra, GGally, Rcpp,
stats, graphics, utils, grDevices
Matrix, survival, splines, lattice, nnls, quadprog, utils
Matrix, survival, splines, lattice, nnls, quadprog, utils,
graphics, grDevices
Matrix, survival, splines, lattice, nnls, quadprog, utils,
graphics, grDevices, party (>= 1.0-23)
Matrix, survival, splines, lattice, nnls, quadprog, utils,
graphics, grDevices, party (>= 1.1-0)
Matrix, survival, splines, lattice, nnls, quadprog, utils,
graphics, grDevices, partykit (>= 1.2-1)
Matrix, survival (>= 3.2-10), splines, lattice, nnls,
quadprog, utils, graphics, grDevices, partykit (>= 1.2-1)
reticulate, readr, tibble, magrittr, purrr, dplyr
reticulate, tibble, magrittr, purrr, dplyr, lubridate
reticulate, tibble, magrittr, purrr, dplyr, lubridate,
stringr, tidyr
data.table, dplR, MASS, Matrix, Rfast, stats
KFAS, Matrix, pscl, MCMCpack, MASS, ggplot2, reshape2, BBmisc,
matrixStats, methods
checkmate (>= 1.1), parallelMap (>= 1.3), reshape2 (>= 1.4.1),
gtools, vegan, ggplot2 (>= 1.0.0), lhs
Rcpp (>= 0.11.3) , grDevices, graphics, stats, RColorBrewer,
PAFit
dplyr, ggplot2, ggthemes, gridExtra, magrittr, tidyr
dplyr, ggplot2, ggthemes, gridExtra, magrittr, rlang, stats,
tidyr
babette (>= 2.1.5), beautier (>= 2.4), beastier (>= 2.2.1),
curl, devtools, mauricer (>= 2.3), Rmpfr, testit, txtplot
babette (>= 2.3), beautier (>= 2.6.2), beastier (>= 2.4.6),
curl, devtools, mauricer (>= 2.5), Rmpfr, testit, txtplot
backports, checkmate (>= 2.0.0), lifecycle, data.table (>=
1.13.6), mlr3 (>= 0.10), mlr3misc (>= 0.8.0), mlr3pipelines (>=
0.3.0), R6 (>= 2.4.1), rpart, glmnet
backports, checkmate (>= 2.0.0), data.table (>= 1.13.6), mlr3
(>= 0.10), mlr3misc (>= 0.8.0), mlr3pipelines (>= 0.3.0), R6
(>= 2.4.1), rmarkdown, rpart, glmnet
dummies, magic, parallel, stringr, ggplot2, wordcloud,
RColorBrewer, methods, stats, utils, grDevices
magic, stringr, ggplot2, wordcloud, RColorBrewer, stats,
utils, grDevices
magic, stringr, ggplot2, wordcloud, RColorBrewer, stats,
utils, grDevices, Rcpp (>= 1.0.9)
stats, Matrix, assertthat, graphics, Rcpp (>= 0.12.16)
spam, rsm, fields, maxLik, nleqslv, spdep
spam, rsm, fields, maxLik, nleqslv, spdep, spatialreg
crayon, dplyr, Rcpp, readr, stringi, stringr, tm, xml2, yaml
stats, graphics, grDevices, methods, foreach, iterators,
utils, Rcpp (>= 0.12)
gRbase, abn, coda, ggplot2, cowplot, ggpubr
abn, coda, gRbase, ggplot2, cowplot, ggpubr
chk, abind, universals, extras, term, nlist, mcmcr (>= 0.3.0),
purrr
abind, chk, extras, mcmcr, nlist, purrr, universals
abind, checkr, coda, graphics, stats, tibble, utils
abind, chk, coda, utils, stats, term, nlist, purrr,
universals, extras, lifecycle
abind, chk, coda, extras, generics, lifecycle, nlist (>=
0.3.1), purrr, stats, term, universals, utils
abind, chk, coda, extras, generics, lifecycle, nlist, purrr,
stats, term, universals, utils
abind, chk (>= 0.7.0), coda, extras, generics, lifecycle,
nlist, purrr, stats, term, universals, utils
Matrix (>= 1.2.0), Rcpp (>= 0.11.0), methods, GIGrvg, loo (>=
2.0.0), matrixStats
utils, ellipse, Rcpp (>= 0.12.10), fftwtools, testthat
methods, Matrix (>= 1.5-0), gbutils, MASS, Rdpack
parallel, R.utils, checkmate (>= 1.6.3), R6
testthat (>= 2.3), stats, rlang, Rdpack (>= 0.7), methods,
simctest (>= 2.6)
assertthat, igraph, ggplot2, purrr, magrittr, reshape2, shiny,
dplyr, psych, rlang
stats, ggplot2, reshape2, devtools, roxygen2, knitr, testthat,
rmarkdown, spelling, httr, covr, gh, rlang, openssl, git2r,
pkgbuild, utils, curl
stats, ggplot2, reshape2, devtools, roxygen2, knitr, testthat,
rmarkdown, spelling, httr, covr, gh, rlang, openssl, git2r,
pkgbuild, utils, curl, VIM, FactoMineR, mice, grDevices,
graphics
methods, graphics, grDevices, stats, Matrix
CDM, coda, graphics, miceadds, sirt, stats, TAM, utils
CDM, coda, graphics, MASS, miceadds (>= 2.13-60), Rcpp, sirt,
stats, TAM, utils
CDM, coda, graphics, MASS, miceadds, sirt, stats, TAM, utils
CDM, coda, graphics, MASS, miceadds, Rcpp, sirt, stats, TAM,
utils
CDM (>= 7.0-12), coda, graphics, MASS, miceadds (>= 2.13-60),
Rcpp, sirt, stats, utils
CDM (>= 7.1-2), coda, graphics, MASS, miceadds (>= 2.13-60),
Rcpp, sirt, stats, utils
CDM, coda, graphics, miceadds (>= 3.2-23), Rcpp, sirt, stats,
utils
MASS, glmgraph, magic, reshape2, ggplot2, scalreg, glmnet,
nlme, nloptr
reshape2, ggplot2, nlme, boot, nloptr, rootSolve, psych,
magic, glmnet
babynames, DBI, dbplyr, downloader, dplyr, ggplot2, mosaic,
RMySQL, tidyverse
babynames, DBI, dbplyr, downloader, dplyr, ggplot2, mosaic,
RMySQL
babynames, DBI, dbplyr, downloader, dplyr, fs, ggplot2,
mosaic, RMySQL
babynames, DBI, dbplyr, downloader, dplyr, fs, ggplot2,
htmlwidgets, RMySQL, skimr, tibble, webshot
babynames, DBI, dbplyr, downloader, dplyr, fs, ggplot2,
htmlwidgets, kableExtra, RMySQL, skimr, stringr, tibble,
webshot
babynames, DBI, dbplyr, downloader, dplyr, fs, ggplot2,
htmlwidgets, kableExtra, RMariaDB, skimr, stringr, tibble,
webshot
utils, stats, lubridate, Sequential, mds
cowplot, hrbrthemes, ggplot2 (>= 3.3.0), ggtext, ggthemes,
tvthemes
lattice,tcltk,emdist,ggplot2 (>= 2.0.0),
gridExtra,reshape2,plyr,gtools, Rcpp (>= 0.12.11)
lattice,tcltk,emdist,ggplot2 (>= 2.2.1),
gridExtra,reshape2,plyr,gtools, Rcpp (>= 0.12.11)
assertthat (>= 0.2.0), cli, httr (>= 1.3.1), jsonlite (>=
1.5), rappdirs (>= 0.3.3), stats, utils
stats, grDevices, rlang, utils, car, Hmisc, ROSE, pROC,
ResourceSelection, InformationValue, gmodels, dplyr, tibble,
givitiR, coxphw, ggplot2, writexl, MASS
microeco, magrittr, dplyr, igraph, reshape2
R6, microeco (>= 0.12.0), magrittr, dplyr, igraph, reshape2,
ggpubr
spdep, GSIF, methods, meteoland (>= 0.7.1), Rcpp (>= 0.12.12)
spdep, GSIF, ggplot2, methods, meteoland (>= 0.8.1), Rcpp (>=
0.12.12)
spdep, ggplot2, methods, meteoland (>= 0.8.1), Rcpp (>=
0.12.12)
spdep, ggplot2, methods, httr, jsonlite, meteoland (>= 0.8.1),
Rcpp (>= 0.12.12)
spdep, ggplot2, methods, httr, jsonlite, meteoland (>= 0.8.1),
Rcpp (>= 1.0.6)
ggplot2, meteoland (>= 0.8.1), Rcpp (>= 1.0.6), shiny
lpSolve, Hmisc, lme4 (>= 1.0), stats, graphics, grDevices,
utils
lpSolve, Hmisc, lme4 (>= 1.0), stats, graphics, grDevices,
utils, boot
audio, checkmate, deldir, graphics, stats, utils, wesanderson
methods, dplyr, curl, jsonlite, httr, stringr, rlang, vroom,
bib2df, tibble, progress, lubridate
methods, dplyr, curl, jsonlite, httr, stringr, rlang, vroom,
bib2df, tibble, progress, lubridate, purrr, data.table
dplyr, furrr, future, httr, jsonlite, memoise, purrr,
lubridate
survival , dplyr , tidyr , ggplot2 , mvtnorm , matrixcalc
sp, reticulate, graphics, scales, ggmap, ggplot2,
plotGoogleMaps, plyr
utils, ggplot2, plyr, dplyr, reticulate, Rcpp, shiny, shinyjs,
tidyr, leaflet, tibble
utils, ggplot2, plyr, dplyr, reticulate, Rcpp, shiny, shinyjs,
tidyr, leaflet, tibble, methods
gtools, RColorBrewer, RNifti, grDevices, RGtk2, cairoDevice,
methods, jsonlite
sm, boot, reshape2, RColorBrewer, mixtools, stringr
sm, boot, reshape2, RColorBrewer, mclust, ggplot2, tidyr,
dplyr, stringr
sm, boot, reshape2, RColorBrewer, mclust, ggplot2, tidyr,
dplyr, stringr, RcppRoll, EnvStats
sm, boot, RColorBrewer, mclust, ggplot2, tidyr, dplyr,
RcppRoll, EnvStats
sm, boot, RColorBrewer, mclust, ggplot2, tidyr, dplyr, purrr,
RcppRoll, EnvStats
sm, boot, RColorBrewer, mclust, ggplot2, tidyr, dplyr, purrr,
RcppRoll, EnvStats, methods
sm, boot, reshape2, RColorBrewer, mixtools, stringr, magick
shiny, shinythemes, shinydashboard, shinyBS, shinyjs,
RColorBrewer, ggthemes, reshape2, R.utils, openxlsx, readxl,
stringr, readr, magick, DT, gplots, RODBC, mixtools,
formattable, ggplot2, plotly, mem (>= 2.5)
shiny, shinythemes, shinydashboard, shinyBS, shinyjs,
RColorBrewer, ggthemes, reshape2, R.utils, openxlsx, readxl,
stringr, readr, DT, gplots, RODBC, mixtools, formattable,
ggplot2, plotly, mem (>= 2.5)
shiny, shinythemes, shinydashboard, shinyBS, shinyjs,
RColorBrewer, magrittr, tidyr, dplyr, openxlsx, foreign, haven,
readxl, stringr, stringi, DT, RODBC, formattable, ggplot2,
plotly, mem (>= 2.13)
shiny, shinythemes, shinydashboard, shinydashboardPlus,
shinyBS, shinyjs, RColorBrewer, tidyr, dplyr, openxlsx,
foreign, haven, readxl, stringr, stringi, DT, RODBC,
formattable, ggplot2, plotly, mem (>= 2.13)
shiny, shinythemes, shinydashboard, shinyWidgets, shinyBS,
shinyjs, RColorBrewer, tidyr, dplyr, openxlsx, foreign, haven,
readxl, stringr, stringi, DT, RODBC, formattable, ggplot2,
plotly, mem (>= 2.15)
shiny, shinydashboard, shinyWidgets, shinyBS, shinyjs,
RColorBrewer, tidyr, dplyr, stringr, stringi, DT, formattable,
ggplot2, plotly, mem (>= 2.17)
shiny, shinythemes, shinydashboard, shinyBS, shinyjs,
RColorBrewer, ggthemes, reshape2, openxlsx, readxl, stringr,
stringi, DT, RODBC, formattable, ggplot2, plotly, mem (>= 2.5)
shiny, shinythemes, shinydashboard, shinyBS, shinyjs,
RColorBrewer, ggthemes, reshape2, openxlsx, readxl, stringr,
stringi, DT, RODBC, formattable, ggplot2, plotly, mem (>= 2.9)
shiny, shinythemes, shinydashboard, shinyBS, shinyjs,
RColorBrewer, ggthemes, reshape2, openxlsx, readxl, stringr,
stringi, DT, RODBC, formattable, ggplot2, plotly, mem (>= 2.10)
shiny, shinythemes, shinydashboard, shinyBS, shinyjs,
RColorBrewer, ggthemes, magrittr, tidyr, dplyr, openxlsx,
readxl, stringr, stringi, DT, RODBC, formattable, ggplot2,
plotly, mem (>= 2.10)
ggplot2, graphics, grDevices, grid, gridGraphics, magick,
methods
ggplot2, graphics, grDevices, grid, magick, methods, utils
ggplot2, graphics, grDevices, grid, magick, methods, showtext,
sysfonts, utils
ggplot2, graphics, grDevices, grid, gridGraphics, magick,
methods, showtext, sysfonts, utils
sysfonts, grid, png, jpeg, Cairo, ggplot2, cowplot, magrittr,
dplyr, purrr
sysfonts, grid, png, jpeg, Cairo, ggplot2, cowplot, magrittr,
purrr
sysfonts, grid, png, jpeg, Cairo, ggplot2, cowplot, magrittr,
purrr, shiny, shinycssloaders, shinyBS, colourpicker
urca, fracdiff, LongMemoryTS, sandwich, strucchange, longmemo,
stats
bookdown, distill, rmarkdown, rmdformats, usethis
ggplot2, ranger, cowplot, viridis, viridisLite, zoo, stringr,
HH, tidyr
shiny, ggplot2, survival, survminer, ggfortify, DescTools,
gridExtra, reshape, pastecs, RVAideMemoire, xtable, ROCR,
plotROC, psych, stargazer, Rmisc, mixOmics
DescTools, ROCR, Rmisc, ggplot2, ggfortify, gridExtra,
pastecs, plotROC, psych, reshape, stargazer, shiny, survminer,
survival, xtable, spls, pls
methods, stats, utils, sandwich, Matrix, lme4, nonnest2
mvtnorm, DT, shiny, plyr, abind, ggplot2
mvtnorm, DT, shiny, abind, ggplot2, blme, broom
mvtnorm, DT, shiny, abind, ggplot2, blme, broom, foreach
dplyr, mvtnorm, foreach, shiny, abind, ggplot2, blme, broom,
dplyr, mvtnorm, foreach, shiny, abind, ggplot2, blme,
broom.mixed,
statmod, stats, survival, randtoolbox, MASS
MASS, randtoolbox, statmod, stats, survival, tools
Rcpp (>= 1.0.5), stats, dplyr, glue, rlang, magrittr
Rcpp (>= 1.0.5), stats, dplyr, glue, rlang, magrittr, FNN
covr, stringr, purrr, lubridate, tibble, dplyr
stringr, purrr, lubridate, tibble, dplyr
stringr, purrr, lubridate, tibble, dplyr, skimr
checkmate, data.table, digest, fields, Formula, formula.tools,
ggplot2 (>= 3.0.0), grid, gtable, lubridate, memoise, plyr,
scales, sp, stringr, purrr, RCurl, isoband
checkmate, data.table, digest, fields, Formula, formula.tools,
ggplot2 (>= 3.0.0), grid, gtable, memoise, plyr, scales, sp,
stringr, purrr, RCurl, isoband, lubridate
checkmate, data.table, digest, Formula, formula.tools, ggplot2
(>= 3.0.0), grid, gtable, memoise, plyr, scales, sp, stringr,
purrr, isoband, lubridate
checkmate, curl, data.table, digest, dplyr, fields, Formula,
formula.tools, ggplot2, grid, gridExtra, gtable, lubridate,
maps, maptools, Matrix, memoise, plyr, RCurl, scales, sp,
stringr
checkmate, curl, data.table, digest, dplyr, fields, Formula,
formula.tools, ggplot2 (>= 3.0.0), grid, gridExtra, gtable,
lubridate, maps, maptools, Matrix, memoise, plyr, RCurl,
scales, sp, stringr
checkmate, curl, data.table, digest, dplyr, fields, Formula,
formula.tools, ggplot2 (>= 3.0.0), grid, gridExtra, gtable,
lubridate, maps, maptools, Matrix, memoise, plyr, RCurl,
scales, sp, stringr, purrr
checkmate, data.table, digest, fields, Formula, formula.tools,
ggplot2 (>= 3.0.0), grid, gtable, lubridate, memoise, plyr,
scales, sp, stringr, purrr
checkmate, data.table, digest, fields, Formula, formula.tools,
ggplot2 (>= 3.0.0), grid, gtable, lubridate, memoise, plyr,
scales, sp, stringr, purrr, RCurl
geosphere, RColorBrewer, plotly, leaflet, ggmap, rjson
geosphere, RColorBrewer, plotly, leaflet, ggmap, rjson, sp,
grDevices, plyr, RCurl, utils, tools
geosphere, RColorBrewer, leaflet, grDevices, plyr, RCurl,
utils
geosphere, matlab, leaflet, grDevices, plyr, RCurl, utils
grid, metafor (>= 2.1-0), lme4, CompQuadForm
metafor (>= 2.1-0), grid, lme4, CompQuadForm
metafor (>= 2.1-0), grid, lme4, CompQuadForm, xml2
metafor (>= 3.0-0), grid, lme4, CompQuadForm, xml2
mvtnorm, logspline, coda, runjags, LaplacesDemon
mvtnorm, logspline, coda, LaplacesDemon, rstan (>= 2.18.1),
rstantools (>= 1.5.1), bridgesampling
bridgesampling, coda, LaplacesDemon, logspline, mvtnorm,
RcppParallel (>= 5.0.1), rstan (>= 2.18.1), rstantools (>=
2.1.1)
factoextra, cluster, dbscan, dplyr, seqinr, Biostrings
caret, ggplot2, graphics, e1071, gbm, randomForest
data.table (>= 1.9.2), Matrix, gtools, Rmpi, ggplot2
mvmeta, meta, survival, survRM2, graphics
Matrix, MASS, ellipse, graphics, stats, utils
Matrix, MASS, ellipse, graphics, stats, utils, mvtnorm
Matrix, MASS, ellipse, graphics, stats, utils, mvtnorm,
numDeriv, lavaan
dplyr, fs, magrittr, piggyback, purrr, readr, rlang, stringr,
tibble, yaml
utils, stats, methods, parallel, grDevices, graphics, Matrix
utils, stats, methods, parallel, grDevices, graphics, Matrix,
sys
utils, stats, methods, parallel, grDevices, graphics, Matrix,
AnnotationDbi (>= 1.32.3)
utils, stats, methods, parallel, grDevices, graphics, Matrix,
AnnotationDbi (>= 1.32.3), GO.db (>= 3.2.2)
tibble, magrittr, usethis, dplyr (>= 1.0.0), ggplot2 (>=
3.2.1), ggfittext, cli (>= 2.0.1), forcats, ggimage, patchwork
(>= 1.0.0), scales, stringr, tidyr (>= 1.0.2), purrr, meta (>=
4.11-0), glue, rmarkdown
ggplot2, data.table, plotROC, utils, stats
stringr, ggplot2, igraph, scales, grid, taxize, seqinr,
reshape2, zoo, traits, RColorBrewer, RCurl, ape, reshape,
stats, grDevices, utils, lazyeval, dplyr, magrittr, readr
stringr, ggplot2, igraph, scales, grid, taxize, seqinr,
reshape2, zoo, traits, RColorBrewer, RCurl, ape, reshape,
stats, grDevices, utils, lazyeval, dplyr, magrittr, readr,
rlang, biomformat, phylotate, ggfittext, vegan, ggrepel,
cowplot, GA, Rcpp
stringr, ggplot2, igraph, scales, grid, taxize, seqinr,
reshape2, zoo, traits, RColorBrewer, RCurl, ape, reshape,
stats, grDevices, utils, lazyeval, dplyr, magrittr, readr,
rlang, biomformat, phylotate, ggfittext, vegan, ggrepel,
cowplot, GA, Rcpp, crayon
stringr, ggplot2, igraph, scales, grid, taxize, seqinr,
reshape2, zoo, traits, RColorBrewer, RCurl, ape, stats,
grDevices, utils, lazyeval, dplyr, magrittr, readr, rlang,
biomformat, phylotate, ggfittext, vegan, cowplot, GA, Rcpp,
crayon, phyloseq
stringr, ggplot2, igraph, scales, grid, taxize, seqinr,
reshape2, zoo, traits, RColorBrewer, RCurl, ape, reshape,
stats, grDevices, utils, lazyeval, dplyr, magrittr, readr,
rlang, biomformat, phylotate, ggfittext, vegan, ggrepel,
cowplot, GA, Rcpp, crayon, svglite, phyloseq
stringr, ggplot2, igraph, scales, grid, taxize, seqinr,
reshape2, zoo, traits, RColorBrewer, RCurl, ape, reshape,
stats, grDevices, utils, lazyeval, dplyr, magrittr, readr,
rlang, biomformat, phylotate, ggfittext, vegan, ggrepel,
cowplot, GA, Rcpp, crayon, svglite, phyloseq, viridisLite
stringr, ggplot2, igraph, scales, grid, taxize, seqinr,
reshape2, zoo, traits, RColorBrewer, RCurl, ape, reshape,
stats, grDevices, utils, lazyeval, dplyr, magrittr, readr,
rlang, biomformat, phylotate, ggfittext, vegan, ggrepel,
cowplot, GA, Rcpp, crayon, svglite, phyloseq, viridisLite,
tibble
stringr, ggplot2, igraph, scales, grid, taxize, seqinr,
reshape2, zoo, traits, RColorBrewer, RCurl, ape, reshape,
stats, grDevices, utils, lazyeval, dplyr, magrittr, readr,
rlang, biomformat, phylotate, ggfittext, vegan, ggrepel,
cowplot, GA, Rcpp, crayon, svglite, viridisLite, tibble
stringr, ggplot2, igraph, grid, taxize, seqinr, RCurl, ape,
stats, grDevices, utils, lazyeval, dplyr, magrittr, readr,
rlang, ggfittext, vegan, cowplot, GA, Rcpp, crayon, tibble, R6
dplyr (>= 1.0.0), ellipsis, forcats, ggplot2 (>= 3.3.1), glue,
magrittr, purrr, rlang (>= 0.1.2), shiny, stringr, tibble,
tidyr (>= 1.0.0), tidyselect
dplyr (>= 1.0.0), forcats, ggplot2 (>= 3.3.1), magrittr,
purrr, rlang (>= 0.1.2), shiny, stringr, tibble, tidyr (>=
1.0.0), tidyselect
R6, tidyr, dplyr, stringr, magrittr, XML, purrr, readxl,
rlang, tibble, tidyselect
R6, tidyr, dplyr, stringr, magrittr, xml2, purrr, readxl,
rlang, tibble, tidyselect
Rcpp (>= 0.11.2), plyr, colorspace, MASS
stats, utils, graphics, grDevices, methods
stats, utils, graphics, grDevices, nlme, mathjaxr, pbapply
dplyr, furrr, ggplot2, knitr, metafor, metap, purrr, rlang,
stringr, tibble, tidyr, viridis
dplyr, furrr, ggplot2, knitr, metafor, metap, purrr, rlang,
stringr, tidyr, viridis
dplyr, furrr, ggplot2, knitr, metafor, metap, purrr, rlang,
stringr, tidyr
Matrix, MASS, metafor (>= 1.9-9), stringr
MASS, lhs, plyr, BBmisc, ParamHelpers, BatchJobs,
BatchExperiments, ggplot2, metafor
utils, methods, stats, reshape2, ggplot2, preprocomb (>=
0.3.0), doParallel, foreach
dataone, dplyr, EML, emld, lubridate, purrr, readr, stats,
stringr, tibble, tidyr, rlang
meta, lme4, gdata, matrixStats, plyr, dplyr, tidyr, ggplot2,
gridExtra, RColorBrewer, lmerTest, mgcv, reshape2, caret,
randomForest, grDevices, gplots, magrittr, tools, foreign,
knitr, rmarkdown, zCompositions, compositions, RCurl, httr,
repmis, jsonlite
meta, lme4, gdata, plyr, dplyr, tidyr, ggplot2, gridExtra,
lmerTest, matrixStats, zCompositions, compositions
metafor (>= 2.0.0), mvtnorm, ellipse, lme4, plyr, ggplot2
metafor (>= 2.0.0), mvtnorm, lme4, plyr, methods, pROC,
ggplot2
metafor (>= 2.0.0), mvtnorm, lme4, dplyr, plyr, methods, pROC,
ggplot2
cowplot, dplyr (>= 1.0.0), GGally, ggforce, ggplot2 (>=
3.3.0), ggrepel, grid, lme4, lmerTest, magrittr, mathjaxr,
methods, progress, purrr, rlang (>= 0.1.2), tibble, tidyr,
tidyselect (>= 1.0.0)
dplyr (>= 1.0.0), GGally, ggforce, ggplot2 (>= 3.3.0),
ggrepel, grid, lme4, lmerTest, magrittr, mathjaxr, methods,
patchwork, progress, purrr, rlang (>= 0.1.2), tibble, tidyr,
tidyselect (>= 1.0.0)
dplyr (>= 1.0.0), GGally, ggforce, ggplot2 (>= 3.3.0),
ggrepel, lme4, lmerTest, magrittr, mathjaxr, methods,
patchwork, purrr, rlang (>= 0.1.2), tibble, tidyr, tidyselect
(>= 1.0.0)
dplyr (>= 1.0.0), GGally, ggforce, ggplot2 (>= 3.3.0),
ggrepel, lme4, lmerTest, magrittr, mathjaxr, methods,
patchwork, purrr, rlang (>= 0.4.11), tibble, tidyr, tidyselect
(>= 1.0.0)
ade4, dendextend, cowplot, dplyr, FWDselect, GGally, ggforce,
ggplot2, ggrepel, gplots, grid, lattice, lme4, lmerTest,
magrittr, methods, progress, rlang, tibble, tidyr, tidyselect
ade4, dendextend, cowplot, dplyr, FWDselect, GGally, ggforce,
ggplot2, ggrepel, grid, lattice, lme4, lmerTest, magrittr,
methods, progress, purrr, rlang, tibble, tidyr, tidyselect (>=
1.0.0)
ade4, dendextend, cowplot, dplyr, FWDselect, GGally, ggforce,
ggplot2, ggrepel, grid, lme4, lmerTest, magrittr, methods,
progress, purrr, rlang, tibble, tidyr, tidyselect (>= 1.0.0)
ade4, cowplot, dplyr, FWDselect, GGally, ggforce, ggplot2,
ggrepel, grid, lme4, lmerTest, magrittr, methods, progress,
purrr, rlang, tibble, tidyr, tidyselect (>= 1.0.0)
ade4, cowplot, dplyr, FWDselect, GGally, ggforce, ggplot2 (>=
3.3.0), ggrepel, grid, lme4, lmerTest, magrittr, methods,
progress, purrr, rlang, tibble, tidyr, tidyselect (>= 1.0.0)
ade4, cowplot, dplyr (>= 1.0.0), FWDselect, GGally, ggforce,
ggplot2 (>= 3.3.0), ggrepel, grid, lme4, lmerTest, magrittr,
methods, progress, purrr, rlang, tibble, tidyr, tidyselect (>=
1.0.0)
ade4, cowplot, dplyr (>= 1.0.0), FWDselect, GGally, ggforce,
ggplot2 (>= 3.3.0), ggrepel, grid, lme4, lmerTest, magrittr,
methods, progress, purrr, rlang (>= 0.1.2), tibble, tidyr,
tidyselect (>= 1.0.0)
lattice,Rdpack (>= 0.7),TFisher,mutoss,mathjaxr (>= 0.8-3)
lattice,Rdpack (>= 0.7),TFisher,mutoss,mathjaxr (>=
0.8-3),qqconf
Rcpp, ggplot2, methods, gridExtra, Formula
encode, lattice, magrittr, lazyeval, dplyr, fold,
encode, lattice, magrittr, lazyeval, dplyr (>= 0.7.1), fold,
rlang
encode, lattice, magrittr, lazyeval, dplyr (>= 0.7.1), fold,
rlang, ggplot2
encode (>= 0.3.2), lattice, magrittr, lazyeval, dplyr (>=
0.7.1), tidyr, fold, rlang, ggplot2
encode (>= 0.3.2), lattice, magrittr, dplyr (>= 0.7.1), tidyr,
rlang
encode (>= 0.3.2), lattice, magrittr, dplyr (>= 0.7.1), tidyr,
rlang, grid
encode (>= 0.3.4), lattice, magrittr, dplyr (>= 0.7.1), tidyr,
rlang, grid
encode (>= 0.3.4), lattice, magrittr, dplyr (>= 0.7.1), tidyr,
rlang, grid, gridExtra, gtable, ggplot2, scales
encode (>= 0.3.6), lattice, magrittr, dplyr (>= 0.7.1), tidyr,
rlang, grid, gridExtra, gtable, ggplot2, scales
bbmle, metafor, boot, methods, numDeriv, MASS, graphics,
stats, fastGHQuad, lme4
boot, methods, numDeriv, lme4, MASS, graphics, stats
bbmle, metafor, boot, methods, numDeriv, lme4, MASS, graphics,
stats, fastGHQuad
bbmle, metafor, boot, methods, numDeriv, MASS, graphics,
stats, fastGHQuad, lme4, Rfast, parallel, doParallel, foreach,
doRNG
ade4, dendextend, dplyr, ggforce, ggrepel, reshape2, stringr,
tidyverse
dplyr, metacore (>= 0.0.4), purrr, rlang, stringr, tidyr
dplyr, metacore (>= 0.0.4), purrr, rlang, stringr, tidyr,
tibble, magrittr
meta, powerSurvEpi, readxl, tcltk, withr, writexl, xtable
meta, pwr, powerSurvEpi, readxl, tcltk, withr, writexl, xtable
dplyr, forestmodel, magrittr, purrr, rlang (>= 0.1.2), stats
sp, spacetime, rgdal, gstat, raster, snowfall, plyr
methods, utils, stats, sp, spacetime, rgdal, gstat, raster,
snowfall, plyr
spdep, rgdal, ncdf4, ncdf4.helpers, methods, Rcpp (>= 0.11.0)
spdep, rgdal, ncdf4, ncdf4.helpers, curl, methods, Rcpp (>=
0.11.0)
spdep, rgdal, ncdf4, ncdf4.helpers, curl, methods, Rcpp (>=
0.12.12)
spdep, rgdal, ncdf4, ncdf4.helpers, httr, jsonlite, methods,
Rcpp (>= 0.12.12)
knitr, spdep, rgdal, ncdf4, ncdf4.helpers, httr, jsonlite,
methods, Rcpp (>= 0.12.12)
spdep, rgdal, ncdf4, httr, jsonlite, methods, Rcpp (>=
0.12.12)
sf, spdep, rgdal, ncdf4, httr, jsonlite, methods, meteospain,
Rcpp (>= 0.12.12), units, xml2
sf, spdep, rgdal, ncdf4, methods, meteospain, Rcpp (>=
0.12.12), units
assertthat, crayon, dplyr, glue, httr, jsonlite, lubridate,
magrittr, purrr, rlang, sf, stringr, tidyr, units, xml2, vctrs
assertthat, crayon, dplyr, glue, httr, jsonlite, lubridate,
magrittr, purrr, rlang, sf, stringr, tidyr, units, xml2, vctrs,
memoise, cachem
assertthat, crayon, dplyr, glue, httr, jsonlite, lubridate,
magrittr, purrr, rlang, sf, stringr, tidyr, units, xml2, vctrs,
memoise, cachem, curl
ggplot2, scales, stringr, tibble, lubridate, tidyr
methods, geiger, spacodiR, dplyr, picante, foreach,
doParallel, colorRamps
methods, geiger, spacodiR, dplyr, picante, foreach,
doParallel, colorRamps, MASS
methods, geiger, spacodiR, dplyr, picante, foreach,
doParallel, MASS, plotrix
stats, ggplot2, dplyr, rlang, tidyr, viridis, utils, DBI,
RSQLite, ggpp
stats, ggplot2, dplyr, rlang, tidyr, utils, DBI, RSQLite,
ggpp, minerva, energy
numDeriv, compiler, splines, prodlim, Rcpp (>= 0.9.2),
RcppArmadillo (>= 0.3.6)
lava (>= 1.2.3), numDeriv, compiler, splines, prodlim, Rcpp
(>= 0.9.2), RcppArmadillo (>= 0.3.6)
numDeriv, compiler, splines, Rcpp (>= 0.9.2), RcppArmadillo
(>= 0.3.6)
numDeriv, compiler, Rcpp, splines, survival
numDeriv, compiler, Rcpp, splines, survival (>= 2.43-1),
mvtnorm (>= 1.0-11), numDeriv, compiler, Rcpp, splines,
survival (>= 2.43-1),
mvtnorm, numDeriv, compiler, Rcpp, splines, survival (>=
2.43-1),
boot, evd, gmm, ismev, methods, nleqslv, numDeriv, Rcpp (>=
0.11.6), rootSolve, stats
boot, evd, gmm, ismev, methods, nleqslv, nloptr, numDeriv,
Rcpp (>= 0.11.6), rootSolve, stats, revdbayes
alabama, boot, evd, methods, nleqslv, nloptr (>= 1.2.0), Rcpp
(>= 0.12.16), stats, TruncatedNormal (>= 1.1)
alabama, evd, methods, nleqslv, nloptr (>= 1.2.0), Rcpp (>=
0.12.16), stats,
Rcpp, graphics, stats, numDeriv, zoo, maxLik
stats, splines, Matrix, matrixcalc, mgcv, face
Rcpp (>= 0.12.7), ggplot2 (>= 2.2.1), methods, pbapply, utils
Rcpp (>= 0.12.7), ggplot2 (>= 2.2.1), methods, lubridate,
GIGrvg, stochvol (>= 2.0.3), RcppParallel, dplyr, magrittr,
tibble
Rcpp (>= 0.12.7), ggplot2 (>= 3.3.0), methods, lubridate,
GIGrvg, stochvol (>= 2.0.3), RcppParallel, dplyr, magrittr,
tibble
Rcpp (>= 0.12.7), ggplot2 (>= 3.3.0), methods, lubridate,
GIGrvg, stochvol (>= 2.0.3), RcppParallel, dplyr, magrittr,
tibble, zoo
C50, class, e1071, infotheo, MASS, rpart, stats, utils
cluster, e1071, infotheo, MASS, rpart, rrcov, stats, utils
cluster, clusterCrit, e1071, infotheo, MASS, rpart, rrcov,
stats, utils
cluster, clusterCrit, ECoL(>= 0.3), e1071, infotheo, MASS,
rpart, rrcov, stats, utils
pracma, nsga2R, igraph, genalg, ggplot2, reshape2, Rfast
stats, MASS, abind, boot, energy, raster
shiny, matrixStats, viridis, colourpicker, miniUI, rstudioapi,
plotly, GGally, KernSmooth, data.table, dplyr, gridExtra,
mvnfast, plyr
matrixStats, viridis, GGally, KernSmooth, gridExtra, plyr,
shiny, miniUI
gamm4, matrixStats, viridis, GGally, KernSmooth, gridExtra,
plyr, shiny, miniUI
methods, stats, graphics, Matrix, splines, utils
stringr, grDevices, graphics, stats, utils, gplots, ggplot2,
dplyr, magrittr, gdata
corpcor, gridExtra, Matrix, methods, R.utils, reticulate,
stats
corpcor, ggplot2, ggrepel, gridExtra, Matrix, methods,
R.utils, reticulate (>= 1.25), rstudioapi
matrixcalc, glmnet, stringr, Hmisc, qgraph, gtools
spgwr, methods, doParallel, foreach, htmltools, nabor
ggplot2, sf, knitr, spgwr, methods, doParallel, foreach,
htmltools, nabor, qlcMatrix, mapview, microbenchmark, rlang
Formula, truncreg, maxLik, survival, Rdpack, prediction,
margins, generics, numDeriv
abind, car, foreign, lme4 (>= 0.999999-2), MASS, Matrix (>=
1.0), methods, nnet, stats, R2WinBUGS
abind, car, foreign, lme4 (>= 0.999999-2), MASS, Matrix (>=
1.0), methods, nnet, stats, R2WinBUGS, nlme
DAPAR, emmeans, foreach, imp4p, impute, limma, mice, stringr
emmeans, foreach, imp4p, impute, limma, mice, stringr
MASS, nleqslv, survival, compiler, distr
Matrix, stats, Rcpp, CORElearn, RSpectra,
stats, systemfit (>= 1.1-12), miscTools (>= 0.6-0)
miscTools (>= 0.6-1), systemfit (>= 1.0-0), MASS
lattice, MASS, nnet, randomForest, rpart
lattice, grDevices, graphics, MASS, nnet, rpart, splines,
stats, survival, utils
lattice, grDevices, graphics, MASS, nnet, rpart, splines,
stats, survival, utils, Rcpp
grDevices, graphics, MASS, nnet, rpart, splines, stats,
survival, utils, Rcpp
broom, dplyr, grDevices, graphics, MASS, mitml, nnet, Rcpp,
rlang, rpart, splines, stats, survival, utils
broom, dplyr, grDevices, graphics, MASS, mitml, nnet,
parallel, Rcpp, rlang, rpart, splines, stats, survival, utils
broom, dplyr, generics, graphics, lattice, methods, stats,
tidyr, utils, Rcpp
broom, dplyr, generics, graphics, lattice, methods, stats,
tidyr, utils
broom, dplyr, generics, graphics, lattice, methods, Rcpp,
stats, tidyr, utils
broom, dplyr, generics, graphics, lattice, methods, Rcpp,
rlang, stats, tidyr, utils
broom, dplyr, generics, graphics, grDevices, lattice, methods,
Rcpp, rlang, stats, tidyr, utils, withr
broom, dplyr, generics, graphics, grDevices, lattice, methods,
Rcpp, rlang, stats, tidyr, utils
broom, dplyr, graphics, lattice, methods, stats, tidyr, utils
methods, data.table, dplyr, magrittr, Rcpp (>= 0.12.12),
lifecycle
methods, data.table, dplyr, magrittr, Rcpp (>= 0.12.12),
UpSetR, ggplot2, tidyr, assertthat
stats, mvtnorm, pbivnorm, GJRM, sampleSelection
ranger, data.table, stats, FNN, ggplot2, gridExtra, crayon,
corrplot, ggpubr, DescTools, foreach
ranger, data.table, stats, FNN, ggplot2, crayon, corrplot,
ggpubr, DescTools, foreach
sirt (>= 0.42), lme4, MBESS, pls, mitools, bayesm, Rcpp (>=
0.11-0)
sirt (>= 0.42), lme4, MBESS, pls, mitools, bayesm, Rcpp (>=
0.11-0), inline
sirt (>= 0.42), lme4, MBESS, pls, mitools, bayesm, Rcpp (>=
0.11-0), inline, car, foreign
Rcpp, sirt, TAM, lme4, MBESS, pls, mitools, bayesm, inline,
car, foreign
Rcpp, sirt, TAM, lme4, MBESS, pls, mitools, bayesm, inline,
car, foreign, sjmisc, multiwayvcov
methods, stats, graphics, utils, Rcpp, TAM, lme4, inline, car,
foreign, sjmisc, multiwayvcov, grouped, MBESS, bayesm, sirt,
pls, mitools, MASS, mvtnorm
bayesm, car, foreign, graphics, grouped, Hmisc, inline, lme4,
MASS, MBESS, MCMCglmm, methods, mitools, multiwayvcov, mvtnorm,
pls, Rcpp, sirt, sjmisc, stats, TAM, utils
car, foreign, graphics, grouped, lme4, MASS, MCMCglmm,
methods, mitools, multiwayvcov, mvtnorm, Rcpp, sirt, sjmisc,
stats, TAM (>= 1.99), utils
blme, car, foreign, graphics, grouped, lme4, MASS, MCMCglmm,
methods, mitools, multiwayvcov, mvtnorm, Rcpp, sirt, sjmisc,
stats, TAM (>= 1.99), utils
CDM (>= 5.8-5), graphics, lme4, MASS, methods, mitools,
mvtnorm, Rcpp, sirt, stats, TAM (>= 2.9-13), utils
CDM (>= 5.8-5), coda, graphics, lme4, MASS, methods, mitools,
mvtnorm, Rcpp, sirt, stats, TAM (>= 2.9-13), utils
CDM (>= 5.8-5), coda, graphics, lme4, MASS, methods, mitools,
mvtnorm, Rcpp, sirt, stats, TAM, utils
blme, car, CDM, foreign, graphics, grouped, lme4, MASS,
MCMCglmm, methods, mitools, multiwayvcov, mvtnorm, Rcpp, sirt,
sjmisc, stats, TAM, utils
blme, car, CDM, foreign, graphics, grouped, lme4, MASS,
MCMCglmm, methods, mitools, multiwayvcov, mvtnorm, Rcpp, sirt,
sjlabelled, stats, TAM, utils
CDM (>= 5.8-5), graphics, lme4, methods, mitools, mvtnorm,
Rcpp, sirt, stats, TAM (>= 2.5-5), utils
CDM (>= 5.8-5), graphics, lme4, MASS, methods, mitools,
mvtnorm, Rcpp, sirt, stats, TAM (>= 2.5-5), utils
graphics, methods, mitools, Rcpp, stats, utils
CDM, graphics, lme4, methods, mitools, Rcpp, sirt, stats, TAM,
utils
Matrix, graphics, utils, stats, MASS, parallel, nlme, lme4,
mvmeta (>= 0.4.7), jomo (>= 2.3-1), mvtnorm, digest, abind
Matrix, graphics, utils, stats, MASS, parallel, nlme, lme4,
mvmeta (>= 0.4.7), jomo (>= 2.4-1), mvtnorm, digest, abind
Matrix, graphics, utils, stats, MASS, parallel, nlme, lme4,
mvmeta (>= 0.4.7), jomo (>= 2.6-3), mvtnorm, digest, abind
doBy, combinat, flexclust, graphics, irr, matrixStats, stats,
utils
crayon, fmsb, future, future.apply, ggplot2, ggside,
progressr, reshape2, stats, stringr
dplyr, plyr, magrittr, broom, phyloseq, vegan, rlang, tools,
ggplot2, ggpubr, DESeq2, dada2, SummarizedExperiment,
S4Vectors, Biostrings, rstatix, tidyr, DECIPHER, phangorn,
MASS, randomForest, edgeR, knitr
dplyr, plyr, magrittr, broom, phyloseq, vegan, rlang, ggplot2,
ggpubr, DESeq2, dada2, SummarizedExperiment, S4Vectors,
Biostrings, rstatix, tidyr, DECIPHER, phangorn, MASS,
randomForest, edgeR, testthat
dplyr, plyr, magrittr, broom, phyloseq, vegan, rlang, ggplot2,
ggpubr, DESeq2, SummarizedExperiment, S4Vectors, rstatix,
tidyr, phangorn, randomForest, edgeR, testthat
crul (>= 0.2.0), jsonlite (>= 1.2), data.table, tibble
crul (>= 0.4.0), jsonlite (>= 1.5), data.table, tibble
crul (>= 0.5.2), jsonlite (>= 1.5), data.table, tibble
crul (>= 0.5.2), jsonlite (>= 1.5), data.table, tibble,
httpcode (>= 0.2.0)
R6, stats, ape, vegan, rlang, data.table, magrittr, dplyr,
tibble, scales, grid, ggplot2, RColorBrewer, reshape2
R6, stats, ape, vegan, rlang, data.table, magrittr, dplyr,
tibble, reshape2, scales, grid, ggplot2, boot, agricolae, VGAM,
GUniFrac, picante, randomForest, MASS, RColorBrewer, pheatmap,
ggpubr, gridExtra, ggrepel, ggdendro, Rcpp
R6, stats, ape, vegan, rlang, data.table, magrittr, dplyr,
tibble, reshape2, scales, grid, ggplot2, VGAM, MASS,
RColorBrewer
R6, stats, ape, vegan, rlang, data.table, magrittr, dplyr,
tibble, scales, grid, ggplot2, RColorBrewer
ggplot2, grid, maptools, RColorBrewer, rgdal
graphics, RColorBrewer, grDevices, stats, stringr, labeling,
utils
graphics, grDevices, labeling, RColorBrewer, stats, stringr,
utils
utils, methods, tools, graphics, grDevices, stringr, sp,
rgdal, rgeos, maptools, spdep, sf, stats, RColorBrewer,
labeling, readxl, writexl, rmapshaper, cleangeo, pbapply
utils, methods, tools, graphics, grDevices, stats,
RColorBrewer, stringr, labeling, readxl, writexl, sp, rgdal,
rgeos, sf, maptools, spdep, rmapshaper, cleangeo, pbapply
Hmisc, HH, lattice, grid, ReporteRs, ggplot2, htmltools
Hmisc (>= 4.1-1), HH, lattice, grid, ReporteRs, ggplot2,
htmltools, cowplot
Hmisc (>= 4.1-1), HH, lattice, grid, flextable, ggplot2,
htmltools, cowplot
Hmisc (>= 4.1-1), HH, lattice, grid, flextable, officer,
ggplot2, htmltools, cowplot
Hmisc (>= 4.1-1), HH, lattice, grid, flextable (>= 0.5-11),
officer, ggplot2, htmltools, cowplot
abind, deSolve, devtools, ggplot2, gridExtra, gtools, knitr,
MASS, matrixStats, matrixcalc, methods, parallel, plyr, readr,
reshape2, shiny, stats, stringr, utils
abind, deSolve, devtools, ggplot2, gridExtra, gtools, knitr,
MASS, matrixStats, matrixcalc, methods, parallel, plyr, readr,
reshape2, Rcpp, shiny, stats, stringr, utils
config, desc, dplyr, fs, glue, purrr, withr
boot, survey, MASS, stats, utils, kernlab, LowRankQP, nleqslv,
pracma
boot, survey, MASS, stats, utils, kernlab, LowRankQP, nleqslv,
pracma, parallel
boot, survey, kernlab, LowRankQP, nleqslv, stats, parallel,
utils, pracma
graphics, stats, mcGlobaloptim, methods, lubridate
doRNG, doParallel, foreach, graphics, randtoolbox, snow,
methods, lubridate, stats
foreach, graphics, mcGlobaloptim, methods, lubridate, stats
doRNG, doParallel, foreach, graphics, mcGlobaloptim, methods,
lubridate, stats
MASS, numDeriv, Matrix, forecast, stats, graphics, utils
MASS, numDeriv, Matrix, forecast, zoo, stats, graphics, utils,
Formula, texreg, methods
stats, utils, graphics, grDevices, SMR, WriteXLS, xtable
stats, utils, graphics, grDevices, SMR, writexl, xtable,
gWidgets (>= 0.0-54), gWidgetsRGtk2, pacman
stats, utils, graphics, grDevices, SMR, writexl, xtable,
tcltk, tkrplot
stats, utils, graphics, grDevices, SMR, writexl, xtable, tcltk
mlr3misc (>= 0.5.0), checkmate (>= 1.9.0), R6, bbotk (>=
0.3.0.900), data.table, matrixStats, lgr
mipfp, dplyr, purrr, tidyr, stringr, magrittr, stats, utils
dplyr, purrr, tidyr, stringr, magrittr, stats, tibble, utils
dplyr, purrr, tidyr, stringr, magrittr, stats, tibble,
forcats, ggplot2, utils, matrixStats, migration.indices
dplyr, purrr, tidyr, stringr, magrittr, stats, tibble,
forcats, utils, matrixStats, migration.indices, circlize,
graphics, grDevices
dplyr, purrr, tidyr, stringr, magrittr, stats, tibble,
forcats, utils, matrixStats, migration.indices, circlize,
graphics, grDevices, mipfp
dplyr, generics, ggforce, ggplot2, ggraph, igraph, network,
future, furrr, patchwork, pillar, purrr, rlang, sna, tidygraph,
tidyr
BiocManager, dplyr, generics, ggforce, ggplot2, ggraph,
igraph, methods, network, future, furrr, patchwork, pillar,
purrr, rlang, sna, tidygraph, tidyr
igraph, tidygraph, ggplot2, ggraph, R6, magrittr, rlang,
dplyr, purrr, tibble, tidyr, network
igraph, tidygraph, ggplot2, magrittr, rlang, dplyr, purrr,
tibble, tidyr, network, httr, jsonlite, lubridate, stringr
igraph, tidygraph, ggraph, ggplot2, magrittr, rlang, dplyr,
purrr, tibble, tidyr, network, httr, jsonlite, lubridate,
stringr, gridExtra
dplyr, ggdendro, ggraph, ggplot2, gridExtra, igraph, knitr,
magrittr, network, purrr, RColorBrewer, readxl, rlang,
rmarkdown, sna, stringr, tibble, tidygraph, tidyr
dplyr, ggdendro, ggraph, ggplot2, gridExtra, igraph, magrittr,
network, oaqc, purrr, RColorBrewer, rlang, sna, stringr,
tibble, tidygraph, tidyr, concaveman, ggforce, readxl
dplyr, ggdendro, ggraph, ggplot2, gridExtra, igraph, magrittr,
network, purrr, RColorBrewer, readxl, rlang, sna, stringr,
tibble, tidygraph, tidyr
dplyr, ggdendro, ggraph, ggplot2, gridExtra, igraph, magrittr,
network, purrr, RColorBrewer, readxl, rlang, sna, stringr,
tibble, tidygraph, tidyr, concaveman, ggforce
concaveman, dplyr, generics, ggdendro, ggforce, ggplot2,
ggraph, igraph, network, oaqc, future, furrr, patchwork, purrr,
rlang, sna, stringr, tibble, tidygraph, tidyr
dplyr (>= 1.0.7), tidyr (>= 1.1.0), tibble (>= 3.0.1), rlang,
utils, magrittr
Rcpp (>= 1.0), lubridate (>= 1.7), stringr (>= 1.4), dplyr (>=
0.8), methods, parallel, futile.logger
MASS,igraph, methods, plotrix, bnlearn, Rcpp, ppcor
MASS, igraph, bnlearn, ppcor, stats, Rcpp
MASS, igraph, ppcor, scales, stats, Rcpp
caret, dplyr, e1071, glmnet, kernlab, MLmetrics, randomForest,
rlang, stats, utils, xgboost
caret, dplyr, e1071, glmnet, kernlab, MLmetrics, randomForest,
rlang, rpart, stats, utils, xgboost
dplyr, e1071, kernlab, magrittr, mvtnorm, pillar, pROC, purrr,
rlang, stats, tibble, tidyr, utils
assertthat, pipeR (>= 0.5), numDeriv, purrr (>= 0.2.0), Rcpp
(>= 0.12.0), utils
assertthat, pipeR (>= 0.5), numDeriv, purrr (>= 0.2.0), Rcpp
(>= 0.12.0), glmnet, utils
utils, pipeR (>= 0.5), numDeriv, glmnet, Rcpp (>= 0.12.0),
RcppParallel
glmnet, softImpute, stats, ade4, FactoMineR, parallel,
doParallel, foreach, data.table
glmnet, softImpute, stats, FactoMineR, parallel, doParallel,
foreach, data.table, rARPACK
dplyr, magrittr, lubridate, openxlsx, utils
crul, data.table, digest, jsonlite, memoise, xts
graphics, httr, magrittr, methods, stats, tools, utils, XML,
igraph
graphics, httr, methods, stats, tools, utils, XML, igraph,
graphics, httr, methods, stats, tools, utils, XML, igraph,
assertthat
graphics, httr, methods, stats, tools, utils, igraph,
assertthat (>= 0.2.0)
tools, XML, httr, methods, utils, graphics, stats
shiny, shinyjs, shinyWidgets, colourpicker, rhandsontable,
metafor, markdown, WriteXLS, readxl, jsonlite, grDevices,
methods, stats
shiny (>= 0.13), htmltools (>= 0.3), utils
htmltools, katex, knitr, mime, rmarkdown, sass, xfun
Rcpp (>= 0.12.4), randtoolbox, DiceDesign, MaxPro, doParallel,
gtools, nloptr, foreach
Rcpp (>= 0.12.4), randtoolbox, DiceDesign, MaxPro, doParallel,
doSNOW, gtools, nloptr, foreach
Rcpp (>= 0.12.4), randtoolbox, DiceDesign, MaxPro, doParallel,
doSNOW, gtools, nloptr, foreach, jpeg
Rcpp (>= 0.12.4), randtoolbox, DiceDesign, MaxPro, doParallel,
doSNOW, gtools, nloptr, foreach, jpeg, gmp, conf.design, pdist,
DoE.base, FrF2
Rcpp (>= 0.12.4), randtoolbox, DiceDesign, MaxPro, doParallel,
doSNOW, gtools, nloptr, foreach, jpeg, gmp, conf.design, pdist,
DoE.base, FrF2, geometry
ggplot2, stringr, tidyr, shinyWidgets, data.table, readxl,
shiny.i18n (>= 0.2.0), showtextdb, shinyalert, readr, showtext,
shiny (>= 1.5.0), reshape, rlang, dplyr, reshape2
lattice, psych, MASS, GPArotation, mvtnorm, Matrix
stats4, psych, GPArotation, mvtnorm, Rcpp, plink, Matrix
stats4, psych, GPArotation, mvtnorm, Rcpp, Matrix
stats4, psych, GPArotation, mvtnorm, Rcpp, numDeriv, Matrix
stats4, GPArotation, mvtnorm, Rcpp, numDeriv
MASS, GPArotation, mvtnorm, Rcpp, numDeriv
GPArotation, Rcpp, sfsmisc, mgcv, numDeriv
GPArotation, Rcpp, sfsmisc, mgcv, splines, numDeriv
GPArotation, Rcpp, mgcv, vegan, Deriv, splines
GPArotation, Rcpp, mgcv, vegan, Deriv, splines, dcurver
GPArotation, Matrix, Rcpp, mgcv, vegan, Deriv, splines,
dcurver
GPArotation, gridExtra, Matrix, Rcpp, mgcv, vegan, Deriv,
splines, dcurver
GPArotation, gridExtra, Matrix, Rcpp, mgcv, vegan, Deriv,
splines, pbapply (>= 1.3-0), dcurver
lattice, stats, Rcpp, methods, markdown, pbapply, lpSolve
mvtnorm, stats, MASS, mice, norm, methods
stats, Matrix, MASS, ucminf, numDeriv, bigmemory, foreach,
mlogit
parallel, data.table, gridExtra, Rcpp (>= 0.11.1), xtable
ggplot2, gridExtra, parallel, Rcpp (>= 0.11.1), xtable
data.table, devtools, ggplot2, gridExtra, parallel, Rcpp (>=
0.11.1), stats, xtable
forrel, pedtools, plotly, dplyr, highcharter
forrel, pedtools, plotly, dplyr, highcharter, tidyr
forrel, pedtools, plotly, dplyr, highcharter, tidyr,
DirichletReg, stats
forrel, pedtools, plotly, dplyr, highcharter, tidyverse,
tidyr, DirichletReg, stats
forrel, pedtools, plotly, dplyr, highcharter, tidyr,
tidyverse, DirichletReg, stats
forrel, pedtools, plotly, dplyr, highcharter, tidyr,
tidyverse, DirichletReg, stats, purrr
Amelia, data.table, dplyr, ggdendro, ggplot2, Hmisc, ltm,
magrittr, MASS, Matrix, mi, mice, missForest, missMDA,
pcaMethods, plyr, rlang, stats, utils, tidyr, VIM
Rcpp, methods, ape, igraph, nloptr, corrplot, R6, magrittr
Rcpp, methods, ape, igraph, nloptr, ggplot2, corrplot, R6,
magrittr
Rcpp, methods, ape, igraph, nloptr, ggplot2, corrplot, R6,
rlang, sbm, magrittr
Rcpp, methods, igraph, nloptr (>= 1.2.0), ggplot2,
future.apply, R6, rlang, sbm, magrittr, Matrix
Rcpp, methods, igraph, nloptr, ggplot2, future.apply, R6,
rlang, sbm, magrittr, Matrix, RSpectra
mcmcplots, ggmcmc, ggthemes, BCEA, ggplot2, grid, gridExtra,
methods, R2jags, loo, coda, mcmcr
mcmcplots, ggmcmc, ggthemes, BCEA, ggplot2, grid, gridExtra,
bayesplot, methods, R2jags, loo, coda, mcmcr
mcmcplots, ggpubr, ggmcmc, ggthemes, BCEA, ggplot2, grid,
gridExtra, bayesplot, methods, R2jags, loo, coda, mcmcr
DiceKriging, e1071, kernlab, Matrix, mvtnorm, rgenoud
e1071, Matrix, mvtnorm, ggplot2, doParallel, foreach,
iterators, DiceKriging, emoa, quadprog
e1071, Matrix, mvtnorm, ggplot2, doParallel, foreach,
iterators, DiceKriging, emoa, quadprog, Rcpp
ggplot2, haven, lavaan, lme4, nlme, norm, r2mlm, readxl,
writexl
pan, haven, grDevices, graphics, stats, utils
pan, jomo, haven, grDevices, graphics, stats, utils
pan, jomo, haven, grDevices, graphics, stats, methods, utils
visNetwork, dplyr, plyr, tidyr, xml2, rvest, jsonlite,
RJSONIO, stringr, httr, yaml, rlang
dplyr, plyr, tidyr, xml2, rvest, jsonlite, RJSONIO, stringr,
httr, yaml, rlang
dplyr, plyr, tidyr, xml2, rvest, jsonlite, RJSONIO, stringr,
httr, yaml, rlang, igraph
rlang, plyr, dplyr, igraph, stringr, jsonlite, RJSONIO, tidyr
splines, fastGHQuad, mnormt, parallel, coda
splines, lme4 (>= 1.0), fastGHQuad, mnormt, parallel
graphics, stats, splines, fastGHQuad, mnormt, parallel, coda
graphics, stats, methods, splines, fastGHQuad, mnormt,
parallel, coda
stats, graphics, utils, stats4, BB, combinat, timeDate,
fGarch, Rdpack (>= 0.7), gbutils (>= 0.3-1), MCMCpack, e1071,
permute, mvtnorm
cluster, boot, expm, matrixcalc, Rsolnp, kdensity
stats (>= 3.3),utils (>= 3.2.3), stringr, ggplot2
stats (>= 3.3), utils(>= 3.6.2),ggplot2, data.table, dplyr
stats (>= 3.3), utils(>= 3.6.1), data.table
phyloseq, corrplot, psych, quadprog, LDRTools
vegan, phyloseq, corrplot, psych, quadprog, LDRTools, Matrix,
methods
vegan, phyloseq, corrplot, psych, quadprog, LDRTools, Matrix,
methods, markdown
igraph, rgl, ellipse, corpcor, RColorBrewer, plyr,parallel,
dplyr, tidyr, reshape2, methods
igraph, rgl, ellipse, corpcor, RColorBrewer, plyr,parallel,
dplyr, tidyr, reshape2, methods, matrixStats, rARPACK,
gridExtra
igraph, rgl, ellipse, corpcor, RColorBrewer, parallel, dplyr,
tidyr, reshape2, methods, matrixStats, rARPACK, gridExtra
ggplot2 (>= 2.1.0), graphics, Rcpp (>= 0.12.8), stats
ggplot2 (>= 3.3.3), graphics, Rcpp (>= 1.0.6), stats
graphics, minpack.lm, nloptr, stats, zoo, tmvtnorm
Rcpp, pcaPP, Matrix, fMultivar, mnormt, irlba, chebpol
Rcpp, pcaPP, Matrix, fMultivar, mnormt, irlba
Rcpp, pcaPP, Matrix, fMultivar, mnormt, irlba, latentcor (>=
2.0.1)
Rcpp (>= 0.12.11), RcppProgress (>= 0.1), fda, methods
data.table, ggplot2, Matrix, mice, Rfast, rlang, scales,
stats, tidyr, utils, xgboost
foreach, GA (>= 3.1), mclust (>= 5.4), memoise, network, Rcpp
scran, Seurat, Matrix, methods, SingleCellExperiment, scuttle
maxLik, numDeriv, randtoolbox, Rcpp (>= 0.12.19), readr,
sandwich, stats, stringr (>= 1.3.1)
stats, readr, stringr (>= 1.3.1), maxLik, numDeriv, Rcpp (>=
0.12.19), randtoolbox, sandwich
Rcpp (>= 0.11.5), mvtnorm, methods, stats
pbapply, Formula, Rfast, dplyr, gamlss.dist, generics,
ggplot2, gridExtra, lmtest, magrittr, statmod, tibble, rlang,
ggrepel, gamlss
kernlab, MASS, segmented, stats, survival
dplyr, ggplot2, rlang, tidyr, RColorBrewer
ggplot2, grid, methods, plyr, Rcpp, reshape2
deSolve, ggplot2, grid, methods, plyr, progress, Rcpp,
reshape2
assertthat, deSolve, dplyr, ggplot2, grid, methods, plotly,
plyr, progress, Rcpp, reshape2,
assertthat, deSolve, dplyr, ggplot2, grid, methods, plotly,
plyr, progress, Rcpp, reshape2, lifecycle
assertthat, deSolve, dplyr, ggplot2, ggrepel, grid, lubridate,
methods, plotly, plyr, progress, Rcpp, reshape2, rlang,
lifecycle
stats, graphics, methods, FME, deSolve, R6
stats, graphics, methods, FME, deSolve, R6, minpack.lm,
rootSolve, inline, parallel
stats, graphics, methods, FME, deSolve, R6, minpack.lm,
rootSolve, inline, parallel, plyr
stats, graphics, methods, deSolve, R6, inline, parallel,
numDeriv, lmtest, pkgbuild, nlme, purrr
stats, graphics, methods, deSolve, R6, inline, parallel, plyr,
numDeriv
stats, graphics, methods, deSolve, R6, inline, parallel,
numDeriv, lmtest
stats, graphics, methods, deSolve, R6, inline, parallel,
numDeriv, lmtest, pkgbuild
stats, graphics, methods, deSolve, R6, inline, parallel,
numDeriv, lmtest, pkgbuild, nlme (>= 3.1-149), purrr
stats, graphics, methods, deSolve, R6, inline (>= 0.3.17),
numDeriv, lmtest, pkgbuild, nlme (>= 3.1-151), purrr
stats, graphics, methods, deSolve, R6, inline (>= 0.3.19),
numDeriv, lmtest, pkgbuild, nlme (>= 3.1-151), purrr, saemix
(>= 3.0)
stats, graphics, methods, parallel, deSolve, R6, inline (>=
0.3.19), numDeriv, lmtest, pkgbuild, nlme (>= 3.1-151), saemix
(>= 3.1), rlang, vctrs
lme4, arm, qgraph, dplyr, clusterGeneration, mvtnorm, corpcor,
plyr, abind, methods
lme4, arm, qgraph, dplyr, clusterGeneration, mvtnorm, corpcor,
plyr, abind, methods, parallel
lme4, arm, qgraph, dplyr, clusterGeneration, mvtnorm, corpcor,
plyr, abind, methods, parallel, MplusAutomation, graphicalVAR
lme4, arm, qgraph, dplyr (>= 0.5.0), clusterGeneration,
mvtnorm, corpcor, plyr, abind, methods, parallel,
MplusAutomation, graphicalVAR
lme4, arm, qgraph, dplyr, clusterGeneration, mvtnorm, corpcor,
plyr, abind, methods, parallel, MplusAutomation
lme4, arm, qgraph, dplyr (>= 0.5.0), clusterGeneration,
mvtnorm, corpcor, plyr, abind, methods, parallel,
MplusAutomation, graphicalVAR, rlang
magrittr, xml2, dplyr, stringr, purrr, utils, stats, foreach,
iterators, parallel, doParallel, DBI
magrittr, xml2, dplyr, stringr, purrr, tidyr, utils, stats,
foreach, iterators, parallel, doParallel, DBI
dplyr (>= 1.0), tidyr (>= 1.0), glue, purrr, tibble, utils,
jsonlite, janitor, rvest, stringr, xml2
httr, dplyr (>= 1.0), tidyr (>= 1.0), glue, purrr, tibble,
utils, jsonlite, janitor, rvest, ggtext, stringr, ggplot2, xml2
shiny (>= 0.11), XML, circlize, graphics, grDevices
shiny (>= 0.11), XML, circlize, graphics, grDevices, stats
shiny (>= 0.11), XML, circlize, graphics, grDevices, stats,
methods
sparklyr, jsonlite, purrr, fs, tibble, rJava, digest
digest, fs, jsonlite, purrr, rJava, sparklyr, tibble
stats, grDevices, class, nnet, MASS, e1071, randomForest,
ipred
parallel, Matrix, stringr, stats, GGally, ggplot2, cowplot,
reshape2, plyr, methods, graphics, sna
parallel (>= 3.6.0), Matrix (>= 1.2.17), stringr, stats,
GGally, ggplot2, cowplot, reshape2, plyr, methods, graphics,
sna (>= 2.4)
parallel, Matrix, stringr, stats, GGally, ggplot2, cowplot,
reshape2, plyr, methods, graphics, sna (>= 2.4)
parallel, Matrix, stringr, stats, GGally, ggplot2, cowplot,
reshape2, plyr, methods, graphics, lpSolve, sna (>= 2.4)
BB, dplyr, hms, kimisc, Matrix, plyr, tibble, forcats, rlang,
utils, wrswoR, lifecycle
aws.s3, forge, fs, git2r, httpuv, httr, jsonlite, openssl,
processx, reticulate, packrat, purrr, swagger, withr, xml2,
yaml, pryr, rlang (>= 0.2.0)
base64enc, forge, fs, git2r, httpuv, httr, ini, jsonlite,
openssl, processx, reticulate, packrat, purrr, swagger, withr,
xml2, yaml, pryr, rlang (>= 0.2.0)
base64enc, forge, fs, git2r, httpuv, httr, ini, jsonlite,
openssl, processx, reticulate, purrr, swagger, withr, xml2,
yaml, rlang (>= 0.2.0), zeallot, tibble, glue
base64enc, forge, fs, git2r, httpuv, httr, ini, jsonlite,
openssl, processx, reticulate, purrr, swagger, withr, xml2,
yaml, rlang (>= 0.2.0), zeallot, tibble (>= 2.0.0), glue
base64enc, forge, fs, git2r, glue, httpuv, httr, ini,
jsonlite, openssl, processx, purrr, reticulate, rlang (>=
0.2.0), swagger, tibble (>= 2.0.0), withr, xml2, yaml, zeallot
base64enc, forge, fs, git2r, glue, httpuv, httr, ini,
jsonlite, openssl, processx, purrr, reticulate, rlang (>=
0.2.0), swagger, tibble (>= 2.0.0), withr, yaml, zeallot
base64enc, forge, fs, git2r, glue, httpuv, httr, ini,
jsonlite, openssl, processx, purrr, rlang (>= 0.2.0), swagger,
tibble (>= 2.0.0), withr, yaml, zeallot
h2o (>= 3.34.0.0), mice, missRanger, memuse, md.log (>= 0.2.0)
MASS, gsl, norm, cat, mix, Matrix, stats, utils
MASS, gsl, norm, cat, mix, Matrix, stats, utils, nlme
rstan (>= 2.16.2), rstantools (>= 1.3.0), MASS, Matrix,
stats4, ggplot2
quantspec, waveslim, Rfast, TSclust, forecast, tseries, TSA,
tsfeatures, tseriesChaos, freqdom, e1071, dtw, base, psych,
complexplus, MTS, Matrix, ggplot2, multiwave, MASS, fda.usc,
TSdist, evolqg, geigen, DescTools, pracma, pspline, Rdpack,
stats, ClusterR, AID, caret, ranger
quantspec, waveslim, Rfast, TSclust, forecast, tseries, TSA,
tsfeatures, tseriesChaos, freqdom, e1071, dtw, base, psych,
complexplus, MTS, Matrix, ggplot2, multiwave, MASS, fda.usc,
TSdist, evolqg, geigen, DescTools, pracma, pspline, Rdpack,
stats, ClusterR, AID, caret, ranger, igraph, randomForest
Formula, zoo, lmtest, statmod, MASS, Rdpack
utils, stats, DiceKriging, digest, ggplot2, randtoolbox,
rlist, WeightSVM, rgenoud
BBmisc (>= 1.3-64), parallelMap, codetools
parallelMap (>= 1.1), codetools, survival, checkmate (>= 1.1)
BBmisc (>= 1.10), backports, ggplot2, stats, stringi,
checkmate (>= 1.8.1), data.table, methods, parallelMap (>=
1.3), survival, utils
BBmisc (>= 1.11), backports, ggplot2, stats, stringi,
checkmate (>= 1.8.2), data.table, methods, parallelMap (>=
1.3), survival, utils
BBmisc (>= 1.11), backports (>= 1.1.0), ggplot2, stats,
stringi, checkmate (>= 1.8.2), data.table, methods, parallelMap
(>= 1.3), survival, utils, XML
backports (>= 1.1.0), BBmisc (>= 1.11), checkmate (>= 1.8.2),
data.table, ggplot2, methods, parallelMap (>= 1.3), stats,
stringi, survival, utils, XML
backports (>= 1.1.0), BBmisc (>= 1.11), checkmate (>= 1.8.2),
data.table (>= 1.12.4), ggplot2, methods, parallelMap (>= 1.3),
stats, stringi, survival, utils, XML
checkmate (>= 1.4), codetools, ggplot2, parallelMap (>= 1.1),
plyr, survival
checkmate (>= 1.5.1), parallelMap (>= 1.2), plyr, reshape2,
survival
checkmate (>= 1.5.3), ggvis, parallelMap (>= 1.3), plyr,
reshape2, shiny, survival
checkmate (>= 1.6.2), ggvis, methods, parallelMap (>= 1.3),
plyr, reshape2, shiny, survival
checkmate (>= 1.7.1), ggvis, methods, parallelMap (>= 1.3),
plyr, reshape2, shiny, survival
checkmate (>= 1.8.1), data.table, ggvis, methods, parallelMap
(>= 1.3), plyr, reshape2, shiny, survival, utils
backports, checkmate (>= 1.9.3), data.table, digest, lgr (>=
0.3.0), Metrics, mlbench, mlr3misc (>= 0.1.1), paradox, R6
backports, checkmate (>= 1.9.3), data.table, digest, lgr (>=
0.3.0), Metrics, mlbench, mlr3misc (>= 0.1.3), paradox, R6
backports, checkmate (>= 1.9.3), data.table, digest, lgr (>=
0.3.0), Metrics, mlbench, mlr3misc (>= 0.1.3), paradox, uuid,
R6
backports, checkmate (>= 1.9.3), data.table, digest, lgr (>=
0.3.0), Metrics, mlbench, mlr3misc (>= 0.1.5), paradox, uuid,
R6
backports, checkmate (>= 1.9.3), data.table, digest, lgr (>=
0.3.0), mlbench, mlr3misc (>= 0.1.5), mlr3measures (>= 0.1.1),
paradox, uuid, R6
backports, checkmate (>= 1.9.3), data.table, digest, lgr (>=
0.3.0), mlbench, mlr3measures (>= 0.1.1), mlr3misc (>= 0.1.6),
paradox, R6, uuid
R6, backports, checkmate (>= 1.9.3), data.table, digest, lgr
(>= 0.3.0), mlbench, mlr3measures (>= 0.1.1), mlr3misc (>=
0.1.8), paradox, uuid
R6, backports, checkmate (>= 1.9.3), data.table, digest, lgr
(>= 0.3.0), mlbench, mlr3measures (>= 0.1.2), mlr3misc (>=
0.1.8), paradox, uuid
R6 (>= 2.4.1), backports, checkmate (>= 2.0.0), data.table (>=
1.13.6), digest, future.apply (>= 1.5.0), lgr (>= 0.3.4),
mlbench, mlr3measures (>= 0.3.0), mlr3misc (>= 0.7.0),
parallelly, palmerpenguins, paradox (>= 0.6.0), uuid
R6 (>= 2.4.1), backports, checkmate (>= 2.0.0), data.table (>=
1.13.6), future, future.apply (>= 1.5.0), lgr (>= 0.3.4),
mlbench, mlr3measures (>= 0.3.0), mlr3misc (>= 0.9.3),
parallelly, palmerpenguins, paradox (>= 0.6.0), uuid
R6 (>= 2.4.1), backports, checkmate (>= 2.0.0), data.table (>=
1.14.2), future, future.apply (>= 1.5.0), lgr (>= 0.3.4),
mlbench, mlr3measures (>= 0.4.0), mlr3misc (>= 0.9.3),
parallelly, palmerpenguins, paradox (>= 0.6.0), uuid
R6 (>= 2.4.1), backports, checkmate (>= 2.0.0), data.table (>=
1.14.2), future, future.apply (>= 1.5.0), lgr (>= 0.3.4),
mlbench, mlr3measures (>= 0.4.1), mlr3misc (>= 0.10.0),
parallelly, palmerpenguins, paradox (>= 0.6.0), uuid
R6 (>= 2.4.1), backports, checkmate (>= 2.0.0), data.table (>=
1.14.2), evaluate, future, future.apply (>= 1.5.0), lgr (>=
0.3.4), mlbench, mlr3measures (>= 0.4.1), mlr3misc (>= 0.10.0),
parallelly, palmerpenguins, paradox (>= 0.8.0), uuid
R6 (>= 2.4.1), backports, checkmate (>= 2.0.0), data.table (>=
1.14.2), evaluate, future, future.apply (>= 1.5.0), lgr (>=
0.3.4), mlbench, mlr3measures (>= 0.4.1), mlr3misc (>= 0.10.0),
parallelly, palmerpenguins, paradox (>= 0.10.0), uuid
R6 (>= 2.4.1), backports, checkmate (>= 2.0.0), data.table (>=
1.14.2), evaluate, future, future.apply (>= 1.5.0), lgr (>=
0.3.4), mlbench, mlr3measures (>= 0.4.1), mlr3misc (>= 0.11.0),
parallelly, palmerpenguins, paradox (>= 0.10.0), uuid
checkmate, data.table, ggplot2, mlr3misc, R6
backports (>= 1.1.10), checkmate, clue, clusterCrit,
data.table, mlr3 (>= 0.5.0), mlr3misc (>= 0.4.0), paradox, R6
backports (>= 1.1.10), checkmate, clue, clusterCrit,
data.table, mlr3misc (>= 0.4.0), paradox, R6
backports (>= 1.1.10), checkmate, clue, clusterCrit,
data.table, mlr3misc (>= 0.9.4), paradox, R6, stats
backports (>= 1.1.10), checkmate, clue, clusterCrit, cluster,
data.table, mlr3misc (>= 0.9.4), paradox, R6, stats
checkmate, data.table, digest, dplyr, mlr3 (>= 0.1.1), R6
checkmate, data.table, digest, dplyr, mlr3 (>= 0.1.2), R6
checkmate, data.table, digest, dplyr, mlr3 (>= 0.1.4), R6
backports, checkmate, data.table, digest, dplyr, mlr3 (>=
0.1.4), R6
backports, checkmate, data.table, digest, dplyr, mlr3 (>=
0.3.0), mlr3misc, R6
R6, backports, checkmate, data.table, digest, mlr3misc,
R6, backports, checkmate, data.table, mlr3misc (>= 0.9.3),
R6, backports, checkmate, data.table, mlr3misc (>= 0.10.0)
checkmate, R6 (>= 2.4.1), data.table (>= 1.13.6), paradox,
mlr3measures, mlr3misc, mlr3pipelines, ggplot2
backports, checkmate, data.table, mlr3 (>= 0.1.2), mlr3misc,
paradox, R6
backports, checkmate, data.table, mlr3 (>= 0.1.8), mlr3misc,
paradox, R6
backports, checkmate, data.table, mlr3 (>= 0.12.0), mlr3misc,
paradox, R6
bbotk (>= 0.2.0), checkmate (>= 2.0.0), data.table, lgr, mlr3,
mlr3misc, paradox (>= 0.3.0), R6
bbotk (>= 0.2.0), checkmate (>= 1.9.4), data.table, lgr, mlr3
(>= 0.7.0), mlr3misc, mlr3tuning (>= 0.2.0), paradox, R6
data.table, mlr3 (>= 0.1.1), mlr3misc, paradox, R6
data.table, mlr3 (>= 0.1.2), mlr3misc, paradox, R6
data.table, mlr3 (>= 0.1.4), mlr3misc (>= 0.1.5), paradox, R6
data.table, mlr3 (>= 0.1.4), mlr3misc (>= 0.1.7), paradox, R6
data.table, mlr3 (>= 0.2.0), mlr3misc (>= 0.2.0), paradox, R6
data.table, mlr3 (>= 0.5.0), mlr3misc (>= 0.5.0), paradox, R6
data.table, mlr3 (>= 0.6.0), mlr3misc (>= 0.5.0), paradox, R6
data.table, mlr3misc (>= 0.5.0), paradox, R6
checkmate, data.table, mlr3misc (>= 0.5.0), paradox, R6
checkmate, data.table, mlr3misc (>= 0.9.4), paradox, R6
backports (>= 0.1.5), checkmate, data.table, R6
backports (>= 0.1.5), checkmate, data.table, digest, R6
backports (>= 0.1.5), checkmate, data.table, digest, methods,
R6
backports (>= 1.1.6), checkmate, curl, data.table, jsonlite,
lgr, mlr3, mlr3misc, R6, stringi
backports (>= 1.1.6), checkmate, curl, data.table, jsonlite,
lgr, mlr3, mlr3misc (>= 0.5.0), R6, stringi
backports (>= 1.1.6), checkmate, curl, data.table, jsonlite,
lgr, mlr3, mlr3misc (>= 0.7.0), R6, stringi
backports (>= 1.1.6), checkmate, curl, data.table, jsonlite,
lgr, mlr3 (>= 0.10.0), mlr3misc (>= 0.7.0), R6, stringi
backports (>= 1.1.6), checkmate, curl, data.table, jsonlite,
lgr, methods, mlr3 (>= 0.14.0), mlr3misc (>= 0.7.0), paradox,
R6, stringi, uuid, withr
backports, checkmate, data.table, digest, mlr3 (>= 0.1.3),
mlr3misc (>= 0.1.4), paradox, R6, withr
backports, checkmate, data.table, digest, mlr3 (>= 0.1.4),
mlr3misc (>= 0.1.4), paradox, R6, withr
backports, checkmate, data.table, digest, lgr, mlr3 (>=
0.1.4), mlr3misc (>= 0.1.4), paradox, R6, withr
backports, checkmate, data.table, digest, lgr, mlr3 (>=
0.6.0), mlr3misc (>= 0.5.0), paradox, R6, withr
backports, checkmate, data.table, digest, lgr, mlr3 (>=
0.6.0), mlr3misc (>= 0.7.0), paradox, R6, withr
backports, checkmate, data.table, digest, lgr, mlr3 (>=
0.6.0), mlr3misc (>= 0.9.0), paradox, R6, withr
BBmisc, checkmate, data.table, distr6 (>= 1.3.1), mboost, mlr3
(>= 0.1.4), mlr3misc (>= 0.1.5), mlr3pipelines, paradox (>=
0.1.0), R6, survival, survivalsvm
BBmisc, checkmate, data.table, distr6 (>= 1.3.1), mboost, mlr3
(>= 0.1.4), mlr3misc (>= 0.1.5), mlr3pipelines, paradox (>=
0.1.0), R6, survival
checkmate, data.table, distr6 (>= 1.3.3), mboost, mlr3 (>=
0.1.4), mlr3misc (>= 0.1.5), mlr3pipelines, paradox (>= 0.1.0),
R6, survival
checkmate, data.table, distr6 (>= 1.3.4), mlr3 (>= 0.1.4),
mlr3misc (>= 0.1.7), mlr3pipelines, paradox (>= 0.1.0), R6,
survival
checkmate, data.table, distr6 (>= 1.3.5), mlr3 (>= 0.1.7),
mlr3misc (>= 0.1.7), mlr3pipelines, paradox (>= 0.1.0), R6,
survival
checkmate, data.table, distr6 (>= 1.3.6), mlr3 (>= 0.1.8),
mlr3misc (>= 0.1.7), mlr3pipelines, paradox (>= 0.1.0), R6,
survival
checkmate, data.table, distr6 (>= 1.3.6), mlr3 (>= 0.3.0),
mlr3misc (>= 0.1.7), mlr3pipelines, paradox (>= 0.1.0), R6,
survival
checkmate, data.table, distr6 (>= 1.4.2), mlr3 (>= 0.3.0),
mlr3misc (>= 0.1.7), mlr3pipelines, paradox (>= 0.1.0), Rcpp
(>= 1.0.4), R6, survival
checkmate, data.table, distr6 (>= 1.6.0), mlr3misc (>= 0.7.0),
paradox (>= 0.1.0), R6, Rcpp (>= 1.0.4), survival
checkmate, data.table, distr6 (>= 1.6.4), mlr3misc (>= 0.7.0),
paradox (>= 0.1.0), R6, Rcpp (>= 1.0.4), survival
checkmate, data.table, distr6 (>= 1.6.6), mlr3misc (>= 0.7.0),
paradox (>= 0.1.0), R6, Rcpp (>= 1.0.4), survival
checkmate, data.table, distr6 (>= 1.6.8), mlr3misc (>= 0.7.0),
paradox (>= 0.1.0), R6, Rcpp (>= 1.0.4), survival,
survivalmodels (>= 0.1.12)
mlr3 (>= 0.1.6), mlr3measures (>= 0.1.1), mlr3learners, shiny,
shinythemes, shinydashboard, shinyjs, shinyWidgets, shinyalert,
data.table (>= 1.12.8), DT (>= 0.11), readxl, stringr, plyr,
purrr, ranger, e1071, stats
mlr3 (>= 0.12.0), mlr3measures (>= 0.3.1), mlr3learners, shiny
(>= 1.6.0), shinythemes, shinydashboard, shinyjs (>= 2.0.0),
shinyWidgets, shinyalert, data.table (>= 1.12.8), DT (>= 0.11),
readxl, stringr, plyr, purrr, ranger, e1071, stats
checkmate, data.table, ggplot2, mlr3 (>= 0.7.0), mlr3misc (>=
0.1.7), paradox, R6, testthat (>= 3.0.0), utils
checkmate, data.table, ggplot2, mlr3 (>= 0.7.0), mlr3misc (>=
0.7.0), paradox, R6, utils
checkmate, data.table, ggplot2, mlr3 (>= 0.12.0), mlr3misc (>=
0.9.2), paradox, R6, utils
checkmate, data.table, ggplot2, mlr3misc (>= 0.9.2), paradox,
R6, utils
checkmate, data.table, ggplot2 (>= 3.4.0), mlr3misc (>=
0.11.0), paradox, R6, utils
checkmate (>= 1.9.4), data.table, lgr, mlr3, mlr3misc,
paradox, R6
checkmate (>= 1.9.4), data.table, lgr, mlr3 (>= 0.1.4),
mlr3misc (>= 0.1.5), paradox, R6
checkmate (>= 1.9.4), data.table, lgr, mlr3 (>= 0.1.4),
mlr3misc (>= 0.1.7), paradox, R6
bbotk (>= 0.4.0), checkmate (>= 2.0.0), data.table, digest,
lgr, mlr3misc (>= 0.9.4), R6
bbotk, data.table, mlr3, mlr3cluster, mlr3data, mlr3filters,
mlr3fselect, mlr3learners, mlr3misc, mlr3pipelines, mlr3proba,
mlr3tuning, mlr3viz, paradox
bbotk, data.table, mlr3 (>= 0.11.0), mlr3cluster, mlr3data,
mlr3filters, mlr3fselect, mlr3learners, mlr3misc,
mlr3pipelines, mlr3proba, mlr3tuning (>= 0.7.0), mlr3viz,
paradox (>= 0.6.0)
bbotk, data.table, mlr3cluster, mlr3data, mlr3filters,
mlr3fselect, mlr3learners, mlr3misc, mlr3pipelines, mlr3proba
(>= 0.4.0), mlr3tuning (>= 0.8.0), mlr3viz, paradox (>= 0.6.0)
bbotk, data.table, mlr3cluster, mlr3data, mlr3filters,
mlr3fselect (>= 0.6.0), mlr3hyperband, mlr3learners, mlr3misc,
mlr3pipelines (>= 0.4.0), mlr3proba (>= 0.4.0), mlr3tuning (>=
0.9.0), mlr3tuningspaces (>= 0.1.1), mlr3viz, paradox (>=
0.6.0)
bbotk, data.table, mlr3cluster, mlr3data, mlr3filters,
mlr3fselect (>= 0.6.0), mlr3hyperband, mlr3learners, mlr3misc,
mlr3pipelines (>= 0.4.0), mlr3tuning (>= 0.9.0),
mlr3tuningspaces (>= 0.1.1), mlr3viz, paradox (>= 0.6.0)
bbotk, data.table, mlr3cluster, mlr3data, mlr3filters,
mlr3fselect (>= 0.6.0), mlr3hyperband, mlr3learners, mlr3misc
(>= 0.11.0), mlr3pipelines (>= 0.4.0), mlr3tuning (>= 0.15.0),
mlr3tuningspaces (>= 0.1.1), mlr3viz, paradox (>= 0.6.0)
bbotk, data.table, mlr3cluster, mlr3data, mlr3filters,
mlr3fselect (>= 0.8.0), mlr3hyperband, mlr3learners, mlr3misc
(>= 0.11.0), mlr3pipelines (>= 0.4.0), mlr3tuning (>= 0.17.0),
mlr3tuningspaces (>= 0.1.1), mlr3viz, paradox (>= 0.6.0)
checkmate, data.table, ggplot2, mlr3misc, utils
checkmate, data.table, ggplot2 (>= 3.3.0), mlr3misc, utils
checkmate, data.table, ggplot2 (>= 3.3.0), mlr3misc (>=
0.7.0), utils
checkmate, data.table, ggplot2 (>= 3.3.0), mlr3misc (>=
0.7.0), scales, utils, viridis
BBmisc (>= 1.11), stringi, checkmate (>= 1.8.3), methods,
stats, utils, backports (>= 1.1.0)
backports, BBmisc (>= 1.11), checkmate (>= 1.8.2), data.table,
lhs, parallelMap (>= 1.3)
backports (>= 1.1.0), BBmisc (>= 1.11), checkmate (>= 1.8.2),
data.table, lhs, parallelMap (>= 1.3)
backports, checkmate, data.table, mlr3misc (>= 0.1.4),
paradox, R6, lhs, callr, bbotk, mlr3tuning
BB, stats, quadprog, graphics, methods, grDevices, sandwich,
numDeriv
BB, alabama, stats, quadprog, graphics, methods, grDevices,
sandwich, numDeriv, survival
BB, alabama, stats, coneproj, graphics, methods, grDevices,
sandwich, numDeriv, survival
BB, alabama, stats, coneproj, graphics, methods, grDevices,
sandwich, numDeriv, survival, nloptr
BB, alabama, stats, coneproj, graphics, methods, grDevices,
sandwich, numDeriv, survival, nloptr, Matrix
BB, alabama, stats, coneproj, graphics, methods, grDevices,
sandwich, numDeriv, survival, Matrix
numDeriv, stats, eha, multcomp (>= 1.4-4), lattice, survival,
flexsurv, truncreg, np
numDeriv, stats, eha, multcomp (>= 1.4-4), lattice, survival,
flexsurv, truncreg
data.table(>= 1.9.7), Matrix, methods, stats
XML, Rcpp (>= 0.11.3), tools, tcltk, methods, graphics,
grDevices, utils, stats
XML, Rcpp (>= 0.11.3), tools, methods, graphics, grDevices,
utils, stats, tcltk
tools, methods, graphics, grDevices, utils, stats
stats, methods, graphics, grDevices, reportr, Rcpp
htmltools, Cairo, xts, lubridate, zoo, caTools, ggplot2,
data.table, DT, dplyr, leaflet, stringr, shiny, XML, shinyjs,
plotly
Rdpack, datasets, stats, foreach, parallel, doParallel
magrittr, dplyr, purrr, stringr, rlang, ggplot2
checkmate (>= 2.0), lifecycle, methods, nlme, numDeriv,
parallel, Rdpack, stats, stringr, TMB (>= 1.9.1)
httr, jsonlite, utils, dplyr, tibble, Rcpp (>= 0.12.10)
httr, jsonlite, utils, dplyr, tibble, stringi, Rcpp (>=
0.12.10)
httr, jsonlite, utils, dplyr, tibble, stringi, Rcpp, janitor,
purrr
stats, copBasic, grDevices, ks, lattice, SpatialExtremes, zoo,
copula, ggplot2, viridis,
plotrix, scales, dplyr, purrr, tidyr, pbapply, ggplot2, egg,
tibble, vctrs, rlang, geosphere
Rcpp, vegan, sads (>= 0.4.1), grDevices, utils, graphics,
stats
stats, amap, mco, nsga2R, reshape2, miscTools, matrixStats,
fields, Rmisc, plyr, foreach, parallel, doParallel, utils,
doSNOW, doMPI
graphics, grDevices, stats, methods, terra
RColorBrewer, xts, dygraphs, highcharter, jsonlite, lazyeval,
networkD3, leaflet, lubridate, dplyr, reshape2, rgdal,
rpivotTable, shiny, shinyBS, shinyWidgets, shinydashboard,
shinydashboardPlus, sp, sunburstR, tidyr, treemap, DT,
sparkline, collapsibleTree, plotly
DT, RColorBrewer, collapsibleTree, dplyr, dygraphs,
highcharter, jsonlite, lazyeval, leaflet, networkD3, plotly,
rgdal, shiny, shinyBS, shinydashboard, shinydashboardPlus, sp,
sparkline, sunburstR, treemap, htmlwidgets, magrittr
stats, quantreg, survival, coxrobust, methods, MASS, Rcpp
stats, quantreg, survival, coxrobust, MASS, Rcpp
bazar, fBasics, genefilter, stable, stabledist, stats, statip
fBasics, stable, stabledist, stats, statip (>= 0.2.3)
sandwich, stats, ggplot2, Formula, gridExtra, survival
sandwich, stats, methods, ggplot2, Formula, gridExtra,
survival
iBreakDown (>= 0.9.9), ingredients (>= 0.3.9), r2d3, jsonlite
iBreakDown (>= 0.9.9), ingredients (>= 0.4.0), r2d3, jsonlite
iBreakDown (>= 0.9.9), ingredients (>= 0.5), r2d3, jsonlite
iBreakDown (>= 1.0), ingredients (>= 1.0), r2d3, jsonlite
iBreakDown (>= 1.0), ingredients (>= 1.0), r2d3, jsonlite,
progress
iBreakDown (>= 1.0), ingredients (>= 1.0), r2d3, jsonlite,
progress, digest
iBreakDown (>= 1.1.0), ingredients (>= 1.0.0), r2d3, jsonlite,
progress, digest
DALEX (>= 2.0), ingredients (>= 2.0), iBreakDown (>= 1.3.1),
r2d3, jsonlite, progress, digest
DALEX (>= 2.0.1), ingredients (>= 2.0), iBreakDown (>= 1.3.1),
r2d3, jsonlite, progress, digest
DALEX (>= 2.2.1), ingredients (>= 2.2.0), iBreakDown (>=
2.0.1), r2d3, jsonlite, progress, digest
insight (>= 0.7.1), bayestestR (>= 0.4.0), parameters (>=
0.3.0), effectsize (>= 0.0.1), emmeans
insight (>= 0.7.1), bayestestR (>= 0.4.0), parameters (>=
0.3.0), emmeans, graphics, stats, utils
insight (>= 0.7.1), bayestestR (>= 0.4.0), parameters (>=
0.3.0), emmeans (>= 1.4.4), graphics, stats, utils
insight (>= 0.11.0), bayestestR (>= 0.8.0), parameters (>=
0.10.0), emmeans (>= 1.4.4), graphics, stats, utils
bayestestR (>= 0.8.3), emmeans (>= 1.5.3), graphics, insight
(>= 0.13.1), parameters (>= 0.12.0), stats, utils
graphics, stats, utils, bayestestR (>= 0.10.0), effectsize (>=
0.4.5), insight (>= 0.14.1), parameters (>= 0.14.0),
performance
bayestestR (>= 0.11.5), effectsize (>= 0.5.0), insight (>=
0.14.5), datawizard (>= 0.2.1), parameters (>= 0.15.0),
performance, graphics, stats, utils
bayestestR (>= 0.11.5), effectsize (>= 0.6.0.1), insight (>=
0.15.0), datawizard (>= 0.2.3), parameters (>= 0.16.0),
performance, graphics, stats, utils
bayestestR (>= 0.11.5), effectsize (>= 0.6.0.1), insight (>=
0.17.0), datawizard (>= 0.4.0), parameters (>= 0.17.0),
performance (>= 0.8.0), graphics, stats, utils
bayestestR (>= 0.12.1), effectsize (>= 0.6.0.1), insight (>=
0.17.1), datawizard (>= 0.4.1), parameters (>= 0.18.0),
performance (>= 0.8.0), graphics, stats, utils
bayestestR (>= 0.12.1), effectsize (>= 0.7.0), insight (>=
0.18.0), datawizard (>= 0.5.0), parameters (>= 0.18.0),
performance (>= 0.9.0), graphics, stats, utils
dplyr(>= 0.7), rlang, purrr, tibble, tidyr, progress, ggplot2,
readr
dplyr(>= 0.7), rlang, purrr, tibble, progress, ggplot2
dplyr(>= 0.7), rlang, purrr, tibble, progress, ggplot2,
tidypredict
dplyr(>= 0.7), ggplot2, progress, purrr, rlang, tibble,
tidypredict
caret, purrr, dplyr, magrittr, ggplot2, lattice
dplyr, ggplot2, stringr, foreach, magrittr, scales
magrittr, purrr (>= 0.2.2), lazyeval (>= 0.2.0), tibble,
broom, dplyr, tidyr (>= 0.6.0)
broom, magrittr, purrr (>= 0.2.2), rlang (>= 1.0.6), tibble,
tidyr (>= 0.8.0), tidyselect, vctrs
broom, dplyr, magrittr, purrr (>= 0.2.2), tibble, tidyr (>=
0.8.0), rlang (>= 0.2.0)
broom, dplyr, magrittr, purrr (>= 0.2.2), rlang (>= 0.2.0),
tibble, tidyr (>= 0.8.0)
broom, dplyr, magrittr, purrr (>= 0.2.2), rlang (>= 0.2.0),
tibble, tidyr (>= 0.8.0), tidyselect
broom, magrittr, purrr (>= 0.2.2), rlang (>= 0.2.0), tibble,
tidyr (>= 0.8.0), tidyselect, vctrs
broom, checkmate, generics, glue, insight (>= 0.16.1),
kableExtra (>= 1.2.1), parameters (>= 0.17.0), performance,
tables
broom, checkmate, data.table, generics, glue, insight (>=
0.16.1), kableExtra (>= 1.2.1), parameters (>= 0.17.0),
performance, tables
broom, checkmate, dplyr, generics, gt (>= 0.2.0), knitr (>=
1.16), magrittr, kableExtra, purrr, rmarkdown (>= 1.6.0),
stringr, tibble, tidyr (>= 1.0.0)
broom, checkmate, dplyr, generics, ggplot2, gt (>= 0.2.0),
Hmisc, kableExtra, knitr (>= 1.16), magrittr, purrr, rmarkdown
(>= 1.6.0), stringr, tibble, tidyr (>= 1.0.0)
broom, checkmate, dplyr (>= 1.0.0), generics, ggplot2,
kableExtra (>= 1.2.1), knitr, magrittr, rmarkdown, tables,
tibble, tidyr (>= 1.0.0)
broom, checkmate, dplyr (>= 1.0.0), generics, kableExtra (>=
1.2.1), tables, tidyr (>= 1.0.0)
broom, checkmate, generics, glue, insight, kableExtra (>=
1.2.1), parameters, performance, tables
broom, checkmate, generics, glue, insight, kableExtra (>=
1.2.1), parameters, performance, tables, tidyr, tidyselect
broom, checkmate, generics, glue, insight, kableExtra (>=
1.2.1), parameters, performance, rlang, tables, tidyr,
tidyselect
broom, checkmate, generics, glue, insight, kableExtra (>=
1.2.1), parameters, performance, rlang, tables
broom, checkmate, data.table, generics, glue, insight (>=
0.16.1), kableExtra (>= 1.2.1), parameters (>= 0.17.0),
performance (>= 0.9.1), tables
broom, checkmate, data.table, generics, glue, insight (>=
0.18.0), kableExtra (>= 1.2.1), parameters (>= 0.18.1),
performance (>= 0.9.1), tables
broom, checkmate (>= 2.1.0), data.table, generics, glue,
insight (>= 0.18.5), kableExtra (>= 1.2.1), parameters (>=
0.19.0), performance (>= 0.10.0), tables (>= 0.9.10)
broom, checkmate (>= 2.1.0), data.table, generics, glue,
insight (>= 0.18.7), kableExtra (>= 1.2.1), parameters (>=
0.19.0), performance (>= 0.10.0), tables (>= 0.9.10)
timetk (>= 2.0.0), parsnip (>= 0.1.0), dials, yardstick,
workflows, hardhat, rlang (>= 0.1.2), glue, plotly, reactable,
gt, ggplot2, tibble, tidyr, dplyr, purrr, stringr, forcats,
scales, janitor, progressr, magrittr, forecast, xgboost,
prophet
timetk (>= 2.1.0), parsnip (>= 0.1.2), dials, yardstick,
workflows, hardhat, rlang (>= 0.1.2), glue, plotly, reactable,
gt, ggplot2, tibble, tidyr, dplyr, purrr, stringr, forcats,
scales, janitor, progressr, magrittr, forecast, xgboost,
prophet, methods
StanHeaders, timetk (>= 2.1.0), parsnip (>= 0.1.3), dials,
yardstick, workflows (>= 0.1.3), hardhat, rlang (>= 0.1.2),
glue, plotly, reactable, gt, ggplot2, tibble, tidyr, dplyr,
purrr, stringr, forcats, scales, janitor, progressr, magrittr,
forecast, xgboost, prophet, methods
StanHeaders, timetk (>= 2.5.0), parsnip (>= 0.1.4), dials,
yardstick, workflows (>= 0.1.3), hardhat, rlang (>= 0.1.2),
glue, plotly, reactable, gt, ggplot2, tibble, tidyr, dplyr,
purrr, stringr, forcats, scales, janitor, progressr, magrittr,
forecast, xgboost (>= 1.2.0.1), prophet, methods, cli
StanHeaders, timetk (>= 2.6.0), parsnip (>= 0.1.4), dials,
yardstick, workflows (>= 0.1.3), hardhat, rlang (>= 0.1.2),
glue, plotly, reactable, gt, ggplot2, tibble, tidyr, dplyr,
purrr, slider, stringr, forcats, scales, janitor, progressr,
magrittr, forecast, xgboost (>= 1.2.0.1), prophet, methods, cli
StanHeaders, timetk (>= 2.6.0), parsnip (>= 0.1.4), dials,
yardstick (>= 0.0.8), workflows (>= 0.1.3), hardhat, rlang (>=
0.1.2), glue, plotly, reactable, gt, ggplot2, tibble, tidyr,
dplyr, purrr, stringr, forcats, scales, janitor, progressr,
magrittr, forecast, xgboost (>= 1.2.0.1), prophet, methods, cli
StanHeaders, timetk (>= 2.6.0), parsnip (>= 0.1.6), dials,
yardstick (>= 0.0.8), workflows (>= 0.1.3), hardhat, rlang (>=
0.1.2), glue, plotly, reactable, gt, ggplot2, tibble, tidyr,
dplyr, purrr, stringr, forcats, scales, janitor, parallel,
doParallel, foreach, magrittr, forecast, xgboost (>= 1.2.0.1),
prophet, methods, cli
StanHeaders, timetk (>= 2.8.0), parsnip (>= 0.2.1), dials,
yardstick (>= 0.0.8), workflows (>= 0.1.3), hardhat, rlang (>=
0.1.2), glue, plotly, reactable, gt, ggplot2, tibble, tidyr,
dplyr, purrr, stringr, forcats, scales, janitor, parallel,
doParallel, foreach, magrittr, forecast, xgboost (>= 1.2.0.1),
prophet, methods, cli
StanHeaders, timetk (>= 2.8.1), parsnip (>= 0.2.1), dials,
yardstick (>= 0.0.8), workflows (>= 0.1.3), hardhat, rlang (>=
0.1.2), glue, plotly, reactable, gt, ggplot2, tibble, tidyr,
dplyr, purrr, stringr, forcats, scales, janitor, parallel,
parallelly, doParallel, foreach, magrittr, forecast, xgboost
(>= 1.2.0.1), prophet, methods, cli
StanHeaders, timetk (>= 2.8.1), parsnip (>= 0.2.1), dials,
yardstick (>= 0.0.8), workflows (>= 0.1.3), hardhat (>= 1.0.0),
rlang (>= 0.1.2), glue, plotly, reactable, gt, ggplot2, tibble,
tidyr, dplyr, purrr, stringr, forcats, scales, janitor,
parallel, parallelly, doParallel, foreach, magrittr, forecast,
xgboost (>= 1.2.0.1), prophet, methods, cli
StanHeaders, timetk (>= 2.8.1), parsnip (>= 0.2.1), dials,
yardstick (>= 0.0.8), workflows (>= 1.0.0), hardhat (>= 1.0.0),
rlang (>= 0.1.2), glue, plotly, reactable, gt, ggplot2, tibble,
tidyr, dplyr, purrr, stringr, forcats, scales, janitor,
parallel, parallelly, doParallel, foreach, magrittr, forecast,
xgboost (>= 1.2.0.1), prophet, methods, cli
tune, rsample, yardstick, workflows, parsnip, recipes, dials,
timetk (>= 2.3.0), tibble, dplyr, tidyr, purrr, glue, stringr,
rlang (>= 0.1.2), cli, crayon, utils, generics, magrittr,
glmnet, progressr, tictoc
tune, rsample, yardstick, workflows, parsnip, recipes, dials,
timetk (>= 2.5.0), tibble, dplyr (>= 1.0.0), tidyr, purrr,
glue, stringr, rlang (>= 0.1.2), cli, crayon, utils, generics,
magrittr, glmnet, progressr, tictoc
tune (>= 0.1.2), rsample, yardstick, workflows (>= 0.2.1),
parsnip (>= 0.1.4), recipes (>= 0.1.15), dials, timetk (>=
2.5.0), tibble, dplyr (>= 1.0.0), tidyr, purrr, glue, stringr,
rlang (>= 0.1.2), cli, crayon, utils, generics, magrittr,
glmnet, progressr, tictoc
tune (>= 0.1.2), rsample, yardstick, workflows (>= 0.2.1),
parsnip (>= 0.1.6), recipes (>= 0.1.15), dials, timetk (>=
2.5.0), tibble, dplyr (>= 1.0.0), tidyr, purrr, glue, stringr,
rlang (>= 0.1.2), cli, crayon, utils, generics, magrittr,
glmnet, progressr, tictoc
tune (>= 0.1.2), rsample, yardstick, workflows (>= 0.2.1),
parsnip (>= 0.1.6), recipes (>= 0.1.15), timetk (>= 2.5.0),
tibble, dplyr (>= 1.0.0), tidyr, purrr, glue, stringr, rlang
(>= 0.1.2), cli, generics, magrittr, tictoc
tune (>= 0.1.2), rsample, yardstick, workflows (>= 0.2.1),
parsnip (>= 0.1.6), recipes (>= 0.1.15), timetk (>= 2.5.0),
tibble, dplyr (>= 1.0.0), tidyr, purrr, glue, stringr, rlang
(>= 0.1.2), cli, generics, magrittr, tictoc, parallel,
doParallel, foreach,
parsnip, timetk, magrittr, rlang (>= 0.1.2), reticulate,
tibble, forcats, dplyr, tidyr, purrr, stringr, glue, fs
magrittr, rlang (>= 0.1.2), tibble, timetk (>= 2.6.0), dplyr,
parsnip (>= 0.1.4), purrr, tidyr, stringr, stats, glue, fs
tune, rsample, workflows, parsnip (>= 0.1.4), recipes, dials,
yardstick, timetk (>= 2.5.0), tibble, dplyr, tidyr, purrr,
forcats, glue, stringr, ggplot2, plotly, cli, crayon, magrittr,
rlang (>= 0.1.2), progressr, tictoc
tune, rsample, workflows, parsnip (>= 0.1.4), recipes, dials,
yardstick, timetk (>= 2.5.0), tibble, dplyr, tidyr, purrr,
forcats, glue, stringr, ggplot2, plotly, cli, crayon, magrittr,
rlang (>= 0.1.2), progressr, tictoc, hardhat
magrittr, dplyr, rlang, tibble, janitor, broom (>= 0.4.3),
formula.tools, stringr, knitr, assertive
magrittr, dplyr, tibble, janitor, broom (>= 0.4.3),
formula.tools, stringr, knitr, assertive, infer, rlang
magrittr, dplyr, ggplot2, tibble, janitor, broom (>= 0.4.3),
formula.tools, stringr, knitr, infer, rlang (>= 0.2.0), glue
mlbench, e1071, purrr, magrittr, ggplot2, ModelMetrics, dplyr,
stringr, gridExtra, tibble, psych, utils, knitr, caret
MASS (>= 7.3-50), norm (>= 1.0-9.5), stats, graphics, utils
abind, corpcor, ggplot2, glinternet, glmnet, gridExtra,
gtools, igraph, interactionTest, leaps, lme4, lmerTest, Matrix,
methods, mvtnorm, parallel, pbapply, plyr, psych, qgraph,
reshape2, systemfit
magrittr, glue, purrr, httr, jsonlite, tibble, readr, rlang,
stringr, assertthat, cli, dplyr, lubridate
RJSONIO, magrittr, tidyr, iterators, stringr, compareDF
Rcpp, doParallel, foreach, ggplot2, ggridges, ess
igraph, dplyr, stringr, WGCNA, Rfast, readr, tibble, tidyr,
magrittr, rlang
Rcpp (>= 0.12.16), glmnet, mclust, sgd, survival, pracma
Rcpp, doParallel, foreach, numDeriv, CircStats, crawl, ggmap,
ggplot2, mitools, moveHMM, raster, argosfilter, car, mvtnorm,
boot, sp, MASS, Brobdingnag, gstat, conicfit, nleqslv,
survival, qdapRegex
Rcpp, doParallel, foreach, numDeriv, CircStats, crawl, ggmap,
ggplot2, mitools, moveHMM, raster, argosfilter, car, mvtnorm,
boot, sp, MASS, Brobdingnag, gstat, conicfit, nleqslv,
survival, qdapRegex, geosphere
Rcpp, doParallel, foreach, numDeriv, CircStats, crawl, ggmap,
ggplot2, mitools, moveHMM, raster, argosfilter, car, mvtnorm,
boot, sp, MASS, Brobdingnag, gstat, conicfit, nleqslv,
survival, qdapRegex, geosphere, LaplacesDemon
Rcpp, doParallel, foreach, numDeriv, CircStats, crawl, ggmap,
ggplot2, mitools, moveHMM, raster, argosfilter, car, mvtnorm,
boot, sp, MASS, Brobdingnag, gstat, conicfit, nleqslv,
survival, qdapRegex, geosphere, LaplacesDemon, prodlim
Rcpp, doParallel, foreach, numDeriv, CircStats, crawl, ggmap,
ggplot2, mitools, moveHMM, raster, argosfilter, car, mvtnorm,
boot, sp, MASS, Brobdingnag, gstat, conicfit, nleqslv,
survival, qdapRegex, geosphere, LaplacesDemon, prodlim, dplyr,
magrittr
Rcpp, doParallel, foreach, numDeriv, CircStats, crawl (>=
2.2.1), ggmap, ggplot2, mitools, moveHMM, raster, argosfilter,
car, mvtnorm, boot, sp, MASS, Brobdingnag, gstat, conicfit,
nleqslv, survival, qdapRegex, geosphere, LaplacesDemon,
prodlim, dplyr, magrittr, doRNG
Rcpp, doParallel, foreach, numDeriv, CircStats, crawl (>=
2.2.1), ggmap, ggplot2, mitools, moveHMM, raster, argosfilter,
car, mvtnorm, sp, MASS, Brobdingnag, conicfit, nleqslv,
survival, qdapRegex, geosphere, prodlim, dplyr, magrittr,
doRNG, scatterplot3d, data.tree, lubridate, extraDistr, rlang
Rcpp, doParallel, foreach, numDeriv, CircStats, crawl (>=
2.2.1), mitools, car, mvtnorm, sp, MASS, Brobdingnag, nleqslv,
survival, qdapRegex, geosphere, prodlim, doRNG, data.tree (>=
1.0.0), extraDistr, rlang
Rcpp, doParallel, foreach, numDeriv, CircStats, crawl (>=
2.2.1), mvtnorm, sp, MASS, Brobdingnag, doRNG, rlang
Rcpp, doParallel, foreach, numDeriv, CircStats, crawl (>=
2.2.1), mvtnorm, sp, MASS, Brobdingnag, doRNG, rlang, raster
htmlwidgets, rstudioapi, tools, htmltools, shiny
htmlwidgets (>= 1.5.3), rstudioapi, tools, htmltools, shiny
rvest, httr, magrittr, rlang, xml2, glue, lifecycle, purrr
jsonlite (>= 1.4), openssl (>= 0.9.4), mime
jsonlite (>= 1.4), openssl (>= 1.0), mime
jsonlite, httr, methods, digest, tibble (>= 1.2)
cowsay, digest, dplyr, httr, jsonlite, magrittr, methods,
purrr, tibble (>= 1.2), tidyr, ratelimitr
cluster, doParallel, dplyr (>= 1.0.0), foreach, ggplot2,
graphics, grDevices, parallel, permute, purrr, rlang (>=
0.3.0), stats, stringr, tibble, tidyr
cli (>= 2.0.0), cluster, doParallel, dplyr (>= 1.0.0),
foreach, ggplot2, graphics, grDevices, parallel, permute,
purrr, rlang (>= 0.3.0), stats, stringr, tibble (>= 3.0.0),
tidyr
cluster (>= 2.0.5), doParallel, dplyr (>= 1.0.0), foreach,
ggplot2, graphics, grDevices, parallel, permute, purrr (>=
0.3.0), rlang (>= 0.3.0), stats, stringr (>= 0.5), tibble (>=
3.0.0), tidyr (>= 1.0.0)
ape, cluster, circular, geomorph, gplots, phytools, rgl
lmtest, MASS, sandwich, stats, methods, utils
DBI, dplyr, ggplot2, tidytext, ggwordcloud, utils, stringr,
rlang, scales, RMariaDB, glue, config, anytime, here, cli,
lifecycle, RSQLite
DBI, dplyr, ggplot2, tidytext, ggwordcloud, utils, stringr,
rlang, scales, RMariaDB, glue, config, anytime, cli, lifecycle,
RSQLite, usethis, RPostgres
nortest, survival, sjmisc, purrr, stringr, magrittr
nortest, survival, sjmisc, stringr, magrittr, ztable
nortest, survival, sjmisc, stringr, magrittr, crayon
splancs, spam, spatstat, sampling, dismo, rpart, tree, e1071,
earth, randomForest, PresenceAbsence, lattice, gtools, ranger,
abind,
splancs, spam, spatstat, sampling, dismo, rpart, tree, e1071,
earth, randomForest, PresenceAbsence, lattice, graphics,
grDevices, gtools, ranger, abind,
dplyr, magrittr, purrr, rlang, stringr, tibble, tidyr
dplyr, ggplot2, ggraph, igraph, magrittr, purrr, rlang, stats,
stringr, tibble, tidyr
partykit, varImp, plyr, foreach, measures, methods, MASS, iml
partykit, varImp, plyr, foreach, measures, methods, MASS, iml,
pdp, vip, ggplot2, rlang
partykit, varImp, plyr, foreach, measures, methods, MASS, iml,
pdp, vip, ggplot2, rlang, shiny, shinyWidgets, rclipboard, DT,
datamods, phosphoricons
dlr (>= 1.0.0), magrittr, morphemepiece.data, piecemaker (>=
1.0.0), purrr (>= 0.3.4), rlang, stringr (>= 1.4.0)
dlr (>= 1.0.0), magrittr, morphemepiece.data, piecemaker (>=
1.0.0), purrr (>= 0.3.4), readr, rlang, stringr (>= 1.4.0)
dlr (>= 1.0.0), fastmatch, magrittr, memoise (>= 2.0.0),
morphemepiece.data, piecemaker (>= 1.0.0), purrr (>= 0.3.4),
readr, rlang, stringr (>= 1.4.0)
coda, dplyr, graphics, grDevices, ggplot2, grid, gridExtra,
methods, rjags, stats, stringr
coda, dplyr, epitools, graphics, grDevices, ggplot2 (>=
2.1.0), grid, gridExtra, methods, reshape2, rjags (>= 4.0),
stats, stringr
coda, dplyr, epitools, graphics, grDevices, ggplot2 (>=
2.1.0), grid, gridExtra, magrittr, methods, reshape2, rjags (>=
4.0), stats, tibble, tidyr, zoo
coda, deSolve, dplyr, epitools, graphics, grDevices, ggplot2
(>= 2.1.0), grid, gridExtra, magrittr, methods, reshape2, rjags
(>= 4.0), stats, tibble, tidyr, zoo
lazyeval, MASS, grid, reshape2, plyr, readr, methods, utils,
splines, latticeExtra, gridExtra, ggdendro
lazyeval, MASS, grid, reshape2, readr, methods, utils,
splines, latticeExtra, ggdendro, gridExtra
lazyeval (>= 0.2.0), MASS, grid, tidyr, readr, methods, utils,
splines, latticeExtra, ggdendro, gridExtra
lazyeval (>= 0.1.10.9000), MASS, grid, reshape2, readr,
methods, utils, splines, latticeExtra, ggdendro, gridExtra
Hmisc, methods, utils, splines, latticeExtra
grid, reshape2, plyr, Hmisc, methods, utils, splines,
latticeExtra, gridExtra, ggdendro
mosaicData, MASS, grid, reshape2, plyr, methods, utils,
splines, latticeExtra, gridExtra, ggdendro
mosaicCore, ggplot2, lazyeval (>= 0.2.0), MASS, grid, tidyr,
readr, methods, utils, splines, latticeExtra, ggdendro,
gridExtra, Matrix, glue
mosaicCore, ggplot2, lazyeval (>= 0.2.0), MASS, grid, tidyr,
readr, methods, utils, splines, latticeExtra, ggdendro,
gridExtra, glue
mosaicCore, ggplot2, lazyeval (>= 0.2.0), MASS, grid, tidyr,
readr, methods, utils, splines, latticeExtra, ggdendro,
gridExtra, glue, broom
mosaicCore (>= 0.5.0), ggplot2, lazyeval (>= 0.2.0), MASS,
grid, tidyr, readr, methods, utils, splines, latticeExtra,
ggdendro, gridExtra, glue, broom
mosaicCore (>= 0.5.0), ggplot2, ggrepel, lazyeval (>= 0.2.0),
MASS, grid, tidyr, readr, methods, utils, splines,
latticeExtra, ggdendro, gridExtra, glue, broom
mosaicCore (>= 0.5.0), ggplot2, ggrepel, lazyeval (>= 0.2.0),
MASS, grid, tidyr, readr, methods, utils, splines,
latticeExtra, ggdendro, gridExtra, glue, broom, leaflet
mosaicCore (>= 0.5.0), ggplot2, ggrepel, rlang, MASS, grid,
tidyr, readr, methods, utils, splines, latticeExtra, ggdendro,
gridExtra, glue, broom, leaflet
dplyr, lattice (>= 0.20-21), ggformula, mosaicData, Matrix,
mosaicCore (>= 0.7.0), ggplot2, ggstance, ggridges, ggrepel,
rlang (>= 0.4.7), MASS, grid, tidyr, readr, methods, utils,
splines, latticeExtra, ggdendro, gridExtra, glue, broom,
leaflet
dplyr, lattice (>= 0.20-21), ggformula, mosaicData, Matrix,
mosaicCore (>= 0.7.0), ggplot2, rlang (>= 0.4.7), purrr, MASS,
grid, tidyr, methods, utils
methods, stats, MASS, mosaic, ggformula, magrittr, rlang
cubature, Deriv, dplyr, ggformula, ggplot2, glue, grDevices,
MASS, Matrix, metR (>= 0.11.0), orthopolynom, plotly, rlang,
Ryacas, sp, stats, tibble
stats, dplyr, lazyeval, rlang, tidyr, MASS
caret, ggplot2, ggformula, lazyeval, knitr, MASS, testthat,
tibble, tidyr, tidyverse
BBmisc, checkmate (>= 1.9.0), ParamHelpers, MASS, smoof,
mlrCPO (>= 0.3.4), mlr, parallelMap
magrittr, assertthat, pracma, NlcOptim, nloptr, sfsmisc
methods, RColorBrewer, plot3D, Rcpp (>= 0.12.5)
comat, philentropy, Rcpp, sf, stars, tibble
comat, philentropy (>= 0.6.0), Rcpp, sf, stars, tibble
dplyr, ggplot2 (>= 2.1.0), ggraph, igraph, intergraph,
network, purrr, RColorBrewer, reshape2, reticulate, rlang,
scales, tibble, tidygraph
utils, stats, pracma, reshape2, graphics, grDevices, ggplot2,
scales, psych (>= 1.2.4), diptest
utils, stats, pracma, reshape2, graphics, grDevices, ggplot2,
scales, psych (>= 1.2.4), diptest, RColorBrewer
utils, stats, pracma, dplyr (>= 0.5.0), tidyr, magrittr,
graphics, grDevices, ggplot2, scales, psych (>= 1.2.4),
diptest, RColorBrewer
utils, stats, pracma, dplyr (>= 0.5.0), tidyr, magrittr,
graphics, grDevices, ggplot2, scales, psych (>= 1.2.4), Rcpp
(>= 0.11.4), diptest, RColorBrewer, cstab, fastcluster
utils, stats, pracma, dplyr (>= 0.5.0), tidyr, magrittr,
graphics, grDevices, ggplot2, scales, psych (>= 1.2.4), Rcpp
(>= 0.11.4), diptest, RColorBrewer, cstab, fastcluster,
parallel, fields
utils, stats, pracma, dplyr (>= 0.5.0), tidyr, magrittr,
graphics, grDevices, ggplot2, scales, psych (>= 1.2.4), Rcpp
(>= 0.11.4), diptest, RColorBrewer, cstab, fastcluster,
parallel, fields, rlang
utils, stats, pracma, dplyr (>= 0.5.0), tidyr, magrittr,
graphics, grDevices, ggplot2, scales, psych (>= 1.2.4), Rcpp
(>= 0.11.4), diptest, RColorBrewer, cstab, fastcluster,
parallel, fields, rlang, lifecycle
Rcpp, boot, MASS, sp, geosphere, ggplot2, ggmap
Rcpp, boot, MASS, sp, geosphere, ggplot2, ggmap, numDeriv
raster, sp, sf, move, RStoolbox, geosphere, slippymath,
lubridate, rlang, ggplot2, cowplot, gifski, magick, av,
pbapply, curl, plyr, dplyr, zoo, methods, grDevices
raster, sp, sf, move, RStoolbox, geosphere, slippymath,
lubridate, ggplot2, cowplot, gifski, magick, av, pbapply, curl,
plyr, dplyr, zoo, magrittr, methods, grDevices
move, raster, sf, lwgeom, slippymath, lubridate, curl,
ggplot2, cowplot, magick, gifski, av, pbapply, magrittr,
methods, stats
animation, xts, maptools, ggplot2, grid, rasterVis, raster,
sp, geosphere, dismo, utils, grDevices, methods, stats, move,
RCurl
animation, xts, maptools, ggplot2, grid, rasterVis, raster,
sp, geosphere, dismo, utils, grDevices, methods, stats, move,
RCurl, gridExtra, reshape, graphics
maptools, ggplot2, grid, rasterVis, raster, sp, geosphere,
dismo, utils, grDevices, methods, stats, move, RCurl,
gridExtra, graphics, simecol, plyr, zoo, lubridate, parallel,
pbapply, RStoolbox
maptools, ggplot2, grid, rasterVis, raster, sp, geosphere,
dismo, utils, grDevices, methods, stats, move, gridExtra,
graphics, simecol, plyr, zoo, lubridate, parallel, pbapply,
RStoolbox
maptools, ggplot2, grid, rasterVis, raster, sp, geosphere,
rosm, utils, grDevices, methods, stats, move, gridExtra,
graphics, simecol, plyr, zoo, lubridate, parallel, pbapply,
RStoolbox
ggplot2, Matrix, methods, qtl, igraph, fastcluster, pryr,
nnls, Heatplus, RColorBrewer, jsonlite, progress, stats, sn,
car
ggplot2, Matrix, methods, qtl, igraph, fastcluster, pryr,
nnls, RColorBrewer, jsonlite, progress, stats, sn, car
MASS, pscl, numDeriv, foreach, doParallel, bst
MASS, numDeriv, foreach, doParallel, bst
MASS, pscl, numDeriv, foreach, doParallel, bst, WeightSVM
DBI, dbplyr, dplyr, furrr, future, jsonlite, lubridate,
magrittr, purrr, rjson, RSQLite, stats, tibble, tidyr
DBI, dbplyr, dplyr, furrr, future, jsonlite, lubridate,
magrittr, purrr, rjson, rlang, RSQLite, stats, tibble, tidyr
DBI, dbplyr, dplyr, furrr, jsonlite, lifecycle, lubridate,
magrittr, purrr, rlang, RSQLite, stats, tibble, tidyr
Rcpp, graphics, grDevices, stats, ggplot2, ggpubr, generics,
tibble, dplyr, broom, rlang, stringr, purrr
Rcpp, graphics, grDevices, stats, ggplot2, ggpubr, generics,
tibble, dplyr, rlang, stringr, purrr
leaps, foreach, parallel, bestglm, doParallel, plyr,
shinydashboard, shiny, googleVis
leaps, foreach, parallel, bestglm, doParallel, plyr,
shinydashboard, shiny, glmnet, googleVis, graphics, stats
leaps, foreach, parallel, bestglm, doParallel, plyr,
shinydashboard, shiny, glmnet, graphics, stats, googleVis
leaps, foreach, parallel, bestglm, doParallel, plyr,
shinydashboard, shiny, glmnet, graphics, stats, googleVis,
ggplot2, reshape2, scales, glmulti, dplyr
leaps, foreach, parallel, bestglm, doParallel, doRNG, plyr,
shinydashboard, shiny, glmnet, graphics, stats, googleVis,
ggplot2, reshape2, scales, dplyr
leaps, foreach, parallel, bestglm, doParallel, doRNG, plyr,
shinydashboard, shiny, glmnet, graphics, stats, googleVis,
ggplot2, reshape2, scales, dplyr, tidyr
leaps, foreach, parallel, bestglm, doParallel, doRNG, plyr,
shinydashboard, shiny, glmnet, graphics, stats, googleVis,
ggplot2, reshape2, scales, dplyr, tidyr, magrittr
stringr, rSymPy, rJython, rJava, rjson, partitions, plyr
stringr, rSymPy, rJython, rJava, rjson, partitions, plyr,
stats
rSymPy, rJython, rJava, rjson, partitions, plyr, stats
rSymPy, rJython, rJava, rjson, partitions, plyr, stats,
ggplot2, polynom, orthopolynom, reshape2
rSymPy, rJython, rJava, rjson, partitions, plyr, stats,
ggplot2, polynom, orthopolynom, tidyr
partitions, plyr, stats, ggplot2, polynom, orthopolynom, tidyr
stringr (>= 1.0.0), partitions, plyr, stats, ggplot2, polynom,
orthopolynom, tidyr
stringr (>= 1.0.0), stringi, partitions, plyr, stats, ggplot2,
polynom, orthopolynom, tidyr
abind, boot, dplyr, doSNOW, foreach, ggplot2, MASS, magrittr,
parallel, purrr, snow, sbgcop, rlang, reshape2, tibble, tidyr,
tidyselect
ggplot2, graphics, grDevices, methods, parallel, qtl, stats,
synbreed, utils, igraph
ggplot2, graphics, grDevices, methods, parallel, qtl, stats,
utils, igraph
methods, utils, grDevices, graphics, stats, raster, sp,
animation, lattice, zoo, rasterVis, latticeExtra, viridis
comprehenr, data.table, dplyr, flowTraceR, forcats, ggplot2,
magrittr, plotly, purrr, stats, stringr, tibble, tidyr, UpSetR
mvtnorm, multcomp, survival, survPresmooth, stats
optimx (>= 2013.8.6), mgcv, numDeriv, Rsolnp
optimx (>= 2013.8.6), mgcv, methods, numDeriv, Rsolnp
httr (>= 1.1.0), jsonlite (>= 1.0), xml2, wellknown, rappdirs,
sp, data.table, tibble
utils, httr (>= 1.1.0), jsonlite (>= 1.0), xml2, rappdirs, sp,
sf, data.table, tibble, geojsonio, geojson, geojsonsf
limSolve, DEoptim, stats, forecast, monmlp, nnfor
Rcpp (>= 1.0.1), dplyr(>= 0.8.1), reshape2, methods, ggplot2,
Rdpack
Rcpp (>= 1.0.1), dplyr(>= 0.8.1), reshape2, tidyr, methods,
ggplot2, Rdpack
Rcpp (>= 1.0.1), dplyr(>= 0.8.1), tidyr, methods, ggplot2,
Rdpack
abind, geometry, grid, matrixStats, reshape2,
abind, geometry, grid, matrixStats, reshape2
parallel, dplyr, future, future.apply, callr, fst
withr, purrr, dplyr, assertthat, rlang, ggplot2, tidyselect,
tidyr, methods, tibble, patchwork
data.table (>= 1.12.9), dplyr (>= 1.0.0), lubridate, magrittr,
progress, purrr, rlang (>= 0.1.2), sjlabelled, stringr,
tidyselect, tidytable (>= 0.5.5), tidyr (>= 1.0.0), utils
data.table (>= 1.12.9), dplyr (>= 1.0.0), lubridate, magrittr,
progress, purrr, rlang (>= 0.1.2), sjlabelled, stringr,
tidyselect, tidytable (>= 0.6.1), tidyr (>= 1.0.0), utils
dplyr (>= 1.0.0), lubridate, magrittr, progress, purrr, rlang
(>= 0.1.2), sjlabelled, stringr, tidyselect, tidytable (>=
0.7.2), tidyr (>= 1.0.0)
glmnet, foreach, mvtnorm, Matrix, lattice
glmnet, ncvreg (>= 3.7-0), foreach, mvtnorm, Matrix, lattice
glmnet, ncvreg (>= 3.8-0), foreach, mvtnorm, survival, Matrix,
lattice
glmnet, ncvreg (>= 3.8-0), foreach, mvtnorm, survival, Matrix
GO.db, org.Hs.eg.db, org.Mm.eg.db, AnnotationDbi, gplots
AnnotationDbi, gplots, XLConnect, wordcloud, RColorBrewer
stats, purrr,data.table,officer (>= 0.1.5),
R6,cellranger,writexl,grDevices, xml2 (>= 1.1.0)
stats, data.table, officer (>= 0.2.0), R6,cellranger,
writexl,grDevices, xml2 (>= 1.1.0), htmltools
stats, data.table, officer (>= 0.3.6), R6,cellranger,
writexl,grDevices, xml2 (>= 1.1.0), htmltools
stats, data.table, officer (>= 0.3.6), cellranger, writexl,
grDevices, xml2 (>= 1.1.0), htmltools
stats, data.table, officer (>= 0.3.6), cellranger, writexl,
grDevices, xml2 (>= 1.1.0), htmltools, utils
methods, httr, jsonlite, pander, stringi, dplyr, utils
Rcpp (>= 0.12.7), methods, stats, tools, whisker
tools, utils, poio (>= 0.0-2), digest, tibble, hunspell,
devtools
tools, utils, poio (>= 0.0-3), digest, tibble, hunspell,
devtools
magrittr (>= 1.5), purrr (>= 0.3.4), dplyr (>= 1.0.4),
forcats, stringr, ggplot2, ggbeeswarm, rlang, tidyr, tidyselect
do, rvest, xml2, set, plyr, httr, jsonlite, utils, kableExtra,
tmcn, crayon, dplyr, stringr, sqldf
magrittr, rlang, dplyr (>= 0.7.0), tibble
magrittr, rlang, dplyr (>= 0.7.0), tibble, tidyselect
babelgene, dplyr (>= 0.7.0), magrittr, rlang, tibble,
tidyselect
mclust (>= 5.4), stats, utils, graphics, grDevices
dplyr, glue, httr2, magrittr, memoise, purrr, readr, rlang,
tibble, tidyjson, tidyr
glmnet, e1071, rgl, RColorBrewer, colorspace, stats, grDevices
expm, Matrix, PP, mirt (>= 1.31), scDIFtest, eRm, strucchange
expm, Matrix, PP, mirt (>= 1.31), scDIFtest, eRm
rlang, data.table, magrittr, lattice, RColorBrewer, viridis
rlang, data.table, lattice, RColorBrewer, viridisLite
foreach, parallel, doParallel, nls2, RColorBrewer, plotrix
httr (>= 1.4.1), openssl (>= 1.4.1), jsonlite (>= 1.6),
methods, R6, miniUI, rstudioapi, shinyjs, shiny
httr (>= 1.4.1), crul, openssl (>= 1.4.1), jsonlite (>= 1.6),
methods, data.table, R6, miniUI, rstudioapi, shinyjs, shiny
httr (>= 1.4.1), crul, openssl (>= 1.4.1), jsonlite (>= 1.6),
methods, data.table, R6, rstudioapi, shinyjs, shiny
httr (>= 1.4.1), crul, openssl (>= 1.4.1), jsonlite (>= 1.6),
methods, data.table, R6, markdown, rstudioapi, shinyjs, shiny,
vctrs (>= 0.3.8)
methods, MASS, class, e1071, randomForest, pls, ellipse,
lattice, latticeExtra
methods, data.table (>= 1.9.6), XML (>= 3.98), stringr (>=
1.0), plyr (>= 1.8.3), dplyr (>= 0.4.3), ggplot2, magrittr,
tidyr, dtw, proxy
methods, data.table (>= 1.9.6), XML (>= 3.98), stringr (>=
1.0), plyr (>= 1.8.3), dplyr (>= 0.5.0), ggplot2, magrittr,
tidyr, dtw, proxy
methods, data.table (>= 1.9.6), XML (>= 3.98), stringr (>=
1.0), plyr (>= 1.8.3), dplyr (>= 0.5.0), ggplot2, magrittr,
lubridate, tidyr, dtw, proxy
dplyr, ggplot2, logger, magrittr, methods, Rcpp, rlang,
tibble, tidyr
doParallel, foreach, caret, mclust, stats
MASS, deldir, grDevices, splancs, sp, conf.design, Hmisc,
dplyr, purrr, gtools, magrittr, plyr, polyclip, rgeos, ggplot2
MASS, deldir, grDevices, splancs, sp, conf.design, Hmisc,
stats, dplyr, purrr, gtools, magrittr, plyr, polyclip, rgeos,
ggplot2, tidyr, scales, patchwork, cluster, reshape2, tidyverse
reshape2, ggplot2, plyr, dplyr, jsonlite (>= 1.2), methods
ggplot2, dplyr (>= 0.7), jsonlite (>= 1.2), methods, tibble,
magrittr, stringr, readr, tidyr, lubridate, hms, rlang,
tidyselect
ggplot2, dplyr (>= 0.7), jsonlite (>= 1.2), tibble, magrittr,
stringr, readr, tidyr, lubridate, rlang, tidyselect
ggplot2, dplyr (>= 0.7), jsonlite (>= 1.2), tibble, magrittr,
stringr, readr, tidyr, lubridate, rlang, tidyselect, withr, fs
ggplot2, dplyr (>= 0.7), jsonlite (>= 1.2), tibble, magrittr,
stringr, readr, tidyr, lubridate, rlang, tidyselect, withr,
glue, fs
gtools, boot, zoo, ggplot2, reshape2, stats, utils
boot, glmnet, mgcv, ggplot2, zoo, reshape2, stats, utils,
grDevices, broom, dplyr, graphics
abind, plyr, doParallel, future, foreach
rgl, tkrplot, tcltk, tcltk2, shapes, cluster, dendroextras,
Matrix
rgl, tkrplot, tcltk, tcltk2, shapes, plotrix, MASS, Matrix,
cluster, dendroextras, grDevices, graphics, stats, utils
ade4, car, FactoMineR, geigen, knitr, lme4, MASS, MFAg, mixlm,
plotrix, pls, plsVarSel, pracma, progress, r.jive, Rcpp,
RegularizedSCA, RGCCA, RSpectra, SSBtools
ade4, car, FactoMineR, geigen, knitr, lme4, MASS, mixlm,
plotrix, pls, plsVarSel, pracma, progress, r.jive, Rcpp,
RegularizedSCA, RGCCA, RSpectra, SSBtools
ade4, car, FactoMineR, geigen, lme4, MASS, mixlm, plotrix,
pls, plsVarSel, pracma, progress, r.jive, Rcpp, RegularizedSCA,
RGCCA, RSpectra, SSBtools
Brobdingnag, coda, mvtnorm, purrr, Rcpp (>= 0.12.17),
magrittr, progress, Rdpack, stringr
methods, utils, stats, graphics, grDevices, ranger, Boruta,
dunn.test, Biobase, switchBox
methods, utils, stats, graphics, grDevices
methods, utils, stats, graphics, grDevices, ranger, Boruta,
dunn.test, caret, e1071
methods, utils, stats, graphics, grDevices, ranger, Boruta,
dunn.test, caret, e1071, rdist
cowsay, crayon, dplyr, glue, magrittr, purrr, stringr, tibble
(>= 1.2), tidyr
cowsay, crayon, dplyr, glue, magrittr, purrr, stringi,
stringr, tibble (>= 1.2), tidyr
callr (>= 3.5.1), crayon, dplyr (>= 1.0.0), magrittr, qs (>=
0.24.1), R6, rlang, tibble, vctrs (>= 0.3.6), tidyselect
data.table, funData, MFPCA (>= 1.3-2), mgcv, sparseFLMM (>
0.3.0), stats, zoo
stats, dplyr, purrr, broom, MASS, utils, magrittr
assertive, data.table, fastmatch, parallel, yaml, MatrixModels
PSAgraphics, plyr, psych, reshape, proto, grid, party
PSAgraphics, plyr, psych, reshape, proto, grid, party, MASS
PSAgraphics, plyr, psych, reshape, grid, party, MASS
lme4, lmerTest, data.table (>= 1.12.0), nlme, extraoperators
(>= 0.1.1), JWileymisc (>= 1.1.0), cowplot, ggplot2, lavaan,
zoo
dplyr, lme4, purrr, rlang, tibble, withr
sys, fs, usethis, zip, askpass, xml2, rvest, rstudioapi
sys, fs, usethis, askpass, xml2, rvest, rstudioapi
parallel, statmod, Matrix, RMark, coda, methods, Brobdingnag,
mvtnorm
parallel, Matrix, coda, statmod, RMark, Brobdingnag, mvtnorm,
graphics, methods, stats, utils
parallel, Matrix, coda, statmod, RMark, Brobdingnag, mvtnorm,
graphics, methods, stats, utils, prodlim, sp, raster
parallel, doParallel, foreach, Matrix, coda, statmod, RMark,
Brobdingnag, mvtnorm, graphics, methods, stats, utils, prodlim,
sp, raster, doRNG
tidyverse, dplyr, lubridate, magrittr, stringr, rlang,
tidyselect, tidyr, devtools, sqldf, stats
methods, stats, graphics, Rcpp (>= 0.12.0), rstan (>= 2.19.2),
rstantools (>= 2.0.0), Rdpack (>= 0.7), tibble, dplyr (>=
0.8.1), rlang, purrr, forcats, glue, randtoolbox, copula, tidyr
(>= 0.8.3), stringr, Matrix, igraph, ggraph, ggplot2, ggdist
(>= 2.1.1), truncdist, bayesplot
methods, stats, graphics, Rcpp (>= 0.12.0), RcppParallel (>=
5.0.1), rstan (>= 2.19.2), rstantools (>= 2.0.0), Rdpack (>=
0.7), tibble (>= 2.1.3), dplyr (>= 0.8.3), rlang, purrr,
forcats, glue, randtoolbox, copula, tidyr (>= 1.0.0), stringr,
Matrix, igraph, ggraph, ggplot2, ggdist (>= 2.1.1), truncdist,
bayesplot
Rcpp (>= 1.0.8.3), MASS, doParallel, foreach, label.switching,
ggplot2, coda, matrixStats, mvtnorm, RColorBrewer
Rcpp (>= 0.12.11), parallel, Rglpk, quadprog, coda,
RcppXPtrUtils
MASS, truncnorm, tmvtnorm, fields, interp, MCMCpack, stats
assertive.base (>= 0.0-7), assertive.files (>= 0.0-2),
assertive.numbers (>= 0.0-2), assertive.properties (>= 0.0-4),
assertive.types (>= 0.0-3), caTools (>= 1.17.1), ComplexHeatmap
(>= 1.14.0), ggplot2 (>= 2.2.1), grid, gridGraphics (>= 0.1-5),
gtable (>= 0.2.0), jpeg (>= 0.1-8), magrittr (>= 1.5), png (>=
0.1-7), rsvg (>= 1.1), stats, tiff (>= 0.1-5), utils
assertive.base (>= 0.0-7), assertive.files (>= 0.0-2),
assertive.numbers (>= 0.0-2), assertive.properties (>= 0.0-4),
assertive.types (>= 0.0-3), caTools (>= 1.17.1), ggplot2 (>=
2.2.1), grid, gridGraphics (>= 0.2), gtable (>= 0.2.0), jpeg
(>= 0.1-8), magrittr (>= 1.5), png (>= 0.1-7), rsvg (>= 1.1),
stats, tiff (>= 0.1-5), utils
assertive.base (>= 0.0-5), assertive.files (>= 0.0-2),
assertive.numbers (>= 0.0-1), assertive.properties (>= 0.0-2),
assertive.types (>= 0.0-2), ggplot2 (>= 2.1.0), grid,
gridGraphics (>= 0.1-5), gtable (>= 0.2.0), jpeg (>= 0.1-8),
magrittr (>= 1.5), png (>= 0.1-7), rsvg (<= 0.5), stats, tiff
(>= 0.1-5), utils
assertive.base (>= 0.0-5), assertive.files (>= 0.0-2),
assertive.numbers (>= 0.0-1), assertive.properties (>= 0.0-2),
assertive.types (>= 0.0-2), ggplot2 (>= 2.1.0), grid,
gridGraphics (>= 0.1-5), gtable (>= 0.2.0), jpeg (>= 0.1-8),
magrittr (>= 1.5), png (>= 0.1-7), rsvg (>= 0.5), stats, tiff
(>= 0.1-5), utils
assertive.base (>= 0.0-7), assertive.files (>= 0.0-2),
assertive.numbers (>= 0.0-2), assertive.properties (>= 0.0-4),
assertive.types (>= 0.0-3), ggplot2 (>= 2.2.1), grid,
gridGraphics (>= 0.3-0), gtable (>= 0.2.0), jpeg (>= 0.1-8),
magrittr (>= 1.5), png (>= 0.1-7), rsvg (>= 1.3), stats, tiff
(>= 0.1-5), utils
assertive.base (>= 0.0-7), assertive.files (>= 0.0-2),
assertive.numbers (>= 0.0-2), assertive.properties (>= 0.0-4),
assertive.types (>= 0.0-3), ggplot2 (>= 2.2.1), grid,
gridGraphics (>= 0.3-0), gtable (>= 0.2.0), magick (>= 1.9),
magrittr (>= 1.5), stats, stringi (>= 1.2.3), utils
bigmemory (>= 4.5.19), bigmemory.sri (>= 0.1.3), lazyeval (>=
0.1.10), parallel, methods
bigmemory (>= 4.5.19), bigmemory.sri (>= 0.1.3), parallel,
methods
stats, graphics, utils, grDevices, sensitivity, knitr
AROC, coxme, lme4, lmerTest, logistf, metafor, pROC, survival
Rcpp (>= 0.12.10), data.table, dplyr, magrittr, networkD3,
survival, tidyr
data.table, dplyr, magrittr, networkD3, tidyr, webshot
data.table, dplyr, magrittr, networkD3, tidyr
methods, stats, utils, MASS, Rcpp (>= 1.0.3), Matrix, ggplot2,
vars, reshape2
methods, stats, utils, MASS, Rcpp (>= 1.0.3), Matrix, ggplot2,
vars, reshape2, glmnet
igraph, graphics, stats, Rcpp, microbenchmark
utils, emulator (>= 1.2-15), mvtnorm, methods, mathjaxr
utils, emulator (>= 1.2-13), mvtnorm, methods
utils, emulator (>= 1.2-15), mvtnorm, methods
dplyr (>= 0.8.1), purrr (>= 0.3.2), rlang (>= 0.4.0), R6,
methods, tidyr (>= 1.0.0), tibble, magrittr, tidyselect,
formatR, collections, evaluate, rstudioapi, berryFunctions
dplyr (>= 0.8.1), purrr (>= 0.3.2), rlang (>= 0.4.0), R6,
methods, tidyr (>= 1.0.0), tibble, magrittr, tidyselect,
formatR, collections, evaluate, rstudioapi, berryFunctions,
future.apply
glmnet, Matrix, methods, RColorBrewer, Rcpp, stats, survival,
utils
Matrix, stats, mclust, matrixStats, randnet, irlba,
doParallel, foreach
sandwich, boot, compiler, parallel, stats, utils
TMB, Rcpp, lme4, Matrix, stringr, methods
FNN, ggplot2, graphics, grDevices, gridExtra, gtools, pbapply,
plyr, proxy, reshape2, signal, stats, umap
FNN, ggplot2, graphics, grDevices, gridExtra, gtools, plyr,
proxy, reshape2, signal, stats, umap
FNN, ggplot2, graphics, grDevices, gridExtra, plyr, proxy,
reshape2, signal, stats, umap
graphics, stats, cluster, doParallel, ggplot2, pracma, proxy,
methods
plotrix, multtest (>= 2.2.0), multcomp (>= 1.1-0), methods
Rdpack, MASS, WeightIt, cobalt, matrixNormal, geometry, sp,
gbm, CBPS
stats, spam, graphics, glassoFast, parallel, pbmcapply
stats, utils, spam, graphics, glassoFast, parallel, pbmcapply
BMS, dplyr, lazyeval, plyr, rlang, utils, xts, zoo,
robustbase, graphics
dplyr, lazyeval, plyr, rlang, utils, xts, zoo, robustbase,
graphics
ape, graphics, methods, mvtnorm, Matrix, matrixcalc, ouch,
PCMBase, stats
ape (>= 5.3), graphics, methods, mvtnorm, Matrix, matrixcalc,
ouch, PCMBase (>= 1.2.10), stats
ape (>= 5.3), graphics, methods, mvtnorm, Matrix, matrixcalc,
ouch, PCMBase (>= 1.2.10), stats, TreeSim
ape (>= 5.3), graphics, methods, mvtnorm, Matrix, ouch,
PCMBase (>= 1.2.10), stats, TreeSim, matrixcalc
ape (>= 5.3), graphics, methods, mvtnorm, Matrix, ouch,
PCMBase (>= 1.2.10), stats, matrixcalc
Rcpp, MASS, methods, stats, tweedie, statmod
Rcpp, MASS, methods, stats, tweedie, statmod, parallel
Formula, MNM, nlme, quantreg, Rfit, SpatialNP
car, dummies, ggplot2, MASS, moments, parallel, penalized,
plyr, reshape2, sn
car, ggplot2, MASS, moments, parallel, penalized, plyr,
reshape2, sn
magrittr (>= 1.5), rlang, dplyr, tidyr, tidyselect, stringr,
stats, broom, grDevices, igraph, ggraph, ggplot2, cowplot
stats, graphics, grDevices, utils, Matrix
mixmeta, stats, graphics, grDevices, utils
ggplot2, reshape2, LaplacesDemon, rlang, Rcpp, MASS, truncnorm
MASS, pbivnorm, stats, optimx, mnormt, numDeriv, Matrix
Rcpp (>= 1.0-7), partitions, mpoly (>= 1.1.0), magic, digest,
disordR (>= 0.0-8)
Rcpp (>= 0.12.3), partitions, mpoly (>= 1.1.0), magic
matrixStats, stabledist, libstableR, mvtnorm, stats, cubature,
Matrix
gbm, RColorBrewer, stats, graphics, grDevices, utils,
splines, graphics, grDevices, stats, RColorBrewer
methods, MASS, rTensor, nnTensor, ccTensor, ica, igraph
methods, MASS, rTensor, nnTensor, ccTensor, iTensor, igraph
magrittr, dplyr, rlang, fda, stats, data.table, reticulate,
caret, e1071, ggplot2, tidyr, uwot, lme4, stringr, KernSmooth,
kSamples, psych, fossil
magrittr, dplyr, rlang, fda, stats, data.table, reticulate,
caret, e1071, ggplot2, tidyr, uwot, lme4, stringr, KernSmooth,
kSamples, psych, fossil, glue, methods
Deriv, stringr, stringi, compiler, methods,
tibble, dplyr, stringr, tidyselect, rlang, cli
htmltools, qrcode, here, lubridate, webshot, bib2df, dplyr
htmltools, qrcode, here, lubridate, webshot, bib2df, dplyr,
readr
htmltools, qrcode, here, lubridate, webshot, bib2df, dplyr,
readr, stringr
htmltools, qrcode, lubridate, webshot, bib2df, dplyr, readr,
stringr, R.utils
bib2df, dplyr, htmltools, lubridate, qrcode (>= 0.1.4),
R.utils, readr, stringr, webshot
fs, glue, magrittr, purrr, tibble, dplyr, rstudioapi
cli, dplyr, fs, glue, magrittr, purrr, rstudioapi, tibble
Rcpp, filesstrings, magrittr, readr, reshape2, R.utils,
autothresholdr, abind, viridis, dplyr, matrixStats,
BiocParallel, parallel, stringr, EBImage, RSAGA, ggplot2,
grDevices, RcppRoll, tibble, purrr, hexbin, ore, tiff
Rcpp, filesstrings (>= 1.1.0), magrittr, readr, reshape2,
R.utils, autothresholdr, abind, viridis, dplyr, matrixStats,
BiocParallel, stringr, EBImage, RSAGA, ggplot2, grDevices,
RcppRoll, tibble, purrr, hexbin, ore, DescTools
Rcpp, filesstrings (>= 2.2.0), magrittr, autothresholdr (>=
1.2.0), dplyr, stringr, purrr, checkmate, detrendr (>= 0.5.0),
ijtiff (>= 1.1.0), rlang, stats, MASS
Rcpp, filesstrings (>= 3.0.0), magrittr, autothresholdr (>=
1.3.0), dplyr, stringr, purrr, checkmate, detrendr (>= 0.6.0),
ijtiff (>= 1.5.0), rlang, stats, MASS, reshape2, viridis, glue,
BBmisc, ggplot2, assertthat, utils
Rcpp, filesstrings (>= 3.1.1), magrittr, autothresholdr (>=
1.3.1), dplyr, stringr, purrr, checkmate (>= 1.9.1), detrendr
(>= 0.6.1), ijtiff (>= 1.5.1), rlang (>= 0.3.3), reshape2,
viridis, glue (>= 1.3.0), BBmisc, ggplot2, assertthat, utils
Rcpp (>= 1.0.1), filesstrings (>= 3.1.3), magrittr (>= 1.5),
autothresholdr (>= 1.3.3), dplyr, stringr (>= 1.2.0), purrr,
checkmate (>= 1.9.3), detrendr (>= 0.6.2), ijtiff (>= 2.0.0),
rlang (>= 0.3.3), reshape2, viridis, glue (>= 1.3.0), BBmisc,
ggplot2, assertthat, withr (>= 2.1.0), utils
Rcpp (>= 1.0.1), filesstrings (>= 3.1.5), magrittr (>= 1.5),
autothresholdr (>= 1.3.3), dplyr, stringr (>= 1.2.0), purrr,
checkmate (>= 1.9.3), detrendr (>= 0.6.2), ijtiff (>= 2.0.0),
rlang (>= 0.3.3), reshape2, viridis, glue (>= 1.3.0), BBmisc,
ggplot2, assertthat, withr (>= 2.1.0), utils
Rcpp (>= 1.0.1), filesstrings (>= 3.1.5), magrittr (>= 1.5),
autothresholdr (>= 1.3.3), dplyr, stringr (>= 1.2.0), purrr,
checkmate (>= 1.9.3), detrendr (>= 0.6.2), ijtiff (>= 2.0.2),
rlang (>= 0.3.3), reshape2, viridis, glue (>= 1.3.0), BBmisc,
ggplot2, assertthat, withr (>= 2.1.0), utils
assertthat, autothresholdr (>= 1.3.3), BBmisc, checkmate (>=
1.9.3), detrendr (>= 0.6.2), dplyr, filesstrings (>= 3.1.5),
ggplot2, glue (>= 1.3.0), ijtiff (>= 2.0.2), magrittr (>= 1.5),
purrr, Rcpp (>= 1.0.1), reshape2, rlang (>= 0.3.3), stringr (>=
1.2.0), utils, viridis, withr (>= 2.1.0)
assertthat, autothresholdr (>= 1.3.7), BBmisc, checkmate (>=
1.9.3), detrendr (>= 0.6.2), dplyr, filesstrings (>= 3.2),
ggplot2, glue (>= 1.3), ijtiff (>= 2.2), magrittr (>= 1.5),
purrr, Rcpp (>= 1.0.1), reshape2, rlang (>= 0.3.3), stringr (>=
1.4), utils, viridis, withr (>= 2.1.0)
assertthat, autothresholdr (>= 1.3.11), BBmisc, checkmate (>=
1.9.3), detrendr (>= 0.6.12), dplyr, filesstrings (>= 3.2),
ggplot2, glue (>= 1.3), ijtiff (>= 2.2), magrittr (>= 1.5),
purrr, Rcpp (>= 1.0.1), reshape2, rlang (>= 0.3.3), stringr (>=
1.4), utils, viridis, withr (>= 2.1.0)
dplyr, ggplot2, purrr, tidyr, tibble, magrittr, stats, visdat,
purrrlyr, rlang, forcats, viridis
dplyr, ggplot2, purrr, tidyr, tibble, magrittr, stats, visdat,
purrrlyr, rlang, forcats, viridis, glue
dplyr, ggplot2, purrr, tidyr, tibble, magrittr, stats, visdat,
rlang, forcats, viridis, glue, tidyselect
dplyr, ggplot2, purrr, tidyr, tibble, magrittr, stats, visdat,
rlang, forcats, viridis, glue
dplyr, ggplot2, purrr, tidyr, tibble, magrittr, stats, visdat,
rlang, forcats, viridis, glue, UpSetR
dplyr, ggplot2, purrr, tidyr, tibble (>= 2.0.0), magrittr,
stats, visdat, rlang, forcats, viridis, glue, UpSetR
dplyr, ggplot2, purrr, tidyr, tibble (>= 2.0.0), norm,
magrittr, stats, visdat, rlang, forcats, viridis, glue, UpSetR
lifecycle, magrittr, tibble, dplyr, tidyselect, purrr, rlang,
tidyr, methods, lme4, stats, utils, knitr, widyr, Rtsne, gtools
assertthat, ccaPP, dplyr, magrittr, purrr, readr, rlang,
tibble
assertthat, ccaPP, dplyr, epiR, magrittr, purrr, rlang
assertthat, ccaPP, dplyr, epiR, forcats, magrittr, purrr,
rlang, tibble, tidyr
methods, bit64, RcppCCTZ (>= 0.2.3), zoo
methods, bit64, RcppCCTZ (>= 0.2.8), zoo
methods, bit64, RcppCCTZ (>= 0.2.9), zoo
stats, methods, car, strucchange, tseries, lmtest, matlab,
qpcR, Formula
stats, methods, car, strucchange, tseries, lmtest, matlab,
Formula
stats, strucchange, tseries, matlab, Formula, gtools
stats, strucchange, tseries, Formula, gtools
stats, strucchange, tseries, Formula, gtools, car, MASS
abind, pryr, reshape2, stats, stringr, utils
dplyr, glue, lifecycle, magrittr, parallel, purrr, stringr,
tidyr
APSIM, crul, curl, dplyr, lubridate, jsonlite, readr, tibble,
utils
APSIM, crul, curl, lubridate, jsonlite, readr, tibble
APSIM, crul, curl, lubridate, jsonlite, readr, tibble, utils
crul, curl, lubridate, jsonlite, readr, tibble
crul, lubridate, jsonlite, readr, tibble
crul, lubridate, jsonlite, readr, tibble (>= 3.0.2)
RANN, igraph, methods, filehash, digest, nat.utils
RANN, igraph, methods, filehash, digest, nat.utils (>= 0.4.2),
plyr
nabor, igraph, methods, filehash, digest, nat.utils (>=
0.4.2), plyr, yaml
nabor, igraph (>= 0.7.1), methods, filehash, digest, nat.utils
(>= 0.4.2), plyr, yaml
nabor, igraph (>= 0.7.1), methods, filehash (>= 2.3), digest,
nat.utils (>= 0.4.2), plyr, yaml
gh, utils, remotes, usethis, curl, withr
gh, utils, remotes, usethis (>= 2.0.0), curl, withr
gh (>= 1.2.1), utils, remotes, usethis (>= 2.0.0), curl, withr
crul (>= 0.7.0), xml2, tibble, data.table
Rglpk, stats, plyr, pps, sampling, ggplot2, rlang
Rglpk, stats, plyr, pps, sampling, ggplot2, rlang, ramify,
slam
shiny, shinyWidgets, dplyr, stringr, sp, raster,
shinydashboard, leaflet, leaflet.extras, tidytext, magrittr,
vegan, fasterize, sf, htmltools, methods, rlang
cli, dplyr, pillar, purrr, rlang, tibble, tidyselect, vctrs
cli, dplyr, pillar, purrr, rlang, tidyselect, vctrs
cli, lifecycle, pillar, purrr, rlang, stickyr, tidyselect,
vctrs
dplyr, rlang, caret, lubridate, poisbinom, stats, tidyr, utils
Rcpp (>= 0.12.9), MASS, magrittr, rrpack, glmnet,
RcppParallel, mpath
ggplot2, grid, gridExtra, scales, gtable,
PerformanceAnalytics, lattice, knitr, xtable, reshape2
scales, gtable, knitr, xtable, reshape2, testthat, dplyr,
readr (>= 0.2.2), lazyeval
scales, gtable, knitr, xtable, reshape2, testthat
scales, gtable, knitr, xtable, reshape2, dplyr, Cairo, readr
(>= 0.2.2), lazyeval, PopED, magrittr, rlang, purrr, tibble,
rmarkdown, tidyr, ggplot2 (>= 2.0.0), grid, gridExtra (>=
2.0.0), grDevices, stats, bookdown
dplyr, tidyr, Hmisc, lubridate, measurements
RNetCDF, chron, foreach, doMC, abind, plotrix, raster,
RColorBrewer, JBTools
RNetCDF, chron, parallel, abind, plotrix, raster,
RColorBrewer, JBTools
RNetCDF, ncmeta, sf, dplyr, methods, stars
dplyr, rlang, RNetCDF, tibble, stats, tidyr
leidenAlg, energy, psych, stats, igraph, Matrix, visNetwork
dplyr, MASS, psych, stats, stringr, tidycensus, tidyr
dplyr, MASS, Matrix, psych, sf, stats, stringr, tidycensus,
tidyr
bayestestR, pROC, MBESS, ez, BayesFactor, Exact, ggplot2,
grDevices, stats, graphics
viridis, fBasics, data.table, bayestestR, pROC, MBESS, car,
ez, Exact, BayesFactor, ggplot2, ggpubr, logspline, grDevices,
stats, graphics
bayestestR, pROC, MBESS, ez, BayesFactor, Exact, ggplot2,
logspline, grDevices, stats, graphics
PoweR, plyr, bayestestR, pROC, MBESS, car, ez, BayesFactor,
Exact, ggplot2, ggpubr, logspline, grDevices, stats, graphics
viridis, PoweR, plyr, bayestestR, pROC, MBESS, car, ez,
BayesFactor, Exact, ggplot2, ggpubr, logspline, grDevices,
stats, graphics
viridis, fBasics, plyr, bayestestR, pROC, MBESS, car, ez,
BayesFactor, Exact, ggplot2, ggpubr, logspline, grDevices,
stats, graphics
igraph, stats, heatmaply, pvclust, ggplot2, dendextend,
plotly, knitr, flexdashboard
igraph, stats, heatmaply, pvclust, ggplot2, dendextend
igraph, heatmaply, pvclust, ggplot2, dendextend
igraph, heatmaply, ConsensusClusterPlus, ggplot2, grDevices,
dplyr
Rcpp (>= 1.0.7), nloptr, MASS, stats, Matrix, methods, utils,
Rfast, trust
methods, utils, rtweet, randomForest, stringr, SnowballC,
SparseM, tau, tm
DescTools, lavaan, WRS2, ggplot2, nptest, dplyr
DescTools, lavaan, WRS2, ggplot2, nptest, dplyr, fungible,
rockchalk
DescTools, lavaan, WRS2, ggplot2, nptest, dplyr, fungible,
rockchalk, MBESS, tidyr
attempt, data.table, glue, httr, igraph, jsonlite, magrittr,
purrr, R6, rlang, rstudioapi, shiny, tibble, tidyr, tidyselect,
utils
dplyr(>= 0.7.1), gdata(>= 2.18), httr, jsonlite, downloader,
data.table, utils, stats, devtools
dplyr(>= 0.7.1), gdata(>= 2.18), httr, jsonlite, downloader,
data.table, utils, stats, lubridate, readr, tidyr
dplyr(>= 0.7.1), gdata(>= 2.18), httr, jsonlite, downloader,
data.table, utils, stats, lubridate, readr, tidyr, rhdf5
dplyr(>= 0.7.1), gdata(>= 2.18), httr, jsonlite, downloader,
data.table, utils, stats, lubridate, readr, tidyr, stringr,
pbapply, parallel, plyr
dplyr(>= 0.7.1), gdata(>= 2.18), httr, jsonlite, downloader,
data.table, utils, stats, lubridate, readr, tidyr, stringr,
pbapply, parallel, plyr, curl
dplyr(>= 0.7.1), httr, jsonlite, downloader, data.table,
utils, stats, lubridate, readr, tidyr, stringr, pbapply,
parallel, plyr, curl
dplyr(>= 0.7.1), httr, jsonlite, downloader, data.table,
utils, R.utils, stats, lubridate, readr, tidyr, stringr,
pbapply, parallel, plyr, curl
dplyr(>= 0.7.1), httr, jsonlite, downloader, data.table,
utils, R.utils, stats, readr, tidyr, stringr, pbapply,
parallel, curl
dplyr(>= 0.7.1), httr, jsonlite, downloader, data.table,
utils, R.utils, stats, tidyr, stringr, pbapply, parallel, curl
httr, jsonlite, downloader, data.table, utils, R.utils, stats,
tidyr, stringr, pbapply, parallel, curl
httr, jsonlite, rappdirs, progress, vroom, utils, curl,
openssl, tibble, stats, zip
httr, jsonlite, rappdirs, progress, vroom, utils, curl,
openssl, tibble, stats, zip, digest
httr, jsonlite, rappdirs, progress, vroom, utils, curl,
openssl, tibble, stats, zip, digest, R.utils, tools
DBI, duckdb, vroom, rappdirs, httr, R.utils, zip, jsonlite,
curl, openssl, tibble, digest, progress, stats, tools, utils
DBI, duckdb, vroom, rappdirs, httr, R.utils, zip, jsonlite,
curl, openssl, tibble, digest, progress, tools, utils
DBI, duckdb (>= 0.2.3), vroom, httr, R.utils, zip, jsonlite,
tibble, progress, tools, utils, thor
DBI, duckdb (>= 0.2.3), httr, progress, R.utils, tools, thor,
utils, vroom, zip
DBI, duckdb (>= 0.2.3), httr, progress, R.utils, tools, thor,
utils, vroom (>= 1.5.1), zip
plyr, reshape2, jsonlite, httr, xml2, analogue
plyr, reshape2, jsonlite, httr, xml2, analogue, leaflet
plyr, reshape2, jsonlite, httr, xml2, analogue, leaflet, dplyr
Boruta, caret, CORElearn, data.table, glmnet, hsstan,
matrixTests, methods, parallel, pROC, randomForest, RcppEigen,
Rfast
Boruta, caret, CORElearn, data.table, ggplot2, glmnet, hsstan,
matrixTests, methods, parallel, pROC, randomForest, RcppEigen,
Rfast, rlang
Boruta, caret, CORElearn, data.table, doParallel, foreach,
ggplot2, glmnet, hsstan, matrixStats, matrixTests, methods,
parallel, pROC, randomForest, RcppEigen, Rfast, rlang,
SuperLearner
cli, dplyr, forcats, generics, glue, lifecycle, magrittr,
parsnip, purrr, recipes, rlang (>= 0.4.11), rsample, stats,
stringr, tibble, tidyr (> 0.8.99), vctrs
dgof, foreach, pROC, methods, stats, utils
dgof, foreach, pROC (>= 1.9), methods, stats, utils
dgof, parallel, pROC (>= 1.9), methods, stats, utils
R.utils, XML, data.table, dplyr, jsonlite, plyr, stringr
data.table, graph, magrittr, Matrix, methods, utils
AnnotationDbi, Matrix, ROCR, graph, igraph, samr
Rcpp (>= 0.12.17), Matrix, gtools, stringr, stats, igraph
Rcpp (>= 1.0.4), coda, ggplot2, mvtnorm, MASS
clue, expm, igraph, Matrix, pdist, pracma, vegan
stats, dplyr, tibble, clue, expm, igraph, Matrix, pdist,
pracma, vegan, magrittr, foreach, parallel, doParallel, optimx,
GenSA, rlang, ggfortify, ggplot2, ggraph, reshape2
Rcpp (>= 1.0.1), Rdpack, Matrix, MASS, pracma, expm
Rcpp (>= 0.12.1), sna, Matrix, SparseM, methods, grDevices,
graphics, stats, utils, boot
Rcpp (>= 0.12.1), sna, Matrix, SparseM, methods, grDevices,
graphics, stats, utils, boot, igraph
Rcpp (>= 0.12.1), sna, Matrix, MASS, SparseM, methods,
grDevices, graphics, stats, utils, boot, igraph
Rcpp (>= 0.12.1), sna, network, Matrix, MASS, SparseM,
methods, grDevices, graphics, stats, utils, boot, igraph
Rcpp (>= 0.12.1), sna, network, Matrix, MASS, MatchIt,
SparseM, methods, grDevices, graphics, stats, utils, boot,
igraph
Rcpp (>= 0.12.1), sna, network, networkDynamic, Matrix, MASS,
MatchIt, SparseM, methods, grDevices, graphics, stats, utils,
boot, igraph
Rcpp (>= 0.12.1), sna, network, networkDynamic, Matrix, MASS,
MatchIt, SparseM, methods, grDevices, graphics, stats, utils,
boot, igraph, viridis
Rcpp (>= 0.12.1), sna, network, networkDynamic, Matrix, MASS,
MatchIt, SparseM, methods, grDevices, graphics, stats, utils,
boot, igraph, viridisLite
ggplot2, lpSolve, igraph (>= 0.7.1), stringr (>= 0.6.2)
graph, graphite, corpcor, dplyr, glmnet, glassoFast, igraph,
Matrix, msigdbr, quadprog, rlang, magrittr
AnnotationDbi, corpcor, data.table, dplyr, genefilter, graph,
graphite, glmnet, glassoFast, httr, igraph, jsonlite, magrittr,
Matrix, msigdbr, ndexr, org.Hs.eg.db, quadprog, RCy3, reshape2,
rlang, Rcpp (>= 1.0.2)
AnnotationDbi, corpcor, data.table, dplyr, genefilter, graph,
graphite, glmnet, glassoFast, httr, igraph, jsonlite, magrittr,
Matrix, msigdbr, org.Hs.eg.db, quadprog, RCy3, reshape2, rlang,
Rcpp (>= 1.0.2)
methods, glasso, MASS, RBGL, tmvtnorm, ggcorrplot, huge
methods, glasso, MASS, RBGL, huge,tmvtnorm
Matrix, igraph, qtl, parallel, methods, glasso, MASS, RBGL,
huge,tmvtnorm
Matrix(>= 1.4-1), igraph, qtl, parallel, methods, glasso,
MASS, huge,tmvtnorm
ggnetwork, igraph, network, rlang, sf, sna
MASS, btergm, stats, ergm, RSiena, sna, network, ergMargins,
VGAM, plyr, lme4, plm, gam, intergraph
magic, MASS, ggplot2 (>= 3.0.0), metafor
assertive, devtools, dplyr, rappdirs, readr, seqinr, stringr,
testit, tibble
graphics, grDevices, igraph, network, sna, stats
magrittr, Rcpp, Matrix, foreach, methods, stats, grDevices,
graphics
parallel, rootSolve, dtw, WGCNA, minet, Matrix, minerva,
combinat, igraph
dplyr, tidyr, usethis, here, httr, jsonlite, purrr, xml2,
rvest, pbapply
tibble, magrittr, statnet.common (>= 4.4.1), stats
tibble, magrittr, statnet.common (>= 4.5), stats
htmlwidgets (>= 0.3.2), igraph, magrittr
Rcpp (>= 0.12.12), data.table, fastmatch, Matrix
functional, ggplot2, plyr, reshape2, stringr
functional, ggplot2, lazyeval, plyr, reshape2, stringr, dplyr,
surveybootstrap
partykit, qgraph, stats, utils, Matrix, mvtnorm, Formula,
grid, graphics, gridBase
partykit, qgraph, stats, utils, Matrix, mvtnorm, Formula,
grid, graphics, gridBase, reshape2
grid, MASS, grDevices, stats, utils, Deriv
methods, matrixStats, R.utils, graphics, grDevices, stats,
RNifti
methods, abind, matrixStats, R.utils, graphics, grDevices,
stats, RNifti
devtools (>= 1.12.0.9000), utils, methods
digest, httr, utils, xml2 (>= 1.0.0.9001), base64enc
digest, httr, utils, xml2 (>= 1.0.1), base64enc
digest, httr, utils, xml2 (>= 1.0.1), base64enc, aws.s3
Matrix, yaImpute, Rcpp, stringr, hash, iterators, abind,
assertthat, stats, grDevices
Matrix, yaImpute, Rcpp, iterators, abind, assertthat, readr,
rgl
BayesLogit, ggplot2, dplyr, tidyr, magrittr, gridExtra
knitr, oro.nifti, fslr, neurobase, stats
dplyr, tidyr, ggplot2, lme4, psych, ggcorrplot, Hmisc, MuMIn,
png, tm, wordcloud2, BayesFactor, htmlTable, ppcor, stringi,
caret
dplyr, ggplot2, scales, pracma, ggpmisc, cowplot
igraph, Rcpp, tidyr, dplyr, purrr, tibble, forcats, ggplot2,
rlang, magrittr, flipr, cli, withr
devtools, httr, jsonlite, tidyr, xml2, lubridate
devtools, httr, jsonlite, tidyr, xml2, lubridate, askpass
utils, Matrix, quanteda (> 1.3), stringi,
utils, Matrix, quanteda (> 1.4), stringi,
utils, Matrix, quanteda (>= 1.4), stringi,
utils, Matrix, quanteda (>= 2.1), quanteda.textstats, stringi
dplyr, glue, httr, janitor, jsonlite, magrittr, mgcv,
nflfastR, purrr, stringr, tibble, tidyr, tidyselect, xgboost
dplyr, glue, httr, janitor, jsonlite, magrittr, mgcv, nflfastR
(>= 4.0.0), nflreadr, purrr, stringr, tibble, tidyr,
tidyselect, xgboost
dplyr, glue, httr, janitor, jsonlite, lubridate, magrittr,
mgcv, progressr (>= 0.6.0), purrr (>= 0.3.0), stats, rlang,
stringr (>= 1.3.0), tibble (>= 3.0), tidyr (>= 1.0.0),
tidyselect (>= 1.1.0), xgboost (>= 1.1)
cli (>= 1.1.0), crayon (>= 1.3.4), dplyr, glue, gsisdecoder,
httr, janitor, jsonlite, lubridate, magrittr, mgcv, progressr
(>= 0.6.0), purrr (>= 0.3.0), stats, rlang, stringr (>= 1.3.0),
tibble (>= 3.0), tidyr (>= 1.0.0), tidyselect (>= 1.1.0),
usethis (>= 1.6.0), xgboost (>= 1.1)
cli (>= 1.1.0), curl, dplyr, fastrmodels (>= 1.0.1), furrr,
future, glue, janitor, lubridate, lifecycle (>= 0.2.0),
magrittr, mgcv, progressr (>= 0.6.0), rlang, stringr (>=
1.3.0), tibble (>= 3.0), tidyr (>= 1.0.0), tidyselect (>=
1.1.0), usethis (>= 1.6.0), xgboost (>= 1.1)
cli (>= 3.0.0), curl, dplyr, fastrmodels (>= 1.0.1), furrr,
future, glue, janitor, lubridate, lifecycle (>= 0.2.0),
magrittr, mgcv, progressr (>= 0.6.0), rlang, stringr (>=
1.3.0), tibble (>= 3.0), tidyr (>= 1.0.0), tidyselect (>=
1.1.0), xgboost (>= 1.1)
cli (>= 3.0.0), curl, dplyr, fastrmodels (>= 1.0.1), furrr,
future, glue, janitor, lifecycle (>= 0.2.0), mgcv, nflreadr (>=
1.0.0), progressr (>= 0.6.0), rlang (>= 0.4.7), stringr (>=
1.3.0), tibble (>= 3.0), tidyr (>= 1.0.0), tidyselect (>=
1.1.0), xgboost (>= 1.1)
cli (>= 3.0.0), curl, data.table (>= 1.14.0), dplyr,
fastrmodels (>= 1.0.1), furrr, future, glue, janitor, mgcv,
nflreadr (>= 1.2.0), progressr (>= 0.6.0), rlang (>= 0.4.7),
stringr (>= 1.3.0), tibble (>= 3.0), tidyr (>= 1.0.0),
tidyselect (>= 1.1.0), xgboost (>= 1.1)
cli, crayon, curl, dplyr, furrr, future, glue, gsubfn,
magrittr, progressr, purrr, readr, rlang, tibble, tidyr
cli, crayon, curl, dplyr, furrr, future, glue, gsubfn,
magrittr, nflreadr (>= 1.1.3), progressr, purrr, readr, rlang,
tibble, tidyr
httr, RCurl, plyr, rjson, stringr, reshape2, ggplot2, scales
httr, rlang, RCurl, dplyr, cli, tibble, tidyr, rjson, stringr,
ggplot2, scales, xml2, textutils, lifecycle
httr, rlang, RCurl, dplyr (>= 1.0.3), cli, tibble, tidyr,
rjson, stringr, ggplot2, scales, xml2, textutils, lifecycle
httr, rlang, RCurl, dplyr (>= 1.0.3), cli, tibble, tidyr,
rjson, stringr, ggplot2, scales, xml2, textutils
httr, rlang, curl, dplyr (>= 1.0.3), cli, tibble, tidyr,
rjson, stringr, ggplot2, scales, xml2, textutils
stringr (>= 1.2.0), configr (>= 0.3.1), data.table
stringr (>= 1.2.0), stringi, configr (>= 0.3.1), data.table,
future, optparse, parallel
stringr, Hmisc, rvest, magrittr, xml2, plyr
stringr, Hmisc (>= 3.17-1), rvest, magrittr, xml2, plyr
stringr, foreign, rvest, magrittr, xml2, plyr
rappdirs, rgdal, sf, httr, rvest, xml2, foreign, ggplot2,
gdalUtils, rlang, dplyr, curl, units, stringr, memoise, purrr
rappdirs, rgdal, sf, httr, rvest, xml2, foreign, ggplot2,
rlang, dplyr, curl, units, stringr, memoise, purrr
rappdirs, rgdal, sf, httr, rvest, xml2, foreign, ggplot2,
rlang, dplyr, curl, units, stringr, memoise, purrr, digest
dplyr, sf, RANN, units, magrittr, jsonlite, httr, igraph,
xml2, R.utils, utils
dplyr, sf, RANN, units, magrittr, jsonlite, httr, igraph,
xml2, R.utils, utils, tidyr, methods, rosm, prettymapr
dplyr, sf, RANN, units, magrittr, jsonlite, httr, igraph, xml2
dplyr, sf, RANN, units, magrittr, jsonlite, httr, igraph,
xml2, R.utils, utils, tidyr, methods, rosm, prettymapr, fst,
dataRetrieval, rappdirs, zip
dplyr, sf, RANN, units, magrittr, jsonlite, httr, igraph,
xml2, R.utils, utils, tidyr, methods, rosm, prettymapr, fst,
dataRetrieval, tools, zip, pbapply
dplyr, sf, RANN, units, magrittr, jsonlite, httr, xml2,
R.utils, utils, tidyr, methods, rosm, prettymapr, fst,
dataRetrieval, tools, zip, pbapply
dplyr, rlang, sf, RANN, units, magrittr, jsonlite, httr, xml2,
R.utils, utils, tidyr, methods, rosm, prettymapr, fst,
dataRetrieval, tools, zip, pbapply
httr, jsonlite, RSQLite, rvest, DBI, xml2
plyr, utils, stats, survival, gridExtra, assertthat, ggplot2,
grid
utils, stats, gtools, survival, gridExtra, assertthat,
ProjectTemplate, devtools, ggthemes, ggplot2, scales, plyr,
grid
utils, stats, assertthat, ggplot2, ggthemes, scales, gtools,
dplyr, grid, gridExtra,
lubridate, httr, curl, readr, dplyr (>= 1.0.0), stringr,
tidyselect
lubridate, httr, curl, readr, dplyr (>= 1.0.0), stringr,
stringi, tidyselect
limma, MASS, methods, graphics, Biobase, multtest,
RColorBrewer, pamr, randomForest, ROCR, ipred, e1071, kernlab
stats, chk, term (>= 0.1.0), coda, abind, purrr
stats, chk, term (>= 0.1.0), coda, abind, purrr, universals
stats, chk, term (>= 0.2.0), coda, abind, purrr, generics,
tibble, universals, extras, lifecycle
stats, chk, term, coda, abind, purrr, generics, tibble,
universals, extras, lifecycle
abind, chk, coda, extras, generics, lifecycle, purrr, stats,
term, tibble, universals
dplyr, nlraa, sqldf, ggplot2, graphics, lcmm, saemix, Rmisc,
sitar, stats, knitr
dplyr, tidyr, quantreg, optimx, ggplot2, timeDate, plyr, Rcpp
quantreg, optimx, ggplot2, Rcpp, timeDate
Rcpp (>= 0.12.3), brew, lattice, parallel, lbfgs, inline,
dparser, methods, ggplot2, memoise, rex, minqa, Matrix,
numDeriv, R.utils, mvtnorm, n1qn1
Rcpp (>= 0.12.3), brew, lattice, parallel, lbfgs, inline,
dparser, methods, ggplot2, memoise, rex, minqa, Matrix,
numDeriv, R.utils, mvtnorm, n1qn1, PreciseSums
Rcpp (>= 0.12.3), brew, lattice, parallel, lbfgs, inline,
dparser, methods, ggplot2, memoise, rex, minqa, Matrix,
numDeriv, R.utils, mvtnorm, n1qn1, PreciseSums, fastGHQuad,
crayon, cli, RcppArmadillo (>= 0.5.600.2.0), vpc (>= 1.0.0)
Rcpp (>= 0.12.3), brew, lattice, parallel, lbfgs, dparser,
methods, ggplot2, memoise, rex, minqa, Matrix, numDeriv,
R.utils, n1qn1, PreciseSums, fastGHQuad, crayon, cli,
RcppArmadillo (>= 0.5.600.2.0), vpc (>= 1.0.0), RxODE(>=
0.7.2-3), nlme, magrittr
Rcpp (>= 0.12.3), brew, lattice, parallel, lbfgs, dparser,
methods, ggplot2, memoise, rex, minqa, Matrix, numDeriv,
R.utils, n1qn1, PreciseSums, fastGHQuad, crayon, cli,
RcppArmadillo (>= 0.5.600.2.0), vpc (>= 1.0.0), RxODE(>=
0.8.0-4), nlme, magrittr, tidyr
Rcpp (>= 0.12.3), brew, lattice, parallel, lbfgs, dparser,
methods, ggplot2, memoise, rex, minqa, Matrix, R.utils, n1qn1,
fastGHQuad, crayon, cli, RcppArmadillo (>= 0.5.600.2.0), vpc
(>= 1.0.0), RxODE(>= 0.9.0-6), nlme, magrittr, tidyr, sys,
generics, huxtable, digest, flextable, stringr, yaml
Rcpp (>= 0.12.3), brew, lattice, parallel, lbfgs, dparser,
methods, ggplot2, memoise, rex, minqa, Matrix, R.utils, n1qn1,
fastGHQuad, crayon, cli, RcppArmadillo (>= 0.5.600.2.0), vpc
(>= 1.0.0), RxODE(>= 0.9.1-0), nlme, magrittr, tidyr, sys,
generics, huxtable, digest, flextable, stringr, yaml
Rcpp (>= 0.12.3), brew, lattice, parallel, lbfgs, dparser,
methods, ggplot2, memoise, rex, minqa, Matrix, R.utils, n1qn1,
fastGHQuad, crayon, cli, RcppArmadillo (>= 0.5.600.2.0), vpc
(>= 1.0.0), RxODE(>= 0.9.1-7), nlme, magrittr, tidyr, sys,
generics, huxtable, digest, flextable, stringr, yaml
Rcpp (>= 0.12.3), brew, lattice, parallel, lbfgs, dparser,
methods, ggplot2, memoise, rex, minqa, Matrix, n1qn1,
fastGHQuad, crayon, cli, RcppArmadillo (>= 0.5.600.2.0), vpc
(>= 1.0.0), RxODE(>= 0.9.1-9), nlme, magrittr, tidyr, sys,
generics, huxtable, digest, flextable, stringr, yaml
Rcpp (>= 0.12.3), brew, parallel, methods, ggplot2, memoise,
Matrix, n1qn1, fastGHQuad, cli, RcppArmadillo (>= 0.5.600.2.0),
vpc (>= 1.0.0), RxODE(>= 0.9.1-9), nlme, magrittr, tidyr,
generics, huxtable, flextable, stringr, yaml
Rcpp (>= 0.12.3), brew, parallel, methods, ggplot2, memoise,
Matrix, n1qn1, fastGHQuad, cli, RcppArmadillo (>= 0.5.600.2.0),
RxODE(>= 0.9.1-9), nlme, magrittr, tidyr, generics, flextable,
stringr, yaml
Rcpp (>= 0.12.3), brew, parallel, lbfgsb3c, dparser, methods,
ggplot2, memoise, rex, minqa, Matrix, n1qn1 (>= 6.0.1-10),
fastGHQuad, RxODE(>= 1.0.6), nlme, magrittr, sys, backports,
symengine
Rcpp (>= 0.12.3), brew, parallel, lbfgsb3c, dparser, methods,
ggplot2, rex, minqa, Matrix, n1qn1 (>= 6.0.1-10), fastGHQuad,
RxODE(>= 1.0.6), nlme, magrittr, backports, symengine
Rcpp (>= 0.12.3), brew, parallel, lbfgsb3c, dparser, methods,
ggplot2, rex, minqa, Matrix, n1qn1 (>= 6.0.1-10), fastGHQuad,
RxODE(>= 1.1.5), nlme, magrittr, backports, symengine
nlmixr2est, nlmixr2extra, rxode2, nlmixr2plot, magrittr
nlmixr2est (>= 2.1.1), nlmixr2extra, rxode2 (>= 2.0.10),
lotri, nlmixr2plot, magrittr
Rcpp (>= 0.12.3), lbfgsb3c, dparser, methods, rex, minqa,
Matrix, n1qn1 (>= 6.0.1-10), rxode2(>= 1.0.0), nlme, magrittr,
backports, symengine
Rcpp (>= 0.12.3), lbfgsb3c, dparser, methods, rex, minqa,
Matrix, n1qn1 (>= 6.0.1-10), rxode2(>= 2.0.7), nlme, magrittr,
backports, symengine
backports, checkmate, cli, graphics, knitr, lbfgsb3c, lotri,
magrittr, Matrix, methods, minqa, n1qn1 (>= 6.0.1-10), nlme,
Rcpp, rex, Rvmmin, rxode2 (>= 2.0.7), stats, symengine, ucminf,
utils, vpc
backports, checkmate, cli, graphics, knitr, lbfgsb3c, lotri,
magrittr, Matrix, methods, minqa, n1qn1 (>= 6.0.1-10), nlme,
Rcpp, rex, Rvmmin, rxode2 (>= 2.0.10), stats, symengine,
ucminf, utils, vpc
checkmate, cli, crayon, data.table, digest, ggplot2, ggtext,
lotri, nlme, nlmixr2est, Rcpp, rxode2, stats, symengine, utils
checkmate, cli (>= 3.4.0), crayon, data.table, digest,
ggplot2, ggtext, lotri, nlme, nlmixr2est (>= 2.1.0), Rcpp,
rxode2 (>= 2.0.7), stats, symengine, utils
checkmate, cli (>= 3.4.0), crayon, data.table, digest,
ggplot2, ggtext, lotri, nlme, nlmixr2est (>= 2.1.1), Rcpp,
rxode2 (>= 2.0.10), stats, symengine, utils
checkmate, cli, methods, rxode2, nlmixr2est
ggplot2, nlmixr2est, nlmixr2extra, rxode2, utils, vpc, xgxr
utils, lqmm, HI, mvtnorm, MASS, numDeriv, statmod, stats,
Matrix, Qtools, Rcpp (>= 0.12.13)
TSP, igraph, fdrtool, coin, methods, graphics, stats
ROCR, TSP, igraph, fdrtool, coin, methods, graphics, stats,
earth, randomForest, e1071
stats, utils, SuperLearner, cvAUC, ROCR, Rdpack, bde, np,
assertthat
MASS,nlme, robcor, TSA,tseries,stats, GA, quantreg
boot, knitr, MASS, Matrix, mgcv, nlme, stats
XML, lhs, sensitivity, dplyr, readr, purrr, furrr, magrittr,
stats, utils, GenSA, genalg, raster, rstudioapi, sf, tidyr,
methods, tibble, igraph, stringr
XML, lhs, sensitivity, dplyr, readr, purrr, furrr, magrittr,
stats, utils, GenSA, genalg, raster, rstudioapi, sf, tidyr,
methods, tibble, crayon, igraph, stringr, EasyABC
XML, lhs, sensitivity, dplyr, readr, purrr, furrr, magrittr,
stats, utils, GenSA, genalg, raster, rstudioapi, sf, tidyr,
methods, tibble, crayon, igraph, stringr, progressr, EasyABC
nnls, grid, gridExtra, gtable, Matrix, ggplot2
plyr, dplyr, d3heatmap, mixtools, tidyr, capushe
Rcpp (>= 0.11.4), Matrix, SparseM, stats, stringr, tools,
utils
Rdpack, AER, mlogit, Hmisc, stats, gsubfn, abind, tidyr, plyr,
dplyr
Rcpp (>= 0.12.7), reticulate, R6, Matrix
Rcpp (>= 0.12.7), reticulate, R6, Matrix, KernelKnn, utils
methods, fields, rTensor, plot3D, tagcloud
methods, fields, rTensor, plot3D, tagcloud, ggplot2
methods, MASS, fields, rTensor, plot3D, tagcloud, ggplot2
dplyr, furrr, tidyr, igraph, ggplot2, cluster, rlang, mgcv,
stats, formula.tools, mice
crul (>= 0.1.0), jsonlite (>= 1.1), tibble (>= 1.2),
data.table, fauxpas
glmnet, neuralnet, plotrix, MASS, tsutils, uroot
forecast, glmnet, neuralnet, plotrix, MASS, tsutils, uroot,
methods
geosphere, RANN, units, lwgeom, Rcpp, sp, methods
RANN, units, Rcpp, sp, methods, lwgeom, DBI, RPostgreSQL
RANN, units, Rcpp, sp, methods, lwgeom, stars, raster, igraph
RANN, units, methods, lwgeom, parallel, s2
nabor, units, methods, lwgeom, parallel, s2
nabor, units, methods, lwgeom, parallel, s2, data.table
nabor, units, methods, parallel, data.table
MASS, stats, graphics, pcds, Rdpack (>= 0.7)
R6, hash, digest, assertthat, purrr, dplyr, magrittr, crayon,
rlang, stringr
DBI (>= 0.7), methods, paws, stats, utils
data.table, DBI (>= 0.7), methods, paws (>= 0.1.5), stats,
utils
data.table (>= 1.12.4), DBI (>= 0.7), methods, paws (>=
0.1.5), stats, utils
data.table (>= 1.12.4), DBI (>= 0.7), methods, paws (>=
0.1.5), stats, utils, uuid
stringi, jsonlite, jsonify, uuid, jqr, sofa (>= 0.3.0),
elastic (>= 1.0.0), mongolite (>= 1.6), RSQLite (>= 2.2.4), DBI
stringi, jsonlite, jsonify, uuid, jqr, sofa (>= 0.3.0),
elastic (>= 1.0.0), mongolite (>= 1.6), RSQLite (>= 2.2.4),
RPostgres, DBI
stringi, jsonlite, jsonify, uuid, jqr, DBI
data.table, igraph, word2vec, rlist, dplyr, vctrs, vegan
RPANDA, nLTT, apTreeshape, phangorn, tibble, DDD, Rmpfr,
assertthat, pbapply, phylobase, stringr, geiger, ape, testit,
babette, beautier, beastier, mauricer, tracerer, rappdirs
RPANDA, nLTT, apTreeshape, phangorn, tibble, DDD, Rmpfr,
assertthat, pbapply, phylobase, geiger, ape, babette, beautier,
beastier, mauricer, tracerer, rappdirs, testit, stringr
apTreeshape, phangorn, tibble, DDD, Rmpfr, assertthat,
pbapply, phylobase, geiger, babette, beautier, beastier,
mauricer, tracerer, rappdirs, testit, stringr
nLTT, RPANDA, apTreeshape, phangorn, tibble, DDD, Rmpfr,
assertthat, pbapply, phylobase, rappdirs, stringr, geiger, ape,
testit, babette, beautier, beastier, mauricer, tracerer
caret, nnet, e1071, FNN, classInt, ggplot2, ExtDist, lsr,
stringr, RColorBrewer, RSNNS, C50
utils, grDevices, tibble, dplyr,magrittr, ggplot2,
preprocessCore, IRanges, GenomicRanges, Rsamtools, philentropy,
doParallel, foreach
utils, grDevices, tibble, dplyr, magrittr, ggplot2,
preprocessCore, IRanges, GenomicRanges, Rsamtools, philentropy,
doParallel, foreach
jsonlite, tibble, readr, dplyr, httr, utils
jsonlite, tibble, readr, dplyr, httr, utils, rsdmx, rlang
jsonlite, tibble, readr, dplyr, httr, utils, rsdmx, rlang,
snakecase
jsonlite, tibble, dplyr, httr, utils, rsdmx, rlang, snakecase
htmlwidgets, png, webshot, lifecycle, rlang
caret (>= 6.0.78), dplyr, randomForest, ggplot2, rlist (>=
0.4.6.1), glmnet, tidyverse, e1071, purrr, pROC (>= 1.13.0),
rlang (<= 0.3.0.1),
caret (>= 6.0.78), dplyr, randomForest, ggplot2, rlist (>=
0.4.6.1), glmnet, tidyverse, e1071, purrr, pROC (>= 1.13.0),
rlang (>= 0.2.1),
methods, CondIndTests, data.tree, caTools, randomForest
Matrix, rgl, tseries, zoo, Rcpp (>= 0.12.12), graphics, stats
Matrix, tseries, zoo, Rcpp (>= 0.12.12), graphics, stats,
lifecycle
Matrix, rgl, tseries, TSA, zoo, Rcpp (>= 0.12.12), graphics,
stats
mvtnorm, lattice, latticeExtra, MASS, splines2
mvtnorm, lattice, latticeExtra, MASS, splines2, reshape2
dplyr, tidyr, xml2, encode, csv, fold, spec, lazyeval,
metaplot, magrittr
dplyr (>= 0.7.1), tidyr, xml2, encode, csv, fold (>= 0.2.1),
spec, lazyeval, metaplot (>= 0.1.4), magrittr, rlang
dplyr (>= 0.7.1), tidyr, xml2, encode, csv, spec, lazyeval,
metaplot (>= 0.1.4), magrittr, rlang
CompQuadForm, mvtnorm, lavaan (>= 0.5-20), sandwich
CompQuadForm, mvtnorm, lavaan (>= 0.5-21), sandwich
CompQuadForm, mvtnorm, lavaan (>= 0.5-23.1097), sandwich
CompQuadForm, mvtnorm, lavaan (>= 0.6-3), sandwich
CompQuadForm, mvtnorm, lavaan (>= 0.6-6), sandwich
methods, Matrix (>= 1.1.5), parallel, stats
data.table (>= 1.14.0), odbc, DBI, magrittr, RSQLite, writexl,
httr, jsonlite
data.table (>= 1.14.0), odbc, DBI, magrittr, RSQLite, writexl,
httr, jsonlite, vcr, progressr
MASS, parallel, purrr, magrittr, ddR, shiny
MASS, parallel, purrr, magrittr, rlang, shiny
forecast, nortest, ggplot2, gridExtra, tseries, uroot, MASS,
zoo
RCurl, httr, DBI, RMySQL, matlab, stringr, seasonal, corpcor,
zoo, xts
corpcor, httr, lubridate, matlab, RCurl, xts, zoo
corpcor, httr, lubridate, matlab, RCurl, xts, zoo, DBI, magic,
RMySQL, Matrix
corpcor, httr, lubridate, matlab, RCurl, xts, zoo, DBI, magic,
RMySQL, Matrix, vars, stats
boot, cubature, methods, quadprog, quantreg, stats
boot, cubature, methods, quantreg, stats
matrixStats, matrixcalc, MASS, gtools, Formula, methods, stats
Benchmarking, np, quadprog, Rglpk, splines
Benchmarking, np, quadprog, Rglpk (>= 0.6-2), splines
dfoptim, nnet, randomForest, e1071, magrittr, MASS,
smotefamily, rpart, foreach, naivebayes, caret, formatR
methods, scales, mclust, testthat, rlang
methods, scales, ggplot2, mclust, grid, gridExtra, testthat,
rlang
methods, scales, ggplot2, mclust, grid, gridExtra, rlang
stats, graphics, mvtnorm, ggplot2, muhaz, survival, multcomp
checkLuhn, checkmate, curl, dplyr, glue, httr, magrittr,
purrr, rlang, stringr, tibble, tidyr, utils
assertthat, crayon, cli, erratum (>= 2.2.0)
methods, graphics, stats, rgdal, lubridate, rts, snow
methods, graphics, stats, rgdal, lubridate, snow
anytime, futile.logger, htmlTable, lubridate, Matrix, plotrix,
readxl, Rlabkey, shiny, shinyBS, stringi, utils, WriteXLS
anytime, futile.logger, htmlTable, lubridate, Matrix, plotrix,
readxl, Rlabkey, rlang, shiny, stringi, utils, WriteXLS
graphics, stats, utils, shiny, ggplot2, gridExtra
graphics, stats, utils, shiny, ggplot2, gridExtra, doParallel,
foreach, mgcv, sfsmisc, shinyjs, wesanderson
graphics, stats, utils, shiny, doParallel, foreach, mgcv,
sfsmisc, shinyjs, wesanderson, ggplot2
glmnet, e1071, randomForest, MASS, parallel, ada, stats,
graphics
glmnet, e1071, randomForest, MASS, parallel, ada, stats,
graphics, ROCR, tree
glmnet, e1071, randomForest, naivebayes, MASS, parallel, ada,
stats, graphics, ROCR, tree
stats, methods, utils, graphics, sde, survival
Rcpp (>= 0.12.0), coda, mcmc, np, sandwich, sapa, mcmcse
Rcpp (>= 0.12.0), coda, mcmc, mcmcse, np, sandwich
httr, jsonlite, magrittr, purrr, rvest, shiny, stringr,
tibble, utils, xml2
httr, jsonlite, magrittr, rvest, utils, xml2
stats, utils, readr, magrittr, rvest, tidyverse, stringr,
jsonlite
stats, utils, readr, magrittr, rvest, tidyverse, stringr,
jsonlite, RSelenium, haven
stats, utils, readr, magrittr, rvest, tidyverse, stringr,
jsonlite, RSelenium, googleVis, gt, scales, dplyr
stats, utils, readr, magrittr, rvest, tidyverse, stringr,
jsonlite, RSelenium, googleVis, dplyr, lubridate, purrr
stats, utils, readr, magrittr, rvest, tidyverse, stringr,
jsonlite, RSelenium, googleVis, dplyr, lubridate, purrr, curl
stats, utils, readr, magrittr, rvest, tidyverse, stringr,
jsonlite, RSelenium, googleVis, dplyr, lubridate, purrr, httr,
curl
httr, jsonlite, tools, digest, stats, utils
assertthat (>= 0.2.1), copCAR, ghyp, Matrix, mvtnorm, pracma,
stats, zoo
MASS, tidyverse, rlang, moments, fpc, tsibble, forecast,
ggplot2, dplyr, purrr, tidyr, tibble, magrittr
MASS, rlang, moments, fpc, tsibble, forecast, ggplot2, dplyr,
purrr, tidyr, tibble, magrittr, viridis
ape, argparse, caTools, data.table, dendextend, dplyr,
GenomicRanges, ggplot2, ggraph, ggtree, glue, igraph, IRanges,
logger, magrittr, methods, parallel, parallelDist, patchwork,
pryr, purrr, Rcpp, RcppParallel, RhpcBLASctl, R.utils,
reshape2, scales, stats4, stringr, tibble, tidygraph, tidyr,
tidyverse, vcfR, zoo
ape, caTools, data.table, dendextend, dplyr, GenomicRanges,
ggplot2, ggraph, ggtree, glue, igraph, IRanges, logger,
magrittr, methods, optparse, parallel, parallelDist, patchwork,
pryr, purrr, Rcpp, RhpcBLASctl, R.utils, scales, scistreer (>=
1.0.1), stats4, stringr, tibble, tidygraph, tidyr, tidyverse,
vcfR, zoo
Rcpp (>= 1.0.7), pedtools, ribd, partitions, methods
Matrix, igraph, parallel, methods, glasso, huge, tmvtnorm
httr, stringr, testthat, tibble, tidyr, tidyselect, ggplot2,
dplyr, jsonlite, qpdf
stats, methods, qrng, Matrix, copula, pcaPP
stats, methods, qrng, Matrix, copula, pcaPP, ADGofTest
stats, methods, qrng, Matrix, copula, pcaPP, ADGofTest,
mnormt, pracma
chron, curl, httr, jsonlite, stringr, utils, xml2
curl, httr, rlang, stringi, tidyr, utils, xml2
jsonlite, httr, stringr, utils, rstudioapi
Rcpp, methods, stats, grDevices, ape, geosphere, ggplot2,
magrittr, visNetwork, data.table, outbreaker2
Rcpp, methods, stats, grDevices, geosphere, ggplot2,
visNetwork, data.table, outbreaker2
Rcpp (>= 1.0.7), dplyr, magrittr, parallel, ggplot2, ggrepel,
methods, stats
dplyr, stringr, tm, tibble, tidytext, topicmodels, rmarkdown,
xlsx, knitr
bazar, foreach, purrr, R6, rlist, rstudioapi, stats
foreach, purrr, R6, rlang, rlist, rstudioapi, stats
neurobase, fslr (>= 2.0), methods, stats, parallel, oro.nifti,
mmand
neurobase, fslr (>= 2.13), methods, stats, parallel,
oro.nifti, mmand
Formula, ggplot2, reshape2, methods, stats
Rfast, stats, matrixStats, stringr, readr, tibble, crayon
Rcpp, pec, data.table, stats, missForest, purrr, glmnet,
survival, dplyr, rlang, prodlim, ggthemes, tidyr, ggplot2,
scales
bazar, bit, dplyr, lazyeval, magrittr, tibble, utils
RefManageR, bib2df, BIEN, bit64, dplyr, ape, lubridate,
methods, rgbif (>= 3.1), taxize, stringr, knitr, stats,
leaflet, htmltools, ggplot2, rlang, magrittr, tidyr,
RPostgreSQL, DBI, waffle
bib2df, BIEN, bit64, dplyr, ape, lubridate, methods, rgbif (>=
3.1), taxize, stringr, knitr, stats, leaflet, htmltools,
ggplot2, rlang, magrittr, tidyr, RPostgreSQL, DBI, waffle
bib2df, BIEN, bit64, dplyr, lubridate, methods, rgbif (>=
3.1), taxize, stringr, stats, leaflet, htmltools, ggplot2,
rlang, tidyr, RPostgreSQL, RColorBrewer, viridis, DBI, waffle
bib2df, BIEN, dplyr, lubridate, methods, rgbif (>= 3.1),
taxize, stringr, stats, leaflet, htmltools, ggplot2, rlang,
tidyr, RPostgreSQL, RColorBrewer, viridis, DBI, waffle
bib2df, BIEN, dplyr, lubridate, methods, rgbif (>= 3.1),
taxize, stringr, stats, leaflet, htmltools, ggplot2, rlang,
httr, tidyr, RPostgreSQL, RColorBrewer, viridis, DBI, waffle
bib2df, BIEN, curl, dplyr, lubridate, methods, rgbif (>= 3.1),
taxize, stringr, stats, leaflet, htmltools, ggplot2, rlang,
httr, tidyr, RPostgreSQL, RColorBrewer, viridis, DBI, waffle
raster, data.table, rgeos, rgdal, biogeo, stringr, alphahull,
plyr, sp, sf, methods, stats, utils, outliers,
CoordinateCleaner, tictoc, rgbif, countrycode, rnaturalearth,
svMisc, spocc, tidyverse, rnaturalearthdata, pingr, ggplot2,
DT, Matrix, dplyr, graphics, dataPreparation
sf, sp, rgdal, broom, rgeos, ggplot2, maps, spData
abind, fields, marmap, plotrix, methods, utils, grDevices,
maptools, sp, ncdf4, stats
abind, fields, plotrix, methods, utils, grDevices, maptools,
sp, ncdf4, stats, lubridate
R6, openssl, curl,httr, jsonlite, XML, keyring
mgcv, MASS, stats, ggplot2 (>= 2.2.0), cowplot
mgcv, MASS, stats, ggplot2 (>= 3.0.0), cowplot
ggplot2 (>= 3.0.0), mgcv, stats, stringr, tibble
pcaPP, stats, ggplot2, ks, MASS, RcppRoll, mgcv, moments ,
RColorBrewer, mvtsplot, tibble, reshape, dplyr, graphics,
tidyr, kernlab, magrittr
deSolve, magrittr, stats, dplyr, zoo, tidyr
R6, cinterpolate (>= 1.0.0), crayon, deSolve, digest,
jsonlite, ring
R6, cinterpolate (>= 1.0.0), deSolve, digest, glue, jsonlite,
ring, withr
glue, httr, utils, data.table, methods, jsonlite
methods, Rcpp (>= 0.12.7), gdpc, forecast
methods, Rcpp (>= 0.12.7), forecast, parallel, doParallel,
foreach
methods, Rcpp (>= 0.12.7), forecast, parallel, doParallel,
foreach, MASS
rlang, magrittr, dplyr, purrr, curl, jsonlite, readr
rlang, magrittr, dplyr, stringr, purrr, curl, jsonlite, readr
Rcpp (>= 0.11.0), Matrix, foreach, methods
knitr, rmarkdown, bookdown (>= 0.13), officer (>= 0.3.11),
xml2, rlang, uuid, grDevices, yaml, utils, memoise, rvg (>=
0.2.2)
knitr, rmarkdown, officer (>= 0.3.12), xml2, rlang, uuid,
grDevices, yaml, utils, memoise, rvg (>= 0.2.2)
knitr, rmarkdown, officer (>= 0.3.15), xml2, rlang, uuid,
grDevices, yaml, utils, memoise, rvg (>= 0.2.2)
knitr, rmarkdown, officer (>= 0.3.18), xml2, rlang, uuid,
grDevices, yaml, utils, memoise, rvg (>= 0.2.2)
knitr, rmarkdown, officer (>= 0.4.1), xml2, rlang, uuid,
grDevices, yaml, utils, memoise, rvg (>= 0.2.2)
Rcpp (>= 0.12.3), purrr,dplyr,R6,tibble,lazyeval,
R.utils,utils,grDevices, gdtools, base64enc, digest, magrittr,
xml2 (>= 1.1.0)
Rcpp (>= 0.12.3), purrr,dplyr,R6,tibble,lazyeval,ggplot2,
R.utils,utils,grDevices, gdtools, base64enc, digest, magrittr,
xml2 (>= 1.1.0)
Rcpp (>= 0.12.3), purrr,dplyr,R6,tibble,lazyeval,ggplot2,
R.utils,utils,grDevices, gdtools, base64enc,zip, digest,uuid,
magrittr, xml2 (>= 1.1.0), magick
Rcpp (>= 0.12.3), purrr,dplyr,R6,tibble,lazyeval,ggplot2,
R.utils,utils,grDevices, gdtools, base64enc,zip, digest,uuid,
magrittr, xml2 (>= 1.1.0)
Rcpp (>= 0.12.3), purrr,dplyr,R6,tibble,ggplot2,
R.utils,utils,grDevices, gdtools, base64enc,zip, digest,uuid,
magrittr,htmltools, xml2 (>= 1.1.0)
Rcpp (>= 0.12.12), purrr,dplyr,R6,tibble,ggplot2,
R.utils,utils,grDevices, base64enc,zip, digest,uuid,
magrittr,htmltools, xml2 (>= 1.1.0)
Rcpp (>= 0.12.12), R6,R.utils,grDevices, base64enc,zip,
digest,uuid, magrittr,htmltools, xml2 (>= 1.1.0)
Rcpp (>= 0.12.12), R6,R.utils,grDevices, base64enc, zip,
digest,uuid,utils, magrittr,htmltools, xml2 (>= 1.1.0)
Rcpp (>= 0.12.12), R6,R.utils,grDevices, base64enc, zip,
digest,uuid,utils,stats, magrittr,htmltools, xml2 (>= 1.1.0)
Rcpp (>= 0.12.12), R6, grDevices, base64enc, zip,
digest,uuid,utils,stats, magrittr,htmltools, xml2 (>= 1.1.0)
R6, grDevices, zip (>= 2.0.3), uuid,stats, magrittr,utils,
xml2 (>= 1.1.0), graphics
R6, grDevices, zip (>= 2.1.0), uuid,stats, magrittr,utils,
xml2 (>= 1.1.0), graphics
R6, grDevices, zip (>= 2.1.0), uuid (>= 0.1-4), stats,
magrittr, utils, xml2 (>= 1.1.0), graphics
R6, grDevices, stats, graphics, utils, zip (>= 2.1.0), uuid
(>= 0.1-4), xml2 (>= 1.1.0)
Rcpp (>= 0.12.12), R6, grDevices, base64enc, zip (>= 2.0.0),
digest,uuid,stats, magrittr,htmltools,rlang, xml2 (>= 1.1.0)
Rcpp (>= 0.12.12), R6, grDevices, base64enc, zip (>= 2.0.3),
digest,uuid,stats, magrittr,htmltools,rlang (>= 0.4.0), xml2
(>= 1.1.0)
R6, grDevices, zip (>= 2.0.3), digest,uuid,stats,
magrittr,utils, xml2 (>= 1.1.0), graphics
graphics, utils, stats, methods, Rcpp (>= 1.0.1)
Rcpp (>= 0.12.3), maxLik, magrittr, methods, dplyr
dplyr (>= 0.8.3), magrittr, oai, rvest, stringr, tidyr (>=
1.0), urltools, utils, xml2, purrr, rlang
dplyr (>= 0.8.3), magrittr, rvest, tidyr (>= 1.0), urltools,
xml2, purrr, rlang
ggplot2, gridExtra, graphics, dplyr, magrittr, purrr, tibble,
tidyr, nortest, goftest, Rcpp
dplyr, ggplot2, goftest, graphics, gridExtra, magrittr,
nortest, purrr, Rcpp, shiny, tibble, tidyr, stringr, recipes,
glue, rlang
cli, clisymbols, crayon, dplyr, ggplot2, gh, glue, goftest,
graphics, gridExtra, magrittr, nortest, purrr, Rcpp, recipes,
rlang, shiny, stringr, tibble, tidyr
car, checkmate, cli, clisymbols, crayon, dplyr, ggplot2, gh,
glue, goftest, graphics, gridExtra, magrittr, nortest, purrr,
Rcpp, recipes, rlang, shiny, stringr, tibble, tidyr
car, checkmate, cli, clisymbols, crayon, dplyr, ggplot2, gh,
glue, goftest, graphics, gridExtra, magrittr, nortest, purrr,
Rcpp, recipes (>= 0.1.4), rlang, shiny, stringr, tibble, tidyr
car, data.table, ggplot2, goftest, graphics, gridExtra,
nortest, Rcpp, stats, utils
broom, data.table, dplyr, ff, glmnet, magrittr, MASS,
matrixStats, parallel, PCDimension, ridge, rlang, R.utils, sva,
tidyr
broom, data.table, dplyr, ff, glmnet, magrittr, MASS,
matrixStats, parallel, PCDimension, rlang, sva, tidyr
broom, data.table, dplyr, ff, glmnet, magrittr, MASS,
matrixStats, parallel, purrr, rlang, tidyr
dplyr, lazyeval, progress, Rcpp (>= 0.12.12), Matrix
lazyeval, progress, rlang (>= 0.2.0), methods, data.table,
Rcpp (>= 0.12.12), Matrix
lazyeval, rlang (>= 0.2.0), listcomp (>= 0.4.0), methods,
data.table, Matrix, fastmap
ROI (>= 0.3.0), slam, methods, Matrix, ompr (>= 0.7.0)
ROI (>= 0.3.0), slam, methods, Matrix, ompr (>= 0.8.0)
ROI (>= 0.3.0), slam, methods, Matrix, ompr (>= 1.0.0)
ROI (>= 0.3.0), slam, methods, Matrix, ompr (>= 1.0.1)
plyr, dplyr, stringr, KEGGREST, reshape2, ggfortify, ggplot2,
magrittr, tidyr
plyr, dplyr, stringr, httr, reshape2, ggfortify, ggplot2,
magrittr, tidyr, broom, FSA, rstatix, randomForest, caret
plyr, dplyr, stringr, httr, ggfortify, ggplot2, magrittr,
tidyr, broom, FSA, rstatix, randomForest, caret
rhdf5, hms, zlibbioc, tidyr (>= 0.8.0), readr, dplyr, purrr,
magrittr, rlang
dplyr, flextable, ggplot2, magrittr, officer (>= 0.3.7),
stringr, rlang, yaml
anytime, httr, methods, humanize, lubridate, stringi, tictoc,
crayon, utils, testthat
parallel, ridge, car, glmnet, pls, sva, preprocessCore,
GenomicFeatures, org.Hs.eg.db,
TxDb.Hsapiens.UCSC.hg19.knownGene, maftools, genefilter, gdata,
tidyverse, readxl, TCGAbiolinks, BiocGenerics, GenomicRanges,
IRanges, S4Vectors
parallel, ridge, car, glmnet, pls, sva, preprocessCore,
GenomicFeatures, genefilter, gdata, tidyverse, readxl,
BiocGenerics, GenomicRanges, IRanges, S4Vectors, org.Hs.eg.db,
TxDb.Hsapiens.UCSC.hg19.knownGene, maftools
readr, methods, magrittr, rhdf5, data.table, Matrix, Rcpp,
crayon, dplyr
R6, glue, safer, magrittr, jsonlite, tibble
ggplot2 (>= 2.2.1), plotly (>= 4.7.1), reshape2 (>= 1.4.1),
Rcpp (>= 0.10.5), graphics, methods, stats, utils, grDevices,
MDSMap
ggplot2 (>= 2.2.1), plotly (>= 4.7.1), reshape2 (>= 1.4.1),
Rcpp (>= 0.10.5), graphics, methods, stats, utils, grDevices,
smacof, princurve, parallel, dplyr, tidyr, htmlwidgets, ggpubr,
RColorBrewer, dendextend, rebus, vcfR (>= 1.6.0)
ggplot2 (>= 2.2.1), plotly (>= 4.7.1), reshape2 (>= 1.4.1),
Rcpp (>= 0.10.5), graphics, methods, stats, utils, grDevices,
smacof, princurve, parallel, dplyr, tidyr, htmlwidgets, ggpubr,
RColorBrewer, dendextend, rebus, vcfR (>= 1.6.0), stringi
rlang, httr, dplyr, purrr, stringr, tidyr, future, furrr
stats, moments, car, ggplot2, nortest, graphics, utils
ggplot2, spatstat.core, spatstat.geom, spatstat.random, stats
ggplot2, spatstat.explore, spatstat.geom, spatstat.random,
stats
shinydashboard, pbapply, stringr, utils, stats, dplyr, plyr,
sunburstR, usethis
checkmate, dplyr, magrittr, purrr, readr, rlang, stringr,
tibble, tidyr, tidyselect
checkmate, dplyr, httr, magrittr, methods, purrr, readr,
rlang, stringr, tibble, tidyr, tidyselect, rdflib
ontologyIndex, Rgraphviz, methods, functional, magrittr
stm, purrr, tibble, shiny, miniUI, text2vec (>= 0.6), digest,
R6, quanteda, irr, ggplot2, cowplot, dplyr, stats, utils
keyATM (>= 0.2.2), purrr, tibble, shiny, miniUI, text2vec (>=
0.6), digest, R6, quanteda (>= 3.0.0), irr, ggplot2, cowplot,
dplyr, cli, stats, utils
keyATM (>= 0.2.2), purrr, tibble, shiny, digest, R6, quanteda
(>= 3.0.0), irr, ggplot2, cowplot, cli, stats, utils
methods, graphics, grDevices, stats, cluster
AdaptGauss, DataVisualizations, DistributionOptimization,
cluster, mixtools, grDevices, methods, foreach, stats, utils,
rlang, ggplot2, parallel, caTools, dplyr, mclust, mixAK,
multimode, NbClust, ClusterR, doParallel
caTools, twosamples, pracma, parallel, pbmcapply, methods,
stats
parallel, graphics, methods, stats, caTools, pracma,
twosamples, utils, pbmcapply, benchmarkme
parallel, graphics, methods, stats, caTools, pracma,
twosamples, utils, benchmarkme, memuse, doParallel, foreach
utils, MASS, nlme, parallel, stats, Rcpp (>= 0.12.14),
stringr, plyr, abind, methods
utils, MASS, nlme, parallel, stats, Rcpp (>= 0.12.14),
stringr, plyr, abind, methods, RcppParallel, R2ucare
utils, MASS, nlme, parallel, stats, Rcpp (>= 0.12.14),
stringr, plyr, abind, methods, RcppParallel
utils, MASS, nlme, parallel, stats, Rcpp (>= 0.12.14),
stringr, plyr, abind, methods, RcppParallel (>= 5.1.1)
abind, MASS, methods, nlme, parallel, plyr, Rcpp (>= 0.12.14),
RcppParallel (>= 5.1.1), stats, stringr, utils
methods, progress, rgdal, sp, raster, SSN
methods, progress, rgdal, sf, sp, raster, SSN
httr, xml2, ggmap, ggplot2, magick, utils, stats, R6, dbscan
httr, ssh, xml2, ggmap, ggplot2, magick, utils, stats, R6,
dbscan, cluster
InterVA5 (>= 1.0.1), InSilicoVA (>= 1.1.3), InterVA4 (>=
1.7.3), Tariff (>= 1.0.1), ggplot2, crayon, cli, methods
InterVA5 (>= 1.0.1), InSilicoVA (>= 1.1.3), InterVA4 (>=
1.7.3), Tariff (>= 1.0.1), ggplot2, crayon, cli, purrr
InterVA5 (>= 1.0.1), InSilicoVA (>= 1.1.3), InterVA4 (>=
1.7.3), Tariff (>= 1.0.1), ggplot2, crayon, cli
proto, grid, plyr, reshape, mgcv, zoo, lattice,
boot,RColorBrewer, tcltk
proto, grid, plyr, reshape, mgcv, zoo, lattice,
boot,RColorBrewer
proto, grid, plyr, reshape2, mgcv, zoo, lattice, boot,
RColorBrewer
proto, Matrix, utils, grid, plyr, reshape2, mgcv, zoo,
lattice, boot,RColorBrewer
proto, Matrix, utils, grid, plyr, reshape2, mgcv, zoo,
lattice, cluster, boot, RColorBrewer
Matrix, utils, grid, plyr, reshape2, mgcv, lattice, cluster,
boot, RColorBrewer
Matrix, utils, grid, plyr, reshape2, mgcv, lattice, cluster,
boot, Rcpp, RColorBrewer
Matrix, utils, grid, plyr, reshape2, mgcv, lattice, cluster,
Rcpp, RColorBrewer
Matrix, utils, grid, plyr, reshape2, mgcv, lattice,
latticeExtra, cluster, Rcpp, RColorBrewer
utils, grid, plyr, reshape2, mgcv, lattice, latticeExtra,
cluster, RColorBrewer
utils, grid, plyr, reshape2, mgcv, lattice, latticeExtra,
cluster, RColorBrewer, Rcpp
utils, grid, plyr, reshape2, mgcv, lattice, latticeExtra,
cluster, RColorBrewer, mapdata, mapproj, hexbin, RgoogleMaps,
Rcpp
utils, grid, plyr, reshape2, mgcv, lattice, latticeExtra,
cluster, RColorBrewer, mapproj, hexbin, maps, mapdata,
RgoogleMaps, Rcpp
utils, grid, plyr, reshape2, mgcv, lattice, latticeExtra,
cluster, RColorBrewer, mapproj, hexbin, mapdata, RgoogleMaps,
Rcpp
grid, plyr, reshape2, mgcv, lattice, latticeExtra, cluster,
RColorBrewer, mapproj, hexbin, mapdata, RgoogleMaps, Rcpp,
grDevices, graphics, methods, stats, utils
grid, plyr, lazyeval, dplyr, reshape2, mgcv, lattice,
latticeExtra, lubridate, cluster, RColorBrewer, mapproj,
hexbin, mapdata, RgoogleMaps, Rcpp, grDevices, graphics,
methods, stats, utils
grid, plyr, lazyeval, dplyr, reshape2, mgcv, lattice,
latticeExtra, lubridate, cluster, RColorBrewer, mapproj,
hexbin, mapdata, Rcpp, grDevices, graphics, methods, stats,
utils
grid, plyr, lazyeval, dplyr, reshape2, mgcv, lattice,
latticeExtra, lubridate, cluster, RColorBrewer, mapproj,
hexbin, Rcpp, grDevices, graphics, methods, stats, MASS, utils
grid, dplyr (>= 1.0), purrr, tidyr, readr, mgcv, lattice,
latticeExtra, lubridate, cluster, mapproj, hexbin, Rcpp,
grDevices, graphics, methods, stats, MASS, utils
grid, dplyr (>= 1.0), purrr, tidyr, readr, mgcv, lattice,
latticeExtra, lubridate, cluster, mapproj, hexbin, Rcpp,
grDevices, graphics, methods, stats, MASS, utils, rlang
grid, rlang, dplyr, purrr, tidyr, mgcv, lattice, latticeExtra,
lubridate, cluster, RColorBrewer, mapproj, hexbin, Rcpp,
grDevices, graphics, methods, stats, MASS, utils
grid, rlang, dplyr, purrr, tidyr, mgcv, lattice, latticeExtra,
lubridate, cluster, mapproj, hexbin, Rcpp, grDevices, graphics,
methods, stats, MASS, utils
grid, rlang, dplyr, purrr, tidyr, readr, mgcv, lattice,
latticeExtra, lubridate, cluster, mapproj, hexbin, Rcpp,
grDevices, graphics, methods, stats, MASS, utils
grid, rlang, dplyr (>= 1.0), purrr, tidyr, readr, mgcv,
lattice, latticeExtra, lubridate, cluster, mapproj, hexbin,
Rcpp, grDevices, graphics, methods, stats, MASS, utils
openair, dplyr, leaflet, purrr, magrittr, rlang, lubridate,
tibble, stringr, forcats
openair, dplyr, leaflet, purrr, magrittr, rlang, lubridate,
tibble, stringr, forcats, tidyr, cli
openair, dplyr, leaflet, purrr, magrittr, rlang, lubridate,
tibble, stringr, forcats, tidyr, cli, tidyselect
dplyr, httr, jsonlite, magrittr, progress, tibble,
httr, httpcode, jsonlite, dplyr, magrittr, tidyr, glue
parallel, tools, stats, evaluate (>= 0.4.7), httpuv (>= 1.1),
knitr (>= 1.4), RJSONIO, devtools, httr, brew, pander
parallel, tools, stats, evaluate (>= 0.5.1), httpuv (>= 1.1),
knitr (>= 1.4), RJSONIO, devtools, httr, brew, pander
parallel, tools, stats, evaluate (>= 0.5.1), httpuv (>= 1.1),
knitr (>= 1.4), jsonlite (>= 0.9.1), devtools, httr, brew,
pander
parallel, tools, stats, evaluate (>= 0.5.1), httpuv (>= 1.1),
knitr (>= 1.4), jsonlite (>= 0.9.3), devtools, httr, brew,
pander
parallel, tools, stats, evaluate (>= 0.5.1), httpuv (>= 1.1),
knitr (>= 1.4), jsonlite (>= 0.9.4), devtools, httr, brew,
pander
parallel, tools, stats, evaluate (>= 0.5.1), httpuv (>= 1.1),
knitr (>= 1.4), jsonlite (>= 0.9.5), devtools (>= 1.5), httr
(>= 0.3), brew, pander
parallel, tools, stats, evaluate (>= 0.5.1), httpuv (>= 1.3),
knitr (>= 1.4), jsonlite (>= 0.9.7), devtools (>= 1.5), httr
(>= 0.3), brew, pander
parallel, tools, stats, evaluate (>= 0.5.1), httpuv (>= 1.3),
knitr (>= 1.4), jsonlite (>= 0.9.8), devtools (>= 1.5), httr
(>= 0.3), brew, pander
parallel, tools, stats, evaluate (>= 0.5.1), httpuv (>= 1.3),
knitr (>= 1.4), jsonlite (>= 0.9.9), devtools (>= 1.5), httr
(>= 0.3), brew, pander
parallel, tools, stats, evaluate (>= 0.5.1), httpuv (>= 1.3),
knitr (>= 1.6), jsonlite (>= 0.9.13), devtools (>= 1.6.1), httr
(>= 0.3), brew, pander, openssl
parallel, tools, stats, evaluate (>= 0.5.1), httpuv (>= 1.3),
knitr (>= 1.6), jsonlite (>= 0.9.14), devtools (>= 1.6.1), httr
(>= 0.3), brew, openssl
parallel, tools, stats, evaluate (>= 0.5.1), httpuv (>= 1.3),
knitr (>= 1.6), jsonlite (>= 0.9.14), devtools (>= 1.9.1), httr
(>= 0.3), brew, openssl
evaluate (>= 0.5.1), httpuv (>= 1.3), knitr (>= 1.6), jsonlite
(>= 0.9.14), devtools (>= 1.9.1), httr (>= 0.3), protolite,
brew, openssl
evaluate (>= 0.10), httpuv (>= 1.3), knitr (>= 1.6), jsonlite
(>= 1.4), devtools (>= 1.12), sys (>= 1.3), webutils (>= 0.5),
curl (>= 2.5), sendmailR, rappdirs, zip, mime, protolite, brew,
openssl, pander
evaluate (>= 0.10.1), httpuv (>= 1.3), knitr (>= 1.6),
jsonlite (>= 1.4), devtools (>= 1.12), sys (>= 1.4), webutils
(>= 0.6), curl (>= 2.6), sendmailR, rappdirs, zip, mime,
protolite, brew, openssl
evaluate (>= 0.10.1), httpuv (>= 1.3), knitr (>= 1.6),
jsonlite (>= 1.4), devtools (>= 1.12), sys (>= 1.6), webutils
(>= 0.6), curl (>= 2.6), sendmailR, rappdirs, zip, mime,
protolite, brew, openssl
evaluate (>= 0.10), httpuv (>= 1.3), knitr (>= 1.6), jsonlite
(>= 1.4), devtools (>= 1.12), sys (>= 1.3), webutils (>= 0.5),
curl (>= 2.5), rappdirs, zip, mime, protolite, brew, openssl,
pander
evaluate (>= 0.12), httpuv (>= 1.3), knitr (>= 1.6), jsonlite
(>= 1.4), remotes (>= 2.0.2), sys (>= 2.1), webutils (>= 0.6),
curl (>= 2.6), sendmailR, rappdirs, zip, mime, protolite, brew,
openssl
evaluate (>= 0.12), httpuv (>= 1.3), knitr (>= 1.6), jsonlite
(>= 1.4), remotes (>= 2.0.2), sys (>= 2.1), webutils (>= 0.6),
curl (>= 4.0), rappdirs, zip, mime, protolite, brew, openssl
ckanr (>= 0.4.0), geojsonsf, magrittr, readxl, sf, tibble,
xml2
ckanr (>= 0.4.0), magrittr, readxl, sf, tibble, xml2
ckanr (>= 0.4.0), magrittr, readxl, sf, tibble, xml2, curl
ckanr (>= 0.6.0), magrittr, readxl, sf, tibble, xml2, curl
jsonlite, httr, methods, R6, lubridate, base64enc
jsonlite, httr2 (>= 0.2.0), methods, R6, lubridate, base64enc,
sf, IRdisplay, htmltools, rlang
jsonlite, httr2 (>= 0.2.2), methods, R6, lubridate, base64enc,
sf, IRdisplay, htmltools, rlang
ggplot2 (>= 2.2.1), graphics, rmarkdown, tibble
ggplot2 (>= 2.2.1), graphics, readr, rmarkdown, tibble
dplyr, httr, digest, lazyeval, readr, purrr, magrittr
plyr, maptools, openair, raster, rgdal, reshape, doParallel,
parallel, foreach, sp
checkmate, dplyr, geodist, googlePolylines, httr, jsonlite,
pbapply, sf
checkmate, dplyr (>= 1.0.0), geodist, googlePolylines, httr,
jsonlite, pbapply, sf (>= 0.9.3)
checkmate, dplyr (>= 1.0.0), geodist, googlePolylines, httr,
jsonlite, pbapply, vctrs (>= 0.3.1), sf (>= 0.9.3)
checkmate, data.table, tibble, geodist, googlePolylines, curl,
rjson, RcppSimdJson (>= 0.1.2), pbapply, lubridate, sf (>=
0.9.3), sfheaders
checkmate, data.table, geodist, googlePolylines, curl, rjson,
pbapply, lubridate, sf (>= 0.9.3), sfheaders, tibble
checkmate, data.table, geodist, googlePolylines, curl, rjson,
pbapply, lubridate, sf (>= 0.9.3), sfheaders
anytime (>= 0.3.0), dplyr, foreach, httr, leaflet, magrittr,
readr
methods, Rcpp (>= 0.11.1), grDevices, stats, utils
methods, Rcpp, grDevices, stats, utils, zip
grDevices, methods, Rcpp, stats, stringi, utils, zip, rlang
(>= 0.1.2)
grDevices, methods, Rcpp, stats, utils, zip, stringi
grDevices, methods, Rcpp, stats, stringi, utils, zip
R6, Rcpp, grDevices, magrittr, stringi, utils, zip
Rcpp, htmltools, rAmCharts, htmlwidgets, pipeR, alabama,
methods, Rdpack
ggplot2, tibble, tidytext, magrittr, dplyr, stringr, purrr,
tidyr, likert, cowplot
ggplot2, tibble, tidytext, magrittr, dplyr, stringr, purrr,
tidyr, likert, tm, wordcloud2, forcats, cowplot
methods, lattice, parallel, boot, hwriter, plotrix,
Ckmeans.1d.dp, pkgutils (>= 0.3-0), yaml (>= 2.1.7), splines,
mgcv, grofit (>= 1.1), rjson (>= 0.2.12)
methods, lattice, boot, hwriter, plotrix
methods, lattice, boot, hwriter, plotrix, pkgutils,
Ckmeans.1d.dp
methods, lattice, boot, hwriter, plotrix, pkgutils (>= 0.3-0),
Ckmeans.1d.dp, yaml (>= 2.1.5)
methods, lattice, parallel, boot, hwriter, plotrix,
Ckmeans.1d.dp, pkgutils (>= 0.3-0), yaml (>= 2.1.5), splines,
mgcv, grofit (>= 1.1), rjson (>= 0.2.12)
methods, lattice, parallel, boot, hwriter, plotrix,
Ckmeans.1d.dp, pkgutils (>= 0.5-0), yaml (>= 2.1.7), splines,
mgcv, grofit (>= 1.1), rjson (>= 0.2.12), nlme
methods, lattice, parallel, boot, hwriter, plotrix,
Ckmeans.1d.dp, pkgutils (>= 0.6.0), yaml (>= 2.1.7), splines,
mgcv, grofit (>= 1.1), rjson (>= 0.2.12), nlme, DBI
MASS, randomForest, e1071,ipred, msm, Matrix
MASS, randomForest, e1071,ipred, msm, rgl, Matrix
clValid, RankAggreg, mclust, methods, cluster, gplots,
kohonen, MBCluster.Seq
grDevices, graphics, stats, utils, clValid, RankAggreg,
mclust, methods, cluster, gplots, kohonen, MBCluster.Seq
grDevices, graphics, stats, utils, RankAggreg, mclust,
methods, cluster, gplots, kohonen, MBCluster.Seq,
ggplot2, purrr, rlang, crayon, cli, magrittr, dplyr, nleqslv,
shiny, DT, shinydashboard, shinyalert, plotly, hrbrthemes,
shinyjs, nloptr, orthopolynom
ggplot2, purrr, rlang, crayon, cli, magrittr, dplyr, nleqslv,
shiny, DT, shinydashboard, shinyalert, plotly, hrbrthemes,
shinyjs, orthopolynom
ggplot2, purrr, rlang, crayon, cli, dplyr, nleqslv, shiny,
utils
data.table, ggplot2, AUC, grid, knitr, plyr, scales, stringr,
XML
data.table (>= 1.9.6), ggplot2, AUC, grid, knitr, plyr,
scales, stringr, XML
AUC, data.table (>= 1.9.6), ggplot2, grid, knitr, scales,
stringr, XML
GENLIB, Matrix, Rcsdp, alabama, cccp, kinship2, nadiv, nloptr,
pedigree, pspline, stringr, MASS, methods, stats
Matrix, plyr, Rcsdp, alabama, cccp, kinship2, nadiv, nloptr,
pedigree, pspline, stringr, MASS, methods, stats, graphics,
quadprog, data.table, Rcpp (>= 0.12.4)
Matrix, plyr, Rcsdp, alabama, cccp, kinship2, nadiv, nloptr,
pedigree, pspline, stringr, MASS, methods, stats, graphics,
quadprog, data.table, magic, Rcpp (>= 0.12.4)
Matrix, plyr, Rcsdp, alabama, cccp, kinship2, nadiv, nloptr,
pedigree, pspline, stringr, MASS, methods, stats, graphics,
quadprog, data.table, magic, parallel, doParallel, foreach,
Rcpp (>= 0.12.4)
Matrix, plyr, Rcsdp, alabama, cccp, kinship2, nadiv, nloptr,
pedigree, pspline, stringr, MASS, methods, stats, graphics,
quadprog, data.table, magic, parallel, doParallel, foreach,
ECOSolveR, Rcpp (>= 0.12.4)
Matrix, plyr, Rcsdp, alabama, cccp, kinship2, nadiv, nloptr,
pedigree, pspline, stringr, MASS, methods, stats, graphics,
quadprog, data.table, magic, parallel, doParallel, foreach,
Rsymphony, Rcpp (>= 0.12.4)
Matrix, plyr, kinship2, nadiv, pedigree, pspline, stringr,
MASS, methods, stats, graphics, quadprog, data.table, magic,
parallel, doParallel, foreach, ECOSolveR, optiSolve, Rcpp (>=
0.12.4)
Matrix, plyr, kinship2, nadiv, pedigree, pspline, stringr,
MASS, methods, stats, purrr, graphics, quadprog, data.table,
magic, parallel, doParallel, foreach, ECOSolveR, reshape2,
optiSolve, Rcpp (>= 0.12.4)
Matrix, shapes, alabama, cccp, nloptr, MASS, methods, plyr,
stringr, stats, Rcpp (>= 0.12.4)
Matrix, shapes, Rcsdp, alabama, cccp, nloptr, MASS, methods,
plyr, stringr, stats, Rcpp (>= 0.12.4)
MASS, pscl, betareg, ResourceSelection (>= 0.3-0), parallel,
mefa4
MASS, pscl, betareg, ResourceSelection (>= 0.3-2), parallel,
mefa4
ars, rjags, HDInterval, mgcv, utils, coda, grDevices, methods,
stats, graphics
optextras, numDeriv, setRNG, Rvmmin, Rcgmin
stats, methods, mvabund (>= 3.1), ordinal (>= 2015.1-21)
numDeriv, ucminf, BB, Rcgmin, Rvmmin, minqa, setRNG, dfoptim,
svUnit
rootSolve, distances, weights, boot, lattice, pbapply, Hmisc,
stats, graphics
Rcpp, stats, methods, graphics, rlemon, survey
Rcpp, RItools, digest, stats, methods, graphics
Rcpp, RItools, digest, stats, methods, graphics, survey
Rcpp, RItools, digest, stats, methods, graphics, survey (>=
4.1-1)
DBI, R6, RSQLite, digest, docopt, fs (>= 1.2.7), ids, withr,
yaml, zip (>= 2.0.0)
DBI, R6, RSQLite (>= 2.2.4), crayon, digest, docopt, fs (>=
1.2.7), gert, ids, withr, yaml, zip (>= 2.0.0)
Rcpp (>= 0.12.11), RcppProgress (>= 0.1), methods
Rcpp (>= 0.11.2), combinat, ggplot2, nnet
Rcpp (>= 0.11.2), combinat, nnet, verification
coda, devtools, dclone, runjags, DESeq2, SummarizedExperiment
rlang, stringr, tidyselect, scales, generics, magrittr,
tibble, broom, tidyr, dplyr, purrr, labeling, ggrepel,
rlang, stringr, tidyselect, scales, generics, magrittr,
tibble, tidyr, dplyr, purrr, labeling, ggrepel,
ggplot2, ranger, Rcpp, stats, utils, xtable
fs, here, readr, rlang, rstudioapi, stringr
abind, methods, data.table, future, listenv
abind, methods, data.table, future, future.apply, listenv
abind, methods, data.table, assertthat, future, future.apply,
listenv
stats, httr (>= 1.1.0), jsonlite (>= 0.9.19), data.table,
xml2, taxize
crul, jsonlite, data.table, xml2, taxize (>= 0.9.0)
grDevices, graphics, knitr, rmarkdown, stats
stats, bitops, splines, graphics, grDevices, methods, utils,
abind, RNifti (>= 0.9.0)
stats, bitops, splines, graphics, grDevices, methods, utils,
abind, RNifti (>= 0.9.0), rticles
bitops, splines, graphics, grDevices, methods, utils
bitops, splines, graphics, grDevices, methods, utils, abind
stats, bitops, splines, graphics, grDevices, methods, utils,
abind
stats, bitops, splines, graphics, grDevices, methods, utils,
abind, RNifti
grDevices, methods, oro.dicom (>= 0.3.7), oro.nifti (>=
0.3.9), utils
grDevices, methods, oro.dicom (>= 0.4.0), oro.nifti (>=
0.4.0), utils, minpack.lm, msm
methods, oro.dicom (>= 0.4.0), oro.nifti (>= 0.4.0), utils,
minpack.lm, msm
Rcpp (>= 0.12.12), survival, pracma, plot3D, rgl
Rcpp (>= 0.12.12), survival, dr, pracma, plot3D, rgl, MASS
Rcpp (>= 1.0.9), survival, dr, pracma, plot3D, rgl, MASS
graphics, grDevices, hamlet, Matrix, methods, stats, survival,
utils
crul (>= 0.7.4), jsonlite, stringi, purrr, tibble, rlang, fs
(>= 1.3.0), memoise, httr
crul (>= 0.7.4), jsonlite, stringi, purrr, tibble (>= 3.0.0),
rlang, fs (>= 1.3.0), memoise, httr
curl, httr, lubridate, methods, Rcpp (>= 0.12.4), rvest,
jsonlite, sp, utils, xml2
curl, httr, lubridate, magrittr, methods, Rcpp (>= 0.12.4),
rvest, jsonlite, sp, tibble, utils, xml2
curl, httr, lubridate, magrittr, methods, Rcpp (>= 0.12.4),
rvest, jsonlite, sp, utils, xml2
curl, httr2, lubridate, magrittr, methods, Rcpp (>= 0.12.4),
reproj, rvest, sp, tibble, utils, xml2
curl, httr, jsonlite, lubridate, magrittr, methods, Rcpp (>=
0.12.4), rvest, sp, tibble, utils, xml2
curl, httr, jsonlite, lubridate, magrittr, methods, Rcpp (>=
0.12.4), reproj, rvest, sp, tibble, utils, xml2
sf (>= 0.8.1), utils, tools, httr, jsonlite
dplyr, geoR, graphics, mapview, nngeo, osmdata, pdist,
processx, rgdal, sp, splancs, stats, qpdf, Rcpp, tibble, sf,
methods
graphics, grDevices, rlist, stats, stringr, utils
graphics, grDevices, rlist, stats, knitr, rmarkdown, stringr,
utils, ncdf4, mgcv, rappdirs, fields
graphics, grDevices, rlist, stats, knitr, rmarkdown, stringr,
utils, ncdf4, mgcv, fields
ggm, igraph, methods, osmar, RCurl, rgeos, sp, spatstat, XML,
ggm, igraph, methods, osmar, rgeos, RCurl, sp, spatstat, XML,
ggm, igraph, httr, methods, osmar, rgeos, sp, spatstat, XML,
ggm, ggplot2, igraph, httr, methods, osmar, rgeos, sp,
spatstat, XML
curl, ggm, ggplot2, igraph, httr, methods, osmar, rgeos, sp,
spatstat, XML
curl, e1071, ggm, ggplot2, httr, methods, osmdata, rgeos, sp,
spatstat
curl, e1071, ggm, ggplot2, httr, mapproj, methods, osmdata,
rgeos, sp, spatstat
e1071, ggm, ggplot2, mapproj, methods, osmdata, rgeos, sp,
spatstat (>= 2.0-0), spatstat.core, spatstat.geom
jsonlite, sp, RCurl, XML, reshape2, utils
jsonlite, sp, RCurl, utils, stats, bitops, rgeos, methods,
gepaf, raster
jsonlite, sp, RCurl, utils, stats, rgeos, methods, gepaf,
raster
jsonlite, RCurl, utils, stats, rgeos, methods, gepaf, raster
jsonlite, RCurl, utils, stats, rgeos, methods, gepaf, raster,
sp
jsonlite, RCurl, utils, stats, lwgeom, isoband, methods,
gepaf, sp, sf
jsonlite, RCurl, utils, stats, isoband, methods, gepaf, sp, sf
jsonlite, curl, utils, stats, isoband, methods,
googlePolylines, sp, sf
jsonlite, curl, utils, stats, isoband, methods,
googlePolylines, sf
RcppSimdJson, curl, utils, mapiso, googlePolylines, sf
assertthat, bitops, rjson, R.utils, stringr
checkmate, httr, janitor, jsonlite, geojsonsf
checkmate, httr, geojsonsf, janitor, jsonlite, sf
checkmate, httr, geojsonsf, janitor, jsonlite, sf, urltools
checkmate, httr, geojsonsf, janitor, jsonlite, sf, urltools,
dplyr, rrapply, rlang
stats, graphics, grDevices, mclust, prabclus
stats, utils, graphics, grDevices, mclust, parallel, foreach,
doParallel
stats, utils, graphics, grDevices, mvtnorm, parallel, foreach,
doParallel, robustbase, mclust
stats, ggplot2, plotly, sigmoid, reticulate
yaml, testthat, jsonlite, pryr, R6, zip, methods
dplyr, httr, fs, rmarkdown (>= 2.10), xml2, rvest, readr,
R.utils, bookdown, glue, curl, rprojroot, magrittr, yaml,
stringr, knitr (>= 1.33), purrr
googledrive, dplyr, httr, fs, jsonlite, rmarkdown (>= 2.10),
xml2, rvest, readr, R.utils, bookdown, glue, curl, rprojroot,
magrittr, yaml, stringr, knitr (>= 1.33), qpdf, purrr
methods, stats, graphics, grDevices, utils, subplex
stats, graphics, FNN, ranger, missRanger (>= 2.1.0)
ranger, FNN, graphics, stats, missRanger (>= 2.1.0)
utils, stats, graphics, grDevices, ape, igraph, adegenet
utils, methods, stats, grDevices, Rcpp, ape, ggplot2,
magrittr, visNetwork
magrittr, reshape2, sandwich, stats, stringr, tidyr, utils
outsider.base, remotes (>= 2.0), crayon, jsonlite, tibble,
curl, yaml
utils (>= 3.1), crayon, devtools (>= 1.1), pkgload, sys (>=
2.1), yaml (>= 2.0), callr (>= 3.0.0), tibble, cli
stats, ape, coda, Sim.DiffProc, MCMCpack, abc, phytools, nlme,
TreeSim, adephylo, maps, geiger, EasyABC, utils
tibble, dplyr, httr, jsonlite, ckanr, data.table, rlang,
magrittr
tibble, dplyr, httr, jsonlite, data.table, magrittr
dplyr, rvest, readr, leaflet, stringr, ggplot2, sf, magrittr,
forcats, jsonlite, htmltools, purrr, xml2, curl, ggrepel,
scales, rlang, grDevices
dplyr, rvest, readr, leaflet, stringr, ggplot2, sf, magrittr,
forcats, jsonlite, htmltools, purrr, xml2, curl, ggrepel,
scales, rlang, grDevices, httr
dplyr, rvest, readr, leaflet, stringr, ggplot2, sf, magrittr,
purrr, forcats, jsonlite, htmltools, xml2, curl, ggrepel,
scales, rlang, grDevices, httr
dplyr, rvest, readr, leaflet, stringr, ggplot2, sf, magrittr,
purrr, forcats, jsonlite, htmltools, xml2, curl, ggrepel,
scales, rlang, grDevices, httr, lifecycle
magrittr, httr, jsonlite, plyr, tibble, tidyr
R6, httr, openssl, XML (>= 3.96-1.1), sf, rgdal
R6, httr, openssl, XML (>= 3.96-1.1), sf, rgdal, parallel
R6, httr, openssl, XML (>= 3.96-1.1), jsonlite, sf, terra,
parallel
methods, R6, httr, openssl, keyring, XML (>= 3.96-1.1),
geometa (>= 0.7-1), sf, terra, parallel
dplyr, jsonlite, tibble, magrittr, tidyr, countrycode, stringr
DBI, RPostgres, dplyr, sf, dbplyr, lubridate, countrycode,
magrittr
cli, dplyr, glue, httr, purrr, rjson, tibble, tidyr, utils
cli, dplyr, glue, httr, jsonlite, purrr, rjson, rlang,
stringr, tibble, tidyr, utils, yaml
Rcpp (>= 1.0.3), matrixStats, RNifti, stats, grDevices,
graphics, plyr, ARIbrain, utils
Rcpp (>= 0.12.13), DiceKriging, pbivnorm, KrigInv, rgenoud,
randtoolbox, pracma, grDevices
dplyr, multtest, ggplot2, permute, randomForest, reshape2,
magrittr
ggplot2, permute, randomForest, reshape2, magrittr
ggplot2, permute, randomForest, reshape2, dplyr(>= 0.4.1),
multtest(>= 2.25.0)
plyr, utils, methods, Rcpp (>= 0.11.1), ggplot2,
data.table, dplyr, gdalUtils, getPass, ggplot2, hdf5r,
lubridate, methods, ncdf4, parallel, raster, rgdal, R.utils,
sp, stats, stringr, utils, viridis, zoo
curl, data.table, dplyr, gdalUtils, getPass, ggplot2, hdf5r,
lubridate, methods, ncdf4, parallel, raster, rgdal, R.utils,
sp, stats, stringr, utils, viridis, zoo
curl, data.table, dplyr, gdalUtils, getPass, ggplot2, hdf5r,
lubridate, maps, methods, ncdf4, parallel, raster, rgdal,
R.utils, sp, stats, stringr, utils, viridis, zoo
curl, data.table, dplyr, getPass, ggplot2, hdf5r, lubridate,
methods, ncdf4, parallel, raster, rgdal, R.utils, sf, sp,
stats, stringr, utils, viridis, zoo
data.table, ggplot2, grDevices, gridExtra, methods, ncdf4,
raster, sf, stats, utils
data.table, ggplot2, ggpubr, grDevices, methods, ncdf4,
parallel, raster, R.utils, sf, stats, utils
grDevices, methods, parallel, stats, utils, data.table,
ggplot2, ggpubr, ncdf4, raster, R.utils, sf
stringr, data.table, reshape2, rlang, stats, lme4, flexsurv,
survminer, SurvRegCensCov, survival, MASS, systemfit,
IPDFileCheck, valueEQ5D, car, ggplot2, grDevices, lmtest,
broom, effects, gvlma, methods, relaimpo, tm
stringr, data.table, reshape2, rlang, stats, lme4, nlme,
flexsurv, survminer, SurvRegCensCov, survival, MASS, systemfit,
IPDFileCheck, valueEQ5D, car, ggplot2, grDevices, lmtest,
broom, effects, gvlma, methods, relaimpo, tm
readxl, stringr, data.table, reshape2, rlang, stats, lme4,
nlme, flexsurv, survminer, SurvRegCensCov, survival, MASS,
systemfit, IPDFileCheck, valueEQ5D, car, ggplot2, grDevices,
lmtest, broom, effects, gvlma, methods, relaimpo, tm,
tidyverse, tibble, dplyr, tidyr, hash
readxl, stringr, data.table, reshape2, rlang, stats, lme4,
nlme, flexsurv, survminer, SurvRegCensCov, survival, MASS,
systemfit, IPDFileCheck, valueEQ5D, car, ggplot2, grDevices,
lmtest, broom, effects, gvlma, methods, relaimpo, tm,
tidyverse, tibble, dplyr, tidyr, hash, haven
DiscriMiner, MASS, parallel, doParallel, foreach, FactoMineR
MASS, parallel, doParallel, foreach, FactoMineR
cranlogs, data.table, ggplot2, memoise, parallel, RCurl
cranlogs, data.table (>= 1.12.2), ggplot2, memoise, RCurl
cranlogs, data.table (>= 1.12.2), ggplot2, grDevices, memoise,
RCurl, rversions, stats
cranlogs, data.table (>= 1.12.2), ggplot2, grDevices, memoise,
pkgsearch, RCurl, R.utils, rversions, stats
cranlogs, data.table (>= 1.12.2), ggplot2, grDevices, memoise,
pkgsearch, RCurl, R.utils, rversions, stats, sugrrants, utils
cranlogs, data.table (>= 1.12.2), ggplot2, grDevices, memoise,
pkgsearch, RCurl, R.utils, rversions, stats, sugrrants, tools,
utils
cranlogs, data.table (>= 1.12.2), ggplot2, grDevices,
ISOcodes, memoise, pkgsearch, RCurl, R.utils, rversions, stats,
sugrrants, tools, utils
crayon, devtools, digest, evaluate, highlight, htmltools,
lazyrmd (>= 0.2.0), magrittr, rmarkdown, stringr, tools,
whisker, yaml
httr, utils, jsonlite, pander, formattable, stringr, tools
httr, utils, jsonlite, pander, formattable, stringr, crayon,
lubridate, tidyr
httr, utils, jsonlite, pander, formattable, stringr, crayon,
lubridate, tidyr, textutils, htmlTable
httr, utils, jsonlite, pander, formattable, stringr, crayon,
lubridate, tidyr, textutils, htmlTable, clipr, shiny,
reactable, shinyjs, shinybusy, rstudioapi
httr, utils, jsonlite, pander, formattable, stringr, crayon,
lubridate, tidyr, textutils, htmlTable, clipr, shiny,
reactable, shinyjs, shinybusy
callr, checkmate, codetools, crayon, cyclocomp, desc,
devtools, fakemake, git2r, httr, methods, pkgbuild, pkgload,
rcmdcheck, remotes, rprojroot, tools, usethis, utils, whisker,
whoami, withr
callr, checkmate, codetools, crayon, cyclocomp, desc, fakemake
(>= 1.10.1), fritools (>= 1.2.0), gert, httr, pkgbuild,
pkgload, rcmdcheck, remotes, rhub, rprojroot, tools, usethis,
whisker, whoami, withr
callr, checkmate, codetools, crayon, cyclocomp, desc, fakemake
(>= 1.10.1), fritools (>= 1.3.0), fs, gert, httr, pkgbuild,
pkgload, rcmdcheck, remotes, rhub, rprojroot, tools, whisker,
whoami
callr, checkmate, codetools, crayon, cyclocomp, desc, fakemake
(>= 1.10.1), fritools (>= 1.4.0), fs, gert, httr, pkgbuild,
pkgload, rcmdcheck, remotes, rhub, rprojroot, tools, whisker,
whoami
callr, checkmate, codetools, crayon, cyclocomp, desc, fakemake
(>= 1.10.1), fritools (>= 1.4.0), fs, gert, httr, pkgbuild,
pkgload, rcmdcheck, remotes, rhub, rprojroot, tinytest, tools,
whisker, whoami
callr, checkmate, codetools, crayon, cyclocomp, desc,
fakemake, git2r, httr, methods, pkgbuild, pkgload, rcmdcheck,
remotes, rprojroot, tools, usethis, utils, whisker, whoami,
withr
callr, checkmate, codetools, crayon, cyclocomp, desc,
fakemake, fs, git2r, httr, methods, pkgbuild, pkgload,
rcmdcheck, remotes, rprojroot, tools, usethis, utils, whisker,
whoami, withr
callr, checkmate, codetools, crayon, cyclocomp, desc,
fakemake, git2r, httr, methods, pkgbuild, pkgload, rcmdcheck,
remotes, rhub, rprojroot, tools, usethis, utils, whisker,
whoami, withr
callr, checkmate, codetools, crayon, cyclocomp, desc, fakemake
(>= 1.10.1), fritools (>= 1.1.0), gert, httr, pkgbuild,
pkgload, rcmdcheck, remotes, rhub, rprojroot, tools, usethis,
whisker, whoami, withr
rappdirs, utils, httr (>= 1.0.0), dplyr (>= 0.4.3)
fs, usethis, jsonlite, htmlwidgets, cli, assertthat,
rprojroot, rstudioapi
fs, cli, usethis, jsonlite, roxygen2, rprojroot, rstudioapi,
assertthat, htmlwidgets
devtools (>= 1.13.0), methods, stats, utils
Rcpp (>= 0.11.4), VineCopula (>= 2.0.5), numDeriv, ggplot2(>=
2.0.0), gridExtra, methods
memoise, stringi, xml2, renv, jsonlite, curl
circlize, e1071, graphics, plotrix, stats, utils
Rcpp, dplyr (>= 0.6.0), lubridate, rlang
Rcpp, dplyr (>= 1.0.0), lubridate, rlang
rmarkdown (>= 1.11), bookdown (>= 0.8), htmltools, xfun
rmarkdown (>= 1.16), bookdown (>= 0.8), htmltools, jsonlite,
later (>= 1.0.0), processx, servr (>= 0.13), httpuv, xfun,
websocket
rmarkdown (>= 1.16), bookdown (>= 0.8), htmltools, jsonlite,
later (>= 1.0.0), processx, servr (>= 0.18), httpuv, xfun,
websocket
rmarkdown (>= 2.8), bookdown (>= 0.8), htmltools, jsonlite,
later (>= 1.0.0), processx, servr (>= 0.23), httpuv, xfun,
websocket
rmarkdown (>= 2.13), bookdown (>= 0.8), htmltools, jsonlite,
later (>= 1.0.0), processx, servr (>= 0.23), httpuv, xfun,
websocket
rmarkdown (>= 1.11), bookdown (>= 0.8), htmltools, jsonlite,
later, processx, servr (>= 0.13), httpuv, xfun
rmarkdown (>= 1.11), bookdown (>= 0.8), htmltools, jsonlite,
later, processx, servr (>= 0.13), httpuv, xfun, websocket
rmarkdown (>= 1.14), bookdown (>= 0.8), htmltools, jsonlite,
later, processx, servr (>= 0.13), httpuv, xfun, websocket
rmarkdown (>= 1.14), bookdown (>= 0.8), htmltools, jsonlite,
later (>= 1.0.0), processx, servr (>= 0.13), httpuv, xfun,
websocket
dendsort, drat, fastcluster, graphics, grDevices, irlba,
magrittr, MASS, mgcv, methods, N2R, parallel, plyr, R.utils,
Rcpp, rjson, rlang, R6, RMTstat, Rook, Rtsne, sccore (>=
0.1.1), stats, urltools, utils
R6, reshape2, vegan, GenomicRanges, BiocGenerics,
shinyWidgets, shinydashboard, DT, plotly, magrittr, heatmaply,
dendextend, ggfortify, shiny
graphics, stats, coin, boot, mratios, binMto, MASS, mcprofile
graphics, stats, coin, boot, MASS, mcprofile
broomExtra (>= 0.0.5), crayon (>= 1.3.4), dplyr (>= 0.8.3),
forcats, groupedstats, jmv, magrittr (>= 1.5), purrrlyr, rlang
(>= 0.4.0), stats, stringr, tibble (>= 2.1.3), tidyr (>=
0.8.3), utils, WRS2 (>= 1.0-0)
broomExtra, dplyr, forcats, ipmisc (>= 2.0.0), jmv, purrr,
rlang, stats, tidyBF (>= 0.2.0), tidyr, utils, WRS2
broomExtra, dplyr, forcats, ipmisc, jmv, purrr, rlang, stats,
tidyBF, tidyr, utils, WRS2
broomExtra, dplyr, dunn.test, forcats, ipmisc, Matrix,
PMCMRplus, purrr, rlang, stats, tidyBF, tidyr, utils, WRS2
broomExtra, dplyr, dunn.test, forcats, ipmisc (>= 3.0.1),
PMCMRplus, purrr, rlang, stats, tidyBF (>= 0.2.1), tidyr,
utils, WRS2 (>= 1.1-0)
broomExtra, dplyr, dunn.test, forcats, ipmisc, PMCMRplus,
purrr, rlang, stats, tidyBF (>= 0.2.1), tidyr, utils, WRS2
BayesFactor, dplyr, ipmisc (>= 4.0.0), PMCMRplus, parameters,
purrr, rlang, stats, WRS2
BayesFactor, dplyr, insight (>= 0.10.0), ipmisc (>= 4.1.0),
PMCMRplus, parameters, purrr, rlang, stats, WRS2
BayesFactor, dplyr, ipmisc, parameters (>= 0.10.0), PMCMRplus
(>= 1.7.1), purrr, rlang, stats, WRS2
BayesFactor, dplyr, insight (>= 0.12.0), ipmisc (>= 5.0.2),
parameters (>= 0.11.0), PMCMRplus, purrr, rlang, stats, WRS2
BayesFactor, dplyr, ipmisc (>= 5.0.2), parameters (>= 0.11.0),
PMCMRplus, purrr, rlang, stats, WRS2
BayesFactor, dplyr, insight (>= 0.13.2), ipmisc, parameters
(>= 0.13.0), PMCMRplus, purrr, rlang, stats, WRS2
BayesFactor, dplyr, insight (>= 0.14.1), ipmisc, parameters
(>= 0.14.0), PMCMRplus, purrr, rlang, stats, WRS2 (>= 1.1-1)
dplyr, insight (>= 0.14.5), parameters (>= 0.15.0), PMCMRplus,
purrr, rlang, stats, statsExpressions (>= 1.2.0), WRS2 (>=
1.1-3)
TeachingDemos, rioja, mgcv, MASS, tibble, dplyr, magrittr,
ggplot2, forcats, assertr, vegan, rlang, ggrepel, tidyr, purrr
stats, utils, graphics, methods, deeptime (>= 0.2.1), ape, sf,
stringdist, geosphere, h3jsr (>= 1.3.0), httr, pbapply
mnormt, doParallel, parallel, foreach, iterators
mnormt, foreach, iterators, parallel, doParallel
maps, raster, rjson, gtools, RCurl, plyr, scales,
locfit, gtools, caTools, pscl, Imap, RCurl, devtools
locfit, gtools, caTools, pscl, Imap, RCurl, devtools, raster,
sp, rgdal, ggplot2, lattice, RColorBrewer, agricolae
locfit, gtools, caTools, pscl, Imap, RCurl, devtools, raster,
sp, rgdal, ggplot2, lattice, RColorBrewer, agricolae, plyr
locfit, gtools, caTools, Imap, raster, rgdal, ggplot2,
lattice, RColorBrewer, plyr, sp, pscl, agricolae
locfit, raster, ggplot2, plyr, rgdal, lattice
phangorn (>= 1.99.12), stats, phytools, graphics, grDevices,
methods, utils
phangorn (>= 2.0.0), stats, phytools (>= 0.6-00), graphics,
grDevices, methods, utils
phangorn (>= 2.0.0), stats, phytools (>= 0.6-00), jsonlite,
graphics, grDevices, methods, png, RCurl, utils
phangorn (>= 2.6.3), stats, phytools (>= 0.6-00), jsonlite,
graphics, grDevices, methods, png, RCurl, utils
ggthemes, jcolors, oompaBase, palr, pals, scico, viridisLite,
rlang
gameofthrones (>= 1.0.0), ggthemes, jcolors, oompaBase,
harrypotter (>= 2.1.0), palr, pals, scico, viridisLite, rlang
gameofthrones (>= 1.0.0), ggthemes (>= 4.0.0), jcolors,
oompaBase, harrypotter (>= 2.1.0), palr, pals, scico,
viridisLite, rlang
gameofthrones (>= 1.0.0), ggthemes (>= 4.0.0), jcolors,
oompaBase, harrypotter (>= 2.1.0), palr, pals, scico,
viridisLite, rlang, glue, rematch2, rstudioapi, prismatic
gameofthrones (>= 1.0.0), ggthemes (>= 4.0.0), jcolors,
oompaBase, harrypotter (>= 2.1.0), palr, pals, scico,
viridisLite, rlang, rematch2, rstudioapi, prismatic
gsl, methods, minqa, mvtnorm, R6, spatstat
dbplyr, downloadthis, DBI, DT, ggplotify, ggwordcloud,
ggExtra, grDevices, gridExtra (>= 2.3), htmltools, htmlwidgets,
leaflet, methods, plotly, rmarkdown, RPostgreSQL, scales,
stats, utils, viridisLite
dichromat, colorspace, graphics, grDevices, mapproj, methods,
rgl, stats
dichromat, colorspace, graphics, grDevices, mapproj, maps,
methods, stats
lmerTest, gmodels, lattice, mvtnorm, lme4
mgcv, survival (>= 2.39-5), checkmate, magrittr, rlang, tidyr
(>= 0.7.0), ggplot2, dplyr (>= 0.7.0), purrr (>= 0.2.3),
tibble, msm, lazyeval, Formula, mvtnorm
mgcv, survival (>= 2.39-5), checkmate, magrittr, rlang, tidyr
(>= 0.8.3), ggplot2, dplyr (>= 0.7.0), purrr (>= 0.2.3),
tibble, msm, lazyeval, Formula, mvtnorm
mgcv, survival (>= 2.39-5), checkmate, magrittr, rlang, tidyr
(>= 1.0.0), ggplot2, dplyr (>= 0.7.0), purrr (>= 0.2.3),
tibble, lazyeval, Formula, mvtnorm, pec
mgcv, survival (>= 2.39-5), checkmate, magrittr, rlang, tidyr
(>= 1.0.0), ggplot2 (>= 3.2.0), dplyr (>= 0.7.0), purrr (>=
0.2.3), tibble, lazyeval, Formula, mvtnorm, pec
mgcv, survival (>= 2.39-5), checkmate, magrittr, rlang, tidyr
(>= 1.0.0), ggplot2 (>= 3.2.0), dplyr (>= 0.7.0), purrr (>=
0.2.3), tibble, lazyeval, Formula, mvtnorm, pec, vctrs
mgcv, survival (>= 2.39-5), checkmate, magrittr, rlang, tidyr
(>= 1.0.0), ggplot2 (>= 3.2.0), dplyr (>= 1.0.0), purrr (>=
0.2.3), tibble, lazyeval, Formula, mvtnorm, pec, vctrs (>=
0.3.0)
mgcv, survival (>= 2.39-5), checkmate, magrittr, rlang, tidyr
(>= 1.0.0), ggplot2 (>= 3.2.2), dplyr (>= 1.0.0), purrr (>=
0.2.3), tibble, lazyeval, Formula, mvtnorm, pec, vctrs (>=
0.3.0)
grDevices, graphics, methods, utils, stats, digest, tools,
Rcpp
ggplot2 (>= 2.1.0), gridExtra, grid, dplyr
crayon, dplyr, Formula, ggplot2, jtools (>= 2.0.1), lmerTest,
magrittr, methods, purrr, rlang (>= 0.3.0), stringr, tibble
crayon, dplyr, Formula, ggplot2, jtools (>= 2.0.1), lmerTest,
magrittr, methods, purrr, rlang (>= 0.3.0), stringr, tibble (>=
2.0.0)
knitr, MASS, Matrix (>= 1.2-11), progress, matrixcalc, texreg,
ggplot2, reshape2, methods
knitr, MASS, Matrix (>= 1.2-11), progress, matrixcalc, texreg,
ggplot2, reshape2
methods, stats, utils, httr (>= 1.0.0), XML, oai
attempt, dplyr, glue, httr, jsonlite, magrittr, purrr, RCurl,
readr, rlang, stringr
fslr, oro.nifti, servr, htmltools, utils
neurobase, oro.nifti, servr, htmltools, utils
dplyr, tidyverse, binom, PropCIs, ratesci, Hmisc, shiny,
shinythemes, readxl, DT, stats
backports, checkmate, data.table, mlr3misc, R6
backports, checkmate, data.table, methods, mlr3misc (>=
0.9.4), R6
backports, checkmate, data.table, mlr3misc (>= 0.4.0), R6
backports, checkmate, data.table, mlr3misc (>= 0.5.0), R6
backports, checkmate, data.table, methods, mlr3misc (>=
0.5.0), R6
backports, checkmate, data.table, methods, mlr3misc (>=
0.7.0), R6
BBmisc (>= 1.8), checkmate (>= 1.5.1), parallel
BBmisc (>= 1.8), checkmate (>= 1.8.0), parallel, stats, utils
checkmate, data.table, set6 (>= 0.2.0), R6
checkmate, data.table, dictionar6 (>= 0.1.2), set6 (>= 0.2.3),
R6
insight (>= 0.4.1), bayestestR (>= 0.2.5), tools
bayestestR (>= 0.7.5), insight (>= 0.11.0), methods, stats,
utils
bayestestR (>= 0.8.2), insight, methods, stats, utils
bayestestR (>= 0.8.2), insight (>= 0.13.2), methods, stats,
utils
bayestestR (>= 0.9.0), insight (>= 0.13.2), methods, stats,
utils
bayestestR (>= 0.11.0), datawizard (>= 0.2.1), insight (>=
0.14.4), graphics, methods, stats, utils
bayestestR (>= 0.11.5), datawizard (>= 0.2.1), insight (>=
0.14.5), graphics, methods, stats, utils
bayestestR (>= 0.11.5), datawizard (>= 0.2.3), insight (>=
0.16.0), graphics, methods, stats, utils
bayestestR (>= 0.11.5), datawizard (>= 0.4.1), insight (>=
0.17.1), graphics, methods, stats, utils
bayestestR (>= 0.12.1), datawizard (>= 0.5.0), insight (>=
0.18.0), graphics, methods, stats, utils
bayestestR (>= 0.12.1), datawizard (>= 0.6.0), insight (>=
0.18.3), graphics, methods, stats, utils
insight (>= 0.5.0), bayestestR (>= 0.3.0), methods, stats,
tools, utils
bayestestR (>= 0.13.0), datawizard (>= 0.6.3), insight (>=
0.18.6), graphics, methods, stats, utils
insight (>= 0.7.0), bayestestR (>= 0.4.0), methods, stats,
tools, utils
bayestestR (>= 0.4.0), insight (>= 0.8.0), methods, stats,
tools, utils
bayestestR (>= 0.5.0), insight (>= 0.8.1), methods, stats,
tools, utils
bayestestR (>= 0.7.0), insight (>= 0.8.1), methods, stats,
tools, utils
bayestestR (>= 0.7.5), insight (>= 0.10.0), methods, stats,
tools, utils
assertthat, kinship2, graphics, maxLik, stats, utils
assertthat, graphics, kinship2, maxLik, stats, utils
utils, RcppTOML, glue, readr (>= 1.4.0), purrr
easyalluvial (>= 0.2.1.0) , tidyr (>= 1.0.0) , dplyr , purrr ,
forcats , magrittr , tibble , htmlwidgets , stringr
easyalluvial (>= 0.2.1.0), tidyr (>= 1.0.0), dplyr, purrr,
forcats, magrittr, tibble, htmlwidgets, stringr
crosstalk, htmlwidgets (>= 0.6.0), utils
mnis, hansard, dplyr, utils, tibble, httr, jsonlite, stringi
mnis, hansard, dplyr, utils, tibble, httr, jsonlite, stringi,
sf
hansard, mnis, dplyr, tibble, httr, jsonlite, stringi, sf
hansard, mnis, dplyr, stringi, sf, snakecase, readr
slam, Rglpk, quadprog, FRAPO, corpcor, parallel
slam, Rglpk, quadprog, FRAPO, corpcor, parallel, stats,
utils,truncnorm
slam, Rglpk, quadprog, corpcor, parallel, truncnorm
fitdistrplus, flexsurv, ggplot2, stats, graphics
dplyr (>= 0.5.0), dbplyr, DBI, lazyeval, RSQLite (>= 1.0.0),
stats, stringr (>= 1.1.0), tidyr (>= 0.6.0)
purrr, Rcpp, cli (>= 2.5.0), checkmate, readr, tidyr, dplyr,
tibble, yaml, withr, rmarkdown, pillar, rlang, magrittr,
tidyselect, lifecycle
dplyr, rlang (>= 0.3.0.1), purrr, utils, tibble, generics,
glue, magrittr, stats, tidyr, globals
dplyr (>= 0.8.0.1), rlang (>= 0.3.1), purrr, utils, tibble (>=
2.1.1), generics, glue, magrittr, stats, tidyr, globals
dplyr (>= 0.8.0.1), rlang (>= 0.3.1), purrr, utils, tibble (>=
2.1.1), generics, glue, magrittr, stats, tidyr, globals, vctrs
(>= 0.2.0)
dplyr (>= 0.8.0.1), rlang (>= 0.3.1), purrr, utils, tibble (>=
2.1.1), generics, glue, magrittr, stats, tidyr, globals,
prettyunits, vctrs (>= 0.2.0)
dplyr (>= 0.8.0.1), rlang (>= 0.3.1), purrr, utils, tibble (>=
2.1.1), generics, glue, magrittr, stats, tidyr (>= 1.0.0),
globals, prettyunits, vctrs (>= 0.2.0)
dplyr (>= 0.8.0.1), rlang (>= 0.3.1), purrr, utils, tibble (>=
2.1.1), generics (>= 0.1.0), glue, magrittr, stats, tidyr (>=
1.0.0), globals, prettyunits, vctrs (>= 0.2.0)
dplyr (>= 0.8.0.1), rlang (>= 0.3.1), purrr, utils, tibble (>=
2.1.1), generics (>= 0.1.0), glue, lifecycle, magrittr, stats,
tidyr (>= 1.0.0), globals, prettyunits, vctrs (>= 0.2.0)
dplyr (>= 0.8.0.1), generics (>= 0.1.0), globals, glue,
hardhat (>= 0.1.5.9000), lifecycle, magrittr, prettyunits,
purrr, rlang (>= 0.3.1), stats, tibble (>= 2.1.1), tidyr (>=
1.0.0), utils, vctrs (>= 0.2.0)
cli, dplyr (>= 0.8.0.1), generics (>= 0.1.0.9000), ggplot2,
globals, glue, hardhat (>= 0.1.6.9001), lifecycle, magrittr,
prettyunits, purrr, rlang (>= 0.3.1), stats, tibble (>= 2.1.1),
tidyr (>= 1.0.0), utils, vctrs (>= 0.2.0), withr
cli, dplyr (>= 0.8.0.1), generics (>= 0.1.2), ggplot2,
globals, glue, hardhat (>= 1.1.0), lifecycle, magrittr, pillar,
prettyunits, purrr, rlang (>= 0.3.1), stats, tibble (>= 2.1.1),
tidyr (>= 1.0.0), utils, vctrs (>= 0.4.1), withr
Rcpp (>= 0.11.2), zoo, parallel, ggplot2, MASS, tseries,
data.table, FKF, urca, plot3D, methods
Rcpp (>= 0.11.2), zoo, parallel, ggplot2, MASS, tseries,
data.table, KFAS, urca, plot3D, methods
Rcpp (>= 0.11.2), zoo, parallel, ggplot2, grid, MASS, tseries,
data.table, FKF, urca, plot3D
zoo, parallel, ggplot2, grid, MASS, TTR, data.table, glmnet,
methods, Rcpp, FKF
zoo, parallel, ggplot2, grid, MASS, TTR, data.table, glmnet,
methods, Rcpp, KFAS
tidygraph, rlang, igraph, stats, magrittr, Rcpp, mgcv, digest,
dplyr
tidygraph, rlang, igraph, stats, mgcv, digest, dplyr
Rcpp, rlang, purrr, tibble, dplyr (>= 0.8.0), tidyr, ggplot2
(>= 3.0.0), stringr, magrittr, crayon, pillar, infotheo, MASS,
forcats
Rcpp, rlang, purrr, tibble, dplyr (>= 0.8.0), tidyr (>=
1.0.0), ggplot2 (>= 3.0.0), stringr, magrittr, crayon, pillar,
infotheo, MASS, forcats
crayon, dplyr (>= 0.8.0), forcats, ggplot2 (>= 3.3.0),
infotheo, magrittr, MASS, pillar, purrr, Rcpp, rlang, stringr,
tibble, tidyr (>= 1.0.0)
crayon, lubridate, methods, pillar, utils, vctrs (>= 0.2.0)
survival, coin (>= 1.0-24), zoo, sandwich (>= 1.1-1)
grDevices, stats, utils, survival, Formula (>= 1.2-1)
grDevices, stats, utils, survival, Formula (>= 1.2-1), inum
(>= 1.0-0)
grDevices, stats, utils, survival, Formula (>= 1.2-1), inum
(>= 1.0-0), rpart (>= 4.1-11)
grDevices, stats, utils, survival, Formula (>= 1.2-1), inum
(>= 1.0-0), rpart (>= 4.1-11), party (>= 1.3-0)
reshape2, ggplot2, grid, gridExtra, plyr, RColorBrewer
ggplot2 (>= 3.0.0), gtable, grid, stats, grDevices, utils,
graphics
AnnotationDbi, DBI, doParallel, foreach, rmarkdown,
org.Hs.eg.db
AnnotationDbi, DBI, doParallel, foreach, rmarkdown,
org.Hs.eg.db, ggplot2, fpc
AnnotationDbi, DBI, doParallel, foreach, rmarkdown,
org.Hs.eg.db, ggplot2, fpc, pathview
AnnotationDbi, DBI, doParallel, foreach, rmarkdown,
org.Hs.eg.db, ggplot2, fpc, grDevices, igraph
DBI, AnnotationDbi, doParallel, foreach, rmarkdown,
org.Hs.eg.db, ggplot2, ggraph, fpc, grDevices, igraph, R.utils,
magick, KEGGREST, KEGGgraph, knitr
DBI, AnnotationDbi, doParallel, foreach, rmarkdown,
org.Hs.eg.db, ggplot2, ggraph, ggupset, fpc, grDevices, igraph,
R.utils, magick, msigdbr, KEGGREST, KEGGgraph, knitr
R6, magrittr, glue (>= 1.3.0), logging, rlang, purrr
httr, jsonlite, timeSeries, parallel, testthat, usethis, utils
assertive.base (>= 0.0-3), assertive.properties,
assertive.types, assertive.files, assertive.reflection,
assertive.strings, plyr, stringr (>= 1.0.0), utils
assertive.base (>= 0.0-3), assertive.files, assertive.numbers,
assertive.properties, assertive.reflection, assertive.strings,
assertive.types, magrittr, plyr, stringi, utils
BART, boot, gbm, ggplot2, metR, parallel, pryr, stats, twang,
tidyr
BART, boot, gbm, ggplot2, metR, pryr, stats, twang, tidyr
R.matlab, data.table (>= 1.12.2), magrittr (>= 1.5), dplyr (>=
1.0.0), stringr (>= 1.4.0), tibble (>= 3.0.1), tidyr (>=
1.1.0), fANCOVA, purrr (>= 0.3.3), ggplot2 (>= 3.3.0),
tidyselect (>= 1.1.0), cowplot, anomalize, lubridate
R.matlab, data.table (>= 1.12.2), magrittr (>= 1.5), dplyr (>=
1.0.0), stringr (>= 1.4.0), tibble (>= 3.0.1), tidyr (>=
1.1.0), fANCOVA, purrr (>= 0.3.3), ggplot2 (>= 3.4.0),
tidyselect (>= 1.1.0), cowplot, anomalize, lubridate
maftools, clusterProfiler, BiocGenerics, GenomicFeatures,
purrr, utils, glmnet, randomForest, stats, survival, survminer,
caret, data.table, RColorBrewer, grDevices, pROC, graphics
BiocGenerics, GenomicFeatures, purrr, utils, glmnet,
randomForest, stats, survival, survminer, caret, data.table,
RColorBrewer, grDevices, pROC, graphics, maftools,
clusterProfiler
BiocGenerics, purrr, utils, glmnet, randomForest, stats,
survival, survminer, caret, data.table, RColorBrewer,
grDevices, pROC, graphics, maftools, clusterProfiler
clinUtils, ggplot2 (>= 3.0.0), plyr, cowplot, tools, reshape2,
knitr, grid, dplyr, stringr, parallel, gridExtra, scales
clinUtils, ggplot2 (>= 3.0.0), plyr, cowplot, tools, reshape2,
knitr, grid, stringr, parallel, gridExtra, scales
clinUtils, ggplot2 (>= 3.0.0), plyr, cowplot, tools, reshape2,
knitr, grid, stringr, parallel, gridExtra, scales, utils
raster, sp, rgdal, RNiftyReg, abind, Morpho
raster, sp, rgdal, abind, Morpho, dplyr, imager, magrittr,
purrr, vegan, RNiftyReg
raster, sp, rgdal, abind, Morpho, dplyr, imager, magrittr,
purrr, vegan, RNiftyReg, geomorph, ClusterR
Rcpp (>= 0.11.0), ggplot2 (>= 2.1.0), jpeg (>= 0.1-8), png (>=
0.1-7), grDevices, utils, RcppParallel, dplyr, gtable
Rcpp (>= 0.11.0), R6 (>= 2.1.2), ggplot2 (>= 2.1.0), jpeg (>=
0.1-8), png (>= 0.1-7), grDevices, utils, RcppParallel, dplyr,
gtable, gridExtra
rcdd, mapproj, geometry, pbmcapply, utils, plot3D
rcdd, mapproj, geometry, pbmcapply, utils, plot3D, imager,
stats, sp
geometry, pbmcapply, plot3D, readbitmap, rcdd, sp, viridisLite
geometry, pbmcapply, plot3D, rcdd, sp, magick, cluster,
viridisLite
cluster, geometry(>= 0.4.0), magick, pbmcapply, plot3D, sp,
viridisLite
cluster, future.apply, geometry(>= 0.4.0), lightr(>= 1.0),
magick, plot3D, progressr, sp, viridisLite
alphashape3d, cluster, future.apply, geometry(>= 0.4.0),
lightr(>= 1.0), magick, plot3D, progressr, sp, viridisLite
cluster, future.apply, geometry(>= 0.4.0), lightr(>= 1.0),
magick, farver, plot3D, progressr, sp, viridisLite
paws.compute, paws.storage, paws.database,
paws.security.identity, paws.application.integration
paws.compute, paws.storage, paws.database, paws.networking,
paws.management, paws.machine.learning, paws.analytics,
paws.security.identity, paws.application.integration,
paws.cost.management, paws.customer.engagement
paws.compute (>= 0.1.10), paws.storage (>= 0.1.10),
paws.database (>= 0.1.10), paws.networking (>= 0.1.10),
paws.management (>= 0.1.10), paws.machine.learning (>= 0.1.10),
paws.analytics (>= 0.1.10), paws.security.identity (>= 0.1.10),
paws.application.integration (>= 0.1.10), paws.cost.management
(>= 0.1.10), paws.customer.engagement (>= 0.1.10)
paws.compute (>= 0.1.11), paws.storage (>= 0.1.11),
paws.database (>= 0.1.11), paws.networking (>= 0.1.11),
paws.management (>= 0.1.11), paws.machine.learning (>= 0.1.11),
paws.analytics (>= 0.1.11), paws.security.identity (>= 0.1.11),
paws.application.integration (>= 0.1.11), paws.cost.management
(>= 0.1.11), paws.customer.engagement (>= 0.1.11)
paws.analytics (>= 0.1.12), paws.application.integration (>=
0.1.12), paws.compute (>= 0.1.12), paws.cost.management (>=
0.1.12), paws.customer.engagement (>= 0.1.12), paws.database
(>= 0.1.12), paws.developer.tools (>= 0.1.12),
paws.end.user.computing (>= 0.1.12), paws.machine.learning (>=
0.1.12), paws.management (>= 0.1.12), paws.networking (>=
0.1.12), paws.security.identity (>= 0.1.12), paws.storage (>=
0.1.12)
paws.compute (>= 0.1.3), paws.storage (>= 0.1.3),
paws.database (>= 0.1.3), paws.networking (>= 0.1.3),
paws.management (>= 0.1.3), paws.machine.learning (>= 0.1.3),
paws.analytics (>= 0.1.3), paws.security.identity (>= 0.1.3),
paws.application.integration (>= 0.1.3), paws.cost.management
(>= 0.1.3), paws.customer.engagement (>= 0.1.3)
paws.compute (>= 0.1.4), paws.storage (>= 0.1.4),
paws.database (>= 0.1.4), paws.networking (>= 0.1.4),
paws.management (>= 0.1.4), paws.machine.learning (>= 0.1.4),
paws.analytics (>= 0.1.4), paws.security.identity (>= 0.1.4),
paws.application.integration (>= 0.1.4), paws.cost.management
(>= 0.1.4), paws.customer.engagement (>= 0.1.4)
paws.compute (>= 0.1.5), paws.storage (>= 0.1.5),
paws.database (>= 0.1.5), paws.networking (>= 0.1.5),
paws.management (>= 0.1.5), paws.machine.learning (>= 0.1.5),
paws.analytics (>= 0.1.5), paws.security.identity (>= 0.1.5),
paws.application.integration (>= 0.1.5), paws.cost.management
(>= 0.1.5), paws.customer.engagement (>= 0.1.5)
paws.compute (>= 0.1.6), paws.storage (>= 0.1.6),
paws.database (>= 0.1.6), paws.networking (>= 0.1.6),
paws.management (>= 0.1.6), paws.machine.learning (>= 0.1.6),
paws.analytics (>= 0.1.6), paws.security.identity (>= 0.1.6),
paws.application.integration (>= 0.1.6), paws.cost.management
(>= 0.1.6), paws.customer.engagement (>= 0.1.6)
paws.compute (>= 0.1.7), paws.storage (>= 0.1.7),
paws.database (>= 0.1.7), paws.networking (>= 0.1.7),
paws.management (>= 0.1.7), paws.machine.learning (>= 0.1.7),
paws.analytics (>= 0.1.7), paws.security.identity (>= 0.1.7),
paws.application.integration (>= 0.1.7), paws.cost.management
(>= 0.1.7), paws.customer.engagement (>= 0.1.7)
paws.compute (>= 0.1.8), paws.storage (>= 0.1.8),
paws.database (>= 0.1.8), paws.networking (>= 0.1.8),
paws.management (>= 0.1.8), paws.machine.learning (>= 0.1.8),
paws.analytics (>= 0.1.8), paws.security.identity (>= 0.1.8),
paws.application.integration (>= 0.1.8), paws.cost.management
(>= 0.1.8), paws.customer.engagement (>= 0.1.8)
paws.compute (>= 0.1.9), paws.storage (>= 0.1.9),
paws.database (>= 0.1.9), paws.networking (>= 0.1.9),
paws.management (>= 0.1.9), paws.machine.learning (>= 0.1.9),
paws.analytics (>= 0.1.9), paws.security.identity (>= 0.1.9),
paws.application.integration (>= 0.1.9), paws.cost.management
(>= 0.1.9), paws.customer.engagement (>= 0.1.9)
base64enc, digest, httr, ini, jsonlite, methods, utils, xml2
base64enc, digest, httr, jsonlite, methods, utils, xml2
base64enc, curl, digest, httr, jsonlite, methods, utils, xml2
base64enc, curl, digest, httr, jsonlite, methods, utils, Rcpp,
xml2
MASS, Rmisc, plyr, DescTools, lmtest,dplyr
rgenoud, ggplot2, stats, qcc, grDevices, ggpubr
formatR, xml2, jsonlite, zip, utils, textclean, stringr
Matrix (>= 1.1.1), parallel, MASS, methods
Matrix (>= 1.2.3), parallel, MASS, methods
Matrix (>= 1.2.3), parallel, magrittr, MASS, methods
broom, dplyr, magrittr, MASS, Matrix (>= 1.2.3), methods,
numDeriv, parallel, knitr
rstan (>= 2.18), reshape2, mvtnorm, igraph
rstan (>= 2.18), reshape2, mvtnorm, igraph, loo
rstan (>= 2.18), reshape2, mvtnorm, igraph, loo, lifecycle
rstan (>= 2.18), rstantools (>= 2.1.1), reshape2, mvtnorm,
igraph, loo, lifecycle
Rcpp, combinat, stats, graphics, grDevices, utils, methods
data.table, ggplot2, magrittr, mmapcharr, plotly, Rcpp (>=
0.12.8), robust, RSpectra, vcfR
data.table, ggplot2, magrittr, mmapcharr (>= 0.3), plotly,
Rcpp (>= 0.12.8), robust, RSpectra, vcfR
bigutilsr (>= 0.3), data.table, ggplot2, magrittr, mmapcharr
(>= 0.3), Rcpp (>= 0.12.8), RSpectra
graph, RBGL, ggm, robustbase, graphics, vcd
graph, RBGL, ggm, corpcor, robustbase, graphics, vcd
graphics, utils, methods, abind, graph, RBGL, igraph, ggm,
corpcor, robustbase, vcd, Rcpp
graphics, utils, methods, abind, graph, RBGL, igraph, ggm,
corpcor, robustbase, vcd, Rcpp, bdsmatrix, sfsmisc
graphics, utils, methods, abind, graph, RBGL, igraph, ggm,
corpcor, robustbase, vcd, Rcpp, bdsmatrix, sfsmisc, fastICA,
clue, gmp
stats, graphics, utils, methods, abind, graph, RBGL, igraph,
ggm, corpcor, robustbase, vcd, Rcpp, bdsmatrix, sfsmisc,
fastICA, clue, gmp
stats, graphics, utils, methods, abind, graph, RBGL, igraph,
ggm, corpcor, robustbase, vcd, Rcpp, bdsmatrix, sfsmisc (>=
1.0-26), fastICA, clue, gmp
stats, graphics, utils, methods, abind, graph, RBGL, igraph,
ggm, corpcor, robustbase, vcd, Rcpp, bdsmatrix, sfsmisc (>=
1.0-26), fastICA, clue, gmp, dagitty
stats, graphics, utils, methods, abind, graph, RBGL, igraph,
ggm, corpcor, robustbase, vcd, Rcpp, bdsmatrix, sfsmisc (>=
1.0-26), fastICA, clue, dagitty
stats, graphics, utils, methods, abind, graph, RBGL, igraph,
ggm, corpcor, robustbase, vcd, Rcpp, bdsmatrix, sfsmisc (>=
1.0-26), fastICA, clue
combinat, graphics, interp, plot3D, plotrix, Rdpack (>= 0.7),
stats, utils
combinat, graphics, interp, plot3D, plotrix, Rdpack (>= 0.7),
stats
pcalg, graph, Matrix, stats, MASS, utils, Hmisc, methods,
lme4, sommer, ggm
bigmemory, bigstatsr, bnlearn, Rfast, Rfast2, robustbase,
stats
bigstatsr, bnlearn, Rfast, Rfast2, robustbase, stats
bigstatsr, bnlearn, dcov, Rfast, Rfast2, robustbase, stats
ape (>= 3.0.6), distory, geiger, graphics, methods, mvSLOUCH,
phangorn, stats, TreeSim, treespace, utils, yuima
ape (>= 3.0.6), distory, geiger, graphics, methods, mvSLOUCH,
phangorn, stats, TreeSim, utils, yuima
ape (>= 3.0.6), graphics, methods, mvSLOUCH, phangorn, stats,
TreeSim, utils, yuima
ape (>= 3.0.6), graphics, methods, mvSLOUCH, phangorn, stats,
utils, yuima
Rcpp (>= 1.0.5), survival, doParallel, parallel, foreach,
ggplot2, prodlim, riskRegression, PermAlgo, pec
Rcpp (>= 1.0.5), survival, doParallel, parallel, foreach,
ggplot2, prodlim, riskRegression, PermAlgo
devtools, magrittr, dplyr, tidyr, purrr, readr, ggplot2, broom
devtools, magrittr, dplyr, tidyr, purrr, readr, ggplot2
ggplot2, data.table, gWidgets, RGtk2, strvalidator
ggplot2, data.table, gWidgets, mc2d, plyr
boot, stplanr (>= 0.2.8), readr, sf, magrittr
methods, Matrix, BB, PolynomF (>= 2.0-2), gbutils, zoo, ltsa,
stats4, lagged (>= 0.2.2), mcompanion, Rdpack (>= 0.9),
lubridate
methods, sarima, Matrix, BB, PolynomF (>= 2.0-2), gbutils,
zoo, xts, stats4, lagged (>= 0.2.2), mcompanion, Rdpack (>=
0.9), lubridate
methods, sarima, Matrix (>= 1.5-0), BB, PolynomF (>= 2.0-2),
gbutils, zoo, xts, stats4, lagged (>= 0.2.2), mcompanion,
Rdpack (>= 0.9), lubridate
boot, car, coefplot, lmtest, sandwich, papeR
astsa, multitaper, Rcpp, ddalpha, shapes
grid, multitaper, Rcpp, ddalpha, R.utils
Rcpp (>= 0.12.19), stats, httr, rvest, jsonlite, data.table,
survival
zoo, xts, RCurl, XML, lubridate, jsonlite, reshape2
httr, zoo, xts, XML, lubridate, jsonlite, reshape2
httr, zoo, xts, XML, lubridate, jsonlite, reshape2, xml2,
stringr, readr
httr, zoo, xts, XML, lubridate, jsonlite, reshape2, readr,
curl, xml2
httr, zoo, xts, XML, lubridate, jsonlite, reshape2, curl,
xml2, stringr
dplyr, magrittr, purrr, randomForest, readxl, stringr, tibble,
tidyr, tidyselect
grDevices, lattice, magrittr, mgcv, plyr, stats, viridis
grDevices, lattice, magrittr, mgcv, plyr, randomForest, stats,
viridis
grDevices, gridExtra, lattice, magrittr, mgcv, plyr, stats,
viridis
boot, dplyr, ggplot2 (>= 0.9.0), grDevices, gridExtra,
lattice, magrittr, methods, mgcv, plyr, Rcpp (>= 0.11.5),
stats, viridis, utils
ggplot2 (>= 0.9.0), grDevices, gridExtra, lattice, magrittr,
methods, mgcv, plyr, stats, viridis, utils
foreach, ggplot2 (>= 3.0.0), grDevices, lattice, methods,
rlang (>= 0.3.0), stats, utils
crayon, dplyr, glue, httr, jsonlite, magrittr, purrr, rlang,
rlist, stringr, tibble
lubridate, magrittr, dplyr, tibble, geosphere, countrycode,
tidyr, stringr, rlang
lubridate, magrittr, dplyr, geosphere, tidyr, stringr, rlang
lubridate, magrittr, dplyr, geosphere, tidyr, stringr, rlang,
stevemisc
bib2df, lubridate, magrittr, dplyr, geosphere, tidyr, stringr,
rlang, stevemisc (>= 1.1.0)
bib2df, magrittr, dplyr, geosphere, tidyr, stringr, rlang,
stevemisc (>= 1.1.0)
bib2df, magrittr, dplyr, geosphere, tidyr, stringr, rlang,
stevemisc (>= 1.3.0), lifecycle
magrittr, dplyr, geosphere, tidyr, stringr, rlang, stevemisc
(>= 1.3.0), lifecycle
prodlim (>= 1.1.3), survival, rms, foreach
spsurvey, xtable, XML, stringr, sp, car, pbapply, MASS, plyr,
lattice, latticeExtra, grid, VecStatGraphs2D, mvtsplot
car, grid, gstat, lattice, latticeExtra, MASS, moments, plyr,
pbapply, rgeos, sp, spsurvey, stringr, VecStatGraphs2D, xtable,
XML
car, fields, grid, gstat, lattice, latticeExtra, MASS,
moments, plyr, pbapply, Rcpp (>= 0.11.0), sp, spsurvey, xtable
car, grid, gstat, Hmisc, lattice, latticeExtra, MASS, moments,
plyr, pbapply, Rcpp (>= 0.11.0), sp, spsurvey, xtable
data.table, TTR, zoo, curl, xml2, httr, rvest, jsonlite,
stringi, readxl, readr, ggplot2, scales, gridExtra
data.table, TTR, zoo, curl, xml2, httr, rvest, webdriver,
jsonlite, stringi, readxl, readr, ggplot2, scales, gridExtra
data.table, TTR, zoo, curl, xml2, httr, rvest, jsonlite,
stringi, readxl, readr, ggplot2, scales, gridExtra, plotly
data.table, TTR, zoo, PerformanceAnalytics, curl, xml2, httr,
rvest, webdriver, jsonlite, stringi, readxl, readr, ggplot2,
scales, gridExtra, plotly
data.table, TTR, zoo, PerformanceAnalytics, curl, xml2, httr,
rvest, webdriver, lubridate, stringi, jsonlite, readxl, readr,
echarts4r
data.table, TTR, zoo, PerformanceAnalytics, curl, xml2, httr,
rvest, webdriver, lubridate, stringi, jsonlite, readxl, readr,
echarts4r, xefun
data.table, TTR, zoo, PerformanceAnalytics, curl, httr, rvest,
lubridate, stringi, jsonlite, readxl, readr, echarts4r, xefun
dvir, ibdsim2, paramlink2, pedbuildr, segregatr
pedmut, dvir, ibdsim2, paramlink2, pedbuildr, segregatr
methods, Rcpp (>= 0.12.0), RcppParallel (>= 5.0.1), rstantools
(>= 2.1.1), sn
methods, rstan (>= 2.18.1), Rcpp (>= 0.12.0), RcppParallel (>=
5.0.1), rstantools (>= 2.1.1), sn, shiny, ggplot2
methods, utils, grid, RColorBrewer, latticeExtra, ggplot2,
plyr
methods, utils, grid, RColorBrewer, latticeExtra, baseline,
ggplot2, rlang, dplyr, Rcpp (>= 0.12.19)
quadprog, latticeExtra, doParallel, copula, foreach
penalized, survival, clogitL1, stats, tidyverse
data.table (>= 1.9.8), geometry, ggplot2
foreach, doParallel, glmnet, nlme, survival, MASS, survcomp,
survivalROC, ptmixed, stats, dplyr
foreach, doParallel, glmnet, nlme, survival, MASS, stats,
survcomp, survivalROC, dplyr, ptmixed
foreach, doParallel, glmnet, nlme, survival, MASS, stats,
survcomp, survivalROC, dplyr
foreach, doParallel, glmnet, nlme, survival, MASS, stats,
survcomp, survivalROC, dplyr, Matrix, magic, lcmm
doParallel, glmnet, foreach, nlme, survival, MASS, stats,
survcomp, survivalROC, dplyr, Matrix, magic, lcmm
doParallel, glmnet, foreach, nlme, lcmm, survival, survcomp,
survivalROC, stats, MASS, dplyr, purrr, Matrix, magic
quadprog, doParallel, foreach, TSP, igraph
MASS, methods, mgcv, GJRM, stats, trust, utils
Rcpp, glmnet, lfe, ncvreg, tidyr, rlang, magrittr
Rcpp, glmnet, fixest, collapse, rlang, magrittr
Rcpp, glmnet, fixest, collapse, rlang, magrittr, matrixStats,
dplyr, devtools
Rcpp, methods, parallel, lifecycle (>= 0.2.0), rlang (>=
0.4.0)
yaml, stringr, pryr, data.table, methods
corpcor, gnm, matlab, Matrix, signal, stats
magrittr, dplyr, purrr, stats, tibble, broom, tidyr, multcomp,
haven, tidyverse, ggplot2, devtools, MASS
magrittr, dplyr, purrr, stats, tibble, broom, tidyr, multcomp
ape, HHG , dendextend, phytools, Rcpp (>= 0.12.16)
bayestestR (>= 0.12.0), insight (>= 0.18.3), datawizard (>=
0.5.1), methods, stats, utils
bayestestR (>= 0.13.0), insight (>= 0.18.7), datawizard (>=
0.6.2), methods, stats, utils
insight (>= 0.8.1), bayestestR (>= 0.5.0), stats, utils
insight (>= 0.10.0), bayestestR (>= 0.7.5), stats, utils
insight (>= 0.11.0), bayestestR (>= 0.7.5), stats, utils
bayestestR (>= 0.8.2), insight (>= 0.13.2), stats, utils
bayestestR (>= 0.9.0), insight (>= 0.14.0), stats, utils
bayestestR (>= 0.9.0), insight (>= 0.14.0), datawizard, stats,
utils
bayestestR (>= 0.9.0), insight (>= 0.14.0), datawizard (>=
0.2.0), methods, stats, utils
bayestestR (>= 0.11.5), insight (>= 0.17.0), datawizard (>=
0.3.0), methods, stats, utils
bayestestR (>= 0.11.5), insight (>= 0.17.0), datawizard (>=
0.4.1), methods, stats, utils
bayestestR (>= 0.11.5), insight (>= 0.18.0), datawizard (>=
0.4.1.10), methods, stats, utils
shiny (>= 1.1), shinydashboard (>= 0.5), shinydashboardPlus
(>= 0.5), shinyBS (>= 0.61), lubridate (>= 1.6), DT (>= 0.2),
openxlsx (>= 3.0), ggplot2 (>= 2.2), methods
shiny (>= 1.1), shinydashboard (>= 0.5), shinydashboardPlus
(>= 0.5), shinyBS (>= 0.61), lubridate (>= 1.6), DT (>= 0.2),
writexl (>= 1.3), ggplot2 (>= 2.2), methods, utils
shiny (>= 1.1), shinydashboard (>= 0.5), shinydashboardPlus
(<= 2.0), shinyBS (>= 0.61), lubridate (>= 1.6), DT (>= 0.2),
writexl (>= 1.3), ggplot2 (>= 2.2), methods, utils
shiny (>= 1.1), shinydashboard (>= 0.5), shinyBS (>= 0.61),
lubridate (>= 1.6), DT (>= 0.2), writexl (>= 1.3), ggplot2 (>=
2.2), methods, utils
shiny (>= 1.5), shinydashboard (>= 0.5), shinyBS (>= 0.61),
lubridate (>= 1.6), DT (>= 0.2), writexl (>= 1.3), ggplot2 (>=
2.2), methods, utils, fresh, yaml, grDevices
graphics, grDevices, ipred (>= 0.9-6), methods, party (>=
1.3-3), randomForest (>= 4.6-14), stats, survival (>=
2.44-1.1), utils
ggplot2, rlang, dabestr, gridExtra, Matrix
survival, methods, kernlab, foreach, xgboost
desc, devtools, fs, glue, magrittr, purrr, rprojroot,
rstudioapi, usethis, utils, withr, xfun
ggplot2, rlang, rmarkdown, shiny, stats, utils, whisker
curl, DBI, dplyr (>= 1.0.0), httr, jsonlite, magrittr, readr,
rlang, RSQLite, tidyr (>= 1.0.0), utils
dplyr, visNetwork, DiagrammeR, xml2, purrr
rvest, xml2, magrittr, tibble, tm, wordcloud, urltools, dplyr,
graph, Rgraphviz, ggplot2, RWeka, cluster, RColorBrewer
rvest, xml2, magrittr, tibble, tm, wordcloud, urltools, dplyr,
graph, Rgraphviz, ggplot2, RWeka, cluster, RColorBrewer,
data.table
rvest, xml2, magrittr, tibble, tm, wordcloud, urltools, dplyr,
graph, Rgraphviz, ggplot2, RWeka, cluster, RColorBrewer,
data.table, SnowballC
RSelenium, foreign, magrittr, purrr, rio, stringr, tools,
utils
TDA, plotly, viridis, pbapply, graphics, stats, abind
digest, tools, utils, tikzDevice, cacheSweave
R6 (>= 2.4.1), DT, DataVisualizations, dbscan, dplyr, e1071,
finalfit, ggplot2, ggthemes, Hmisc, magrittr, MASS, RWeka, VIM,
bbmle, grid, gridExtra, mice, nortest, outliers, plotly, psych,
purrr, rcompanion, readr, readxl, rlang, rmarkdown, robust,
shiny, stats, stringr, tibble, tidyr, tidyselect, tools,
writexl
R6 (>= 2.4.1), DT, DataVisualizations, dbscan, dplyr, e1071,
finalfit, ggplot2, ggthemes, Hmisc, magrittr, MASS, RWeka, VIM,
bbmle, grid, gridExtra, mice, nortest, outliers, plotly, psych,
purrr, rcompanion, readr, readxl, rJava, rlang, rmarkdown,
robust, shiny, shinydashboard, shinyjs, shinyWidgets, stats,
stringr, tibble, tidyr, tidyselect, tools, writexl
dplyr, ggplot2, Rcpp, scales, stats, tibble, tidyr
dplyr, ggplot2, methods, purrr, rlang, stats, stats4,
truncnorm, Rcpp (>= 0.12.0), RcppParallel (>= 5.0.1), Rdpack,
rstan (>= 2.18.1), rstantools (>= 2.2.0)
quadprog, igraph (>= 0.6), Matrix, fastmatch, parallel, rgl
quadprog, igraph (>= 0.6), Matrix, fastmatch, parallel, nnls
quadprog, igraph (>= 0.6), Matrix, parallel, nnls
quadprog, igraph (>= 0.6), Matrix, fastmatch
quadprog, igraph (>= 0.6), Matrix, parallel, nnls, methods,
utils, stats, graphics, grDevices
quadprog, igraph (>= 1.0), Matrix, parallel, nnls, methods,
utils, stats, graphics, grDevices, Biostrings
quadprog, igraph (>= 1.0), Matrix, parallel, nnls, methods,
utils, stats, graphics, grDevices
quadprog, igraph (>= 1.0), Matrix, parallel, nnls, methods,
utils, stats, graphics, grDevices, fastmatch
quadprog, igraph (>= 1.0), Matrix, parallel, methods, utils,
stats, graphics, grDevices, fastmatch, magrittr, Rcpp (>=
0.12.0)
digest, fastmatch, generics, graphics, grDevices, igraph (>=
1.0), Matrix, methods, parallel, quadprog, Rcpp, stats, utils
quadprog, igraph (>= 1.0), Matrix, parallel, methods, utils,
stats, graphics, grDevices, fastmatch, magrittr, Rcpp (>=
1.0.4)
fastmatch, graphics, grDevices, igraph (>= 1.0), magrittr,
Matrix, methods, parallel, quadprog, Rcpp (>= 1.0.4), stats,
utils
fastmatch, graphics, grDevices, igraph (>= 1.0), Matrix,
methods, parallel, quadprog, Rcpp, stats, utils
fastmatch, generics, graphics, grDevices, igraph (>= 1.0),
Matrix, methods, parallel, quadprog, Rcpp, stats, utils
circular, lubridate, plotly, pracma, signal, zeitgebr, zoo,
behavr
rjags, arrayhelpers, phase1RMD, MASS, reshape2, dplyr, plyr,
RColorBrewer, gridExtra, kableExtra, knitr
rjags, arrayhelpers, MASS, reshape2, plyr, dplyr,
RColorBrewer, gridExtra, kableExtra, knitr
methods, stats, graphics, reticulate (>= 1.7), ggplot2
methods, stats, graphics, reticulate (>= 1.4), ggplot2
methods, stats, graphics, reticulate (>= 1.8), ggplot2
methods, stats, graphics, reticulate (>= 1.8), ggplot2,
memoise
grid, RColorBrewer, scales, gtable, stats, grDevices, graphics
collapsibleTree, config (>= 0.3.1), dplyr, DT, golem (>=
0.3.1), plotly, purrr, readr, rintrojs, shinycssloaders,
shinydashboard, shinydashboardPlus
shiny, shinydashboard, leaflet, plotly, jsonlite, changepoint,
curl, zoo, utils, graphics, DT, stats, daymetr
shiny, jsonlite, changepoint, httr, zoo, utils, graphics,
stats, daymetr
shiny, jsonlite, changepoint, httr, zoo, utils, graphics,
stats, memoise, daymetr
jsonlite, changepoint, httr, zoo, utils, graphics, stats,
memoise, daymetr, MODISTools
Rcpp, tibble, dplyr, purrr, stringr, tidyr, ggplot2,
lubridate, data.table, spam, grid, gridExtra, magrittr, plyr,
reshape2, zoo, optimx, ucminf, numDeriv, grDevices, utils,
stats, DT
Rcpp, tibble, dplyr, purrr, stringr, tidyr, ggplot2,
lubridate, data.table, spam, grid, gridExtra, magrittr, plyr,
reshape2, zoo, readr, optimx, ucminf, numDeriv, grDevices,
utils, stats, shiny, jsonlite, DT, foreach, iterators
Rcpp, tibble, dplyr, purrr, stringr, tidyr, ggplot2,
lubridate, data.table, spam, grid, gridExtra, magrittr, plyr,
reshape2, zoo, optimx, ucminf, numDeriv, grDevices, utils,
stats, shiny, jsonlite, foreach, iterators
Rcpp, tibble, dplyr, purrr, stringr, tidyr, ggplot2,
lubridate, data.table, spam, grid, gridExtra, magrittr, plyr,
reshape2, zoo, optimx, ucminf, numDeriv, grDevices, utils,
stats, shiny, jsonlite, foreach, iterators, JuliaCall, methods
Rcpp, purrr, dplyr, magrittr, lubridate, data.table, zoo,
gridExtra, ggplot2, optimx, ucminf, numDeriv, JuliaCall,
methods, zeallot
Rcpp, purrr, dplyr, stringr, magrittr, lubridate, data.table,
zoo, gridExtra, ggplot2, optimx, ucminf, numDeriv, methods,
zeallot
dplyr, phenex, plyr, raster, stringr, rgdal
dplyr, phenex, plyr, raster, stringr, rgdal, doParallel
zoo, plyr, SDMTools, jpeg, stringr (>= 1.0.0), bcp,
strucchange, parallel, foreach, doParallel, iterators, gtools,
raster, sp
zoo, plyr, jpeg, stringr (>= 1.0.0), bcp, strucchange,
parallel, foreach, doParallel, iterators, gtools, raster, sp
splancs, deldir, plotrix, stats, grDevices, graphics
tuneR, phonTools, grDevices, utils, graphics, rmarkdown, xml2,
uchardet, tools
tuneR, phonTools, grDevices, DT, utils, graphics, rmarkdown
tuneR, phonTools, grDevices, utils, graphics, rmarkdown
tuneR, phonTools, grDevices, utils, graphics, rmarkdown, xml2
yaml, shiny, RCurl, git2r, rlist, httr, stringr
yaml, shiny, RCurl, git2r, rlist, httr, stringr, jsonlite
yaml, shiny, RCurl, git2r, rlist, httr, stringr, jsonlite,
SASxport
Rcpp (>= 0.12.1), methods, stats, stringr, utils
ade4, ape (>= 3.0), Rcpp (>= 0.11.0), rncl (>= 0.6.0), grid,
methods, stats, RNeXML
ape (>= 4.0), phylobase, htmlwidgets, magrittr, methods (>=
3.3.0)
ape (>= 4.0), phylobase, htmlwidgets, methods (>= 3.3.0)
ape, geiger, phytools, abind, phylolm, GPfit, dtw
Rcpp, ape, drc, dtw, geiger, geomorph (>= 3.0.0), GPfit,
Matrix, mvnmle, phylolm, phytools, rgl, doParallel, foreach,
parallel, grDevices, graphics, stats, utils
Rcpp, ape, drc, dtw, geiger, geomorph (>= 3.0.0), GPfit,
Matrix, mvnmle, phylolm, phytools, rgl, doSNOW, doParallel,
foreach, parallel, grDevices, graphics, stats, utils
Rcpp, ape, drc, dtw, geiger, geomorph (>= 3.0.0), GPfit,
Matrix, phylolm, phytools, rgl, doParallel, foreach, parallel,
grDevices, graphics, stats, utils
ape, DiagrammeR, dplyr, ggm, ggplot2, igraph, MuMIn, nlme,
purrr, tibble, tidyr
ape, DiagrammeR (>= 0.9.0), dplyr, ggm, ggplot2, igraph,
MuMIn, nlme, parallel, pbapply, purrr, tibble, tidyr
ape, dplyr, ggm, ggplot2, ggraph, igraph, MuMIn, nlme,
parallel, pbapply, purrr, tibble, tidyr
ape, phangorn, Matrix, betapart, fastmatch, parallel, methods,
raster, data.table, colorspace, cluster, rgeos, vegan, sp,
igraph
ape, phangorn, Matrix, betapart, parallel, methods, raster,
colorspace, vegan, sp, igraph, rgdal, rgeos
ape, phangorn, Matrix, betapart, parallel, methods, raster,
colorspace, vegan, sp, igraph, clustMixType, dismo,
randomForest, rgeos, rgdal
Rcpp (>= 0.11.0), adephylo, igraph, ape, phylobase, boot,
RCurl, graphics, grDevices, methods, stats, utils
Rcpp (>= 0.11.0), adephylo, igraph, ape, phylobase, boot, DBI,
graphics, grDevices, methods, stats, utils
R.methodsS3, R.oo, ape, compoisson, ggplot2
igraph, rentrez, XML, ggplot2, sys, treeman, treemapify,
R.utils
stats, ape, Rcpp, Matrix, methods, graphics, dplyr, lme4,
nloptr, gridExtra, mvtnorm, latticeExtra
stats, ape, Rcpp, Matrix, methods, graphics, dplyr, lme4,
nloptr, gridExtra, mvtnorm, latticeExtra, tidyr
celestial, docore, data.table, pracma, utils, MASS, cubature,
Rcpp
calibrate, msm, numDeriv, phangorn (>= 1.6-3)
calibrate, msm, numDeriv, phangorn (>= 1.6-3), plotrix
msm, numDeriv, phangorn (>= 1.6-3), plotrix
animation, mnormt, msm, numDeriv, phangorn (>= 1.6-3),
plotrix, scatterplot3d
animation, extrafont, mnormt, msm, numDeriv, phangorn (>=
1.6-3), plotrix, scatterplot3d
animation, clusterGeneration, mnormt, msm, numDeriv, phangorn
(>= 1.6-3), plotrix, scatterplot3d
animation, clusterGeneration, graphics, grDevices, methods,
mnormt, msm, numDeriv, phangorn (>= 1.6-3), plotrix,
scatterplot3d, stats, utils
animation, clusterGeneration, graphics, grDevices, methods,
mnormt, msm, numDeriv, phangorn (>= 2.0.4), plotrix,
scatterplot3d, stats, utils
animation, clusterGeneration, coda, combinat, graphics,
grDevices, methods, mnormt, msm, numDeriv, phangorn (>= 2.1.1),
plotrix, scatterplot3d, stats, utils
animation, clusterGeneration, coda, combinat, graphics,
grDevices, methods, mnormt, msm, nlme, numDeriv, phangorn (>=
2.1.1), plotrix, scatterplot3d, stats, utils
animation, clusterGeneration, coda, combinat, graphics,
grDevices, MASS, methods, mnormt, msm, nlme, numDeriv, phangorn
(>= 2.3.1), plotrix, scatterplot3d, stats, utils
animation, clusterGeneration, coda, combinat, expm, graphics,
grDevices, MASS, methods, mnormt, nlme, numDeriv, phangorn (>=
2.3.1), plotrix, scatterplot3d, stats, utils
animation, clusterGeneration, coda, combinat, expm, graphics,
grDevices, gtools, MASS, methods, mnormt, nlme, numDeriv,
phangorn (>= 2.3.1), plotrix, scatterplot3d, stats, utils
clusterGeneration, coda, combinat, expm, graphics, grDevices,
gtools, MASS, methods, mnormt, nlme, numDeriv, phangorn (>=
2.3.1), plotrix, scatterplot3d, stats, utils
clusterGeneration, coda, combinat, expm, graphics, grDevices,
MASS, methods, mnormt, nlme, numDeriv, phangorn (>= 2.3.1),
plotrix, scatterplot3d, stats, utils
clusterGeneration, coda, combinat, expm, graphics, grDevices,
MASS, methods, mnormt, nlme, numDeriv, optimParallel, parallel,
phangorn (>= 2.3.1), plotrix, scatterplot3d, stats, utils
Matrix (>= 1.0-0), numDeriv, limSolve (>= 1.5.2), rgl,
scatterplot3d, qvalue, Iso(>= 0.0-5), quadprog (>= 1.5-3),
kernlab
Matrix (>= 1.0-0), numDeriv, limSolve (>= 1.5.2), rgl,
scatterplot3d, qvalue, Iso(>= 0.0-5), quadprog (>= 1.5-3),
kernlab, LowRankQP, graphics, grDevices, methods, stats
Matrix (>= 1.0-0), numDeriv, limSolve (>= 1.5.2),
scatterplot3d, qvalue, Iso(>= 0.0-5), quadprog (>= 1.5-3),
kernlab, LowRankQP, graphics, grDevices, methods, stats
parallel, stats, utils, gpindex (>= 0.4.2)
ggplot2, stats, png, FrF2, DoE.base, FrF2.catlg128
purrr, rlang (>= 0.4.2), stringi, stringr
grid, grImport2, grDevices, purrr, R6, stringr, tibble, tools
grid, gridGeometry, grImport2, grDevices, purrr, jpeg, png,
R6, rlang, stringr, tibble, tools, utils
grid, grImport2, grDevices, purrr, jpeg, png, R6, stringr,
tibble, tools
grid, gridGeometry, grImport2, grDevices, purrr, jpeg, png,
R6, stringr, tibble, tools
backports, grid, gridGeometry, grImport2, grDevices, purrr,
jpeg, png, R6, stringr, tibble, tools, utils
ggm, lavaan, lmerTest, nlme, lme4, methods
ggm, lavaan, pbkrtest, nlme, lme4, methods
car, lme4, MASS, nlme, methods, pbkrtest
car, DiagrammeR, emmeans, igraph, lme4, MASS, methods, nlme
car, DiagrammeR, emmeans, igraph, lme4, multcomp, MASS,
methods, nlme
ggplot2, matrixcalc, MASS, sfsmisc, stats, gridExtra, numDeriv
gh, httr, jsonlite, git2r, fs, usethis, crayon, clisymbols,
magrittr, lubridate, memoise
gh, httr, jsonlite, fs, crayon, clisymbols, magrittr,
lubridate, memoise
gh, httr, jsonlite, fs, crayon, clisymbols, lubridate, memoise
cli, glue, gh, httr, jsonlite, fs, lubridate, memoise
cli, crayon (>= 1.3.4), methods, rlang, utf8
cli, crayon (>= 1.3.4), methods, rlang, utf8 (>= 1.1.3)
cli, crayon (>= 1.3.4), ellipsis, fansi, lifecycle, rlang (>=
0.3.0), utf8 (>= 1.1.0), vctrs (>= 0.2.0)
cli, crayon (>= 1.3.4), ellipsis, fansi, lifecycle, rlang (>=
0.3.0), utf8 (>= 1.1.0), utils, vctrs (>= 0.2.0)
stats, fastcluster, lubridate, ggplot2, reshape2, scales
stats, fastcluster, lubridate, ggplot2, reshape2, scales,
foreach, doParallel, parallel
stats, fastcluster, lubridate, ggplot2, reshape2, scales,
foreach, doParallel, parallel, iterators
stats, fastcluster, lubridate, ggplot2, reshape2, scales,
parallel, Rcpp (>= 0.12.9)
stats, fastcluster, lubridate, ggplot2, reshape2, scales,
parallel, Rcpp (>= 0.12.9),
dplyr, stringr, tibble, tictoc, tidyselect, data.table,
lubridate, plotly, reshape2
dplyr, uuid, httr, RCurl, XML, rjson, jsonlite, plyr
dplyr, uuid, httr, RCurl, XML, rjson, jsonlite
data.table, openssl, magrittr, purrr, uuid, httr, jsonlite,
rjson
data.table (>= 1.10.0), openssl, magrittr, purrr, uuid, httr,
jsonlite, rjson
base64enc, httr, jsonlite, magrittr, openssl, withr, yaml, zip
base64enc, httr, jsonlite, magrittr, openssl, rappdirs, withr,
yaml, zip
base64enc, crayon, httr, jsonlite, magrittr, mime, openssl,
rappdirs, withr, yaml, zip
backports, base64enc, crayon, digest, filelock, httr,
jsonlite, magrittr, mime, openssl, rappdirs, withr, yaml, zip
backports, base64enc, crayon, digest, filelock, fs, httr,
jsonlite, magrittr, mime, openssl, rappdirs, stats, withr,
yaml, zip
arrow, cli, digest, ellipsis, filelock, fs, glue, httr,
jsonlite, lifecycle, magrittr, mime, openssl, rappdirs, rlang
(>= 0.4.10), tibble, whisker, withr, yaml, zip
arrow, cli, digest, ellipsis, filelock, fs, glue, httr,
jsonlite, lifecycle, magrittr, mime, openssl, rappdirs, rlang
(>= 0.4.10), tibble, whisker, withr (>= 2.4.3), yaml, zip
cli, digest, ellipsis, filelock, fs, glue, httr, jsonlite,
lifecycle, magrittr, mime, openssl, rappdirs, rlang (>=
0.4.10), tibble, whisker, withr (>= 2.4.3), yaml, zip
magrittr, miniUI (>= 0.1.1), rstudioapi (>= 0.4), shiny (>=
0.13), stringr
plyr, MASS, ggplot2, Rcpp, RcppArmadillo
ape, beautier (>= 2.6.2), beastier (>= 2.4.6), DDD, forcats,
magrittr, mauricer (>= 2.5), mcbette (>= 1.7), nodeSub,
phangorn, phytools, plyr, pryr, rappdirs, readr, stringr, TESS,
tibble, tidyr, tracerer (>= 2.0.2), xtable
ape, beautier (>= 2.6.2), beastier (>= 2.4.6), DDD, forcats,
magrittr, mauricer (>= 2.5), mcbette (>= 1.7), nodeSub,
phangorn, phytools, plyr, pryr, readr, stringr, TESS, tibble,
tidyr, tracerer (>= 2.0.2), xtable
MASS, rgl, mgcv, hexbin, lubridate, stringr, plyr, reshape
MASS, rgl, mgcv, hexbin, lubridate, stringr, plyr
XML2R (>= 0.0.4), plyr, MASS, hexbin, rgl, mgcv, lubridate
XML2R (>= 0.0.6), plyr, MASS, hexbin, rgl, mgcv, lubridate
XML2R (>= 0.0.6), plyr, MASS, hexbin, mgcv, lubridate
XML2R (>= 0.0.6), plyr, MASS, hexbin, mgcv
cluster, mclust, MASS, corpcor, runjags, rstan
cluster, mclust, MASS, corpcor, runjags, rstan, bayesmix,
rjags, mvtnorm, RcmdrMisc, bayesplot
cluster, mclust, MASS, corpcor, runjags, rstan, bayesmix,
rjags, mvtnorm, bayesplot
assertthat, dplyr, dbplyr (>= 1.2.1), DBI, magrittr, purrr,
rlang, tidyselect, tidyr, lubridate, colorspace
urltools, httr, rjson, tibble, purrr, lubridate, magrittr,
dplyr, rlang, stringr, readr, digest, fs
httr, rjson, tibble, purrr, lubridate, magrittr, dplyr, rlang,
stringr, readr, digest, fs
httr, rjson, tibble, purrr, lubridate, magrittr, dplyr, rlang,
stringr, readr (>= 2.1.0), digest, fs, tidyr, glue
ArgumentCheck, broom, dplyr, knitr, lazyWeave, magrittr, tidyr
ArgumentCheck, broom, dplyr, Hmisc (>= 3.14-6), htmltools,
knitr, lazyWeave, magrittr, stringr, tidyr
ArgumentCheck, broom, checkmate, dplyr, Hmisc (>= 3.14-6),
htmltools, knitr, lazyWeave, magrittr, stringr, tidyr
broom, checkmate, dplyr, Hmisc (>= 3.14-6), htmltools, knitr,
lazyWeave, magrittr, stringr, tidyr
broom, checkmate (>= 1.8.0), dplyr, Hmisc (>= 3.14-6),
htmltools, knitr, magrittr, scales, stringr, tidyr
broom, checkmate (>= 1.8.0), dplyr, htmltools, knitr,
labelVector, magrittr, scales, tidyr
broom, checkmate (>= 1.8.0), htmltools, knitr, labelVector,
magrittr, reshape2, scales
callr (>= 2.0.0), crayon, desc, R6, rprojroot, withr (>=
2.1.2)
callr (>= 2.0.0), cli, crayon, desc, prettyunits, R6,
rprojroot, withr (>= 2.1.2)
callr (>= 3.2.0), cli, crayon, desc, prettyunits, R6,
rprojroot, withr (>= 2.1.2)
callr (>= 3.2.0), cli, crayon, desc, prettyunits, R6,
rprojroot, withr (>= 2.3.0)
callr (>= 3.2.0), cli (>= 3.4.0), crayon, desc, prettyunits,
processx, R6, rprojroot, withr (>= 2.3.0)
assertthat, cli, cliapp, curl (>= 3.2), crayon, digest,
filelock, glue, prettyunits, R6, rappdirs, rematch2, rlang,
tibble, tools, utils, uuid, withr
assertthat, callr (>= 2.0.4.9000), cli (>= 2.0.0), curl (>=
3.2), digest, filelock, glue, prettyunits, R6, processx (>=
3.3.0.9001), rappdirs, rlang, tibble, tools, utils, uuid
assertthat, callr (>= 2.0.4.9000), cli (>= 2.0.0), curl (>=
3.2), digest, filelock, glue, jsonlite, prettyunits, R6,
processx (>= 3.3.0.9001), rappdirs, rlang, tibble, tools,
utils, uuid
callr (>= 2.0.4.9000), cli (>= 3.2.0), curl (>= 3.2),
filelock, glue, jsonlite, prettyunits, R6, processx (>=
3.3.0.9001), rappdirs, tools, utils
callr (>= 2.0.4.9000), cli (>= 3.2.0), curl (>= 3.2),
filelock, glue, jsonlite, prettyunits, processx (>=
3.3.0.9001), R6, rappdirs, tools, utils
callr (>= 2.0.4.9000), cli (>= 3.2.0), curl (>= 3.2),
filelock, jsonlite, prettyunits, processx (>= 3.3.0.9001), R6,
rappdirs, tools, utils
visNetwork, dplyr, magrittr, viridisLite, scales, utils
callr (>= 3.3.1), cli (>= 2.1.0), crayon, curl, desc (>=
1.2.0), filelock (>= 1.0.2), glue, jsonlite, lpSolve, pkgbuild
(>= 1.0.2), pkgcache (>= 1.2.0), prettyunits (>= 1.1.1),
processx (>= 3.4.2), ps, rematch2, rprojroot, R6, stats,
tibble, utils, withr (>= 2.1.1), zip (>= 2.1.0)
callr (>= 3.3.1), cli (>= 2.1.0), crayon, curl, desc (>=
1.2.0), filelock (>= 1.0.2), glue, jsonlite, lpSolve, pkgbuild
(>= 1.0.2), pkgcache (>= 1.3.0), prettyunits (>= 1.1.1),
processx (>= 3.4.2), ps, rematch2, rprojroot, R6, stats,
tibble, utils, withr (>= 2.1.1), zip (>= 2.1.0)
callr (>= 3.3.1), cli (>= 2.1.0), crayon, curl, desc (>=
1.2.0), filelock (>= 1.0.2), glue, jsonlite, lpSolve, pkgbuild
(>= 1.0.2), pkgcache (>= 2.0.0), prettyunits (>= 1.1.1),
processx (>= 3.4.2), ps, rprojroot, R6, stats, utils, withr (>=
2.1.1), zip (>= 2.1.0)
callr (>= 3.3.1), cli (>= 2.1.0), crayon, curl, desc (>=
1.2.0), filelock (>= 1.0.2), glue, jsonlite, lpSolve, pkgbuild
(>= 1.0.2), pkgcache (>= 2.0.0), prettyunits (>= 1.1.1),
processx (>= 3.4.2), ps, R6, rprojroot, stats, utils, withr (>=
2.1.1), zip (>= 2.1.0)
callr (>= 2.0.2), cli, crayon, desc, devtools, digest,
evaluate, fs (>= 1.2.0), highlight, httr, magrittr, MASS,
memoise, purrr, R6, rematch, rlang (>= 0.2.0), rmarkdown (>=
1.1.9007), roxygen2, rsconnect, rstudioapi, tibble, tools,
whisker, xml2 (>= 1.1.1), yaml
callr (>= 2.0.2), cli, crayon, desc, digest, evaluate, fs (>=
1.2.0), fansi, highlight, httr, magrittr, MASS, memoise,
openssl, pkgload (>= 1.0.2), purrr, processx, R6, rematch2,
rlang (>= 0.2.0), rmarkdown (>= 1.1.9007), roxygen2, rsconnect,
rstudioapi, tibble, tools, whisker, withr, xml2 (>= 1.1.1),
yaml
callr (>= 2.0.2), cli, crayon, desc, digest, evaluate, fs (>=
1.2.0), fansi, highlight, httr, magrittr, MASS, memoise,
openssl, purrr, processx, rematch2, rlang (>= 0.3.0), rmarkdown
(>= 1.1.9007), rstudioapi, tibble, tools, whisker, withr, xml2
(>= 1.1.1), yaml
callr (>= 2.0.2), cli, crayon, desc, digest, evaluate, fs (>=
1.3.0), fansi, highlight, httr, magrittr, MASS, memoise,
openssl, purrr, processx, rematch2, rlang (>= 0.3.0), rmarkdown
(>= 1.1.9007), rstudioapi, tibble, tools, whisker, withr, xml2
(>= 1.1.1), yaml
callr (>= 2.0.2), cli, crayon, desc, digest, evaluate, fs (>=
1.3.0), fansi, highlight, httr, magrittr, MASS, memoise,
openssl, purrr, processx, rematch2, rlang (>= 0.3.0), rmarkdown
(>= 1.1.9007), rstudioapi, tibble, tools, whisker, withr, xml2
(>= 1.3.1), yaml
callr (>= 2.0.2), crayon, desc, digest, downlit, fs (>=
1.3.0), httr (>= 1.4.2), magrittr, memoise, openssl, purrr,
ragg, rematch2, rlang (>= 0.3.0), rmarkdown (>= 1.1.9007),
tibble, tools, whisker, withr, xml2 (>= 1.3.1), yaml
bslib, callr (>= 2.0.2), crayon, desc, digest, downlit (>=
0.4.0), fs (>= 1.4.0), httr (>= 1.4.2), jsonlite, magrittr,
memoise, purrr, ragg, rlang (>= 0.4.0), rmarkdown (>=
1.1.9007), tibble, whisker, withr, xml2 (>= 1.3.1), yaml
bslib (>= 0.3.1), callr (>= 2.0.2), crayon, desc, digest,
downlit (>= 0.4.0), fs (>= 1.4.0), httr (>= 1.4.2), jsonlite,
magrittr, memoise, purrr, ragg, rlang (>= 0.4.0), rmarkdown (>=
1.1.9007), tibble, whisker, withr (>= 2.4.3), xml2 (>= 1.3.1),
yaml
bslib (>= 0.3.1), callr (>= 2.0.2), crayon, desc, digest,
downlit (>= 0.4.0), fs (>= 1.4.0), httr (>= 1.4.2), jsonlite,
magrittr, memoise, purrr, ragg, rlang (>= 1.0.0), rmarkdown (>=
1.1.9007), tibble, whisker, withr (>= 2.4.3), xml2 (>= 1.3.1),
yaml
bslib (>= 0.3.1), callr (>= 2.0.2), cli, desc, digest, downlit
(>= 0.4.0), fs (>= 1.4.0), httr (>= 1.4.2), jsonlite, magrittr,
memoise, purrr, ragg, rlang (>= 1.0.0), rmarkdown (>=
1.1.9007), tibble, whisker, withr (>= 2.4.3), xml2 (>= 1.3.1),
yaml
desc, methods, pkgbuild, rlang, rprojroot, rstudioapi, utils,
withr
cli, crayon, desc, methods, pkgbuild, rlang, rprojroot,
rstudioapi, utils, withr
cli, crayon, desc, methods, rlang, rprojroot, rstudioapi,
utils, withr
cli (>= 3.3.0), crayon, desc, fs, glue, methods, rlang (>=
1.0.3), rprojroot, utils, withr (>= 2.4.3)
codetools, digest, stringr, methods, xtable
codetools, digest, stringr, methods, xtable, grDevices
tools, codetools, digest, stringr, xtable, grDevices
methods, tools, codetools, digest, stringr, xtable, grDevices
tools, grDevices, utils, graphics, codetools, digest, stringi,
magrittr, stringr, xtable, withr, bibtex (>= 0.4)
tools, grDevices, utils, graphics, codetools, digest, stringi,
magrittr, stringr, xtable, withr, bibtex (>= 0.4), assertthat
tools, grDevices, utils, graphics, codetools, digest, stringr,
xtable, withr, assertthat
ComplexHeatmap (>= 2.0.0), GetoptLong, utils, grid, crayon,
callr
ComplexHeatmap (>= 2.0.0), GetoptLong, utils, grid, hash,
methods, BiocManager, brew
ComplexHeatmap (>= 2.7.1), GetoptLong, GlobalOptions, utils,
grid, hash, methods, BiocManager, brew, BiocVersion
ComplexHeatmap (>= 2.8.0), GetoptLong, GlobalOptions, utils,
grid, hash, methods, BiocManager, brew, BiocVersion
ComplexHeatmap, GetoptLong, GlobalOptions, utils, grid, hash,
methods, BiocManager, brew, BiocVersion
ComplexHeatmap (>= 2.6.0), GetoptLong, GlobalOptions, utils,
grid, hash, methods, BiocManager, brew, BiocVersion
assertthat, covr, data.table, DT, futile.logger, igraph,
knitr, magrittr, methods, mvbutils, R6, rmarkdown, visNetwork
assertthat, covr, data.table, DT, futile.logger, igraph,
knitr, magrittr, methods, mvbutils, R6, rmarkdown(>= 1.9),
tools, visNetwork
assertthat, covr, data.table, DT, futile.logger, igraph,
knitr, magrittr, methods, R6, rmarkdown(>= 1.9), tools,
visNetwork
assertthat, covr, data.table, DT, futile.logger, glue, igraph,
knitr, magrittr, methods, R6, rlang, rmarkdown(>= 1.9), tools,
visNetwork
magrittr, httr, jsonlite, parsedate, prettyunits
assertthat, httr, jsonlite, parsedate, prettyunits, tibble
assertthat, curl, jsonlite, parsedate, prettyunits, tibble
curl, jsonlite, parsedate (>= 1.3.0), prettyunits
brio, checkmate, dplyr, fs, igraph, methods, readr, sys, withr
data.table, deSolve, dplyr, getPass, ggplot2, magrittr,
reshape
ggplot2, data.table, deSolve, dplyr, getPass, magrittr,
reshape
ggplot2, data.table, deSolve, dplyr, getPass, magrittr,
foreach, parallel, doParallel, reshape
ggplot2, data.table, deSolve, dplyr, getPass, magrittr,
foreach, parallel, doParallel, reshape2
ggplot2, data.table, deSolve, foreach, parallel, doParallel
RCurl, jsonlite, base64enc, digest, urltools, stringi
dplyr, tidyr, sp, rgdal, geosphere, data.table, rlang,
googleway, stringr, stats, hms
gdalUtils, htmltools, htmlwidgets, lattice, png, raster,
viridisLite
htmltools, htmlwidgets, lattice, png, raster, viridisLite
Rcpp (>= 0.9.5), RcppArmadillo (>= 0.2.3), statmod, cubature,
reshape2, plyr
Rcpp, statmod, cubature, reshape2, plyr, ggplot2
tidyverse, caret, lubridate, Matrix, MESS, dplyr, pROC, stats
stats, conf.design, utils, bit64, Rcpp (>= 0.12.7)
dplyr, ggplot2, plyr, lazyeval, raster, RColorBrewer, MASS,
viridis
graphics, gridBase, grDevices, RGtk2 (>= 2.10.11), cairoDevice, gWidgets, gWidgetsRGtk2
lattice (>= 0.16), graphics, gridBase, grDevices, RGtk2, cairoDevice, gWidgets
lattice (>= 0.16), graphics, gridBase, grDevices, RGtk2, cairoDevice, gWidgets, gWidgetsRGtk2
RGtk2 (>= 2.10.11), gridBase, grDevices, utils, graphics
RGtk2 (>= 2.10.11), gridBase, grDevices, graphics, utils
RGtk2 (>= 2.10.11), gWidgets, gridBase, grDevices, graphics, utils
RGtk2 (>= 2.10.11), gridBase, graphics, grDevices, utils,
RGtk2 (>= 2.10.11), gWidgets (>= 0.0-30), gridBase, grDevices, graphics, stats, utils
RGtk2 (>= 2.10.11), gWidgets (>= 0.0-30), gridBase, grDevices,
graphics, stats, utils
RGtk2 (>= 2.20.1), gWidgets (>= 0.0-30), gridBase, grDevices,
graphics, stats, utils
RGtk2 (>= 2.10.11), gridBase, graphics, grDevices, utils
DBI, dplyr, dbplyr, RSQLite, crul, jsonlite, gistr, rappdirs
shiny, ggplot2, shinyBS, shinyWidgets, miniUI, shinydashboard,
rstudioapi, shinythemes, data.table, rhandsontable, deSolve,
truncdist, reshape2, dplyr, readxl, gdata, devtools, RSQLite,
formatR, plotly, magrittr, sqldf, utils, stats, DT, shinyjs,
V8, httk
shiny, ggplot2, shinyBS, shinyWidgets, miniUI, shinydashboard,
rstudioapi, shinythemes, rhandsontable, deSolve, truncdist,
reshape2, dplyr, readxl, gdata, devtools, RSQLite, formatR,
plotly, magrittr, sqldf, utils, stats, DT, shinyjs, V8, httk,
NonCompart, stringr, doParallel, foreach, pracma, shinybusy,
data.table
shiny, ggplot2, shinyBS, shinyWidgets, miniUI, shinydashboard,
rstudioapi, shinythemes, rhandsontable, deSolve, truncdist,
reshape2, dplyr, readxl, gdata, devtools, RSQLite, formatR,
plotly, magrittr, sqldf, utils, stats, DT, shinyjs, V8, httk,
NonCompart, stringr, doParallel, foreach, pracma, shinybusy,
data.table, tidyr, shinyalert, shinyFiles, officer, DiagrammeR,
DiagrammeRsvg, rsvg, devEMF
gWidgets, limma, gWidgetsRGtk2, tcltk, cairoDevice, grDevices,
graphics, stats
gWidgets, limma, RGtk2, gWidgetsRGtk2, tcltk, cairoDevice,
grDevices, graphics, stats
limma, tcltk, RGtk2, gWidgets2, gWidgets2RGtk2, cairoDevice,
grDevices, graphics, stats
gWidgets2, tcltk, gWidgets2tcltk, tkrplot, limma,
RColorBrewer, grDevices, graphics, stats
methods, optparse, data.table (>= 1.11.0), R.utils, ggplot2,
ggforce, ggrepel, cowplot, UpSetR, dplyr
methods, optparse, data.table (>= 1.11.0), R.utils, ggplot2,
ggforce, ggrepel, cowplot, UpSetR, dplyr, sys
methods, optparse, data.table (>= 1.11.0), R.utils, ggplot2,
ggforce, ggrepel, cowplot, UpSetR, dplyr, igraph (>= 1.2.4),
sys
MASS, bdsmatrix, zoo, nlme, sandwich, lattice, car, lmtest
MASS, bdsmatrix, zoo, nlme, sandwich, lattice, lmtest, maxLik
MASS, bdsmatrix, zoo, nlme, sandwich, lattice, lmtest, maxLik,
Rdpack, Formula, stats
MASS, bdsmatrix, collapse (>= 1.6.0), zoo, nlme, sandwich,
lattice, lmtest, maxLik, Rdpack, Formula, stats
MASS, bdsmatrix, collapse (>= 1.8.0), zoo, nlme, sandwich,
lattice, lmtest, maxLik, Rdpack, Formula, stats
data.table, R6, uuid, foreach, fs, glue, usethis, purrr,
utils, digest, stats
misc3d, stats, graphics, grDevices, methods
magrittr (>= 1.5), ggplot2 (>= 3.1.0), graphics, reshape2 (>=
1.4.3), stats, utils
ggplot2 (>= 3.1.0), graphics, magrittr (>= 1.5), reshape2 (>=
1.4.3), stats, utils
ellipse, ggplot2 (>= 3.1.0), graphics, magrittr (>= 1.5),
reshape2 (>= 1.4.3), stats, utils
dplyr, ellipse, forcats, ggplot2 (>= 3.3.0), graphics,
grDevices, lifecycle, magrittr (>= 1.5), purrr, Rdpack, stats,
tibble, tidyr, tidyselect, utils
dplyr, ellipse, forcats, generics, ggplot2 (>= 3.3.0),
graphics, grDevices, lifecycle, magrittr (>= 1.5), purrr,
Rdpack, stats, tibble, tidyr, tidyselect, utils
dplyr, ellipse, forcats, generics, ggplot2 (>= 3.3.0),
graphics, grDevices, lifecycle, magrittr (>= 1.5), purrr,
Rdpack, stats, stringr, tibble, tidyr, tidyselect, utils
lattice (>= 0.16), grid, grDevices, graphics
dplyr, ggplot2 (>= 3.1.0), mapproj, plotly, purrr, rlang
methods, graphics, wesanderson, amerika, ggplot2
methods, XML, sp, rgdal, spacetime, colorspace, plotrix,
raster, dismo, aqp, pixmap, plyr, stringr, colorRamps, Hmisc,
scales, zoo, xts, RColorBrewer
methods, XML, sp, rgdal, spacetime, colorspace, plotrix,
raster, dismo, aqp, pixmap, plyr, stringr, colorRamps, Hmisc,
scales, zoo, xts, RColorBrewer, RSAGA
methods, XML, sp, raster, rgdal, spacetime, colorspace,
plotrix, dismo, aqp, pixmap, plyr, stringr, colorRamps, scales,
gstat, zoo, xts, RColorBrewer, RSAGA
methods, XML, sp, raster, rgdal, spacetime, colorspace,
plotrix, dismo, aqp, pixmap, plyr, stringr, colorRamps, scales,
gstat, zoo, xts, RColorBrewer, RSAGA, classInt
methods, XML, sp, raster, rgdal, spacetime, colorspace,
plotrix, dismo, aqp, pixmap, plyr, stringr, colorRamps, scales,
gstat, zoo, RColorBrewer, RSAGA, classInt
methods, tools, utils, XML, sp, raster, rgdal, spacetime,
colorspace, plotrix, dismo, aqp, pixmap, plyr, stringr,
colorRamps, scales, gstat, zoo, RColorBrewer, RSAGA, classInt
methods, tools, utils, XML, sp, raster, rgdal, aqp, spacetime,
colorspace, plotrix, dismo, pixmap, plyr, stringr, colorRamps,
scales, gstat, zoo, RColorBrewer, RSAGA, classInt
methods, tools, utils, XML, landmap, sp, raster, rgdal, aqp,
gstat, spacetime, colorspace, plotrix, dismo, pixmap, plyr,
stringr, colorRamps, scales, zoo, RColorBrewer, RSAGA,
classInt, sf, stars
methods, tools, gstat, colorRamps, pixmap, utils, XML, dismo,
landmap, sp, raster, rgdal, aqp, spacetime, colorspace, plyr,
stringr, scales, zoo, RColorBrewer, classInt, sf, stars
methods, tools, gstat, colorRamps, pixmap, utils, XML, dismo,
sp, raster, rgdal, aqp, spacetime, colorspace, plyr, stringr,
scales, zoo, RColorBrewer, classInt, sf, stars
methods, grid, gridSVG, shiny, plyr, rlang
graphics, methods, stats, MplusAutomation, Rcpp, plotrix
graphics, magrittr, rlang, scales, methods, utils
dplyr, gganimate, ggplot2 (>= 3.1.0), lazyeval, lubridate,
magrittr, mapdata, maps (>= 3.2.0), maptools, plot3D, rgdal,
rgeos, raster, scales, sf, tidyr
dplyr, gganimate, ggplot2 (>= 3.1.0), lazyeval, lubridate,
magrittr, maps, maptools, raster, rgdal, rgeos, scales, sf,
tidyr
dplyr, gganimate, ggplot2 (>= 3.1.0), lazyeval, lubridate,
magrittr, maps, raster, rerddap (>= 0.6.0), rgeos, scales, sf,
tidyr
cmocean, dplyr, gganimate, ggplot2 (>= 3.1.0), lazyeval,
lubridate, magrittr, maps, raster, rerddap (>= 0.6.0), rgeos,
scales, sf, tidyr, viridis
cmocean, dplyr, gganimate, ggnewscale (>= 0.4.1), ggplot2 (>=
3.1.0), lazyeval, lubridate, magrittr, maps, raster, rerddap
(>= 0.6.0), rgeos, scales, sf, tidyr, viridis
cmocean, dplyr, gganimate, ggnewscale, ggplot2 (>= 3.1.0),
lazyeval, lubridate, magrittr, maps, raster, rerddap (>=
0.8.0), scales, sf, tidyr, viridis
plyr, ggfittext, magick, grid, gridExtra
plyr, ggfittext, magick, grid, gridExtra, scales
plyr, ggfittext (>= 0.8.1), magick, grid, gridExtra, scales
plyr, ggfittext (>= 0.8.1), magick, grid, gridExtra, scales,
farver
scales, httr, jsonlite, magrittr, digest, viridis, base64enc,
htmlwidgets, plyr
scales, httr, jsonlite, magrittr, digest, viridis, base64enc,
htmlwidgets, tidyr, plyr
scales, httr, jsonlite, magrittr, digest, viridis, base64enc,
htmlwidgets, tidyr, plyr, hexbin
tools, scales, httr (>= 1.3.0), jsonlite (>= 1.6), magrittr,
digest, viridisLite, base64enc, htmltools (>= 0.3.6),
htmlwidgets (>= 1.5.2.9001), tidyr (>= 1.0.0), RColorBrewer,
dplyr, vctrs, tibble, lazyeval (>= 0.2.0), rlang (>= 0.4.10),
crosstalk, purrr, data.table, promises
scales, httr, jsonlite, magrittr, digest, viridisLite,
base64enc, htmlwidgets, tidyr, dplyr, tibble, hexbin, lazyeval
(>= 0.2.0), purrr
tools, scales, httr, jsonlite, magrittr, digest, viridisLite,
base64enc, htmltools, htmlwidgets (>= 0.8), tidyr, hexbin,
RColorBrewer, dplyr, tibble, lazyeval (>= 0.2.0), crosstalk,
purrr
tools, scales, httr, jsonlite, magrittr, digest, viridisLite,
base64enc, htmltools, htmlwidgets (>= 0.8), tidyr, hexbin,
RColorBrewer, dplyr, tibble, lazyeval (>= 0.2.0), crosstalk,
purrr, data.table
tools, scales, httr, jsonlite, magrittr, digest, viridisLite,
base64enc, htmltools, htmlwidgets (>= 0.9), tidyr, hexbin,
RColorBrewer, dplyr, tibble, lazyeval (>= 0.2.0), crosstalk,
purrr, data.table
tools, scales, httr, jsonlite, magrittr, digest, viridisLite,
base64enc, htmltools, htmlwidgets (>= 1.2), tidyr, hexbin,
RColorBrewer, dplyr, tibble, lazyeval (>= 0.2.0), rlang,
crosstalk, purrr, data.table, promises
tools, scales, httr, jsonlite (>= 1.6), magrittr, digest,
viridisLite, base64enc, htmltools (>= 0.3.6), htmlwidgets (>=
1.3), tidyr, hexbin, RColorBrewer, dplyr, tibble, lazyeval (>=
0.2.0), rlang, crosstalk, purrr, data.table, promises
tools, scales, httr (>= 1.3.0), jsonlite (>= 1.6), magrittr,
digest, viridisLite, base64enc, htmltools (>= 0.3.6),
htmlwidgets (>= 1.5.2.9001), tidyr, RColorBrewer, dplyr, vctrs,
tibble, lazyeval (>= 0.2.0), rlang, crosstalk, purrr,
data.table, promises
tools, scales, httr (>= 1.3.0), jsonlite (>= 1.6), magrittr,
digest, viridisLite, base64enc, htmltools (>= 0.3.6),
htmlwidgets (>= 1.5.2.9001), tidyr, RColorBrewer, dplyr, vctrs,
tibble, lazyeval (>= 0.2.0), rlang (>= 0.4.10), crosstalk,
purrr, data.table, promises
methods, wesanderson, amerika, ggplot2, dplyr, patchwork
mvtnorm, boot, Formula, plsdof, MASS, plsRglm, betareg
mvtnorm, boot, Formula, plsdof, MASS, betareg, plsRglm
mvtnorm, boot, Formula, plsdof, MASS, plsRglm, betareg,
methods
mvtnorm, boot, Formula, MASS, plsRglm, betareg, methods
boot, plsRglm, lars, survival, pls, spls, kernlab
boot, plsRglm, lars, survival, pls, kernlab, mixOmics
boot, plsRglm, lars, survival, pls, spls, kernlab, mixOmics
survival, plsRglm, lars, pls, kernlab, mixOmics, risksetROC,
survcomp, survAUC, rms
grDevices, graphics, genalg, mvtnorm, bdsmatrix, pls, MASS,
progress, parallel, stats
grDevices, graphics, genalg, mvtnorm, bdsmatrix, MASS,
progress, parallel, stats
grDevices, graphics, genalg, mvtnorm, bdsmatrix, MASS,
progress, parallel, stats, MSQC, praznik
MASS, boot, parallel, reshape2, plyr, fields, RhpcBLASctl
tibble, mixOmics, dplyr, tidyr, generics, magrittr, purrr,
rlang
dplyr, generics, magrittr, mixOmics, purrr, rlang, tibble,
tidyr
utils, lhs, MASS, graphics, grDevices, stats
R6 (>= 2.0.0), stringi (>= 0.3.0), jsonlite (>= 0.9.16),
webutils (>= 1.1), httpuv (>= 1.5.0), crayon, promises (>=
1.1.0), sodium, swagger (>= 3.33.0), magrittr, mime, lifecycle
analogsea (>= 0.9.4), ssh, jsonlite, lifecycle, utils
plumber (>= 1.1.0), magrittr, curl, httpuv, jsonlite, later,
promises, rlang, htmltools, debugme, stringi, markdown,
urltools, glue, utils, httr, knitr
utils, methods, objectSignals (>= 0.10.2)
reticulate (>= 1.11), bupaR, petrinetR, purrr, stringr
dplyr (>= 0.5.0), data.table (>= 1.9.8), DiagrammeR (>=
0.9.0), stringr
dplyr (>= 0.5.0), lubridate, data.table (>= 1.9.6), DiagrammeR
(>= 1.0.0), stringr, shiny
dplyr, purrr, rlang (>= 0.2.0), tibble, glue
dplyr, purrr, rlang (>= 0.2.0), tibble, glue, foolbox,
magrittr
ape, geiger, reshape, snowfall, TreeSim, methods, ouch
ape, geiger, snowfall, TreeSim, methods, ouch, reshape2
dplyr, geiger, ggplot2, parallel, ouch, tidyr
RColorBrewer, shiny, rmarkdown, rcdk, stats, utils
RColorBrewer, stats, graphics, utils, igraph, enviGCMS
RColorBrewer, stats, graphics, utils, data.table, igraph,
enviGCMS
lubridate, magrittr, pillar, tidyr, tibble, tidyselect, utils,
vctrs, rlang (>= 0.4.0)
dplyr, lubridate, magrittr, RCurl, tidyr, stringr
dplyr, httr, lubridate, magrittr, RCurl, tidyr, stringr
curl, dplyr, httr, lubridate, magrittr, RCurl, tidyr, stringr
mvtnorm, Quandl, grDevices, graphics, stats
plm, pracma, MASS, Matrix, minqa, dplyr, data.table, moments,
magrittr, ggplot2, stats, utils, graphics
coda, condMVNorm, MASS, MCMCpack, mvtnorm, stats
checkmate, coda, condMVNorm, MASS, MCMCpack, mvtnorm, stats
grid, stats, utils, MASS, XML, stringr, ggplot2, xpose,
magrittr, GGally, plyr, PKNCA
grid, stats, utils, MASS, XML, stringr, ggplot2, magrittr,
GGally, plyr, PKNCA
ggplot2, ggrepel, gridExtra, chron, xml2, dplyr (>= 0.8.5)
ggplot2, ggrepel, gridExtra, chron, xml2, dplyr (>= 0.8.5),
tibble, gghalves, ggdist
httr, purrr, tibble, dplyr, glue, jsonlite, magrittr, usethis
BayesLogit, ggplot2, logistf, plyr, stats, utils, grDevices
ggplot2, logistf, plyr, stats, utils, grDevices
assertive.base, assertive.properties, assertive.types,
assertive.files, devtools, dplyr, magrittr, stringi, tibble,
tools, utils
assertive.base, assertive.properties, assertive.types,
assertive.files, assertive.sets, assertive.strings, devtools,
digest, dplyr, magrittr, R6, stringi, tibble, tools, utils,
whoami
assertive.base, assertive.properties, assertive.types,
assertive.files, assertive.sets, assertive.strings, devtools,
digest, dplyr, magrittr, purrr, R6, stringi, tibble, tools,
utils, whoami
Rcpp (>= 0.12.19), Matrix, SparseM, methods, nonneg.cg
rlang, tibble, purrr, stats, dplyr, tidyr, glue
dplyr, generics, glue, purrr, rlang, stats, tibble, tidyr
geofacet, dplyr, tidyr (>= 1.0.0), magrittr, formattable,
readr, stringr, rvest, xml2, glue, tibble, DT, attempt, curl
(>= 4.2), assertthat, gt, forcats, ggplot2, ggthemes, purrr,
scales, rlang (>= 0.4.3), RColorBrewer, grDevices
geofacet (>= 0.2.0), dplyr, tidyr (>= 1.1.0), magrittr, readr,
stringr, rvest, xml2, glue, tibble, DT, attempt, curl (>= 4.2),
assertthat, gt, forcats, ggplot2, ggthemes, purrr, scales,
rlang (>= 0.4.3), RColorBrewer, grDevices, cowplot, sf,
wordcloud2, jsonlite, ggtext, lubridate, ggparliament, httr
geofacet (>= 0.2.0), dplyr, tidyr (>= 1.1.0), magrittr,
formattable, readr, stringr, rvest, xml2, glue, tibble, DT,
attempt, curl (>= 4.2), assertthat, gt, forcats, ggplot2,
ggthemes, purrr, scales, rlang (>= 0.4.3), RColorBrewer,
grDevices, cowplot, sf, wordcloud2, jsonlite, ggtext,
lubridate, ggparliament
argonDash, argonR, colourpicker, ggplot2, grid, hexSticker,
png, shiny, shinyWidgets
MASS, dplyr, ggplot2, rlang, tidyverse, car, purrr, stats,
graphics, formula.tools, gplots, rstatix, stringr
methods, descr, Hmisc, weights, plyr, gplots, xtable, survey,
ENmisc, car, plotrix, abind
methods, descr, Hmisc, weights, plyr, gplots, xtable, survey,
car, plotrix, abind
apexcharter, digest, dplyr, DT, htmltools, htmlwidgets, httr,
jose, jsonlite, lubridate, purrr, R6, rlang, shiny,
shinycssloaders, shinydashboard, shinydashboardPlus,
shinyFeedback, shinyjs, shinyWidgets, stringr, tibble, tidyr,
uuid, xts
digest, dplyr, DT, htmltools, httr, jose, jsonlite, lubridate,
purrr, R6, rlang, shiny, shinycssloaders, shinydashboard,
shinydashboardPlus, shinyFeedback, shinyjs, shinyWidgets,
stringr, tibble, tidyr, uuid
automagic, cli, digest, dplyr, DT, htmltools, httr, jose,
jsonlite, lubridate, purrr, R6, rlang, shiny, shinycssloaders,
shinydashboard, shinyFeedback, shinyjs, shinyWidgets, stats,
stringr, tibble, tidyr, tools, utils, uuid, yaml
automagic, digest, dplyr, DT, htmltools, httr, jose, jsonlite,
lubridate, purrr, R6, rlang, shiny, shinycssloaders,
shinydashboard, shinyFeedback, shinyjs, shinyWidgets, stats,
stringr, tibble, tidyr, tools, utils, uuid, yaml
automagic, digest, dplyr, DT, htmltools, httr, jose, jsonlite,
lubridate, purrr, R6, rlang, shiny, shinycssloaders,
shinydashboard, shinyFeedback, shinyjs, shinyWidgets, stats,
stringr, tibble, tidyr, utils, uuid, yaml
automagic, digest, dplyr, DT, htmltools, httr, jose, jsonlite,
lubridate, purrr, rlang, rmarkdown, shiny, shinycssloaders,
shinydashboard, shinyFeedback, shinyjs, shinyWidgets, stats,
stringr, tibble, tidyr, utils, uuid, yaml
automagic, digest, dplyr, DT, htmltools, httr, jose, jsonlite,
lubridate, otp, purrr, rlang, rmarkdown, shiny,
shinycssloaders, shinydashboard, shinyFeedback, shinyjs,
shinyWidgets, stats, stringr, tibble, tidyr, utils, uuid, yaml
here, httr, magrittr, memoise, ratelimitr, robotstxt, rvest,
stats, usethis
httr, magrittr, memoise, ratelimitr, robotstxt, rvest, stats,
usethis
tm, quanteda, ggplot2, parallel, spacyr, textir, glmnet, ROCR,
data.table, stringr
tm, quanteda, ggplot2, parallel, spacyr, textir, glmnet,
data.table, stringr
tm, quanteda, ggplot2, parallel, spacyr, textir, glmnet,
data.table, stringr, slam, textclean
tm, quanteda, ggplot2, parallel, spacyr, textir, glmnet,
data.table, stringr, textclean
tm, quanteda, ggplot2, parallel, spacyr, textir, glmnet,
data.table, stringr, stringi
data.table, future.apply, lava (>= 1.7.0), methods, policytree
(>= 1.2.0), SuperLearner, survival, targeted
dplyr, httr, jsonlite, purrr, readr, stringr, tibble
rcqp, methods, R6, data.table, slam, Matrix, tm, parallel,
foreach, DT
methods, R6, data.table, slam, Matrix, tm, parallel, foreach,
DT
methods, R6, data.table, slam, Matrix, tm, foreach, DT
methods, R6, data.table, slam, Matrix, tm, DT, xml2, stringi,
utils, jsonlite, parallel, pbapply, RcppCWB (>= 0.2.2), knitr
methods, R6, data.table, slam, Matrix, tm, foreach, DT, utils
methods, R6, data.table, slam, Matrix, tm, DT, utils
methods, R6, data.table, slam, Matrix, tm, DT, utils, jsonlite
methods, R6, data.table, slam, Matrix, tm, DT, utils,
jsonlite, pbapply
methods, R6, data.table, slam, Matrix, tm, DT, xml2, stringi,
utils, jsonlite, parallel, pbapply, RcppCWB (>= 0.2.2)
methods, R6, data.table (>= 1.12.2), slam, Matrix, tm, DT,
xml2, stringi, utils, jsonlite, parallel, pbapply, RcppCWB (>=
0.2.2), magrittr, knitr
methods, data.table (>= 1.12.2), slam, Matrix, tm, DT, xml2,
stringi, utils, jsonlite, parallel, pbapply, RcppCWB (>=
0.2.2), magrittr, knitr
methods, data.table (>= 1.12.2), fs, slam, Matrix, tm, DT,
xml2, stringi, utils, jsonlite, parallel, pbapply, RcppCWB (>=
0.5.2), magrittr, knitr, lifecycle
methods, data.table (>= 1.12.2), fs, slam, Matrix, tm, DT,
xml2, stringi, utils, jsonlite, parallel, pbapply, RcppCWB (>=
0.5.3), magrittr, knitr, lifecycle, rlang
grDevices, graphics, stats, spatstat, statmod
grDevices, graphics, stats, sp (>= 1.0-11)
stats, mvtnorm, Matrix, parallel, admisc (>= 0.22)
igraph, doParallel, foreach, knitr, Rglpk, Matrix, combinat,
RColorBrewer, reshape2, NMF, MDSMap
igraph, doParallel, foreach, knitr, Matrix, combinat, MDSMap
igraph, doParallel, foreach, knitr, combinat, MDSMap
doParallel, foreach, igraph, knitr, MDSMap
data.table, doParallel, foreach, itertools, lubridate,
parallel, stringr
IRanges, zoo, RUnit, parallel, R.utils, limma
abind, doParallel, foreach, Hmisc, knitr, nlme, RColorBrewer,
Rcpp (>= 0.12.19), reshape2, rmarkdown
abind, doParallel, foreach, Hmisc, knitr, nlme, RColorBrewer,
Rcpp (>= 0.12.19), reshape2
nnet,dummies, parallel, partools, RSpectra, stats, utils
nnet,dummies, parallel, partools, regtools, RSpectra, stats,
utils
methods, stats, utils, grDevices, graphics
methods, stats, utils, grDevices, graphics, Rcpp
foreach, Formula, glmnet (>= 1.9-5), iterators, Matrix, ncvreg
(>= 2.4-0), Rcpp (>= 0.11.0), stringr
dplyr, tidyr, ggplot2, assertthat, stats, rlang, magrittr,
stringr
dplyr, tidyr (>= 1.0.0), ggplot2, assertthat, stats, rlang,
magrittr, stringr
tibble, dplyr, readr, caret, gbm, stats, randomForest, pROC,
ipred
tibble, caret, gbm, stats, randomForest, pROC, ipred
stats, graphics, methods, mvtnorm, deSolve, coda
stats, graphics, mvtnorm, deSolve, coda, subplex, nloptr
stats, graphics, digest, mvtnorm, deSolve, coda, subplex,
nloptr
stats, graphics, digest, mvtnorm, deSolve, coda, reshape2,
magrittr, plyr
Rcpp, coda, geoR, parallel, methods, graphics, stats, tools
Rcpp (>= 1.0.5), methods, utils, foreach, doParallel,
parallel, DiagrammeR, ape, stats, zoo, Ryacas,
Matrix,RcppProgress, progress, nnls
cubature, dplyr, dvmisc, ggplot2, ggrepel, mvtnorm, pracma,
stats
cubature, data.table, dplyr, dvmisc, ggplot2, ggrepel,
mvtnorm, numDeriv, stats
data.table (>= 1.10.4), Epi (>= 2.0), splines, survival
Epi (>= 2.0), survival, data.table (>= 1.9.6)
Epi (>= 2.0), survival, data.table (>= 1.10.4)
doParallel, parallel, raster, methods, stats, foreach,
gdalUtils, randomForest, quantregForest, plyr
graphics, grDevices, R2jags, stats, usethis
expm, graphics, methods, MCMCpack, stats
Rcpp (>= 0.12.10), RColorBrewer, graphics
Rcpp (>= 0.12.10), RColorBrewer, graphics, grDevices
Rcpp (>= 0.12.10), RColorBrewer, graphics, grDevices, ape
DBI, igraph, lazyeval, RSQLite (>= 1.0.0)
igraph, lazyeval, dbplyr, RSQLite (>= 2.0)
adegenet, pegas, vegan, ggplot2, phangorn, ape, igraph
vegan, ggplot2, phangorn, ape, igraph, methods
vegan, ggplot2, phangorn, ape, igraph, pegas, methods
vegan, ggplot2, phangorn, ape, igraph, methods, ade4, pegas,
reshape2
vegan, ggplot2, phangorn, ape (>= 3.1-1), igraph, methods,
ade4, pegas, reshape2
stats, graphics, grDevices, utils, vegan, ggplot2, phangorn,
ape (>= 3.1-1), igraph, methods, ade4, pegas, reshape2, dplyr
(>= 0.4), boot, shiny
stats, graphics, grDevices, utils, vegan, ggplot2, phangorn,
ape (>= 3.1-1), igraph, methods, ade4, pegas, reshape2, dplyr
(>= 0.4), boot, shiny, magrittr
stats, graphics, grDevices, utils, vegan, ggplot2, phangorn,
ape (>= 3.1-1), igraph, methods, ade4, pegas, dplyr (>= 0.4),
rlang, boot, shiny, magrittr
stats, graphics, grDevices, utils, vegan, ggplot2, phangorn,
ape (>= 3.1-1), igraph (>= 1.0.0), methods, ade4, pegas, dplyr
(>= 0.4), rlang, boot, shiny, magrittr
stats, graphics, grDevices, utils, vegan, ggplot2, phangorn,
ape (>= 3.1-1), igraph (>= 1.0.0), methods, ade4, pegas,
polysat, dplyr (>= 0.4), rlang, boot, shiny, magrittr
stats, graphics, grDevices, utils, vegan, ggplot2, phangorn,
ape (>= 3.1-1), igraph (>= 1.0.0), methods, ade4, pegas,
polysat, dplyr (>= 0.4), rlang, boot, shiny, magrittr,
progressr
stats, graphics, grDevices, utils, vegan, ggplot2, ape (>=
3.1-1), igraph (>= 1.0.0), methods, ade4, pegas, polysat, dplyr
(>= 0.4), rlang, boot, shiny, magrittr, progressr
fields, graphics, ggplot2, hash, stats, grDevices
ggplot2, magrittr, lubridate, dplyr, tidyr, stats, demography,
forecast, zoo, ggpubr, moments, grid, stackoverflow, DescTools,
rcompanion, utils, corrr, Hmisc, psych, corrplot, correlation,
parallel, here, stringr, scales, rainbow, Rdpack
sf, rlang, Metrics, usethis, areal, microbenchmark
devtools, ggplot2, plyr, roxygen2, shiny, shinycssloaders
MASS, Matrix, stats, mvtnorm, Rcpp, methods
dplyr, ggplot2, tidyr, zoo, lubridate, magrittr, httr, rlang,
forecast, lunar, jsonlite
dplyr, ggplot2, tidyr, zoo, lubridate, magrittr, httr, rlang,
forecast, lunar, jsonlite, tibble
dplyr, tidyr, lubridate, magrittr, httr, rlang, forecast,
lunar, jsonlite, tibble, usethis (>= 1.5.0), crayon, clisymbols
dplyr, tidyr, lubridate, magrittr, httr, rlang, forecast,
lunar, tibble, usethis (>= 1.5.0), crayon, clisymbols, gh
clipr, clisymbols, crayon, dplyr, forecast, httr, lubridate,
lunar, magrittr, rlang, tidyr, tidyselect (>= 1.0.0), zoo
dplyr, tidyr, lubridate, magrittr, httr, rlang, forecast,
lunar, usethis (>= 1.5.0), crayon, clisymbols, gh (>= 1.1.0)
clipr, clisymbols, crayon, dplyr, forecast, gh (>= 1.1.0),
httr, lubridate, lunar, magrittr, rlang, tidyr, tidyselect (>=
1.0.0), zoo
doSNOW, evaluate, foreach, PerformanceAnalytics, quantmod,
R.utils, snow, utils, xts, zoo
digest, doSNOW, evaluate, foreach, ggplot2,
PerformanceAnalytics, quantmod, R.utils, snow, utils, xts, zoo
digest, doSNOW, evaluate, foreach, ggplot2,
PerformanceAnalytics, quantmod, R.utils, rlang, snow, utils,
xts, zoo
digest, doSNOW, evaluate, foreach, ggplot2,
PerformanceAnalytics, quantmod, R.utils, rlang, snow, utils,
xts, zoo, stats, quadprog
digest, evaluate, ggplot2, pbapply, PerformanceAnalytics,
parallel, quadprog, quantmod, R.utils, rlang, stats, utils,
xts, zoo
checkmate, data.table, dplyr, dtplyr, future.apply, methods,
ppcor, Rcpp (>= 0.12.12), rlang, rugarch, rvinecopulib, tidyr
glmnet, grf, neuralnet, progress, ggplot2, stats, parallel,
doParallel
refund, denseFLMM, dplyr, xlsx, survival, stats, tidyr, zoo,
ineq, cosinor, abind, accelerometry, minpack.lm, kableExtra,
GGIR
curl, dplyr, glue, janitor, jsonlite, lubridate, magrittr,
purrr, readr, stringr, tibble (>= 1.2), tidyr
curl, dplyr, glue, janitor, jsonlite, lubridate, magrittr,
purrr, readr, stats, stringr, tibble (>= 1.2), tidyr
abind, checkmate, rlang (>= 0.4.7), stats, tibble (>= 3.0.0),
vctrs, tensorA, pillar, distributional, parallel
abind, checkmate, rlang (>= 0.4.7), stats, tibble (>= 3.0.0),
vctrs, tensorA, pillar, distributional, parallel, matrixStats
methods, abind, checkmate, rlang (>= 0.4.7), stats, tibble (>=
3.0.0), vctrs, tensorA, pillar, distributional, parallel,
matrixStats
gtools, gdata, grid, coin, lattice, AnnotationDbi
tibble, crul, purrr, jsonlite, rvest, xml2
stringr (>= 1.3.1), matrixcalc, coda, mcmcse, abind
sf, graphics, methods, isoband, parallel, doParallel, foreach
sf, graphics, mapiso, parallel, doParallel, foreach
purrr, stringr, httr, jsonlite, readr, tibble, dplyr, js,
tidyr, memoise, naniar, ggthemes, ggplot2
purrr, stringr, httr, jsonlite, readr, tibble, dplyr, js,
tidyr, naniar, memoise
furrr, ggplot2, lavaan (>= 0.6.7), dplyr, progressr, purrr,
rlang, future
stats, nlme, GLMMadaptive, glmmTMB, parallel
checkmate, data.table, expm, ggplot2, glmnet, lme4, lmerTest,
methods, nlme, plyr, Rcpp (>= 1.0.3), signal,
data.table, jsonlite, httr, utils, AzureAuth
lme4, gdata, MASS, reshape2, stringr, plyr, ggplot2
dplyr, generics, glue, rlang, tidyselect, vctrs, purrr,
magrittr, lifecycle, tibble, tidyr, cli, methods
dplyr, glue, rlang, tidyselect, vctrs, purrr, tibble, tidyr,
cli, methods
stats, lmerTest (>= 2.0), lme4 (>= 1.1), ggplot2 (>= 2.2),
ggsci, pbmcapply (>= 1.1), Matrix, MASS, gridExtra, scales,
utils, testthat
stats, methods, parallel, lme4 (>= 1.1), Matrix, MASS, scales,
utils
R6, progress, parallel, splines2, quadprog, osqp, bootnet,
qgraph, ggplot2, patchwork
R6, progress, parallel, splines2, quadprog, osqp, bootnet,
qgraph, ggplot2, rlang, patchwork
R6, progress, parallel, splines2, quadprog, osqp, bootnet,
qgraph, ggplot2, rlang, mvtnorm, patchwork
dplyr, ggplot2, htmltools, htmlwidgets, leaflet, magrittr,
PakPC2017, rgdal, scales, shiny, tidyr, tmap
graphics, grDevices, inaparc, stats, utils
graphics, grDevices, inaparc, MASS, stats, utils
graphics, grDevices, inaparc, MASS, stats, utils, methods
curl, tfse (>= 0.5.0), jsonlite, tibble, utils
AnnotationDbi, igraph, e1071, GOSemSim, GO.db
AnnotationDbi, igraph, e1071, GOSemSim, GO.db, stats, utils
censable, dplyr, magrittr, readr, rlang (>= 0.4.11), stringr,
tibble, tidyr, zip
methods, data.table, lattice, stats, plyr
dplyr, furrr, future, ggplot2, plotly, purrr, tibble,
patchwork, tidyr
dplyr, furrr, ggplot2, plotly, purrr, tibble, patchwork, tidyr
graphics, grDevices, stats, utils, quadprog
dplyr, tidyr, ggplot2, tibble, irr, lpSolve, purrr, class
dplyr, tidyr, ggplot2, tibble, irr, lpSolve, purrr, class,
forcats, magrittr
glmnet, MatrixModels, Formula, methods, graphics, partykit,
earth, stringr
earth, Formula, glmnet, graphics, methods, partykit, rpart,
stringr
earth, Formula, glmnet, graphics, methods, partykit, rpart,
stringr, survival
earth, Formula, glmnet, graphics, methods, partykit (>=
1.2-0), rpart, stringr, survival, Matrix, MatrixModels
quanteda, gridExtra, ggplot2, vegan, grid, parallel,
topicmodels, cowplot, ecodist, proxy, reshape2
quanteda, ggplot2, vegan, grid, parallel, topicmodels,
cowplot, ecodist, proxy, reshape2
methods, dplyr, rlang, stringr, knitr, kableExtra
methods, dplyr, rlang, stringr, knitr, kableExtra,
microbenchmark, dfcrm, BOIN, parallelly
dplyr, ggplot2, magrittr, purrr, rlang, shiny,
shinycssloaders, shinythemes, tidyr
dplyr, gbm, gam, ggplot2, glmnet, graphics, MASS, MESS, mgcv,
rlang, stringr, tidyr, survival, randomForestSRC
docopt, fs, here, magrittr, purrr, R.cache, rlang, rprojroot,
rstudioapi, usethis (>= 1.6.0), withr, yaml
R.cache, cli, docopt (>= 0.7.1), fs, here, magrittr, purrr,
rlang, rprojroot, rstudioapi, tibble, withr, yaml
cli, fs, here, magrittr, purrr, R.cache, rlang, rprojroot,
rstudioapi, withr, yaml
BGLR, pls, glmnet, randomForest, xgboost, foreach, doParallel,
parallel
ggplot2(>= 3.1.0), rgl(>= 0.99.16), dplyr, ggiraphExtra,
modelr, prediction, purrr, rlang, stringr, magrittr, stats,
TH.data, reshape2, plyr, tidyr
ggplot2(>= 3.1.0), rgl(>= 0.99.16), dplyr, ggiraphExtra,
modelr, prediction, purrr, rlang, stringr, magrittr, moonBook,
stats, TH.data, reshape2, plyr, tidyr
ggplot2, lattice, parallel, pbkrtest, plyr
ggplot2, graphics, grDevices, Matrix, methods, numDeriv,
pbkrtest, plyr, stats, utils
ggplot2, graphics, grDevices, Matrix, methods, pbkrtest, plyr,
stats, utils
car, ggplot2, graphics, grDevices, HRW, lmeInfo, lmeSplines,
Matrix, MASS, methods, numDeriv, parallel, pbkrtest, plotly,
plyr, splines2, stats, utils
Rcpp, pROC, stats, graphics, RConics, ggplot2, dplyr, magrittr
caret, forecast, graphics, methods, Metrics, stats, TSPred,
tseries, utils
DMwR, randomForest, caret, caretEnsemble, methods,
clustertend, e1071, stats, utils
DMwR, randomForest, caret, clustertend, stats, e1071, methods,
utils, arules, zoo
DMwR, randomForest, caret, clustertend, stats, e1071, methods,
utils, arules, zoo, doParallel, foreach
DMwR, reshape2, ggplot2, methods, stats, caret, doParallel,
foreach
DMwR, reshape2, ggplot2, methods, stats, caret, doParallel,
foreach, e1071
caret, DMwR, randomForest, ClustOfVar, reshape2, ggplot2,
ggdendro, gridExtra, methods, utils, stats
marelac (>= 2.1.4), measurements, stats, utils
flextable, magrittr, dplyr, rlang, stringr, purrr, officer,
randomcoloR, tidyr, openxlsx, lubridate, janitor, tibble,
stringi, berryFunctions, rvg, tidyselect, formattable, badger,
framecleaner
ggplot2, kappaSize (>= 1.2), shiny, shinydashboard
shiny, shinythemes, shinyAce, miniUI, rstudioapi, tools
shiny, rstudioapi, tools, xml2, webdriver, XRJulia, httr,
utils
httr, rstudioapi, shiny, tools, utils, webdriver, xml2,
XRJulia
broom, car, dplyr, forcats, kableExtra, knitr, plotly,
stringr, tibble, tidycat, tidyr, tidyselect, vip
GenKern, fields, grid, gstat, foreign, maptools
GenKern, fields, gstat, foreign, maptools, methods
sp, rgdal (>= 0.7), ggplot2, directlabels, GenKern, fields,
gstat, foreign, maptools, methods
sp, rgdal (>= 0.7), ggplot2, directlabels, KernSmooth, fields,
gstat, foreign, maptools, methods
methods, utils, stats, graphics, grDevices, coda, rjags
data.table, futile.logger, httr, jsonlite, Metrics, graphics,
stats, utils, XML, magrittr, plotly
dplyr, gsubfn, stringr, purrr, jsonlite, stats, lubridate,
curl, stringi
dplyr, gsubfn, stringr, purrr, jsonlite, stats, lubridate,
curl, stringi, tidyr
Rcpp (>= 1.0.5), dplyr, tidyr, purrr, stringr, magrittr,
tibble, blaster, gplots
grDevices, graphics, misc3d, rgl, stats, tcltk, utils
grDevices, graphics, misc3d, rgl, scales, stats, tcltk, utils
ggplot2, grid, XML, ape, httr, lubridate, plyr, scales,
stringr, foreach
ggplot2, grid, XML, ape, httr, lubridate, plyr, scales,
stringr, foreach, reshape2
ggplot2, grid, XML, ape, httr, lubridate, plyr, scales,
stringr, foreach, reshape2, RCurl
ape, foreach, ggplot2, grid, httr, lubridate, plyr, reshape2,
scales, stringr, XML
assertthat (>= 0.2.0), Matrix, proto, magrittr, Rsymphony,
tidyr, dplyr, Rcpp, rlang
assertthat (>= 0.2.0), Matrix, proto, magrittr, tidyr, dplyr,
Rcpp, rlang
assertthat, sp, raster, slam, dplyr, gstat, rgeos, rasterVis,
methods, tidyr
utils, methods, proto, assertthat, data.table, uuid, Matrix,
rgeos, plyr, parallel, doParallel, magrittr
utils, methods, assertthat, data.table, uuid, Matrix, rgeos,
plyr, parallel, doParallel, magrittr
utils, methods, assertthat(>= 0.2.0), data.table, uuid,
Matrix, igraph, ape, rgeos, plyr, parallel, doParallel,
magrittr, tibble(>= 1.4.2)
utils, methods, assertthat(>= 0.2.0), data.table, uuid,
Matrix, igraph, ape, rgeos, plyr, parallel, doParallel,
magrittr, tibble(>= 2.0.0)
utils, methods, assertthat (>= 0.2.0), data.table, uuid,
Matrix, igraph, ape, rgeos, plyr, parallel, doParallel,
magrittr, exactextractr (>= 0.2.0), fasterize (>= 1.0.2),
tibble (>= 2.0.0)
utils, methods, assertthat (>= 0.2.0), data.table, uuid,
Matrix, igraph, ape, rgeos, plyr, parallel, doParallel,
magrittr, exactextractr (>= 0.2.0), fasterize (>= 1.0.2),
tibble (>= 2.0.0), withr (>= 2.3.0)
utils, methods, assertthat (>= 0.2.0), data.table, uuid,
Matrix, slam (>= 0.1-48), igraph, ape, rgeos, plyr, parallel,
doParallel, magrittr, exactextractr (>= 0.2.0), fasterize (>=
1.0.2), tibble (>= 2.0.0), withr (>= 2.3.0)
utils, methods, assertthat (>= 0.2.0), data.table, uuid,
Matrix, slam (>= 0.1-48), igraph, ape, rgeos, plyr, parallel,
doParallel, magrittr, fasterize (>= 1.0.2), exactextractr (>=
0.2.0), tibble (>= 2.0.0), withr (>= 2.3.0)
ggplot2, lubridate, raster, httr, dplyr, stringr, magrittr,
purrr, readr, utils
dplyr, generics, rlang, tidyselect, vctrs, yardstick
dplyr, generics, rlang (>= 0.4.0), tidyselect, vctrs (>=
0.2.0), yardstick
dplyr, generics, rlang (>= 0.4.0), tidyselect, vctrs (>=
0.3.0), yardstick
lavaan(>= 0.6.3), diagram, magrittr, dplyr, flextable,
ggiraphExtra, ggplot2, jtools, mycor, officer, psych, purrr,
rrtable, semTools, stringr, tidyselect, shiny, modelr,
prediction, rlang, tidyr, TH.data, shinyWidgets
lavaan, diagram, dplyr, flextable, ggplot2(>= 3.1.1), ggrepel,
officer, psych, purrr, rrtable, semTools, stringr, tidyselect,
rlang, tidyr, predict3d(>= 0.1.3.3), interactions, ztable,
rmarkdown
lavaan, diagram, dplyr, flextable(>= 0.5.8), ggplot2(>=
3.1.1), ggrepel, officer, psych, purrr, rrtable, semTools,
stringr, tidyselect, rlang, tidyr, predict3d(>= 0.1.3.3),
interactions, ztable, rmarkdown
bupaR, processmapR, rlang, magrittr, dplyr, shiny, tidyr,
htmlwidgets, DiagrammeR, DiagrammeRsvg, RColorBrewer, zoo,
scales, shinycssloaders
bupaR, processmapR (>= 0.3.1), rlang, magrittr, dplyr,
htmlwidgets, DiagrammeR (>= 1.0.0), RColorBrewer, zoo, scales
bupaR, processmapR (>= 0.3.1), rlang, magrittr, dplyr,
htmlwidgets, DiagrammeR (>= 1.0.0), zoo, scales
bupaR, processmapR (>= 0.3.1), rlang, magrittr, dplyr, tidyr,
htmlwidgets, DiagrammeR (>= 1.0.0), zoo, grDevices
bupaR, processmapR (>= 0.3.1), rlang, magrittr, dplyr, tidyr,
htmlwidgets, DiagrammeR (>= 1.0.0), grDevices
bupaR, processmapR (>= 0.3.1), rlang, magrittr, dplyr, tidyr,
htmlwidgets, DiagrammeR (>= 1.0.0), grDevices, stringr
bupaR, processmapR (>= 0.3.1), rlang, magrittr, dplyr, tidyr,
htmlwidgets, DiagrammeR (>= 1.0.0), grDevices, stringr,
htmltools
dplyr, bupaR, rlang, edeaR, stringr, glue
dplyr, bupaR (>= 0.5.1), rlang, edeaR (>= 0.9.0), stringr,
stringi, glue, lifecycle, tidyr
dplyr,bupaR, edeaR, DiagrammeR, ggplot2, ggthemes
dplyr,bupaR, edeaR, DiagrammeR, ggplot2, ggthemes, stringr,
purrr, data.table, shiny, miniUI, glue
dplyr,bupaR, edeaR, DiagrammeR, ggplot2, ggthemes, stringr,
purrr, data.table, shiny, miniUI, glue, forcats, hms,
RColorBrewer, plotly, rlang, scales
dplyr, bupaR (>= 0.4.0), edeaR (>= 0.8.0), DiagrammeR (>=
1.0.0), ggplot2, ggthemes, stringr, purrr, data.table, shiny,
miniUI, glue, forcats, hms, RColorBrewer, plotly, rlang, scales
dplyr, bupaR (>= 0.4.0), edeaR (>= 0.8.0), DiagrammeR (>=
1.0.0), ggplot2, ggthemes, stringr, purrr, data.table, shiny,
miniUI, glue, forcats, hms, RColorBrewer, plotly, rlang,
scales, viridis
dplyr, bupaR (>= 0.4.0), edeaR (>= 0.8.0), DiagrammeR (>=
1.0.0), ggplot2, ggthemes, stringr, purrr, data.table, shiny,
miniUI, glue, forcats, hms, RColorBrewer, plotly, rlang,
scales, tidyr
dplyr, bupaR (>= 0.4.0), edeaR (>= 0.8.0), DiagrammeR (>=
1.0.0), ggplot2, ggthemes, stringr, purrr, data.table, shiny,
miniUI, glue, forcats, hms, RColorBrewer, plotly, rlang,
scales, tidyr, htmltools, Rcpp
dplyr, bupaR (>= 0.4.0), edeaR (>= 0.8.0), DiagrammeR (>=
1.0.0), ggplot2, stringr, purrr, data.table, shiny, miniUI,
glue, forcats, hms, plotly, rlang, scales, tidyr, htmltools,
Rcpp, lifecycle
dplyr, bupaR (>= 0.5.1), edeaR (>= 0.9.0), DiagrammeR (>=
1.0.0), ggplot2, stringr, purrr, data.table, shiny, miniUI,
glue, forcats, hms, plotly, rlang (>= 1.0.0), cli (>= 3.2.0),
scales, tidyr, htmltools, Rcpp, lifecycle
magrittr, ggplot2, dplyr, bupaR, edeaR, shiny, miniUI
fs, rmarkdown, rprojroot, withr, rlang, cli, whisker
Rcpp (>= 0.11.5), stats, graphics, survival, KernSmooth, lava
Rcpp (>= 0.11.5), stats, grDevices, graphics, survival,
KernSmooth, lava
doParallel, foreach, parallel, Rglpk, utils
doParallel, foreach, methods, plm, Rglpk
lpSolveAPI, doParallel, foreach, iterators, methods
microbenchmark, quantreg, lhs, splines, methods, RColorBrewer,
utils, MASS, rcdd
cli, processx, profile, RProtoBuf, utils, withr
methods, rlang, tibble (>= 3.0.0), vctrs, withr
stats, utils, incidence, distcrete, ggplot2
stats, utils, incidence (>= 1.4.1), distcrete, ggplot2
stats, utils, incidence (>= 1.4.1), ggplot2, methods
methods, RcppAnnoy (>= 0.0.10), Rtsne, RColorBrewer, dbscan,
plotly, assertthat, shiny, shinythemes, shinyjs
rstan, rstanarm (>= 2.17.2), loo, ggplot2, Rcpp, utils
rstan, rstanarm (>= 2.17.4), loo (>= 2.0.0), ggplot2, Rcpp,
utils, rngtools (>= 1.2.4)
loo (>= 2.0.0), ggplot2, Rcpp, utils, rngtools (>= 1.2.4)
methods, dplyr, loo (>= 2.0.0), rstantools (>= 2.0.0), lme4,
optimx, ggplot2, Rcpp, utils, rngtools (>= 1.2.4), tidyverse,
MASS, magrittr, mgcv, gamm4
methods, dplyr, loo (>= 2.0.0), rstantools (>= 2.0.0), lme4,
mvtnorm, ggplot2, Rcpp, utils, magrittr, mgcv, gamm4, rlang
methods, dplyr, loo (>= 2.0.0), rstantools (>= 2.0.0), lme4,
mvtnorm, ggplot2, Rcpp, utils, magrittr, mgcv, gamm4, MASS,
rlang
reshape2, ggplot2, ggrepel, gridExtra, limma, statmod,
pcaMethods, VIM, missForest, caret, kernlab, xgboost, viridis,
pROC
dplyr (>= 0.5.0), extraDistr, ggplot2, grid, rstan (>=
2.14.0), scales, stats, tidyr (>= 0.6.1), utils, zoo
dplyr (>= 0.5.0), extraDistr, ggplot2, grid, rstan, scales,
stats, tidyr, utils, zoo
dplyr (>= 0.5.0), extraDistr, ggplot2, grid, rstan (>=
2.14.0), scales, stats, tidyr (>= 0.6.1)
dplyr (>= 0.5.0), dygraphs (>= 1.1.1.4), extraDistr, ggplot2,
grid, rstan (>= 2.14.0), scales, stats, tidyr (>= 0.6.1), xts
dplyr (>= 0.5.0), dygraphs (>= 1.1.1.4), extraDistr, ggplot2,
grid, rstan (>= 2.14.0), scales, stats, tidyr (>= 0.6.1),
utils, xts
dplyr (>= 0.7.7), dygraphs (>= 1.1.1.4), extraDistr, ggplot2,
grid, rstan (>= 2.14.0), scales, stats, tidyr (>= 0.6.1), xts
dplyr (>= 0.7.7), dygraphs (>= 1.1.1.4), extraDistr, ggplot2,
grid, methods, rstan (>= 2.18.1), rstantools (>= 2.0.0),
scales, stats, tidyr (>= 0.6.1), xts
dplyr (>= 0.7.7), dygraphs (>= 1.1.1.4), extraDistr, ggplot2,
grid, lubridate, methods, RcppParallel (>= 5.0.1), rstan (>=
2.18.1), rstantools (>= 2.0.0), scales, StanHeaders, stats,
tidyr (>= 0.6.1), xts
fastcluster, ggplot2, methods, Rcpp, stats, utils
fastcluster, ggplot2, igraph, methods, Rcpp, stats, utils
fastcluster, ggplot2, igraph, Rcpp, stats, utils
fastcluster, ggplot2, grDevices, igraph, Rcpp, stats, utils
foreach, iterators, Rcpp (>= 1.0.1), mathjaxr (>= 1.0),
lifecycle (>= 0.2.0)
pryr, lattice, methods, magick, dplyr, grid, gridExtra,
ggplot2, rjson, rlang, shiny
DT, dynamicTreeCut, methods, protoclust, rare, shiny,
shinycssloaders, shinythemes, tools
rlang, dplyr, stringr, magrittr, data.table, janitor,
progress, purrr, tidyr, ggplot2, forcats, tibble, plotly,
ggrepel, methods, utils, grDevices
rlang, dplyr, stringr, magrittr, data.table, janitor,
progress, purrr, tidyr, ggplot2, forcats, tibble, plotly,
ggrepel, utils, grDevices, curl
rlang, dplyr, stringr, magrittr, data.table, janitor,
progress, purrr, tidyr, ggplot2, forcats, tibble, plotly,
ggrepel, utils, grDevices, curl, readr, lifecycle
rlang, dplyr, stringr, magrittr, data.table, janitor,
progress, purrr, tidyr, ggplot2, forcats, tibble, plotly,
ggrepel, utils, grDevices, curl, readr, lifecycle, httr
rlang, dplyr, stringr, magrittr, data.table, janitor,
progress, purrr, tidyr, ggplot2, forcats, tibble, plotly,
ggrepel, utils, grDevices, curl, readr, lifecycle, httr,
methods
rlang, dplyr, stringr, magrittr, data.table, janitor,
progress, purrr, tidyr, ggplot2, forcats, tibble, plotly,
ggrepel, utils, grDevices, curl, readr, lifecycle, httr,
methods, R.utils, stats
tidytext, dplyr, magrittr, stringr, rlang, purrr, tidyr,
tokenizers, SnowballC, assertthat
dplyr, magrittr, stringr, rlang, purrr, tidyr, tokenizers,
SnowballC, assertthat
stringr, rlang, tidyr, tokenizers, SnowballC, attempt
httr, jsonlite, provGraphR, provParseR, textutils,
dplyr, provParseR (>= 0.1.2), diffobj, digest, stringr
igraph, Matrix, methods, provParseR (>= 0.2)
cli, crayon, httr, lubridate, magrittr, purrr
Matrix (>= 1.2), Rcpp (>= 0.12.12), RcppParallel
AhoCorasickTrie, Matrix, doParallel, foreach, plyr, readr,
seqinr, stringr, dplyr
AhoCorasickTrie, Matrix, doParallel, foreach, plyr, seqinr,
stringr
AhoCorasickTrie, docopt, Matrix, methods, purrr, readr, rlang,
seqinr, stringr, dplyr
config, liteq, data.table, crayon, DBI, RSQLite
assertthat, fst, data.table, utils, vctrs, tibble, cli,
pillar, crayon, fansi, backports, rlang, knitr
assertthat, fst, data.table, utils, vctrs, tibble, cli,
pillar, crayon, fansi, backports, rlang,
stringr, codetools, methods, Rcpp (>= 0.11.0)
stringr, codetools, methods, Rcpp (>= 0.11.0), lobstr
countrycode, DataCombine, reshape2, rio, xlsx
dplyr, tidyr, data.table, rjags, mvtnorm, matrixcalc, ggplot2,
foreach, doParallel, parallel, MatchIt, survival,
futile.logger, methods, utils
dplyr, data.table, rjags, mvtnorm, ggplot2 (>= 3.2.0),
foreach, doParallel, parallel, MatchIt, survival,
futile.logger, methods
MASS, datasets, grDevices, graphics, stats, utils
stats, ggplot2, reshape2, lavaan, JWileymisc (>= 1.3.0)
Rcpp (>= 0.11.5), RColorBrewer, signal, zoo
gstat, automap, sp, doParallel, rgdal, foreach, parallel, Rcpp
grid, gridBase, randomForest, rpart, partykit, party,
BayesTree
Rdpack, grid, gridBase, randomForest, rpart, partykit, party,
BayesTree
data.table, RCurl, foreign, SAScii, httr, XML, openxlsx
data.table, RCurl, foreign, SAScii, openxlsx, futile.logger
bupaR (>= 0.5.1), dplyr, data.table, forcats, ggplot2, tidyr,
rlang (>= 1.0.0), cli (>= 3.2.0), glue, stringi
stats, utils, mgcv, dplyr, magrittr, assertthat, plyr,
reshape2, plotrix, rlang
stats, MASS, metap, car, nortest, lawstat, normwhn.test,
DAMisc, ggplot2, boot, grid, cowplot, fANCOVA, dplyr, tidyr,
utils, magrittr, tibble, sm, multcomp, rlang, ggrepel, mgcv
stats, MASS, metap, car, nortest, lawstat, DAMisc, ggplot2,
boot, grid, cowplot, fANCOVA, dplyr, tidyr, utils, magrittr,
tibble, sm, multcomp, rlang, ggrepel, mgcv
graphics, stats, osDesign, np, chngpt, MASS
dplyr, ggplot2, glue, lavaan, lifecycle, lme4, lmerTest,
parameters, performance, psych, rlang (>= 0.1.2), stringr,
tibble, tidyr, utils
dplyr, ggplot2, insight, glue, lavaan, lifecycle, lme4,
lmerTest, parameters, performance, psych, rlang (>= 0.1.2),
stringr, tibble, tidyr, utils
dplyr, ggplot2, glue, insight, lavaan, lifecycle, lme4,
lmerTest, parameters, patchwork, performance, psych, rlang (>=
0.1.2), stringr, tibble, tidyr, utils
vars, igraph, imputeTS, Hmisc, SparseTSCGM, mlVAR, qgraph,
graphicalVAR, sparsevar, bigtime, mgm, crayon, longitudinal,
networktools, gtools, car, stats, Matrix, methods, MASS,
ordinalNet, glmnet, fastDummies
vars, igraph, imputeTS, Hmisc, SparseTSCGM, mlVAR, qgraph,
graphicalVAR, bigtime,mgm, crayon, longitudinal, networktools,
gtools, car, stats, Matrix, methods, MASS, ordinalNet, glmnet,
fastDummies, ncvreg, parallel, doParallel, reshape2, picasso,
corpcor
vars, igraph, imputeTS, Hmisc, SparseTSCGM, mlVAR, qgraph,
graphicalVAR, bigtime, mgm, crayon, longitudinal, networktools,
gtools, car, stats, Matrix, methods, MASS, ordinalNet, glmnet,
fastDummies, ncvreg, parallel, doParallel, ggplot2, reshape2,
grid, mvtnorm, picasso, corpcor
cli, crayon, dplyr, ez, reshape2, testthat, xtable
cli, crayon, dplyr, ez, testthat, xtable
MASS, boot, tmvtnorm, tibble, reshape2, ggplot2, dplyr, stats,
metafor
MASS, boot, tmvtnorm, tibble, reshape2, ggplot2, dplyr, stats,
metafor, nor1mix
MASS, boot, tmvtnorm, tibble, reshape2, ggplot2, dplyr, stats,
metafor, nor1mix, methods
MASS, boot, tmvtnorm, tibble, reshape2, ggplot2, dplyr, stats,
metafor, nor1mix, methods, progress
MASS, boot, tmvtnorm, tibble, reshape2, ggplot2, dplyr, stats,
metafor, nor1mix, methods, progress, tidyr, rtf
MASS, boot, tmvtnorm, tibble, reshape2, ggplot2, dplyr, stats,
metafor, nor1mix, methods, progress, tidyr, rtf, fungible
stats, methods, MASS, boot, tmvtnorm, tibble, reshape2,
ggplot2, dplyr, metafor, nor1mix, progress, tidyr, rtf,
fungible
stats, methods, knitr, MASS, boot, tmvtnorm, tibble, reshape2,
ggplot2, dplyr, metafor, nor1mix, progress, tidyr, rtf,
fungible, stringr , rmarkdown, RefManageR, rlang, RCurl
stats, methods, MASS, boot, tmvtnorm, tibble, reshape2,
ggplot2, dplyr, metafor, nor1mix, progress, tidyr, rtf,
fungible, stringr , rmarkdown, RefManageR, rlang, RCurl, xml2
dplyr, stats, methods, MASS, boot, tmvtnorm, tibble, reshape2,
ggplot2, metafor, nor1mix, progress, tidyr, stringi, fungible,
stringr, rlang, RCurl, xml2, purrr, data.table, RefManageR,
rmarkdown, knitr, cli, crayon
dplyr, stats, methods, MASS, boot, tmvtnorm, tibble, reshape2,
ggplot2, metafor, nor1mix, progress, tidyr, stringi, stringr,
rlang, RCurl, xml2, purrr, data.table, RefManageR, rmarkdown,
knitr, cli, crayon
dplyr, stats, boot, tibble, reshape2, ggplot2, metafor,
progress, tidyr (>= 1.0.0), stringi, stringr, rlang, curl,
purrr, data.table
dplyr, stats, methods, MASS, boot, tmvtnorm, tibble, reshape2,
ggplot2, metafor, nor1mix, progress, tidyr, stringi, stringr,
rlang, RCurl, xml2, purrr, data.table, cli, crayon
dplyr, stats, methods, MASS, boot, tmvtnorm, tibble, reshape2,
ggplot2, metafor, nor1mix, progress, tidyr (>= 1.0.0), stringi,
stringr, rlang, curl, purrr, data.table, cli, crayon
dplyr, stats, methods, MASS, boot, tmvtnorm, tibble, reshape2,
ggplot2, metafor, nor1mix, progress, tidyr (>= 1.0.0), stringi,
stringr, rlang, curl, purrr, data.table
stats, boot, metafor, ggplot2, progress, curl, mathjaxr,
dplyr, tibble, tidyr (>= 1.0.0), rlang, purrr
stats, boot, metafor, ggplot2, progress, curl, dplyr, tibble,
tidyr (>= 1.0.0), rlang, purrr
ggplot2, dplyr, tidyr, purrr, tidyverse, rtf, psych, ppcor,
corrplot, rstanarm
ggplot2, dplyr, tidyr, purrr, tidyverse, rtf, psych, ppcor,
corrplot, rstanarm, MuMIn, lmerTest
ggplot2, dplyr, tidyr, purrr, psych, MASS, nFactors, qgraph,
ppcor, ggcorrplot, rstanarm, MuMIn, lmerTest
methods, ggplot2, dplyr, tidyr, stringr, purrr, psych, MASS,
nFactors, qgraph, ppcor, ggcorrplot, rstanarm, MuMIn, lmerTest
methods, dplyr, ggplot2, tidyr, stringr, purrr, psych, MASS,
nFactors, qgraph, ppcor, ggcorrplot, rstanarm, MuMIn, lmerTest,
coda, emmeans, broom, tibble, DescTools, pbkrtest, BayesFactor
methods, dplyr, ggplot2, tidyr, stringr, purrr, psych, MASS,
nFactors, qgraph, ppcor, ggcorrplot, rstanarm, MuMIn, lmerTest,
coda, emmeans, broom, tibble, DescTools, pbkrtest, BayesFactor,
scales
methods, dplyr, ggplot2, tidyr, stringr, purrr, psych, MASS,
nFactors, qgraph, ppcor, ggcorrplot, rstanarm, rstantools,
MuMIn, lmerTest, coda, emmeans, broom, tibble, DescTools,
pbkrtest, BayesFactor (>= 0.9.1), scales, loo (>= 2.0.0),
lavaan
methods, dplyr, ggplot2, tidyr, stringr, purrr, psych, MASS,
nFactors, qgraph, ppcor, ggcorrplot, rstanarm, rstantools,
MuMIn, lme4, lmerTest, coda, emmeans (>= 1.2.2), broom, tibble,
DescTools, pbkrtest, BayesFactor (>= 0.9.1), scales, loo (>=
2.0.0), lavaan
methods, dplyr, ggplot2, tidyr, stringr, purrr, psych, MASS,
nFactors, qgraph, ppcor, ggcorrplot, rstanarm, rstantools,
MuMIn, lme4, lmerTest, coda, emmeans (>= 1.2.2), broom, tibble,
DescTools, BayesFactor (>= 0.9.1), scales, loo (>= 2.0.0),
lavaan
methods, dplyr, ggplot2, tidyr, stringr, purrr, psych, MASS,
qgraph, nFactors, ppcor, ggcorrplot, rstanarm, rstantools,
MuMIn, lme4, lmerTest, emmeans (>= 1.2.2), broom, tibble,
DescTools, BayesFactor (>= 0.9.1), scales, loo (>= 2.0.0),
lavaan, blavaan (>= 0.3.4)
methods, stats, scales, utils, dplyr, tidyr, stringr, ggplot2,
insight, bayestestR, parameters, performance, effectsize
stats, scales, utils, dplyr, stringr, ggplot2, insight,
bayestestR, parameters, effectsize
graphics, methods, stats, lattice, Formula (>= 1.1-0),
modeltools
methods, qgraph, numDeriv, dplyr, abind, Matrix, lavaan,
corpcor, glasso, mgcv, optimx, VCA, pbapply, parallel,
magrittr, IsingSampler, tidyr, psych, GA, combinat, rlang
crayon, methods, qgraph, numDeriv, dplyr, abind, matrixcalc,
Matrix, lavaan, corpcor, ucminf, glasso, mgcv, optimx, mvtnorm,
VCA, pbapply, parallel, magrittr
crayon, methods, qgraph, numDeriv, dplyr, abind, matrixcalc,
Matrix, lavaan, corpcor, ucminf, glasso, mgcv, optimx, mvtnorm,
VCA, pbapply, parallel, magrittr, pbv
crayon, methods, qgraph, numDeriv, dplyr, abind, matrixcalc,
Matrix, lavaan, corpcor, ucminf, glasso, mgcv, optimx, mvtnorm,
VCA, pbapply, parallel, magrittr, pbv, IsingSampler
methods, qgraph, numDeriv, dplyr, abind, matrixcalc, Matrix,
lavaan, corpcor, ucminf, glasso, mgcv, optimx, mvtnorm, VCA,
pbapply, parallel, magrittr, pbv, IsingSampler, ggplot2, tidyr
methods, qgraph, numDeriv, dplyr, abind, matrixcalc, Matrix,
lavaan, corpcor, ucminf, glasso, mgcv, optimx, mvtnorm, VCA,
pbapply, parallel, magrittr, IsingSampler, ggplot2, tidyr,
psych, GA, combinat
methods, qgraph, numDeriv, dplyr, abind, matrixcalc, Matrix,
lavaan, corpcor, ucminf, glasso, mgcv, optimx, mvtnorm, VCA,
pbapply, parallel, magrittr, pbv, IsingSampler, ggplot2, tidyr,
psych, GA, combinat
methods, qgraph, numDeriv, dplyr, abind, Matrix, lavaan,
corpcor, glasso, mgcv, optimx, VCA, pbapply, parallel,
magrittr, IsingSampler, tidyr, psych, GA, combinat
graphics, stats, modeltools (>= 0.2-21), sandwich, strucchange
graphics, grDevices, grid, stats, Formula
ggmap, rgdal, plyr, geosphere, ggplot2, sp, lubridate,
RgoogleMaps, SDMTools, stats
ggmap, rgdal, plyr, geosphere, ggplot2, sp, lubridate,
RgoogleMaps, Hmisc, stats
rgdal, plyr, geosphere, ggplot2, sp, lubridate, RgoogleMaps,
Hmisc, stats
psych, plyr, rtf, R2HTML, mokken, lavaan
TDA, doParallel, foreach, plotly, viridis
bio3d (>= 2.3-4), Biostrings, graphics, httr (>= 1.3.1),
igraph, jsonlite, muscle, RCurl, seqinr, stats, utils, xml2,
XML
bio3d (>= 2.3-4), Biostrings, curl, graphics, httr (>= 1.3.1),
igraph, jsonlite, muscle, RCurl, seqinr, stats, utils, xml2
GLMMadaptive, lme4, matrixcalc, moments, mvtnorm, numDeriv,
tweeDEseq
GLMMadaptive, lme4, matrixcalc, moments, mvtnorm, numDeriv,
tweeDEseq, aod
GLMMadaptive, lme4, matrixcalc, moments, mvtnorm, numDeriv,
tweeDEseq, aod, graphics
aod, GLMMadaptive, graphics, lme4, matrixcalc, moments,
mvtnorm, numDeriv, tweeDEseq
aod, GLMMadaptive, graphics, lme4, matrixcalc, moments,
mvtnorm, numDeriv, tweeDEseq, rstudioapi
graphics, GLMMadaptive, lme4, matrixcalc, moments, mvtnorm,
numDeriv, tweeDEseq
partitions, sp, raster, igraph, RANN, spatstat.geom, rgeos,
maptools, stats, methods
partitions, sp, raster, igraph, RANN, spatstat.geom,
spatstat.utils, rgeos, stats, methods
dplyr, hunspell, magrittr, rslp, SnowballC, stringr, tidyr
dplyr, hunspell, magrittr, rslp, SnowballC, stringr, tidyr,
tokenizers
dplyr, hunspell, magrittr, rslp, SnowballC, stringr, tidyr,
tokenizers, tibble
httr, glue, digest, jsonlite, purrr, tibble, assertthat
coda, plyr, reshape2, foreach, doMC, doRNG
car, Epi, epiR, epitools, gee, lmtest, lme4, MASS, multcomp,
nlme, nnet, ordinal, sandwich, survival
car, bookdown, descr, Epi, epiR, epitools, gee, lmtest, lme4,
MASS, multcomp, nlme, nnet, ordinal, pander, papeR, rmdformats,
sandwich, survival, visreg
car, bookdown, descr, effects, Epi, epiR, epitools, gee,
lmtest, lme4, MASS, multcomp, nlme, nnet, ordinal, pander,
papeR, rmdformats, sandwich, survival
car, bookdown, effects, Epi, epiR, epitools, kableExtra,
knitr, lmtest, lme4, MASS, multcomp, nlme, nnet, ordinal,
papeR, rmdformats, sandwich, survival
car, bookdown, desctable, effects, Epi, epiR, epitools, knitr,
latex2exp, lmtest, lme4, MASS, multcomp, nlme, nnet, ordinal,
pander, papeR, sandwich, survival
car, dplyr, Epi, epiR, epitools, finalfit, ggplot2, Hmisc,
huxtable, lmtest, sandwich, sjlabelled, sjmisc, sjPlot,
survival, tibble, tidyselect
car, dplyr, Epi, epiR, epitools, finalfit, ggplot2, Hmisc,
lmtest, sandwich, sjlabelled, sjmisc, sjPlot, survival, tibble,
tidyselect
car, dplyr, Epi, epiR, epitools, ggplot2, Hmisc, huxtable,
lmtest, moonBook, sandwich, sjlabelled, sjmisc, sjPlot,
survival, tibble, tidyselect
broom, car, bookdown, dplyr, Epi, epiR, epitools, GGally,
ggeffects, ggplot2, Hmisc, kableExtra, knitr, latex2exp,
lmtest, lme4, MASS, moonBook, mosaic, nlme, nnet, ordinal,
reshape2, sandwich, sjlabelled, sjPlot, survival
car, dplyr, Epi, epiR, epitools, ggplot2, Hmisc, lmtest,
sandwich, sjlabelled, sjPlot, survival
car, dplyr, Epi, epiR, epitools, finalfit, ggplot2, Hmisc,
lmtest, sandwich, sjlabelled, sjPlot, survival
car, dplyr, Epi, epiR, epitools, ggplot2, Hmisc, lmtest,
moonBook, sandwich, sjlabelled, sjmisc, sjPlot, survival,
tibble, tidyselect
rstan (>= 2.18.1), rstantools (>= 1.5.1), loo, truncnorm
RCurl, XML, SSOAP, NCBI2R, DAVIDQuery, boot, R2HTML
DBI, R.utils, RSQLite, assertthat, dplyr, readr
methods, parallel, graphics, stats, utils, Matrix
methods, parallel, graphics, stats, utils, tools, Matrix
AnnotationDbi, SummarizedExperiment, Rsamtools, Biobase,
S4Vectors, methods, parallel, GenomicFeatures, ggplot2, grid,
GenomicAlignments
Rcpp (>= 0.12.15), ADGofTest (>= 0.3), stats, metafor
ggplot2, plyr, rappdirs, stringr, tibble
lme4 (>= 1.1-8), rpart, randomForest, methods
magrittr (>= 1.5), dplyr (>= 0.4.3), Rcpp, lazyeval
magrittr (>= 1.5), Rcpp, lazyeval (>= 0.2.0), tibble
magrittr (>= 1.5), tibble, rlang (>= 0.1)
magrittr (>= 1.5), rlang (>= 0.1), tibble
magrittr (>= 1.5), dplyr (>= 0.4.3), purrr, Rcpp, lazyeval (>=
0.2.0)
magrittr (>= 1.5), dplyr (>= 0.4.3), purrr, Rcpp
R6, assertthat, glue, hms, methods, pkgcond, purrr, testextra,
utils, rlang
utils, lubridate, stats, readxl, reshape, reshape2, sqldf,
kableExtra, plyr, dplyr, tidyverse, readr
stats, methods, utils, grDevices, magrittr (>= 2.0.0),
progress, data.table, bit64, glue, RColorBrewer, ggplot2
stats, methods, utils, magrittr (>= 2.0.0), progress,
data.table, bit64, glue, RColorBrewer, ggplot2, ggfittext
data.table, plyr, stringr, RJSONIO, httr
data.table, plyr, stringr, RJSONIO, httr (>= 1.1)
Rcpp (>= 0.12.10) , robustbase , zipfR , stats
Rcpp (>= 0.12.10), stats, robustbase, zipfR
oro.nifti (>= 0.9), stringr, aws (>= 2.4), adimpro (>= 0.9)
broom, data.table, dplyr, ggplot2, ggpmisc, ggthemes,
magrittr, multcomp, readxl, reshape2, rstatix, sjmisc, stringr,
tibble, tidyr, xlsx
broom, data.table, dplyr, ggplot2, ggpmisc, ggthemes,
kableExtra, magrittr, multcomp, readxl, reshape2, rstatix,
sjmisc, stringr, tibble, tidyr, xlsx
ggplot2, dplyr, tidyr, ggcorrplot, multcompView, PMCMRplus,
crayon, purrr, haven, rlang, ggExtra, patchwork
foreach, doParallel, copula, plyr, parallel
data.table, foreach, doParallel, copula, plyr, parallel,
viridis
data.table, foreach, doParallel, copula, parallel, viridis,
ggExtra, dplyr
ggplot2, data.table, copula, viridis, ggExtra, dplyr, cowplot,
Rcpp (>= 1.0.6)
lme4, Matrix, mvtnorm, plyr, dplyr, matrixcalc, future.apply
ncdf4, gplots, XML, gdata, moments, boot, fields
Rcpp, stats, grDevices, graphics, mcmcse, stableGR, RcppDist,
knitr, rmarkdown
gridExtra, chron, RColorBrewer, igraph, tm, wordcloud,
venneuler, openNLPmodels.en, Snowball, gplots, gridExtra,
gdata, openNLP, XML, RCurl, reshape2, parallel
gridExtra, chron, grDevices, RColorBrewer, igraph, tm,
wordcloud, venneuler, openNLPmodels.en, Snowball, gplots,
gridExtra, openNLP, plotrix, XML, RCurl, reshape2, parallel,
tools
gridExtra, chron, grDevices, RColorBrewer, igraph, tm,
wordcloud, venneuler, openNLPmodels.en, Snowball, SnowballC,
gplots, openNLP, plotrix, XML, RCurl, reshape2,
parallel, tools
chron, gdata, grid, gridExtra, igraph, RCurl, openNLP (>=
0.2-1), NLP, parallel, plotrix, reports, reshape2, scales, tm,
tools, venneuler, wordcloud, XML
chron, gdata, grid, gridExtra, igraph, RCurl, openNLP (>=
0.2-1), NLP, parallel, plotrix, reports (>= 0.1.2), reshape2,
scales, tm, tools, venneuler, wordcloud, xlsx, XML
chron, gdata, grid, gridExtra, igraph, RCurl, openNLP (>=
0.2-1), NLP, parallel, plotrix, reports, reshape2, scales, tm,
tools, venneuler, wordcloud, xlsx, XML
chron, dplyr, gdata, grid, gridExtra, igraph, RCurl, openNLP
(>= 0.2-1), NLP, parallel, plotrix, reports, reshape2, scales,
tm, tools, venneuler, wordcloud, xlsx, XML
chron, dplyr, gdata, grid, gridExtra, igraph, RCurl, openNLP
(>= 0.2-1), NLP, parallel, plotrix, reports, reshape2, scales,
tm (>= 0.6), tools, venneuler, wordcloud, xlsx, XML
chron, dplyr, gdata, grid, gridExtra, igraph, NLP, openNLP (>=
0.2-1), parallel, plotrix, RCurl, reports, reshape2, scales,
stringdist, tm (>= 0.6), tools, venneuler, wordcloud, xlsx, XML
chron, dplyr (>= 0.3), gdata, gender (>= 0.4.1), grid,
gridExtra, igraph, NLP, openNLP (>= 0.2-1), parallel, plotrix,
RCurl, reports, reshape2, scales, stringdist, tm (>= 0.6),
tools, venneuler, wordcloud, xlsx, XML
chron, dplyr (>= 0.3), gdata, gender (>= 0.4.1), ggplot2 (>=
0.9.3.1), grid, gridExtra, igraph, NLP, openNLP (>= 0.2-1),
parallel, plotrix, RCurl, reports, reshape2, scales,
stringdist, tidyr, tm (>= 0.6), tools, venneuler, wordcloud,
xlsx, XML
chron, dplyr (>= 0.3), gdata, gender (>= 0.4.3), ggplot2 (>=
0.9.3.1), grid, gridExtra, igraph, methods, NLP, openNLP (>=
0.2-1), parallel, plotrix, RCurl, reports, reshape2, scales,
stringdist, tidyr, tm (>= 0.6.2), tools, venneuler, wordcloud,
xlsx, XML
chron, dplyr (>= 0.3), gdata, gender (>= 0.5.1), ggplot2 (>=
0.9.3.1), grid, gridExtra, igraph, methods, NLP, openNLP (>=
0.2-1), parallel, plotrix, RCurl, reports, reshape2, scales,
stringdist, tidyr, tm (>= 0.6.2), tools, venneuler, wordcloud,
xlsx, XML
chron, dplyr (>= 0.3), gdata, gender (>= 0.5.1), ggplot2 (>=
2.1.0), grid, gridExtra, igraph, methods, NLP, openNLP (>=
0.2-1), parallel, plotrix, RCurl, reports, reshape2, scales,
stringdist, tidyr, tm (>= 0.6.2), tools, venneuler, wordcloud,
xlsx, XML
chron, dplyr (>= 0.3), gdata, gender (>= 0.5.1), ggplot2 (>=
2.1.0), grid, gridExtra, igraph, methods, NLP, openNLP (>=
0.2-1), parallel, plotrix, RCurl, reports, reshape2, scales,
stringdist, tidyr, tm (>= 0.7.2), tools, venneuler, wordcloud,
xlsx, XML
chron, dplyr (>= 0.3), gdata, gender (>= 0.5.1), ggplot2 (>=
2.1.0), grid, gridExtra, igraph, methods, NLP, openNLP (>=
0.2-1), parallel, plotrix, RCurl, reports, reshape2, scales,
stringdist, tidyr, tm (>= 0.7.6), tools, venneuler, wordcloud,
xlsx, XML
chron, dplyr (>= 0.3), gdata, gender (>= 0.5.1), ggplot2 (>=
2.1.0), grid, gridExtra, igraph, methods, NLP, openNLP (>=
0.2-1), parallel, plotrix, RCurl, reshape2, scales, stringdist,
tidyr, tm (>= 0.7.6), tools, utils, venneuler, wordcloud, xlsx,
XML
chron, dplyr (>= 0.3), gender (>= 0.5.1), ggplot2 (>= 2.1.0),
grid, gridExtra, igraph, methods, NLP, openNLP (>= 0.2-1),
openxlsx, parallel, plotrix, RCurl, reshape2, scales,
stringdist, tidyr, tm (>= 0.7.6), tools, utils, venneuler,
wordcloud, XML
chron, data.table (>= 1.9.4), RCurl, XML
chron, data.table (>= 1.9.6), methods, RCurl, XML
shiny, plyr, doParallel, parallel, grDevices
arm, future, future.apply, ggplot2, grDevices, grid,
gridExtra, parallel, stats, survival
arm, future, future.apply, ggplot2, grDevices, grid,
gridExtra, pscl, stats, survival
arm, future, future.apply, generics, ggplot2, grDevices, grid,
gridExtra, pscl, stats, survival, tibble
arm, future, future.apply, generics, ggplot2 (>= 3.3.0),
grDevices, grid, gridExtra, pscl, stats, survival, tibble
arm, future, future.apply, generics, ggplot2 (>= 3.3.0),
grDevices, grid, gridExtra, markdown, pscl, stats, survival,
tibble
qgcomp, arm, survival, future, future.apply, ggplot2,
gridExtra
data.table, parallel, statmod, stats, MCMCpack, MASS
Rcpp (>= 1.0.7), data.table, parallel, statmod, stats,
MCMCpack, MASS
Rcpp (>= 1.0.5), data.table, parallel, statmod, stats,
MCMCpack, MASS
psych, ellipse, lavaan, sem, plyr, methods
psych, ellipse, lavaan, sem, plyr, methods, Hmisc, igraph,
jpeg, png
psych, ellipse, lavaan, sem, plyr, methods, Hmisc, igraph,
jpeg, png, colorspace
psych, ellipse, lavaan, sem, plyr, Hmisc, igraph, jpeg, png,
colorspace
psych, ellipse, lavaan, sem, plyr, Hmisc, igraph, jpeg, png,
colorspace, BDgraph, Matrix, sna, corpcor
psych, ellipse, lavaan, sem, plyr, Hmisc, igraph, jpeg, png,
colorspace, Matrix, sna, corpcor, reshape2, ggplot2, glasso,
huge
psych, ellipse, lavaan, sem, plyr, methods, Hmisc, igraph,
ReadImages, png
psych, ellipse, lavaan, sem, plyr, Hmisc, igraph, jpeg, png,
colorspace, Matrix, sna, corpcor, reshape2, ggplot2, glasso,
huge, fdrtool, d3Network, ggm, gtools
methods, grDevices, psych, ellipse, lavaan, sem, plyr, Hmisc,
igraph, jpeg, png, colorspace, Matrix, sna, corpcor, reshape2,
ggplot2, glasso, huge, fdrtool, d3Network, ggm, gtools
psych, ellipse, lavaan, sem, plyr, Hmisc, igraph, jpeg, png,
colorspace, Matrix, sna, corpcor, reshape2, ggplot2, glasso,
huge, fdrtool, sendplot, d3Network, ggm, gtools
methods, grDevices, psych, ellipse, lavaan, sem, plyr, Hmisc,
igraph, jpeg, png, colorspace, Matrix, sna, corpcor, reshape2,
ggplot2, glasso, huge, fdrtool, d3Network, ggm, gtools, BDgraph
methods, grDevices, psych, ellipse, lavaan, sem, plyr, Hmisc,
igraph, jpeg, png, colorspace, Matrix, sna, corpcor, reshape2,
ggplot2, glasso, huge, fdrtool, d3Network, ggm, gtools,
BDgraph, parallel, pbapply, abind
Rcpp (>= 1.0.0), methods, grDevices, psych, lavaan, plyr,
Hmisc, igraph, jpeg, png, colorspace, Matrix, corpcor,
reshape2, ggplot2, glasso, huge, fdrtool, d3Network, ggm,
gtools, BDgraph, parallel, pbapply, abind
Rcpp (>= 1.0.0), methods, grDevices, psych, lavaan, plyr,
Hmisc, igraph, jpeg, png, colorspace, Matrix, corpcor,
reshape2, ggplot2, glasso, huge, fdrtool, d3Network, ggm,
gtools, BDgraph, parallel, pbapply, abind, dplyr, tidygraph,
ggraph
Rcpp (>= 1.0.0), methods, grDevices, psych, lavaan, plyr,
Hmisc, igraph, jpeg, png, colorspace, Matrix, corpcor,
reshape2, ggplot2, glasso, huge, fdrtool, d3Network, gtools,
BDgraph, parallel, pbapply, abind, dplyr, tidygraph, ggraph
Rcpp (>= 1.0.0), methods, grDevices, psych, lavaan, plyr,
Hmisc, igraph, jpeg, png, colorspace, Matrix, corpcor,
reshape2, ggplot2, glasso, fdrtool, gtools, parallel, pbapply,
abind, dplyr
Rcpp (>= 1.0.0), methods, grDevices, psych, lavaan, plyr,
Hmisc, igraph, jpeg, png, colorspace, Matrix, corpcor,
reshape2, ggplot2, glasso, fdrtool, gtools, parallel, pbapply,
abind
lattice, latticeExtra, graphics, grDevices, stats
lattice, latticeExtra, graphics, grDevices, stats, ggplot2,
scales
lattice, latticeExtra, graphics, grDevices, stats, scales,
ggplot2 (>= 2.0.0), ggrepel
lattice, latticeExtra, graphics, grDevices, stats, scales,
ggplot2 (>= 2.0.0),
dplyr, ggplot2 (>= 2.2.0), scales, stats
dplyr (>= 0.7.0), ggplot2 (>= 2.2.0), scales, stats
stringi (>= 0.2-5), yaml (>= 2.1.11), shiny, docopt,
data.tree, phytools, ape
fields, MASS, qlcMatrix, seriation, spatstat, raster, maps,
mapdata, maptools, mapplots, methods, sp, alphahull
qad, Rcpp (>= 1.0.6), ggplot2, cowplot, dplyr, utils
methods, psych, GPArotation, tools, digest, knitr, xtable
methods, psych, GPArotation, tools, digest, knitr, xtable,
MCMCpack
methods, psych, GPArotation, tools, digest, knitr, xtable,
shiny, rjson
dplyr(>= 0.7.0), tidyr (>= 0.8.2), magrittr, ggplot2, knitr
dplyr, MASS, knitr, purrr, robustbase, rmarkdown
matrixcalc, mvtnorm, ghyp, quantreg, psych, tcltk
matrixcalc, mvtnorm, ghyp, quantreg, psych, tcltk, ald
mvtnorm, lqr, quantreg, psych, tcltk, ald
mvtnorm, lqr, quantreg, psych, ald, progress
lme4, splines, glmmTMB (>= 1.1.1), ggplot2, bookdown
R.utils, assertthat, stats, stringr, utils
nleqslv, quantreg, stringr, survival, ggplot2, Rcpp
splines, coda, Matrix, kernlab, quantreg
graphics, lattice, quantmod, Quandl, zoo, xts, methods,
grDevices, stats, rugarch, utils
graphics, lattice, quantmod, Quandl, zoo, xts, methods,
grDevices, stats, rugarch, utils, ADGofTest
quantmod, Quandl, zoo, methods, grDevices, stats
graphics, lattice, quantmod, Quandl, zoo, methods, grDevices,
stats, rugarch, utils, xts
kernlab, quadprog, Matrix, doParallel, foreach, methods
Rcpp, RApiSerialize, stringfish (>= 0.14.1)
Rcpp, RApiSerialize, stringfish (>= 0.15.0)
Rcpp, RApiSerialize, stringfish (>= 0.15.1)
Rcpp, RApiSerialize (>= 0.1.1), stringfish (>= 0.15.1)
cowplot, ggplot2, gridExtra, purrr, stats
RSQLite, DBI, dplyr, dbplyr, tibble, magrittr
dplyr, glue, methods, processx, purrr, random, readr, ssh,
stringr, tidyr, utils
dplyr, glue, methods, pbapply, processx, purrr, random, readr,
ssh, stringr, tidyr, utils
dplyr, glue, methods, pbapply, processx, purrr, random, readr,
ssh, stringr, tidyr, tools, utils
Hmisc, parallel, quantreg, BMisc, formula.tools, ggplot2,
texreg
Hmisc, parallel, quantreg, BMisc, formula.tools, ggplot2,
texreg, pbapply
Hmisc, parallel, quantreg, BMisc, formula.tools, ggplot2,
texreg, pbapply, knitr, msm
Hmisc, parallel, quantreg, BMisc, formula.tools, ggplot2,
texreg, pbapply, data.table
parallel, graphics, stats, utils, grDevices
Rcpp (>= 0.12.12), yaml (>= 2.1.13), jsonlite (>= 0.9.17),
data.table (>= 1.10.4-3), parallel, stats, utils, graphics,
grDevices, RSQLite
Rcpp (>= 0.12.7), assertthat, dplyr, ggplot2, purrr, stringr,
tidyr, rlang, graphics, RColorBrewer, grid, qtl2
Rcpp (>= 0.12.7), assertthat, dplyr, ggplot2, purrr, stringr,
tidyr, rlang, graphics, RColorBrewer, grid, qtl2, ggrepel
dplyr, tidyr, purrr, stringr, ggplot2, assertthat,
RColorBrewer, qtl2, qtl2fst, fst, rlang, stats, graphics
dplyr, gemma2, ggplot2, magrittr, MASS, Rcpp, rlang, stringr,
tibble, parallel, Matrix
dplyr, gemma2, ggplot2, magrittr, MASS, Rcpp, rlang, tibble,
Matrix, furrr
dplyr, gemma2, ggplot2, magrittr, MASS, Rcpp, rlang, tibble,
parallel
qtl (>= 1.30-4), htmlwidgets, graphics, stats, utils
qtl (>= 1.30-4), htmlwidgets, jsonlite, graphics, stats, utils
ggplot2 (>= 3.1), abind (>= 1.4), MASS (>= 7.3), gtools (>=
3.9.2), CompQuadForm, Matrix, RLRsim, mvtnorm, nlme, quadprog,
parallel, stats, methods, Rcpp (>= 0.12.19)
raster, gridBase, viridis, png, sp, geometry, reproj (>=
0.2.0)
raster, gridBase, viridis, png, sp, geometry, reproj (>=
0.2.0), scales
raster, gridBase, viridis, png, sp, geometry, reproj (>=
0.4.0), scales
raster, gridBase, viridis, png, sp, geometry, reproj (>=
0.4.0), scales, palr
raster, gridBase, png, sp, geometry, reproj (>= 0.4.0),
scales, palr
Rcpp, RcppArmadillo, reshape2, scales, grid, parallel
methods, Rcpp, RcppArmadillo, reshape2, scales, grid, parallel
reshape2, methods, scales, grid, parallel
graphics, grDevices, methods, raster, Rcpp (>= 1.0.5), stats
dplyr, stringr, janitor, openxlsx, readxl
randtoolbox (>= 1.17), graphics, stats, grDevices
randtoolbox (>= 1.17), graphics, stats, grDevices, assertthat,
Rcpp, RcppParallel
randtoolbox (>= 1.17), graphics, stats, grDevices, utils,
assertthat, Rcpp, RcppParallel
httr, stringr, jsonlite, assertthat, sjmisc, lubridate
httr, stringr, jsonlite, assertthat, sjlabelled, lubridate,
yaml
httr, stringr, readr, jsonlite, assertthat, sjlabelled, yaml,
dplyr, rlang
httr, stringr, readr, jsonlite, assertthat, sjlabelled, yaml,
dplyr, rlang, purrr, tibble
httr, stringr, readr, jsonlite, assertthat, sjlabelled, dplyr,
rlang, purrr, tibble
httr, stringr, readr, jsonlite, assertthat, sjlabelled, dplyr,
rlang, purrr, tibble, lifecycle
httr, stringr, readr, jsonlite, assertthat, sjlabelled, dplyr
(>= 1.0), tidyr, rlang, purrr, tibble, lubridate, lifecycle
assertthat, dplyr (>= 1.0), glue, httr, jsonlite, lifecycle,
lubridate, purrr, readr, rlang, sjlabelled, stringr, tibble,
tidyr
cli, dplyr (>= 1.0), glue, httr, jsonlite, lifecycle,
lubridate, purrr, readr, rlang, sjlabelled, stringr, tibble,
tidyr
foreach, doParallel, methods, stats, utils, MASS, mvtnorm,
graphics, grDevices
foreach, doParallel, stats, utils, MASS, mvtnorm, graphics,
grDevices,ggthemes,QUALYPSO
graphics, KernSmooth, locpol, np, quantreg, quantregGrowth,
stats
scales, gplots, RColorBrewer, pROC, caret, e1071, Matrix
Matrix, RColorBrewer, caret, dplyr, e1071, ggplot2, ggrepel,
gplots, readr, reshape2, rlang, plyr, pROC, scales, stringr,
tibble, tidyr
methods, Matrix (>= 1.1), data.table (>= 1.9.3), SnowballC,
wordcloud, proxy, Rcpp, ca
methods, utils, stats, Matrix (>= 1.1), data.table (>= 1.9.3),
SnowballC, wordcloud, proxy, parallel, Rcpp, ca, stringi
methods, utils, stats, Matrix (>= 1.2), data.table (>= 1.9.6),
SnowballC, wordcloud, proxy, parallel, Rcpp, ca, stringi
methods, utils, stats, Matrix (>= 1.2), data.table (>= 1.9.6),
SnowballC, wordcloud, proxy, parallel, Rcpp, ca, stringi, httr
methods, utils, stats, Matrix (>= 1.2), data.table (>= 1.9.6),
SnowballC, wordcloud, proxy, Rcpp, RcppParallel, ca, stringi,
fastmatch, ggplot2 (>= 2.2.0), yaml
methods, utils, stats, Matrix (>= 1.2), data.table (>= 1.9.6),
SnowballC, wordcloud, proxy, Rcpp, RcppParallel, ca, stringi,
fastmatch, ggplot2 (>= 2.2.0)
utils, stats, Matrix (>= 1.2), data.table (>= 1.9.6),
SnowballC, wordcloud, Rcpp, RcppParallel, RSpectra, stringi,
fastmatch, ggplot2 (>= 2.2.0), XML, yaml
utils, stats, Matrix (>= 1.2), data.table (>= 1.9.6),
SnowballC, wordcloud, Rcpp (>= 0.12.12), RcppParallel,
RSpectra, stringi, fastmatch, ggplot2 (>= 2.2.0), XML, yaml,
lubridate, magrittr
utils, stats, Matrix (>= 1.2), data.table (>= 1.9.6),
SnowballC, wordcloud, Rcpp (>= 0.12.12), RcppParallel,
RSpectra, stringi, fastmatch, ggplot2 (>= 2.2.0), XML, yaml,
lubridate, magrittr, spacyr
utils, stats, Matrix (>= 1.2), data.table (>= 1.9.6),
SnowballC, wordcloud, Rcpp (>= 0.12.12), RcppParallel,
RSpectra, stringi, fastmatch, ggplot2 (>= 2.2.0), XML, yaml,
lubridate
utils, extrafont, digest, stats, Matrix (>= 1.2), data.table
(>= 1.9.6), SnowballC, wordcloud, sna, network, ggrepel, Rcpp
(>= 0.12.12), RcppParallel, RSpectra, stringi, fastmatch,
ggplot2 (>= 2.2.0), XML, yaml, lubridate, magrittr, spacyr,
stopwords
extrafont, Matrix (>= 1.2), data.table (>= 1.9.6), SnowballC,
sna, network, ggrepel, Rcpp (>= 0.12.12), RcppParallel,
RSpectra, stringi, fastmatch, ggplot2 (>= 2.2.0), XML, yaml,
lubridate, magrittr, spacyr, stopwords
extrafont, Matrix (>= 1.2), data.table (>= 1.9.6), SnowballC,
sna, ggrepel, network, Rcpp (>= 0.12.12), RcppParallel,
RSpectra, stringi, fastmatch, ggplot2 (>= 2.2.0), XML, yaml,
lubridate, magrittr, spacyr, stopwords
data.table (>= 1.9.6), extrafont, fastmatch, ggplot2 (>=
2.2.0), ggrepel, lubridate, magrittr, Matrix (>= 1.2), network,
RSpectra, Rcpp (>= 0.12.12), RcppParallel, sna, SnowballC,
spacyr, stopwords, stringi, xml2, yaml
data.table (>= 1.9.6), extrafont, fastmatch, ggplot2 (>=
2.2.0), ggrepel, lubridate, magrittr, Matrix (>= 1.2), network,
RSpectra, Rcpp (>= 0.12.12), RcppParallel, sna, SnowballC,
spacyr, stopwords, stringi, xml2, yaml, proxyC (>= 0.1.4)
data.table (>= 1.9.6), extrafont, fastmatch, ggplot2 (>=
2.2.0), ggrepel, jsonlite, magrittr, Matrix (>= 1.2), network,
Rcpp (>= 0.12.12), RcppParallel, sna, SnowballC, stopwords,
stringi, xml2, yaml, proxyC (>= 0.1.4)
data.table (>= 1.9.6), extrafont, fastmatch, ggplot2 (>=
2.2.0), ggrepel, jsonlite, magrittr, Matrix (>= 1.2), network,
Rcpp (>= 0.12.12), RcppParallel, sna, SnowballC, stopwords,
stringi, xml2, yaml, proxyC (>= 0.1.4), digest
fastmatch, magrittr, Matrix (>= 1.2), Rcpp (>= 0.12.12),
RcppParallel, SnowballC, stopwords, stringi, xml2, yaml
ggplot2, LiblineaR, Matrix (>= 1.2), quanteda (>= 2.0),
RSpectra, Rcpp (>= 0.12.12), RcppParallel, RSSL, SparseM,
stringi
ggplot2, glmnet, LiblineaR, Matrix (>= 1.2), quanteda (>=
2.0), RSpectra, Rcpp (>= 0.12.12), RcppParallel, SparseM,
stringi
glmnet, LiblineaR, Matrix (>= 1.2), quanteda (>= 2.0),
RSpectra, Rcpp (>= 0.12.12), RcppParallel, SparseM, stringi
quanteda, quanteda.textmodels, quanteda.textstats, data.table,
extrafont, ggplot2, ggrepel, grid, sna, igraph, Matrix,
methods, network, RColorBrewer, Rcpp (>= 0.12.12), stringi
quanteda, data.table, extrafont, ggplot2, ggrepel, grid, sna,
igraph, Matrix, methods, network, RColorBrewer, Rcpp (>=
0.12.12), stringi
quanteda, extrafont, ggplot2, ggrepel, grid, sna, igraph,
Matrix, methods, network, RColorBrewer, Rcpp (>= 0.12.12),
stringi
quanteda, data.table (>= 1.9.6), digest, Matrix (>= 1.2),
methods, nsyllable, proxyC (>= 0.1.4), Rcpp (>= 0.12.12),
RcppParallel, stringi
quanteda, Matrix, methods, nsyllable, proxyC (>= 0.1.4), Rcpp
(>= 0.12.12), RcppParallel, stringi
stringr, rgenoud (>= 5.7), quantreg (>= 5.18), parallel,
stats, methods, Rdpack
stringr, rgenoud (>= 5.7), quantreg (>= 5.18), parallel,
methods, Rdpack
methods, graphics, Matrix, MatrixModels, conquer
methods, graphics, Matrix, MatrixModels, survival, MASS
methods, graphics, quantreg, testthat, abind, zoo, rje,
snowfall
methods, graphics, quantreg, abind, zoo, snowfall, Rcpp (>=
0.11.0)
graphics, progress, rugarch, smoots, stats
dygraphs, ggplot2, graphics, progress, rugarch, shiny,
shinyjs, smoots, stats, yfR, xts
shiny (>= 0.10), highr, classInt, htmltools
shiny (>= 0.11), highr, classInt, htmltools
shiny (>= 0.13), miniUI, rstudioapi, highr, classInt,
htmltools, graphics, stats, utils
shiny (>= 0.13), miniUI, rstudioapi, highr, classInt,
htmltools, graphics, stats, utils, labelled (>= 1.0.0)
shiny (>= 0.13), DT, miniUI, rstudioapi, highr, classInt,
htmltools, graphics, stats, utils, labelled (>= 1.0.0)
shiny (>= 1.0.5), miniUI, rstudioapi, highr, classInt,
htmltools, graphics, stats, utils, labelled (>= 1.0.0)
shiny (>= 1.0.5), miniUI, rstudioapi, highr, classInt,
htmltools, graphics, stats, utils, labelled (>= 2.0.0)
shiny (>= 1.0.5), miniUI, rstudioapi, highr, styler, classInt,
htmltools, graphics, stats, utils, labelled (>= 2.4.0), haven
(>= 2.3.0)
shiny (>= 1.0.5), miniUI, rstudioapi, highr, styler, classInt,
htmltools, graphics, stats, utils, labelled (>= 2.6.0)
data.table (>= 1.10.4), ggplot2, grDevices, grid, gridBase,
igraph, methods, raster, RColorBrewer, rgdal, sp, stats
data.table (>= 1.10.4), fpCompare, ggplot2, grDevices, grid,
gridBase, igraph, methods, raster, RColorBrewer, rgdal, rgeos,
sp, stats
backports, data.table (>= 1.10.4), fpCompare, ggplot2,
grDevices, grid, gridBase, igraph, methods, raster,
RColorBrewer, rgdal, rgeos, sp, stats
ggplot2 (>= 2.0.0), survival, psych, utils, stats
ggplot2 (>= 2.0.0), survival, psych, utils, stats, nortest
ggplot2 (>= 2.0.0), rlang (>= 0.1.2), survival, psych, utils,
stats, nortest, dplyr
testthat (>= 3.0.0), hedgehog, purrr, tibble, data.table, hms,
stats
testthat (>= 3.0.0), hedgehog, purrr, tibble, data.table, hms,
stats, magrittr
rgeos, sp, rgdal, stats, grDevices, graphics, methods, httr,
raster
raster, sp, rgeos, rgdal, httr, stats, grDevices, graphics,
methods
raster, sp, rgeos, rgdal, httr, stats, grDevices, graphics,
methods, sf
BayesFactor, MCMCpack, checkmate, ellipsis, janitor, purrr,
rlang, stringr, methods, magrittr, dplyr, ggplot2, tibble,
tidyr, tidyselect, Matrix
stringr, magrittr, vroom, purrr, glue, dplyr, tidyjson,
tibble, lubridate, rlang, tidyr, httr, utils, rvest, progress,
methods, writexl, concatenate, memoise
stats, quantreg, purrr, magrittr, ALDqr, bayesQR, MCMCpack,
ggplot2, knitr, gridExtra, GIGrvg, dplyr, tidyr, robustbase,
ald
dplyr, ggplot2, knitr, Rcpp, tidyr, utils
devtools, dplyr, ggplot2, knitr, magrittr, Rcpp (>= 0.12.11),
rlang, tidyr, utils
dplyr, ggplot2, knitr, magrittr, Rcpp (>= 0.12.11), rlang,
tidyr, utils
dplyr (>= 1.0.0), ggplot2, knitr, Rcpp (>= 0.12.11), rlang,
utils, xfun
SpatioTemporal, gplots, abind, graphics, stats
graphics, grDevices, KernSmooth, MASS, sp
htmlwidgets (>= 1.2), htmltools, jsonlite, rstudioapi
dplyr, magrittr, rlang (>= 0.1.2), tidyr
dplyr, glue, magrittr, r2dii.data, rlang (>= 0.1.2), tidyr,
tidyselect
dplyr (>= 0.8.5), glue, magrittr, r2dii.data, rlang, tidyr,
tidyselect, zoo
dplyr (>= 0.8.5), glue, magrittr, r2dii.data, rlang (>=
0.1.2), tidyr, tidyselect, zoo
dplyr (>= 0.8.5), glue, lifecycle, magrittr, r2dii.data, rlang
(>= 0.1.2), tidyr, tidyselect, zoo
dplyr, glue, magrittr, purrr, r2dii.data, rlang, stringdist,
stringi, tibble, tidyr, tidyselect
data.table, dplyr (>= 0.8.5), glue, magrittr, purrr,
r2dii.data, rlang, stringdist, stringi, tibble, tidyr,
tidyselect, utils
dplyr, glue, magrittr, purrr, r2dii.data, rlang, stringdist,
stringi, tibble, tidyr, tidyselect, vctrs
dplyr (>= 0.8.5), glue, magrittr, purrr, r2dii.data, rlang,
stringdist, stringi, tibble, tidyr, tidyselect
data.table, dplyr (>= 0.8.5), glue, lifecycle, magrittr,
purrr, r2dii.data, rlang, stringdist, stringi, tibble, tidyr,
tidyselect, utils
dplyr, forcats, ggplot2, ggrepel, glue, gridExtra, lubridate,
magrittr, r2dii.data, rlang, scales
dplyr, forcats, ggplot2, ggrepel, glue, lubridate, magrittr,
r2dii.data, rlang, scales
dplyr, forcats, ggplot2, ggrepel, glue, magrittr, r2dii.data,
rlang, scales
dplyr, forcats, ggplot2, ggrepel, glue, magrittr, r2dii.data,
rlang, stringr, scales, lifecycle
mgcv, lmerTest, Matrix, pbkrtest, ggplot2, afex, stats, MASS,
dplyr
mgcv, lmerTest, Matrix, pbkrtest, ggplot2, afex, stats, MASS,
gridExtra, grid, data.table, dplyr
htmlwidgets, htmltools, jsonlite, ellipsis, vctrs
boot, dplyr, ggplot2, ggrepel, here, magick, magrittr, pROC,
psych, purrr, stats, utils
coda, corpcor, gplots, gtools, maps, pso, RCurl, tcltk
coda, corpcor, gplots, gtools, maps, pso, tcltk, truncnorm
coda, corpcor, gdata, gplots, gtools, pso, truncnorm,
kableExtra
coda, corpcor, dplyr, forcats, ggplot2, lifecycle, stringr,
kableExtra
checkmate, data.table, methods, jdx (>= 0.1.4), rJava (>=
0.9-13), sf (>= 0.9-3), sfheaders, utils
checkmate, data.table, methods, jdx (>= 0.1.4), rJava (>=
0.9-10), sf (>= 0.9-3), sfheaders, utils
checkmate, curl, data.table, httr, methods, jdx (>= 0.1.4),
rJava (>= 0.9-10), sf (>= 0.9-3), sfheaders, utils
checkmate, curl, data.table, httr, methods, jdx (>= 0.1.4),
raster, rJava (>= 0.9-10), sf (>= 0.9-3), sfheaders, utils
checkmate, curl, data.table, httr, methods, raster, rJava (>=
0.9-10), sf (>= 0.9-3), sfheaders, utils
glue, rstudioapi, miniUI, shiny, dplyr, magrittr, stringr,
purrr
checkmate, crul, dplyr, fauxpas, fs, hoardr, janitor,
magrittr, purrr, rlang, rlist, tibble, tidyjson, tidyr
checkmate, crul, curl, dplyr, fauxpas, fs, hoardr, janitor,
magrittr, purrr, rlang, rlist, tibble, tidyjson, tidyr
methods, htmlwidgets, rlist, data.table, graphics, utils
methods, htmlwidgets, htmltools, rlist, data.table, graphics,
utils
methods, htmlwidgets, htmltools, rlist, data.table (>= 1.9.6),
graphics, utils, pipeR, knitr, grDevices
methods, htmlwidgets, htmltools, rlist, data.table (>= 1.9.6),
graphics, utils, pipeR, knitr, grDevices, yaml
methods, htmlwidgets, htmltools, data.table (>= 1.9.6),
graphics, utils, pipeR, knitr, grDevices, yaml
methods, htmlwidgets, htmltools, data.table (>= 1.9.6),
graphics, utils, pipeR, knitr, grDevices, yaml, zoo
htmltools, htmlwidgets, reactR, shiny, jsonlite, lubridate,
minpack.lm, tools, base64enc, xml2, stringr, stats, grDevices
htmltools, htmlwidgets (>= 1.5.3), reactR, shiny, jsonlite,
lubridate, minpack.lm, tools, base64enc, xml2, stringr, stats,
grDevices
stringr, XML, RCurl, scrapeR, gdata, scales, rgdal, maptools,
raster, sp, tools
stats, utils, data.table, magrittr, foreach, doParallel, GPfit
stats, utils, data.table (>= 1.9.6), magrittr, foreach, GPfit
data.table, future, future.apply, ggplot2, ggpubr, magrittr,
nls2, polynom, stats
data.table, future, future.apply, ggplot2, magrittr, nls2,
polynom, stats, utils
R.utils, TunePareto, methods, stats, utils
data.table, graphics, colorspace, R.utils, qgraph
data.table, graphics, colorspace, R.utils, qgraph, stringr
assertthat, cli, configr, dplyr, git2r, httr, jsonlite,
openssl, R6, rhdf5, semver, stats, usethis, utils, yaml
assertthat, stringr, foreign, parallel, readstata13, combinat,
xlsx
methods, stats, clusterGeneration, MASS, utils
methods, stats, cluster, clusterGeneration, MASS, utils
methods, stats, stream, cluster, clusterGeneration, MASS,
utils
data.table, Rcpp, R6, methods, foreach, stats, plotly,
doParallel, parallel, RcppRoll, data.tree, scales, magrittr
data.table, Rcpp, R6, methods, foreach, stats, plotly,
doParallel, parallel, RcppRoll, data.tree, scales, magrittr,
rmarkdown
data.table, Rcpp, R6, methods, foreach, stats, plotly,
doParallel, parallel, data.tree, scales, magrittr
data.table, Rcpp, R6, methods, foreach, stats, plotly,
doParallel, parallel, scales, magrittr
data.table, Rcpp, R6, methods, foreach, stats, plotly,
doParallel, parallel, scales, magrittr, concatenate
survival, stats4, plyr, dplyr, reshape2, numDeriv, ggplot2
dplyr, stringr, sp, sf, tidyr (>= 1.0.0), parallel, ggplot2,
gganimate, methods, data.table, bit64, progress
dplyr, stringr, sp, sf, tidyr (>= 1.0.0), parallel, ggplot2,
gganimate, methods, data.table, bit64, progress, tidyselect (>=
1.0.0), purrr
dplyr, stringr, sp, sf, tidyr (>= 1.0.0), parallel, ggplot2,
gganimate, methods, data.table, bit64, progress, tidyselect (>=
1.0.0), purrr, rlang, dtplyr (>= 1.0.0), R2jags, coda
dplyr (>= 1.0.0), dtplyr (>= 1.0.0), tidyr (>= 1.0.0),
stringr, sf, parallel, methods, data.table, bit64, tidyselect
(>= 1.0.0), rlang, ggplot2, lifecycle
dplyr (>= 1.0.0), dtplyr (>= 1.0.0), tidyr (>= 1.0.0),
stringr, sf, parallel, methods, data.table, bit64, tidyselect
(>= 1.0.0), rlang, ggplot2
parallel, methods, tibble, rPref, tidyr, hash
stats, utils, data.table (>= 1.9.6), Matrix, FeatureHashing,
magrittr, foreach, Rcpp, RcppProgress
bit64, curl, data.table, fs, getPass, ggplot2, hdf5r,
jsonlite, lazyeval, raster, RColorBrewer, sp, stats
bit64, curl, data.table, fs, getPass, ggplot2, hdf5r,
jsonlite, lazyeval, raster, rgdal, rgeos, RColorBrewer, sp,
stats
randomNames, dplyr, matlab, lubridate, stringr, stringi
httr, utils, iptools, dplyr, graphics, amerika
httr, utils, iptools, dplyr, graphics, amerika, jsonlite
magrittr, quanteda, reshape2, Rcpp (>= 0.12.12), RcppProgress,
SnowballC
magrittr, quanteda, reshape2, Rcpp, RcppProgress, SnowballC
ggplot2, ape, circlize, ComplexHeatmap, reshape2, utils,
stats, dplyr, factoextra, FactoMineR, ggpubr, magrittr, stringr
tibble, dplyr, glue, stringr, httr, jsonlite, magrittr, tidyr,
purrr, stringi, ggplot2, rlang
tibble, dplyr, glue, stringr, httr, jsonlite, magrittr, tidyr,
purrr, rlang, urltools
RCurl, svMisc, httr, jsonlite, dplyr, readr, stringr
bitops, deldir, geometry, methods, plyr, raster, rgeos, rgl,
sp, spatstat.geom
utils, stats, methods, graphics, grDevices, Rcpp
utils, stats, methods, graphics, grDevices, MASS, Rcpp
utils, stats, methods, graphics, grDevices, MASS, Rcpp,
bigmemory
PerformanceAnalytics, quantmod, xts, stringr, rvest, xml2,
readr, purrr, tidyr, stringi, ggplot2, dplyr
gaston, Matrix, stats, graphics, RcppParallel
gaston, Matrix, RcppParallel, stats, graphics
stats, graphics, grDevices, bnlearn, ggplot2, tidyr, ggpubr,
rlang
methods, XML, xml2, Seurat, pbapply, Matrix
dplyr, httr, jsonlite, magrittr, tibble, tidyr, rlang, purrr,
glue, methods
dplyr, httr, jsonlite, magrittr, tibble, tidyr, rlang, purrr,
glue, methods, websocket, later, lifecycle
dplyr (>= 1.0.0), httr, jsonlite, magrittr, tibble (>= 3.0.0),
tidyr, rlang, purrr, glue, methods, websocket, later, lifecycle
DALEX, dendextend, ggplot2, ggpubr, grDevices, ingredients,
sets, stats
ggplot2, lattice, qcc, grid, methods, grDevices, graphics,
stats
abind, graphics, sn, VGAM, evd, stats, utils, RSQLite, DBI,
foreach, parallel, doParallel
raster, RMark, ggplot2, tcltk2, sp, grid, plyr, tcltk
raster, RMark, ggplot2, tcltk2, sp, grid, plyr, tcltk,
grDevices, methods, stats, utils
ncdf4, zoo, stringr, EcoHydRology, dplyr, gsubfn, yaml, mise,
reshape2, qmap, ggplot2
Rcpp (>= 1.0.8.3), Rdpack, igraph, graph
bitops, dplyr, geosphere, ggplot2, ggrepel, googleway, httr,
httpuv, magrittr, plyr, RCurl, rvest, tidyr, XML, xml2, purrr,
tibble, V8
RSelenium, httr, rworldmap, ggplot2, maps, rvest, XML, xml2,
stringr, treemap, magick, Hmisc, crayon, dplyr, sf, mapview,
sp, methods, RCurl, sys, knitr
alphashape3d, boot, doSNOW (>= 1.0.16), foreach (>= 1.4.4),
parallel (>= 3.6.0), Rcpp (>= 1.0.3), RcppProgress (>= 0.4.2),
rgeos, rgl, sp
alphashape3d, boot, doSNOW (>= 1.0.16), foreach (>= 1.4.4),
parallel (>= 3.6.0), Rcpp (>= 1.0.3), RcppProgress (>= 0.4.2),
RcppHNSW (>= 0.3.0), rgeos, rgl, sp
methods,rTensor, wavethresh, gsignal, Matrix, matrixcalc
logging, reticulate, jsonlite (>= 1.2), utils, methods, R6,
rstudioapi (>= 0.7), data.table
reticulate (>= 1.10), jsonlite (>= 1.2), utils, methods,
rstudioapi (>= 0.7),
bookdown, conflicted, rmarkdown, table1, tidyverse
bookdown, conflicted, rlang, rmarkdown, table1, tidyverse,
usethis
ggplot2, httr, plyr, rgdal, jsonlite, reshape2, sp
raster, shape, gdistance, Matrix, igraph (>= 1.0)
raster (>= 2.5-8), gdistance, Matrix, lubridate
dplyr (>= 0.5.0), reshape2, plotly (>= 4.7.1), gtools (>=
3.5.0), cowplot (>= 0.9.1), stats, dendextend (>= 1.9.0),
data.table, ggdendro (>= 0.1.20), gridExtra, alakazam (>=
0.2.10), tigger (>= 0.2.11), methods, htmlwidgets, gtable,
grDevices, rlang, RColorBrewer, tidyr
dplyr (>= 0.5.0), reshape2, plotly (>= 4.7.1), gtools (>=
3.5.0), cowplot (>= 0.9.1), stats, dendextend (>= 1.9.0),
data.table, ggdendro (>= 0.1.20), gridExtra, alakazam (>=
0.2.10), tigger (>= 0.2.11), methods, htmlwidgets, gtable,
grDevices, rlang, RColorBrewer, tidyr, stringi
numbers, polynom, stringdist, stats, utils
numbers, polynom, shiny, stringdist, stats, utils
numbers, polynom, shiny, stringdist, stats, utils, methods
cli, dplyr, httr2, pbapply, purrr, rappdirs, retry, rlang,
stringr, tidyr, utils, withr
fasterize, methods, plotwidgets, raster, sf, Rcpp, comat
fasterize, methods, plotwidgets, raster, rgdal, sf, Rcpp,
comat
dplyr, httr, pbapply, stringr, tidyr, cli
dplyr, httr, pbapply, stringr, tidyr, cli, retry
utils, stats, tools, rmarkdown (>= 1.10), htmltools, jsonlite
(>= 1.3), lubridate, png, mime, rstudioapi, rprojroot, xml2,
base64enc, whisker, downloader, progress, stringr, knitr (>=
1.15.6), digest, yaml
data.table, lexicon, stringr (>= 1.4), utils
ggplot2, readr, stats, graphics, RadData, stringr, magrittr,
dplyr, rlang
ggplot2, readr, stats, graphics, RadData, stringr, magrittr,
dplyr, rlang, ggthemes
ggplot2, readr, stats, graphics, RadData, stringr, magrittr,
dplyr, rlang, scatterplot3d, ggthemes
ggplot2, readr, stats, graphics, RadData, stringr, magrittr,
dplyr, rlang, scatterplot3d, ggthemes, qpdf, utf8
oro.dicom, dplyr, Hmisc, oro.nifti, magrittr, methods
oro.dicom, dplyr, Hmisc, oro.nifti, magrittr, methods,
TCIApathfinder, R.utils, xfun
systemfonts (>= 1.0.0), textshaping (>= 0.3.0)
systemfonts (>= 1.0.3), textshaping (>= 0.3.0)
stats, expm, reshape, ggplot2, igraph, Hmisc
igraph, stats, expm, reshape, ggplot2, Hmisc, fdrtool,
snowfall
igraph, stats, methods, expm, reshape, ggplot2, Hmisc,
fdrtool, snowfall, sfsmisc, utils, grDevices, graphics
igraph, stats, methods, expm, reshape, ggplot2, Hmisc,
fdrtool, snowfall, sfsmisc, utils, grDevices, graphics, gRbase,
RBGL, graph, Rcpp, RSpectra
igraph, stats, methods, expm, reshape, ggplot2, Hmisc,
fdrtool, snowfall, sfsmisc, utils, grDevices, graphics, gRbase,
RBGL, graph
expm, fdrtool, graph, graphics, grDevices, marray, Matrix,
mvtnorm, RBGL, stats, utils
expm, fdrtool, graph, graphics, grDevices, marray, Matrix,
methods, mvtnorm, RBGL, stats, utils
abind, expm, fdrtool, graph, graphics, grDevices, marray,
MASS, Matrix, methods, mvtnorm, RBGL, stats, utils
abind, expm, fdrtool, graphics, grDevices, marray, MASS,
Matrix, methods, mvtnorm, stats
abind, expm, fdrtool, graphics, grDevices, MASS, Matrix,
methods, mvtnorm, stats
abind, expm, fdrtool, graphics, grDevices, MASS, Matrix,
methods, mvtnorm, stats, Biobase, CGHbase
hdrcde, cluster, colorspace, ks, methods
dplyr (>= 0.8.3), tidyr, purrr, ggplot2, stringr, quanteda (>=
1.5), RSpectra, dendextend, ggwordcloud, gridExtra, rlang,
RColorBrewer, shiny, miniUI, formatR, highr, future,
future.apply, progressr, Rcpp (>= 1.0.3)
dplyr (>= 0.8.3), tidyr, purrr, ggplot2, stringr, quanteda (>=
2.1), quanteda.textstats, RSpectra, dendextend, ggwordcloud,
gridExtra, rlang, RColorBrewer, shiny, miniUI, formatR, highr,
progressr, Rcpp (>= 1.0.3)
dplyr (>= 1.0.0), tidyr, purrr, ggplot2, stringr, quanteda (>=
2.1), quanteda.textstats, RSpectra, dendextend, ggwordcloud,
gridExtra, rlang, shiny, miniUI, formatR, highr, progressr,
Rcpp (>= 1.0.3)
dplyr (>= 1.0.0), tidyr, purrr, ggplot2, stringr, quanteda (>=
2.1), quanteda.textstats, RSpectra, dendextend, ggwordcloud,
gridExtra, rlang, shiny, miniUI, highr, progressr, Rcpp (>=
1.0.3)
httr, jsonlite, data.table, tibble, dplyr, cli, crayon, rlang,
snow, progress
magrittr, rvest, xml2, testthat, tidyr, dplyr, stringr
magrittr, rvest, xml2, testthat, tidyr, dplyr, stringr,
robotstxt, crayon, purrr
magrittr, rvest, xml2, testthat, tidyr, dplyr, stringr,
robotstxt, crayon, purrr, curl
magrittr, rvest, xml2, testthat, tidyr, dplyr, stringr,
robotstxt, crayon, curl, stringi
rvest, xml2, tidyr, dplyr, stringr, robotstxt, crayon, curl,
stringi
httr, urltools (>= 1.7.3), lubridate, dplyr, jsonlite,
magrittr
fields, graphics, grDevices, methods, stats
methods, stats, poweRlaw, RSpectra, irlba
methods, stats, poweRlaw, RSpectra, irlba,pracma,nnls
ddR, stats, randomForest (>= 4.6-10), Matrix
Hmisc, geometry, survival, matrixStats, parallel
boot, fastGHQuad, Matrix, Rfast, parallel
boot, fastGHQuad, Matrix, Rfast, parallel, doParallel, doRNG,
foreach
crayon, data.table (>= 1.12.0), toOrdinal (>= 1.1)
crayon, data.table (>= 1.14.0), toOrdinal (>= 1.1)
methods, Rcpp (>= 0.11.1), parallel, doParallel, foreach (>=
1.4.2), ggplot2, pROC, gtools
methods, Rcpp (>= 0.11.1), parallel, doParallel, iterators,
foreach (>= 1.4.2), ggplot2, pROC, gtools
methods, Rcpp (>= 0.11.1), parallel, doParallel, iterators,
foreach (>= 1.4.2), ggplot2, pROC, gtools, cluster, MASS
methods, Rcpp (>= 0.11.1), parallel, doParallel, iterators,
foreach (>= 1.4.2), ggplot2, pROC, cluster, MASS
colorspace, stringr, V8, stats, methods, scales, Rtsne,
grDevices, cluster
permute (>= 0.7-8), matrixStats, graphics, stats
checkmate (>= 1.8.2), parallelMap (>= 1.3), fs
alphahull, stringi, rgeos (>= 0.1-4), methods
alphahull, stringi, rgeos (>= 0.1-4), pbapply, cleangeo,
methods, Rcpp (>= 0.12.9)
alphahull (>= 2.5), stringi, stringdist, rgeos (>= 0.1-4),
raster, pbapply, cleangeo, methods, Rcpp (>= 0.12.9)
alphahull (>= 2.5), stringi, sf, terra, pbapply, units,
rnaturalearth, methods, Rcpp (>= 0.12.9)
sp, raster, maptools, RSQLite.extfuns, lattice, RColorBrewer,
classInt
sp, rgeos, raster, maptools, lattice, RColorBrewer, classInt
methods, sp, rgdal, RSQLite(>= 1.0.0), rgeos, raster,
maptools, gridExtra, lattice, ggplot2, RColorBrewer, classInt,
magrittr, data.table, foreach
methods, sp, rgdal, rgeos, raster, maptools, gridExtra,
lattice, ggplot2, RColorBrewer, classInt, magrittr, data.table,
foreach
methods, sp, rgdal, rgeos, raster, maptools, gridExtra,
lattice, ggplot2, RColorBrewer, classInt, magrittr, data.table,
foreach, future, doFuture, future.apply
graphics, methods, glue, future, future.apply, progressr, sf,
RSQLite, DBI, magrittr, data.table, raster, exactextractr
googlesheets, spocc, raster, dismo, utils, shiny, jsonlite,
dplyr, sp, MASS, biomod2, ecospat, rgdal, rgeos, spatstat,
ENMeval
biomod2, dismo, dplyr, ecospat, ENMeval, googlesheets,
jsonlite, MASS, raster, rgbif, rgdal, rgeos, shiny, sp,
spatstat, spocc, spThin, utils
dplyr, jsonlite, MASS, raster, rgbif, rgdal, rgeos, shiny, sp,
spatstat, spocc, spThin, utils
methods, Rcpp (>= 0.11.4), hash, optimx,
Rcpp (>= 0.11.4), hash, optimx, permute, methods
DBI, devtools, digest, gistr, httr, knitr, magrittr, readr,
RJDBC, RMariaDB, sendmailR, shiny, utils, yaml
base64enc, bookdown, DBI, digest, dplyr, DT, jsonlite,
kableExtra, knitr, magrittr, readr, rlang, RMariaDB, rmarkdown,
rpivotTable, sendmailR, shiny, shinyalert, sship (>= 0.8.0),
utils, yaml
grDevices, utils, yaml, stringr, rapportools, pander
jsonlite, xml2, tibble, magrittr, tidyr, dplyr, rlang
jsonlite, tibble, magrittr, tidyr, dplyr, rlang
utils, boot, grDevices, PBSmapping, graphics, stats, scales,
shape, Matrix, adehabitatHR, RgoogleMaps, RandomFields,
RColorBrewer, plyr, parallel, doParallel, rgeos, hypervolume,
ks, gdalUtils, mvtnorm, ggplot2, testthat
utils, boot, grDevices, PBSmapping, graphics, stats, scales,
shape, Matrix, adehabitatHR, RgoogleMaps, RandomFields,
RColorBrewer, plyr, parallel, doParallel, rgeos, hypervolume(>=
2.0.7), ks, gdalUtils, mvtnorm, ggplot2, testthat
utils, methods, assertthat, Matrix, boot, grDevices,
PBSmapping, graphics, stats, scales, shape, adehabitatHR,
RgoogleMaps, RandomFields, RColorBrewer, plyr, parallel,
doParallel, rgeos, rgdal, hypervolume(>= 2.0.7), ks, gdalUtils,
mvtnorm, ggplot2
utils, methods, assertthat, Matrix, boot, grDevices,
PBSmapping, graphics, stats, scales, shape, adehabitatHR,
RgoogleMaps, RandomFields, RColorBrewer, plyr, parallel,
doParallel, rgeos, rgdal, hypervolume(>= 2.0.7), ks, mvtnorm,
ggplot2
document, git2r, highr, knitr, reticulate, xfun
checkmate, document, git2r, highr, knitr, reticulate, xfun
checkmate, document, fritools, gert, highr, knitr, reticulate,
xfun
checkmate, document, fritools (>= 1.2.0), gert, highr, knitr,
reticulate, xfun
checkmate, document (>= 3.3.0), fritools (>= 1.2.0), gert,
highr, knitr, reticulate, tools
checkmate, document (>= 3.3.0), fritools (>= 1.3.0), gert,
highr, knitr, reticulate, tools
methods, car, nnet, RSNNS, e1071, randomForest
mvtnorm (>= 1.0-0), polyCub (>= 0.5-0), spatstat (>= 1.36-0),
rgl, sm, phytools
mvtnorm (>= 1.0-0), polyCub (>= 0.5-0), spatstat (>= 1.36-0),
rgl, sm, methods, grDevices, stats,
mvtnorm (>= 1.0-0), rgl, sm, methods, grDevices, stats,
grid, sp, lattice, latticeExtra, zoo, hexbin
grid, grDevices, sp (>= 1.0-6), zoo, RColorBrewer
grid, grDevices, sp (>= 1.0-6), zoo, hexbin, RColorBrewer
stats, utils, parallel, grid, grDevices, RColorBrewer, hexbin,
sp (>= 1.0-6), zoo,
stats, utils, parallel, grid, grDevices, RColorBrewer, hexbin,
sp (>= 1.0-6), zoo, viridisLite
raster (>= 3.4-13), terra (>= 1.4-9), latticeExtra, stats,
utils, parallel, grid, grDevices, RColorBrewer, hexbin, sp (>=
1.0-6), zoo, viridisLite
raster, parallel, doParallel, methods, foreach, proxy, svMisc
raster, parallel, doParallel, methods, foreach, proxy, svMisc,
pbapply, pbmcapply
methods, proxy, foreach, progress, svMisc
methods, proxy, foreach, progress, svMisc, terra
data.table, rlang, plotly, ggplot2, magrittr
data.table, rlang, plotly, ggplot2, magrittr, grid, stats
dplyr, ggplot2, ggpubr, ggsci, hms, lubridate, magrittr, plyr,
rjson, stats, stringr, tidyr
dplyr, ggplot2, ggpubr, ggsci, hms, lubridate, magrittr,
plotly, plyr, rjson, stats, stringr, tidyr, utils
ape, geiger, coda, corpcor, MASS, phylolm, readr, mvMORPH,
Rcpp, ellipse
stats, utils, grDevices, graphics, methods, RGtk2, magrittr,
stringi
stats, utils, ggplot2, grDevices, graphics, magrittr, methods,
RGtk2, stringi, stringr, tidyr, dplyr, cairoDevice, XML,
rpart.plot
stats, utils, ggplot2, grDevices, graphics, magrittr, methods,
stringi, stringr, tidyr, dplyr, XML, rpart.plot
stats, dplyr, httr, jsonlite, rvest, tidyr, xml2, lubridate
dipsaus (>= 0.2.0), logger (>= 0.2.2), raveio (>= 0.0.6),
rpymat (>= 0.1.2), shidashi (>= 0.1.1), shiny (>= 1.7.1),
shinyWidgets (>= 0.6.2), threeBrain (>= 0.2.4), shinyvalidate,
htmlwidgets
httr, jsonlite, dplyr, tibble, purrr, tidyr
graphics, stats, filearray (>= 0.1.3), Rcpp (>= 1.0.8),
waveslim (>= 1.8.2), signal (>= 0.7.7), pracma, digest (>=
0.6.29), splines
rvest, dplyr, jsonlite, xml2, stringr, clipr
doParallel, foreach, Rcpp, progress, raster, scales, png,
rayshader, magrittr, jpeg, grDevices
Rcpp, raster, png, magrittr, jpeg, grDevices
Rcpp, png, magrittr, jpeg, grDevices, grid
rayrender, magrittr, PeriodicTable, httr, rayvertex
Rcpp (>= 1.0.0), parallel, assertthat, tibble, magrittr,
purrr, png, raster, decido, rayimage, stats
Rcpp (>= 1.0.0), parallel, assertthat, tibble, magrittr,
purrr, png, raster, decido, rayimage, stats, progress
Rcpp (>= 1.0.0), parallel, tibble, magrittr, purrr, png,
raster, decido, rayimage (>= 0.6.2), stats, progress
Rcpp (>= 1.0.0), parallel, magrittr, purrr, png, raster,
decido, rayimage (>= 0.7.1), stats, progress
Rcpp (>= 1.0.0), parallel, assertthat, tibble, magrittr,
purrr, png, raster
Rcpp (>= 1.0.0), parallel, assertthat, tibble, magrittr,
purrr, png, raster, decido, rayimage
doParallel, foreach, Rcpp, progress, raster, scales, png,
magrittr, rgl, imager, rgdal
doParallel, foreach, Rcpp, progress, raster, scales, png,
magrittr, rgl, imager
doParallel, foreach, Rcpp, progress, raster, scales, png,
magrittr, rgl, imager, grDevices, grid, ggplot2, av
doParallel, foreach, Rcpp, progress, raster, scales, png,
magrittr, rgl, imager, grDevices, ggplot2, grid, utils
doParallel, foreach, Rcpp, progress, raster, scales, png,
magrittr, rgl, imager, grDevices, ggplot2, grid, utils,
rayrender
doParallel, foreach, Rcpp, progress, raster, scales, png,
magrittr, rgl, imager, grDevices, ggplot2, grid, utils,
rayrender, methods
doParallel, foreach, Rcpp, progress, raster, scales, png,
magrittr, rgl, grDevices, ggplot2, grid, utils, rayrender,
methods
doParallel, foreach, Rcpp, progress, raster, scales, png,
magrittr, rgl, grDevices, grid, utils, methods
doParallel, foreach, Rcpp, progress, raster, scales, png,
magrittr, rgl, grDevices, grid, utils, methods, terrainmeshr,
rayimage
doParallel, foreach, Rcpp, progress, raster, scales, jpeg,
png, magrittr, rgl, imager
magrittr, Rcpp (>= 1.0.6), grDevices, rayimage, png, digest
Rcpp (>= 1.0.6), grDevices, rayimage (>= 0.6.2), png, digest
stringr, proto, cli, readr, dplyr, rvest, httr, jsonlite,
purrr, ascii, rlang, methods, yaml, digest
stringr, proto, cli, readr, dplyr, rvest, httr, jsonlite,
purrr, ascii, rlang, methods, yaml, digest, base64enc
bizdays, stringr, proto, cli, readr, dplyr, rvest, httr,
jsonlite, purrr, ascii, rlang, methods, yaml, digest,
base64enc, XML
Rcpp (>= 0.12.12), coda (>= 0.19-1), grDevices, graphics,
stats, utils
coda (>= 0.19-1), graphics, grDevices, Rcpp (>= 0.12.12),
stats, utils
coda (>= 0.19-1), graphics, grDevices, Rcpp (>= 0.12.12),
stats, utils, IntCal (>= 0.1.3)
httr, jsonlite, tibble, xts, xml2, utils
httr, jsonlite, tibble, xts, xml2, utils, stats, methods
httr, jsonlite, tibble, xts, xml2, utils, stats
tibble, R6, stringr, bit64, bitops, rappdirs, rlang, dplyr,
purrr, magrittr, readr, utils, digest, vctrs, tidyr, fs
tibble, R6, stringr, bit64, rappdirs, rlang, dplyr, purrr,
magrittr, readr, utils, digest, vctrs, tidyr, fs
XML, RCurl, rjson, wordcloud, rtematres, RColorBrewer
ggplot2, dplyr, magrittr, tidyr, purrr, lme4, Matrix, forcats,
sf, lubridate, rlang, stringr,
dplyr, geosphere, tibble (>= 1.1), stringr, readr, rlang
dplyr, geosphere, rlang, reproj, sfheaders
methods, utils, stats, httr, XML, jsonlite, plyr
DescTools, dplyr, forcats, ggplot2, glue, graphics, magrittr,
miniUI, purrr, recipes, rlang, rstudioapi, shiny, stats,
tibble, utils
DescTools, dplyr, forcats, ggplot2, graphics, magrittr,
miniUI, recipes, rlang, rstudioapi, shiny, stats, tibble, utils
ggplot2, methods, Rcpp, RcppParallel (>= 5.0.1), rstan (>=
2.18.1), rstantools (>= 2.1.1), testthat, ggmcmc, GGally, loo,
stringr, stats, zoo
ggplot2, methods, Rcpp, rstan (>= 2.18.1), rstantools (>=
2.1.1), ggmcmc, GGally, loo, stringr, stats, zoo
magrittr, methods, plyr, Rcpp, RcppParallel, R.utils, rhdf5,
rjson, slam, openxlsx
magrittr, methods, plyr, Rcpp, RcppParallel, R.utils, rjson,
slam, openxlsx
magrittr, methods, plyr, Rcpp, RcppParallel, rjson, rlang,
R.utils, slam, openxlsx
plyr, httr, mapproj, ggplot2, grid, gridExtra, maptools, sp,
data.table
plyr, httr, mapproj, ggplot2, grid, gridExtra, maptools, sp,
data.table, rjson
plyr, httr, mapproj, ggplot2, grid, gridExtra, maptools, sp,
dplyr, jsonlite, assertthat
plyr, httr, mapproj, ggplot2, grid, gridExtra, maptools, sp,
dplyr, jsonlite
methods, stats, plyr, httr, ggplot2, mapproj, grid, sp, dplyr,
jsonlite
plyr, httr (>= 1.2.0), ggplot2, mapproj, grid, sp, dplyr (>=
0.5.0), jsonlite (>= 1.1)
plyr, crul (>= 0.3.4), ggplot2, mapproj, grid, sp, dplyr (>=
0.5.0), jsonlite (>= 1.1)
plyr, crul (>= 0.3.4), ggplot2, mapproj, grid, sp, dplyr (>=
0.5.0), jsonlite (>= 1.1), data.table
plyr, crul (>= 0.7.4), ggplot2, mapproj, grid, sp, dplyr (>=
0.5.0), jsonlite (>= 1.1), data.table
plyr, crul (>= 0.7.4), ggplot2, mapproj, grid, sp, dplyr (>=
0.5.0), jsonlite (>= 1.1), data.table, tibble
Matrix, methods, Rcpp (>= 0.12.0), RcppParallel (>= 5.0.1),
rstan (>= 2.18.1), rstantools (>= 2.1.1), R6, assertthat,
glmmTMB
mmrm, pkgload, Matrix, methods, Rcpp (>= 0.12.0), RcppParallel
(>= 5.0.1), rstan (>= 2.18.1), rstantools (>= 2.1.1), R6,
assertthat
htmlwidgets (>= 0.5), maps, methods, jsonlite, digest, hexbin,
lazyeval, pryr, magrittr, ggplot2, scales, gistr
htmlwidgets (>= 0.5), maps, methods, jsonlite, digest, hexbin,
lazyeval, pryr, magrittr, scales, gistr
jsonlite (>= 1.5), crul (>= 0.5.0), fauxpas, data.table,
tibble
jsonlite, crul, fauxpas, data.table, tibble
ClustGeo, MASS, fields, ggplot2, methods, pracma, raster,
rgeos, sp, gridExtra, rlang, Matrix, sf, LaplacesDemon
methods, testthat, pracma, stats, utils, Rdpack, spatial, sp,
colorspace, rgdal
methods, testthat, pracma, stats, utils, Rdpack, spatial, lidR
sp,stats,spatstat.geom, spatstat.core, spatstat.linnet,
spatstat (>=
2.0-0),graphics,grDevices,utils,snow,doSNOW,foreach,iterators,knitr
sf,stats,spatstat.geom, spatstat.model,spatstat.explore,
spatstat.linnet, spatstat (>=
2.0-0),graphics,grDevices,utils,snow,doSNOW,foreach,iterators,knitr
methods, Rcpp (>= 0.12.0), RcppParallel (>= 5.0.1), rstan (>=
2.18.1), rstantools (>= 2.1.1), Rdpack, dplyr, rlang, stats,
tibble, tidybayes, magrittr, shiny, shinythemes
redcapAPI, getPass, yaml, keyring (>= 1.3.0)
rJava, rcdklibs (>= 1.5.4), methods, png, iterators
rJava, rcdklibs (>= 1.5.8), methods, png, iterators
rJava, rcdklibs (>= 1.5.13), methods, png, iterators,
itertools
rJava, rcdklibs (>= 1.5.12), methods, png, iterators,
itertools
fingerprint, rJava, methods, png, iterators, itertools
htmlwidgets, V8, R6, ggplot2, plyr, dplyr, assertthat
matlab, aspace, jpeg, dplyr, scales, utils
curl, crul (>= 0.7.0), fauxpas, jsonlite
digest, httr, prettymapr, reshape2, lubridate
digest, httr, prettymapr, reshape2, lubridate, mudata2, dplyr,
stringr, readr, tibble, purrr, tidyr, magrittr, rlang, hms
digest, httr, prettymapr, reshape2, lubridate, mudata2,
dplyr(>= 0.7.0), stringr, readr, tibble, purrr, tidyr(>=
0.7.0), magrittr, rlang
callr, clisymbols, crayon, digest, withr
callr (>= 2.0.0), cli, crayon, desc (>= 1.2.0), digest,
pkgbuild, prettyunits, R6, rprojroot, utils, withr, xopen
callr (>= 2.0.0), cli, crayon, desc (>= 1.2.0), digest,
pkgbuild, prettyunits, R6, rprojroot, sessioninfo (>= 1.1.1),
utils, withr, xopen
callr (>= 3.1.1.9000), cli (>= 1.1.0), crayon, desc (>=
1.2.0), digest, pkgbuild, prettyunits, R6, rprojroot,
sessioninfo (>= 1.1.1), utils, withr, xopen
callr (>= 3.1.1.9000), cli (>= 3.0.0), curl, desc (>= 1.2.0),
digest, pkgbuild, prettyunits, R6, rprojroot, sessioninfo (>=
1.1.1), utils, withr, xopen
crul, tibble, jsonlite, data.table, glue
clisymbols, crayon, devtools, gert, gh, gtools, rmarkdown,
rstudioapi, stringr, usethis, utils, xfun
clisymbols, crayon, devtools, gert, gh, gtools, renv,
rmarkdown, rstudioapi, stringr, usethis, utils, xfun
httr, jsonlite, magrittr, dplyr, tibble, tidyr, utils
httr, jsonlite, magrittr, dplyr, tibble, tidyr
httr, jsonlite, magrittr, dplyr, tibble, tidyr, stringr
crul (>= 0.4.0), jsonlite (>= 1.5), pdftools (>= 1.3), hoardr
jsonlite, digest, magrittr, stats, utils, collectArgs
dplyr, forecast, ggmap, graphics, grDevices, htmltools,
igraph, leaflet, lubridate, KernSmooth, raster, rgdal, sp,
stats
dplyr, ggmap, htmltools, igraph, leaflet, leafsync, lubridate,
KernSmooth, pals, prophet, raster, Rcpp, rgdal, sp, stats
dplyr, forecast, ggmap, htmltools, igraph, leaflet, leafsync,
lubridate, KernSmooth, pals, raster, Rcpp, rgdal, sp, stats
jsonlite, XML, httr, plyr, bibtex, dplyr
jsonlite, XML, httr (>= 0.6.0), plyr, bibtex, dplyr
utils, methods, stats, jsonlite, XML, httr (>= 1.0.0), plyr,
bibtex, dplyr
utils, methods, stats, jsonlite, XML, httr (>= 1.0.0), plyr,
bibtex, dplyr, R6
utils, methods, stats, jsonlite, httr (>= 1.0.0), xml2, plyr,
bibtex, dplyr, R6
utils, methods, stats, jsonlite, httr (>= 1.0.0), xml2, plyr,
bibtex, dplyr (>= 0.5.0), R6
methods, utils, jsonlite (>= 1.0), httr (>= 1.2.0), xml2 (>=
1.0.0), plyr, bibtex, dplyr (>= 0.5.0), R6, shiny, miniUI,
stringr
methods, utils, jsonlite (>= 1.0), httr (>= 1.2.0), xml2 (>=
1.0.0), plyr, bibtex, dplyr (>= 0.5.0), R6, shiny, miniUI,
stringr, rappdirs
methods, utils, jsonlite (>= 1.0), crul (>= 0.3.4), xml2 (>=
1.0.0), plyr, bibtex, dplyr (>= 0.5.0), R6, shiny, miniUI,
stringr
methods, utils, jsonlite (>= 1.5), crul (>= 0.4.0), xml2 (>=
1.1.1), plyr, bibtex, dplyr (>= 0.7.4), R6, shiny, miniUI,
stringr
methods, utils, jsonlite (>= 1.5), crul (>= 0.4.0), xml2 (>=
1.1.1), plyr, bibtex, dplyr (>= 0.7.4), R6, shiny, miniUI,
stringr, DT
methods, utils, jsonlite (>= 1.5), crul (>= 0.7.0), xml2 (>=
1.1.1), plyr, bibtex, dplyr (>= 0.7.4), R6, shiny, miniUI,
stringr, DT, stats
methods, utils, jsonlite (>= 1.5), crul (>= 0.7.4), xml2 (>=
1.1.1), plyr, bibtex, dplyr (>= 0.7.4), R6, shiny, miniUI,
stringr, DT, stats
methods, utils, jsonlite (>= 1.5), crul (>= 0.7.4), xml2 (>=
1.1.1), plyr, dplyr (>= 0.7.4), tibble, R6, shiny, miniUI,
stringr, DT, stats
dplyr, magrittr, purrrlyr, stats, tibble, tidyr
pacman, rms, ggplot2, survminer, segmented, survival, dplyr,
patchwork, Cairo
forcats, dplyr, tibble, tidyr, readr, stringr
Rcpp (>= 1.0.6), futile.logger, base64enc, utils
dplyr, rlang (>= 1.0.0), generics, ggplot2, tibble, tidyr,
dataverse, readr, prediction, broom, purrr, fabricatr,
estimatr, randomizr, DeclareDesign
KernSmooth, ggplot2, rdd, sandwich, lmtest, Formula, locpol,
methods
KernSmooth, ggplot2, rdd, sandwich, lmtest, Formula, locpol,
methods, rdrobust, rmarkdown
R6, rlang (>= 0.4.2), stats, utils, grid
grid, R6, rlang (>= 0.4.2), stats, utils
lubridate, tibble, httr, xml2, dplyr, sp, rgdal
redland, jsonld, methods, utils, stringi, readr
redland, jsonld, methods, utils, stringi, readr, dplyr, tidyr
R6, httr, jsonlite, foreign, magrittr, rappdirs, digest,
storr, xml2, qdapRegex, rgdal, getPass, haven, iotools
brio, R6, httr, jsonlite, foreign, magrittr, rappdirs, digest,
storr, xml2, qdapRegex, rgdal, getPass, haven, iotools
methods, ggplot2, ggthemes, ape, phangorn, plyr, tidyr,
tibble, phytools, reshape2
binaryLogic, methods, reshape2, stats, utils
methods, reshape2, stats, stringdist, utils
brew, grDevices, httr, methods, utils, stats, xml2
brew, grDevices, httr, methods, utils, stats, stringr, xml2
R6, crayon, cli, prettycode, tools, utils
Matrix, urltools, glmnet, stats, methods, RSelenium, XML,
curl, virustotal, aws.alexa
Matrix, urltools, glmnet, stats, methods, RSelenium, XML,
httr, xml2, curl, virustotal, aws.alexa, rlang
Matrix, urltools, glmnet, stats, methods, XML, httr, xml2,
curl, virustotal, aws.alexa, rlang, jsonlite, devtools
Matrix, urltools, glmnet, stats, methods, XML, httr, xml2,
curl, virustotal, aws.alexa, jsonlite, devtools, R.utils
httr (>= 1.2.0), jsonlite (>= 1.0), tibble, data.table
crul (>= 0.3.8), jsonlite (>= 1.0), tibble, data.table, hoardr
assertthat, data.table, dplyr, httr, jsonlite, magrittr
assertive, digest, dplyr, httr, jsonlite, magrittr, purrr
XML, RCurl, OAIHarvester, ape, gdata, plyr, stringr, RJSONIO
XML, RCurl, OAIHarvester, ape, gdata, plyr, stringr,
ReadImages, RJSONIO
crul, curl, tibble, hoardr, zip, jsonlite, mime
curl, digest, ggplot2, grDevices, gtools, jsonlite, knitr,
methods, sessioninfo, tools, utils, XML
curl, digest, ggplot2, grDevices, gtools, jsonlite, knitr,
methods, provSummarizeR, provViz (>= 1.0.6), rmarkdown,
sessioninfo, stringi, tools, utils, XML
curl, digest, ggplot2, grDevices, gtools, jsonlite, knitr,
methods, rmarkdown, sessioninfo, stringi, tools, utils, XML
curl, digest, grDevices, gtools, jsonlite, knitr, methods,
provSummarizeR, provViz (>= 1.0.6), rlang, rmarkdown,
sessioninfo, stringi, tools, utils, XML
curl, digest, grDevices, gtools, jsonlite, knitr, methods,
provViz (>= 1.0.6), rlang, rmarkdown, sessioninfo, stringi,
tools, utils, XML
Rcpp (>= 0.12.2), stringi, RcppParallel, htmlwidgets (>= 0.6),
BB, MASS, SQUAREM, aftgee, survival, methods, nleqslv,
ggplot2, plyr
BB, MASS, SQUAREM, aftgee, survival, methods, nleqslv,
ggplot2, plyr, dplyr, purrr, tidyr
BB, nleqslv, SQUAREM, survival, plyr, ggplot2, purrr, dplyr,
tidyr, MASS, methods, tibble
BB, nleqslv, SQUAREM, survival, ggplot2, MASS, methods, reda
(>= 0.5.0), scam
BB, nleqslv, SQUAREM, survival, ggplot2, MASS, methods, reda
(>= 0.5.0), scam, Rcpp, rootSolve
BB, nleqslv, SQUAREM, survival, directlabels, ggplot2, MASS,
methods, reda (>= 0.5.0), scam, Rcpp, rootSolve
BB, nleqslv, dfoptim, optimx, SQUAREM, survival, directlabels,
ggplot2, MASS, methods, reda (>= 0.5.0), scam, Rcpp, rootSolve
digest, htmltools, htmlwidgets, jsonlite, reactR
dplyr, grDevices, htmltools, shiny, stringr
dplyr, grDevices, htmltools, htmlwidgets, shiny, stringr,
tools
dplyr, grDevices, htmltools, htmlwidgets (>= 1.5.3), magrittr,
purrr, sass (>= 0.4.0), shiny, stats, stringr (>= 1.4.0), tippy
(>= 0.1.0), tools, webshot
xml2 (>= 1.0.0), cellranger, readr, stringi
xml2 (>= 1.3.2), cellranger, readr (>= 1.2.1), stringi, utils
data.table (>= 1.9.6), ggplot2, stats, syllable, tidyr
readxl, dplyr, tidyr, sjmisc, rsdmx, readr, stringr
readxl (>= 1.2.0), tibble (>= 1.4.99), dplyr, XML, purrr,
tidyr, rsdmx, readr
readxl (>= 1.2.0), tibble (>= 1.4.99), dplyr, XML, curl, httr,
purrr, tidyr, rsdmx, readr
readxl (>= 1.2.0), tibble (>= 1.4.99), dplyr (>= 0.8.0), XML,
curl, purrr, tidyr, stringr, rsdmx, readr
readxl (>= 1.2.0), dplyr (>= 0.8.0), hutils (>= 1.5.0), fst,
purrr, tidyr (>= 1.0.0), stringi, tools, glue, httr, rvest,
xml2, rlang
readxl (>= 1.2.0), tibble (>= 1.4.99), dplyr (>= 0.8.0),
hutils (>= 1.5.0), fst, XML, curl, purrr, tidyr, stringr,
stringi, rsdmx, tools, glue, httr, magrittr, rvest, xml2
readxl (>= 1.2.0), tibble (>= 1.4.99), dplyr (>= 0.8.0),
hutils (>= 1.5.0), fst, XML, curl, purrr, tidyr, stringr,
stringi, rsdmx, tools, glue, httr, rvest, xml2
readxl (>= 1.2.0), tibble (>= 1.4.99), dplyr (>= 0.8.0),
hutils (>= 1.5.0), fst, XML, curl, purrr, tidyr, stringr,
stringi, rsdmx, tools
readxl (>= 1.2.0), tibble (>= 1.4.99), dplyr (>= 0.8.0),
hutils (>= 1.5.0), fst, curl, purrr, tidyr (>= 1.0.0), stringr,
stringi, rsdmx, tools, glue, httr, rvest, xml2, rlang
readxl (>= 1.2.0), tibble (>= 1.4.99), dplyr (>= 0.8.0),
hutils (>= 1.5.0), fst, curl, purrr, tidyr, stringr, stringi,
rsdmx, tools, glue, httr, rvest, xml2, rlang
readxl (>= 1.2.0), dplyr (>= 0.8.0), hutils (>= 1.5.0), fst,
curl, purrr, tidyr (>= 1.0.0), stringi, rsdmx, tools, glue,
httr, rvest, xml2, rlang
Rcpp (>= 0.12.0.5), tibble, hms (>= 0.4.1), R6, clipr, crayon,
methods
cli, clipr, crayon, hms (>= 0.4.1), methods, rlang, R6,
tibble, utils, lifecycle
cli, clipr, crayon, hms (>= 0.4.1), methods, rlang, R6,
tibble, vroom (>= 1.5.2), utils, lifecycle (>= 0.2.0)
cli, clipr, crayon, hms (>= 0.4.1), methods, rlang, R6,
tibble, vroom (>= 1.5.4), utils, lifecycle (>= 0.2.0)
cli, clipr, crayon, hms (>= 0.4.1), methods, rlang, R6,
tibble, vroom (>= 1.5.6), utils, lifecycle (>= 0.2.0)
cli (>= 3.0.0), clipr, crayon, hms (>= 0.4.1), lifecycle (>=
0.2.0), methods, R6, rlang, tibble, utils, vroom (>= 1.5.6)
cli (>= 3.2.0), clipr, crayon, hms (>= 0.4.1), lifecycle (>=
0.2.0), methods, R6, rlang, tibble, utils, vroom (>= 1.6.0)
readxl (>= 1.3.0), tidyr (>= 1.0.0), dplyr (>= 1.0.0), purrr,
rlang, xml2, rvest (>= 0.3.6), stringr, httr, lubridate, curl
readxl (>= 1.3.0), tidyr (>= 1.0.0), dplyr (>= 1.0.0), purrr,
rlang, xml2, rvest (>= 0.3.6), stringr, httr, lubridate
stringr, xml2, purrr, dplyr, rlang, stringi, magrittr, stats,
deSolve
stringr, xml2, purrr, dplyr, rlang, stringi, magrittr, stats,
deSolve, parallel
utils, stringi, data.table, httr, antiword, pdftools, tibble,
jsonlite (>= 0.9.10), streamR, XML, readxl, readODS
utils, stringi, data.table, httr, antiword, pdftools, tibble,
jsonlite (>= 0.9.10), streamR, xml2, readxl, readODS, digest
antiword, data.table, digest, httr, jsonlite (>= 0.9.10),
pdftools, readODS, readxl, streamR, stringi, striprtf, tibble,
xml2, utils
antiword, data.table, digest, httr, jsonlite (>= 0.9.10),
pdftools, readODS (>= 1.7.0), readxl, streamR, stringi,
striprtf, tibble, xml2, utils
magrittr, stats, utils, tibble, purrr, readr, stringr, plyr
err, checkr, dttr2, hms, DBI, RSQLite, sf, tibble, units
err, checkr, dttr2, hms (>= 0.5.0), DBI, RSQLite, sf, tibble,
units
chk, hms, DBI, RSQLite, lifecycle, tibble
chk, DBI, hms, lifecycle, RSQLite, tibble, sf, rlang, glue,
crayon
cellranger, Rcpp (>= 0.11.6), tibble (>= 1.1)
cellranger, Rcpp (>= 0.12.12), tibble (>= 1.1)
cellranger, progress, Rcpp (>= 0.12.18), tibble (>= 1.3.1),
utils
cellranger, Rcpp (>= 0.12.18), tibble (>= 1.3.1), utils
ncdf4, methods, sp, rgeos, ggplot2, ggpubr, googleway,
lubridate, maptools, spatstat.geom, geoR, knitr, reshape2,
kableExtra, geosphere, ggspatial, spatstat, parallel, pbapply,
rlang, coda, bayesplot
checkmate (>= 2.0.0), dplyr (>= 0.8.5), lifecycle, plyr, purrr
(>= 0.3.4), rlang (>= 0.4.7), stats, utils
checkmate (>= 2.0.0), dplyr (>= 0.8.5), lifecycle, plyr, purrr
(>= 0.3.4), rlang (>= 0.4.7), stats, tibble, utils
checkmate (>= 2.0.0), dplyr (>= 0.8.5), lifecycle, plyr, purrr
(>= 0.3.4), rlang (>= 0.4.7), R6, stats, tibble, utils
methods, utils, stats, jsonlite, httr, dplyr
methods, utils, stats, httr (>= 1.0.0), jsonlite, dplyr
methods, utils, stats, httr (>= 1.0.0), jsonlite, dplyr,
assertthat
methods, stats, utils, graphics, grDevices, mvtnorm
methods, stats, utils, graphics, grDevices
rebus.base (>= 0.0-2), rebus.datetimes, rebus.numbers,
rebus.unicode (>= 0.0-2)
rebus.base (>= 0.0-3), rebus.datetimes, rebus.numbers,
rebus.unicode (>= 0.0-2)
curl, jsonlite, digest, arrow, dplyr, future.apply, progressr
dplyr (>= 0.4.1), plyr, magrittr (>= 1.5), reshape2 (>=
1.4.1), Rcpp, devtools
tibble, stats, ipred, dimRed (>= 0.1.0), lubridate, timeDate,
ddalpha, purrr, rlang (>= 0.1.1), gower, RcppRoll, tidyselect
(>= 0.1.1), magrittr
tibble, stats, ipred, dimRed (>= 0.1.0), lubridate, timeDate,
ddalpha, purrr, rlang (>= 0.1.1), gower, RcppRoll, tidyselect
(>= 0.1.1), magrittr, Matrix
generics, glue, gower, ipred, lubridate, magrittr, Matrix,
purrr (>= 0.2.3), rlang (>= 0.4.0), stats, tibble, tidyr (>=
0.8.3), tidyselect (>= 0.2.5), timeDate, utils, withr
generics, glue, gower, ipred, lifecycle, lubridate, magrittr,
Matrix, purrr (>= 0.2.3), rlang (>= 0.4.0), stats, tibble,
tidyr (>= 1.0.0), tidyselect (>= 0.2.5), timeDate, utils, withr
generics (>= 0.1.0), glue, gower, ipred, lifecycle, lubridate,
magrittr, Matrix, purrr (>= 0.2.3), rlang (>= 0.4.0), stats,
tibble, tidyr (>= 1.0.0), tidyselect (>= 1.1.0), timeDate,
utils, withr
ellipsis, generics (>= 0.1.0), glue, gower, ipred, lifecycle,
lubridate, magrittr, Matrix, purrr (>= 0.2.3), rlang (>=
0.4.0), stats, tibble, tidyr (>= 1.0.0), tidyselect (>= 1.1.0),
timeDate, utils, withr
ellipsis, generics (>= 0.1.0), glue, gower, ipred (>= 0.9-12),
lifecycle, lubridate, magrittr, Matrix, purrr (>= 0.2.3), rlang
(>= 0.4.0), stats, tibble, tidyr (>= 1.0.0), tidyselect (>=
1.1.0), timeDate, utils, vctrs, withr
tibble, stats, ipred, dimRed (>= 0.1.0), lubridate, timeDate,
ddalpha, purrr (>= 0.2.3), rlang (>= 0.1.1), gower, RcppRoll,
tidyselect (>= 0.1.1), magrittr, Matrix, tidyr, pls
generics, gower, ipred, lubridate, magrittr, Matrix, purrr (>=
0.2.3), RcppRoll, rlang (>= 0.3.0.1), stats, tibble, tidyr,
tidyselect (>= 0.1.1), timeDate, utils, withr
generics, glue, gower, ipred, lubridate, magrittr, Matrix,
purrr (>= 0.2.3), RcppRoll, rlang (>= 0.3.0.1), stats, tibble,
tidyr, tidyselect (>= 0.1.1), timeDate, utils, withr
generics, glue, gower, ipred, lubridate, magrittr, Matrix,
purrr (>= 0.2.3), rlang (>= 0.4.0), stats, tibble, tidyr,
tidyselect (>= 0.2.5), timeDate, utils, withr
ellipsis, generics (>= 0.1.0.9000), glue, gower, hardhat (>=
0.1.6.9001), ipred (>= 0.9-12), lifecycle, lubridate, magrittr,
Matrix, purrr (>= 0.2.3), rlang (>= 0.4.0), stats, tibble,
tidyr (>= 1.0.0), tidyselect (>= 1.1.0), timeDate, utils,
vctrs, withr
cli, ellipsis, generics (>= 0.1.2), glue, gower, hardhat (>=
1.2.0), ipred (>= 0.9-12), lifecycle, lubridate (>= 1.8.0),
magrittr, Matrix, purrr (>= 0.2.3), rlang (>= 1.0.3), stats,
tibble, tidyr (>= 1.0.0), tidyselect (>= 1.1.2), timeDate,
utils, vctrs, withr
cli, ellipsis, generics (>= 0.1.2), glue, gower, hardhat (>=
1.2.0), ipred (>= 0.9-12), lifecycle (>= 1.0.3), lubridate (>=
1.8.0), magrittr, Matrix, purrr (>= 0.2.3), rlang (>= 1.0.3),
stats, tibble, tidyr (>= 1.0.0), tidyselect (>= 1.2.0),
timeDate, utils, vctrs, withr
cli, clock (>= 0.6.1), ellipsis, generics (>= 0.1.2), glue,
gower, hardhat (>= 1.2.0), ipred (>= 0.9-12), lifecycle (>=
1.0.3), lubridate (>= 1.8.0), magrittr, Matrix, purrr (>=
0.2.3), rlang (>= 1.0.3), stats, tibble, tidyr (>= 1.0.0),
tidyselect (>= 1.2.0), timeDate, utils, vctrs (>= 0.5.0), withr
dplyr, stringdist, utils, methods, lpSolve, Rcpp
stringdist, stats, utils, lpSolve, Rcpp, parallel
vegan, picante, phangorn, phytools, cluster, plotrix
XML (>= 3.98-1.11), sjlabelled, stringr, tidyr, haven, dplyr,
magrittr
imager, stats, png, pavo, grDevices, graphics, mgcv,
colorRamps, plotfunctions, abind, raster, plot3D
Rcpp (>= 1.0.1), Matrix (>= 1.3-4), MatrixExtra, float,
RhpcBLASctl, methods
Rcpp (>= 1.0.1), Matrix (>= 1.3-4), MatrixExtra (>= 0.1.6),
float, RhpcBLASctl, methods
methods, utils, stats, irlba, recosystem
methods, utils, stats, irlba, recosystem, matrixStats
stats, dplyr, magrittr, survival, rlang, stats4, survminer
BAT, dismo, geosphere, graphics, grDevices, igraph, maptools,
raster, rgdal, rgeos, rJava, sp, stats, utils
raster, BAT, dismo, geosphere, graphics, grDevices, igraph,
maptools, rgdal, rgeos, rJava, sp, stats, utils
BAT, dismo, geosphere, graphics, grDevices, igraph, jsonlite,
maptools, raster, rgdal, rgeos, rJava, sp, stats, utils
BAT, dismo, geosphere, graphics, grDevices, jsonlite,
maptools, raster, rgdal, rgeos, sp, stats, utils
BAT, dismo, geosphere, graphics, grDevices, jsonlite,
maptools, methods, raster, rgdal, rgeos, sp, stats, utils
BAT, dismo, gdistance, geosphere, graphics, grDevices,
jsonlite, maptools, methods, raster, rgdal, rgeos, sp, stats,
utils
ggplot2, grDevices, methods, plyr, splines, stats, utils
ggplot2, graphics, grDevices, methods, splines2, stats
Rcpp, ggplot2, graphics, grDevices, methods, splines2, stats
Rcpp, ggplot2, graphics, grDevices, methods, splines2 (>=
0.4.3), stats
chron, DBI, Hmisc (>= 3.14-6), httr, stringr
checkmate, chron, DBI, httr, labelVector, lubridate, stringr,
tidyr
checkmate, chron, DBI, httr, labelVector, lubridate, readr,
stringr, tidyr
Rcpp (>= 0.11.0), spdep, sp, coda, parallel, doParallel,
foreach
Rcpp (>= 0.11.0), spdep, sp, sf, coda, parallel, doParallel,
foreach, lwgeom, dplyr, ggplot2, magrittr, readr, servr, sys,
tibble, stringr
Rcpp (>= 0.11.0), rlang, vctrs, tidyselect, stringr, dplyr (>=
1.0.0), sf, doParallel, foreach, servr, sys, coda, ggplot2,
patchwork, readr
Rcpp (>= 0.11.0), rlang, cli (>= 3.1.0), vctrs, tidyselect,
stringr, dplyr (>= 1.0.0), sf, doParallel, foreach, doRNG,
servr, sys, ggplot2, patchwork
sf, Rcpp, cli, foreach, doParallel, magrittr, dplyr, rlang,
geos
sf, Rcpp, cli, foreach, doParallel, magrittr, dplyr, rlang,
geos, wk
DBI, aws.s3, foreach, doParallel, parallel
rgdal, spdep, mvtnorm, coda, MCMCglmm, Rdpack, graphics
tibble, readr, dplyr, stringr, tidyr, rentrez, bold, taxize,
xml2, bioseq, ape, igraph, ggplot2, ggraph, yaml, rlang,
rmarkdown, leaflet
stats, ash, future, future.apply, parallel, graphics,
grDevices
MASS, SemiPar, mgcv, VGAM, VGAMdata, caret, expm, mvtnorm,
sandwich, stats, dplyr
MASS, SemiPar, mgcv, VGAM, VGAMdata, caret, expm, mvtnorm,
sandwich, stats, dplyr, scales
lattice, boot, mgcv (>= 1.7-28), MASS, glmnet, magic, nlme,
wavethresh, Matrix, gamm4, matrixStats, lme4, splines, RLRsim
fda, Matrix, lattice, boot, mgcv (>= 1.8-4), MASS, magic,
nlme, gamm4, lme4, RLRsim, splines, grpreg, ggplot2, stats,
MCMCpack, pbs, methods
fda, Matrix, lattice, boot, mgcv (>= 1.8-12), MASS, magic,
nlme, gamm4, lme4, RLRsim, splines, grpreg, ggplot2, stats,
pbs, methods
fda, Matrix, lattice, boot, mgcv (>= 1.8-23), MASS, magic,
nlme, gamm4, lme4, RLRsim, splines, grpreg, ggplot2, stats,
pbs, methods
lattice, boot, mgcv, fda, MASS, glmnet, magic, nlme,
wavethresh, Matrix, gamm4, matrixStats, lme4, splines, RLRsim
lattice, boot, mgcv (>= 1.7-27), fda, MASS, glmnet, magic,
nlme, wavethresh, Matrix, gamm4, matrixStats, lme4, splines,
RLRsim
ggplot2, shiny (>= 0.11), reshape2, dplyr, gridExtra, refund
ggplot2, shiny (>= 0.11), reshape2, dplyr, gridExtra, lme4,
refund
ggplot2, tidyr, shiny (>= 0.11), reshape2, dplyr, gridExtra,
lme4, plotly, refund
ggplot2, tidyr, shiny (>= 0.11), reshape2, dplyr, gridExtra,
lme4, plotly, refund, registr
config, DT, RColorBrewer, golem, shiny, shinyBS, shinythemes,
processx, htmltools, data.table, stringr, tidyr, pkgload,
rvest, xml2, purrr
e1071, FNN, gbm, modelr, nnet, randomForest, rpart
ggplot2 (>= 1.0.0), stats, nlme, lme4, utils
ggplot2 (>= 1.0.0), stats, nlme, lme4, MASS, utils
dplyr, testthat, magrittr, countrycode, tidyselect, utils,
purrr, rlang, glue, stats, tidyr
dplyr, testthat, magrittr, countrycode, tidyselect, utils,
purrr, rlang, glue, stats, tidyr, readxl, stringr
dplyr, magrittr, countrycode, tidyselect, utils, purrr, rlang,
glue, stats, tidyr, readxl, stringr, assertthat, tibble, here
ggplot2, tidyr, magrittr, dplyr, gridExtra, Rcpp (>= 0.11.5)
tidyr, magrittr, dplyr, pbs, Rcpp (>= 0.11.5), parallel, MASS,
utils, gamm4, lme4, mgcv, purrr, Matrix
Deriv, MASS, Matrix, assertthat, sandwich, survival
vioplot, sm, beanplot, survival, graphics, stats
vioplot, sm, beanplot, survival, graphics, stats, lme4
broom.helpers, data.table, dplyr, forestploter, glue,
parameters, R6, rlang (>= 0.4.11), stats, survival
stats, purrr, dplyr, magrittr, tidyr, usdm, scales,
robustbase, stringr, spatstat, MuMIn, ggplot2, rlang
stats, purrr, dplyr, magrittr, tidyr, usdm, scales,
robustbase, stringr, MuMIn, ggplot2, lspline
formattable, effsize, mefa, plyr, plotrix, sjPlot, sjmisc,
sjlabelled,
checkmate, dplyr, ggplot2, glue, gt, lpdensity, rlang, scales,
tidyr, tidyselect
Rcpp (>= 0.12.8), stats, graphics, xtable, multicool, utils
stats, graphics, xtable, multicool, utils, rvest, stringr,
xml2
stats, graphics, xtable, multicool, utils, rvest, stringr,
xml2, methods
cluster, stats, slam, sets (>= 1.0-16), graphics, grDevices
cluster, stats, slam, sets (>= 1.0-4), graphics, grDevices
cluster, stats, slam, sets (>= 1.0-14), graphics, grDevices
magrittr, tidyr, ggplot2, ggExtra, dplyr, purrr, rlang,
tibble, vctrs, bde
FuzzyNumbers.Ext.2, matrixcalc, Rcpp, RcppNumerical, Rdpack,
Ryacas0, stats
FuzzyNumbers.Ext.2, matrixcalc, Rcpp, Rdpack, Ryacas0, stats
FuzzyNumbers.Ext.2, matrixcalc, methods, Rcpp, Rdpack,
Ryacas0, stats
knitr, rstudioapi, rematch2, utils, stats
JointAI, rjags, coda, foreach, data.table, future, doFuture,
mathjaxr, survival, ggplot2, ordinal, progressr, Matrix,
mcmcse, reshape2
JointAI, rjags, coda, foreach, data.table, future, doFuture,
mathjaxr, survival, ggplot2, ordinal, progressr, Matrix, mcmcse
grDevices, gridExtra, latticeExtra, mapdata, scales, stats,
utils
stats, utils, assertthat (>= 0.1), sodium (>= 0.2)
stats, utils, tools, assertthat (>= 0.1), getPass (>= 0.1-0)
pbdZMQ (>= 0.3-0), getPass (>= 0.1-0), argon2 (>= 0.2-0),
stats, utils, tools, grDevices, graphics, png (>= 0.1-7)
boot, car, dplyr (>= 1.0.4), effectsize, flextable (>= 0.7.1),
ggplot2, ggrepel, ggsignif, lmtest, methods, qqplotr, rlang
methods, rlang, dplyr (>= 1.0.4), flextable (>= 0.7.1),
effectsize, insight (>= 0.18.4), performance (>= 0.10.0)
cli (>= 3.0.0), digest, fs, jsonlite, magick (>= 2.7.1),
pagedown, progress, rmarkdown, withr, xaringan, zip
cli (>= 3.0.0), digest, fs, jsonlite, magick (>= 2.7.1),
pagedown, progress, quarto, rmarkdown, withr, xaringan, zip
config, plyr, dplyr, magrittr, lubridate, rmarkdown, processx,
readr, rstudioapi, pool, openxlsx
config, dplyr, magrittr, lubridate, rmarkdown, processx,
readr, rstudioapi, pool, openxlsx
OutbreakTools, jsonlite, plyr, sp, ggplot2, geojsonio
readxl (>= 1.0.0), PowerTOST (>= 1.3.3), lmerTest, nlme,
pbkrtest, graphics, grDevices
readxl (>= 1.0.0), PowerTOST (>= 1.3.3), lmerTest, nlme,
graphics, grDevices
readxl (>= 1.0.0), PowerTOST (>= 1.5.3), lmerTest, nlme,
pbkrtest, graphics, grDevices
data.table, digest, httr, plyr, R.cache, xlsx
boot, flextable, lme4, lmerTest, methods, officer, xtable
bayestestR (>= 0.9.0), effectsize (>= 0.4.4), insight (>=
0.13.2), parameters (>= 0.13.0), performance (>= 0.7.1), stats,
tools, utils
bayestestR (>= 0.10.0), effectsize (>= 0.4.5), insight (>=
0.14.0), parameters (>= 0.14.0), performance (>= 0.7.2), stats,
tools, utils
bayestestR (>= 0.10.5), effectsize (>= 0.4.5), insight (>=
0.14.1), parameters (>= 0.14.0), performance (>= 0.7.2),
datawizard, stats, tools, utils
bayestestR (>= 0.11.5), effectsize (>= 0.6.0), insight (>=
0.15.0), parameters (>= 0.16.0), performance (>= 0.8.0),
datawizard (>= 0.2.2), stats, tools, utils
bayestestR (>= 0.11.5), effectsize (>= 0.6.0), insight (>=
0.16.0), parameters (>= 0.16.0), performance (>= 0.8.0),
datawizard (>= 0.2.3), stats, tools, utils
bayestestR (>= 0.12.1), effectsize (>= 0.7.0), insight (>=
0.18.2), parameters (>= 0.18.2), performance (>= 0.9.2),
datawizard (>= 0.5.1), stats, tools, utils
aod, cmprsk, geepack, ggplot2, ggpubr, gridExtra, kableExtra,
knitr, MASS, pander, plyr, rlang, scales, survival
survival, xtable, aod, cmprsk, geoR, stringr,
fmtr, stringi, crayon, jpeg, graphics, grDevices
fmtr, stringi, crayon, jpeg, graphics, grDevices, zip, withr
fmtr, stringi, crayon, jpeg, graphics, grDevices, zip, withr,
glue
rprojroot, fs, rmarkdown, utils, checkpoint, yaml, callr
rprojroot, fs, rmarkdown, utils, checkpoint, yaml, callr,
rstudioapi
rprojroot, fs, rmarkdown, utils, checkpoint (>= 1.0.0), yaml,
callr, rstudioapi
rprojroot, fs, rmarkdown, utils, yaml, callr, rstudioapi,
knitr
utils, grDevices, htmltools, jsonlite, base64enc
utils, grDevices, htmltools, jsonlite, pillar, base64enc
utils, grDevices, htmltools, jsonlite, pillar (>= 1.4.0),
base64enc
data.table, dplyr, Rcpp, reshape2, ggplot2, assertthat
data.table, dplyr (>= 0.3), Rcpp, reshape2, ggplot2,
assertthat
callr, clipr (>= 0.3.0), knitr, rmarkdown, tools, utils,
whisker
callr, knitr, rmarkdown, tools, utils, whisker
callr (>= 2.0.0), clipr (>= 0.4.0), rlang, rmarkdown, tools,
utils, whisker, withr
callr (>= 2.0.0), clipr (>= 0.4.0), fs, rlang, rmarkdown,
tools, utils, whisker, withr
callr (>= 2.0.0), clipr (>= 0.4.0), fs, rlang, rmarkdown,
utils, whisker, withr
callr (>= 3.6.0), cli (>= 3.2.0), clipr (>= 0.4.0), fs, glue,
knitr (>= 1.23), lifecycle, rlang (>= 1.0.0), rmarkdown,
rstudioapi, utils, withr (>= 2.3.0)
archivist (>= 2.1.2), data.table (>= 1.10.4), devtools,
digest, fastdigest, git2r (>= 0.18), magrittr, methods, raster,
rgdal, sp
archivist (>= 2.1.2), data.table (>= 1.10.4), devtools,
digest, fastdigest, git2r (>= 0.18), magrittr, methods, raster,
sp
archivist (>= 2.1.2), crayon, data.table (>= 1.10.4),
devtools, digest, fastdigest, git2r (>= 0.18), magrittr,
memoise, methods, raster, Rcpp (>= 0.12.13), RCurl, sp,
versions
archivist (>= 2.1.2), crayon, data.table (>= 1.10.4),
devtools, digest, dplyr, fastdigest, fasterize, gdalUtils,
git2r (>= 0.18), googledrive, httr, magrittr, memoise, methods,
raster, Rcpp (>= 0.12.13), RCurl (>= 1.95-4.8), R.utils, rgdal,
rgeos, quickPlot, sf, sp, tools, utils, versions
archivist (>= 2.1.2), backports, crayon, data.table (>=
1.10.4), digest, dplyr, fastdigest, fasterize, fpCompare,
gdalUtils, git2r (>= 0.18), googledrive, httr, magrittr,
memoise, methods, parallel, quickPlot, R.utils, raster, RCurl
(>= 1.95-4.8), remotes, rgdal, rgeos, rlang, sf, sp, testthat,
tools, utils, versions
archivist (>= 2.1.2), backports, crayon, data.table (>=
1.10.4), devtools, digest, dplyr, fastdigest, fasterize,
gdalUtils, git2r (>= 0.18), googledrive, httr, magrittr,
memoise, methods, raster, Rcpp (>= 0.12.13), RCurl (>=
1.95-4.8), R.utils, rgdal, rgeos, quickPlot, sf, sp, tools,
utils, versions
archivist (>= 2.1.2), backports, crayon, data.table (>=
1.10.4), devtools, digest, dplyr, fastdigest, fasterize,
fpCompare, gdalUtils, git2r (>= 0.18), googledrive, httr,
magrittr, memoise, methods, parallel, quickPlot, R.utils,
raster, Rcpp (>= 0.12.13), RCurl (>= 1.95-4.8), remotes, rgdal,
rgeos, sf, sp, testthat, tibble, tools, utils, versions
archivist (>= 2.1.2), backports, crayon, data.table (>=
1.10.4), digest, dplyr, fastdigest, fasterize, fpCompare,
gdalUtils, git2r (>= 0.18), googledrive, httr, magrittr,
memoise, methods, parallel, quickPlot, R.utils, raster, Rcpp
(>= 0.12.13), RCurl (>= 1.95-4.8), remotes, rgdal, rgeos, sf,
sp, testthat, tools, utils, versions
archivist (>= 2.1.2), backports, crayon, data.table (>=
1.10.4), digest, dplyr, fastdigest, fasterize, fpCompare,
gdalUtils, git2r (>= 0.18), googledrive, httr, magrittr,
memoise, methods, parallel, quickPlot, R.utils, raster, Rcpp
(>= 0.12.13), RCurl (>= 1.95-4.8), remotes, rgdal, rgeos,
rlang, sf, sp, testthat, tools, utils, versions
backports, crayon, data.table (>= 1.10.4), DBI, digest,
fastdigest, fpCompare, gdalUtils, glue, googledrive, httr,
magrittr, memoise, methods, qs, quickPlot, R.utils, raster,
RSQLite, remotes, rgdal, rlang, sf, sp, testthat, tools, utils,
versions
backports, crayon, data.table (>= 1.10.4), DBI, digest,
fastdigest, fpCompare, glue, googledrive, httr, lifecycle,
magrittr, memoise, methods, qs, quickPlot, R.utils, raster,
RSQLite, remotes, rlang, sf, sp, testthat, tools, usethis,
utils, versions
crayon, data.table (>= 1.10.4), DBI, digest, fpCompare, glue,
magrittr, methods, Require, raster, RSQLite, rlang, sp (>=
1.4-2), utils
data.table (>= 1.10.4), DBI, digest, fpCompare, glue,
magrittr, methods, Require, raster, RSQLite, rlang, sp (>=
1.4-2), utils
data.table (>= 1.10.4), DBI, digest, fpCompare, glue, lobstr,
magrittr, methods, Require, raster (>= 3.5-15), RSQLite, rlang,
sp (>= 1.4-2), utils
data.table (>= 1.10.4), DBI, digest, fpCompare, gdalUtilities,
glue, magrittr, methods, Require, raster, RSQLite, rlang, sp
(>= 1.4-2), utils
R6, assertthat, stringi, urltools, tools, brotli, jsonlite,
xml2, webutils, utils
httr, dplyr, data.table, jsonlite, xml2, digest, ncdf
methods, utils, stats, httr, dplyr, data.table, jsonlite,
xml2, digest, ncdf
methods, utils, stats, httr (>= 1.0.0), dplyr, data.table,
jsonlite (>= 0.9.17), xml2, digest, ncdf4
abind, dplyr, ggplot2, httr, methods, ncdf4, parsedate,
plotdap, readr, rerddap (>= 0.6.0), sp, stats,
abind, dplyr, ggplot2, httr, maps, methods, ncdf4, parsedate,
plotdap, readr, rerddap (>= 0.6.0), sf, sp, stats,
abind, dplyr, ggplot2, httr, maps, methods, ncdf4, parsedate,
plotdap (>= 0.0.5), readr, rerddap (>= 0.6.0), sf, sp, stats,
abind, dplyr, ggplot2, httr, maps, methods, ncdf4, parsedate,
plotdap (>= 0.0.5), readr, rerddap (>= 0.6.0), sf, sp, stats,
utils
abind, dplyr, ggplot2, httr, maps, methods, ncdf4, parsedate,
plotdap (>= 0.0.5), readr, rerddap (>= 0.8.0), sf, sp, stats,
utils
parallel, RcppZiggurat, utils, stats, dummies
parallel, RcppZiggurat, utils, stats, dummies, mclust
data.table, dbscan (>= 1.1-3), igraph (>= 1.2.4.1), irlba,
Matrix, methods, parallel, reticulate (>= 1.14)
foreach, iterators, pls, Rcpp (>= 0.11.0)
foreach, iterators, Rcpp (>= 1.0.3), mathjaxr (>= 1.0),
magrittr (>= 1.5.0), lifecycle (>= 0.2.0), data.table (>=
1.9.8)
assertthat, broom, cowplot, data.table, dplyr, ggplot2, glue,
graphics, grDevices, gridExtra, lubridate, magrittr, marelac,
methods, purrr, readxl, roll, segmented, stats, stringr, utils,
xml2
data.table, dplyr, glue, graphics, grDevices, lubridate,
magrittr, marelac, methods, purrr, readxl, roll, segmented,
stats, stringr, utils, xml2
data.table, dplyr, glue, graphics, grDevices, lubridate,
magrittr, marelac, purrr, readxl, roll, segmented, stats,
stringr, utils, xml2
graphics, lubridate, marelac, measurements, methods, seacarb,
stats
birk, graphics, lubridate, marelac, measurements, methods,
seacarb, stats
birk, graphics, lubridate, marelac, measurements (>= 1.1.0),
methods, seacarb (>= 3.1), stats, utils
birk, graphics, lubridate, marelac, measurements (>= 1.1.0),
methods, seacarb (>= 3.1), segmented, stats, utils
birk, graphics, lubridate, marelac, measurements (>= 1.1.0),
methods, minpack.lm, seacarb (>= 3.1), segmented, stats, utils
birk, graphics, lubridate, marelac, measurements (>= 1.1.0),
methods, minpack.lm, seacarb (>= 3.1), segmented (>= 1.0-0),
stats, utils
data.table, parallel, rjson, rsdmx, xml2
utils, rentrez, MonetDBLite (>= 0.6.0), DBI (>= 1.0.0),
downloader, RCurl, cli, crayon, callr (>= 3.0.0), devtools
utils, rentrez, DBI (>= 1.0.0), curl, cli, crayon, stringi,
duckdb, fs, assertthat, ape
XML, RCurl, rjson, S4Vectors (>= 0.7.18), yaml
XML, RCurl, rjson, S4Vectors (>= 0.13.15), yaml
utils, assertthat (>= 0.2.1), magrittr, crayon (>= 1.4.1),
methods
boot, ic.infer, lavaan, MASS, mvtnorm, quadprog
boot, ic.infer, lavaan(>= 0.6-10), MASS, mvtnorm, quadprog
utils, graphics, jsonlite, Rcpp (>= 0.12.7)
utils, graphics, jsonlite, Rcpp (>= 0.12.7), Matrix
graphics, jsonlite, Matrix, methods, rappdirs, Rcpp (>=
0.12.7), utils
Matrix, Rcpp (>= 0.12.7), graphics, jsonlite, methods, png,
rappdirs, utils, withr
Matrix, Rcpp (>= 0.12.7), graphics, here, jsonlite, methods,
png, rappdirs, utils, withr
Matrix, Rcpp (>= 0.12.7), RcppTOML, graphics, here, jsonlite,
methods, png, rappdirs, utils, withr
foreign, RImageJROI, png, ttutils, sp, geometry (>= 0.2-1),
RTriangle (>= 1.6-0.4), rgl, R.matlab
foreign, RImageJROI, png, ttutils, sp, geometry (>= 0.2-1),
RTriangle (>= 1.6-0.9), rgl, R.matlab
foreign, RImageJROI, png, ttutils, sp, geometry (>= 0.4.1),
RTriangle (>= 1.6-0.9), rgl, R.matlab, R6
foreign, RImageJROI, png, ttutils, sp, geometry (>= 0.4.3),
RTriangle (>= 1.6-0.9), rgl, R.matlab, R6
Rcpp (>= 0.12.17), dplyr, ggplot2, magrittr, rlang
vctrs, haven, dplyr (>= 1.0.0), magrittr, stats, tibble,
labelled, methods, rlang, fs, assertthat, tidyselect, pillar,
snakecase, purrr, tidyr, here
vctrs, haven, dplyr (>= 1.0.0), magrittr, stats, tibble,
labelled, methods, rlang, fs, assertthat, tidyselect, pillar,
snakecase, purrr, tidyr, here, glue, stringr, utils
assertthat, dplyr (>= 1.0.0), fs, glue, haven, here, labelled,
magrittr, methods, pillar, purrr, rlang, snakecase, stats,
stringr, tibble, tidyr, tidyselect, utils, vctrs
assertthat, jsonlite, methods, RCurl, XML
assertthat, jsonlite, methods, RCurl, stats, XML
assertthat, jsonlite, methods, RCurl, stats, XML, tibble (>=
1.2)
stats, graphics, methods, spatstat, rust (>= 1.1.0)
stats, graphics, methods, utils, rust (>= 1.1.0), bayesplot
(>= 1.1.0)
stats, graphics, methods, utils, rust (>= 1.2.2), bayesplot
(>= 1.1.0), Rcpp
bayesplot (>= 1.1.0), graphics, methods, Rcpp, rust (>=
1.2.2), stats, utils
bayesplot (>= 1.1.0), graphics, methods, Rcpp, rust (>=
1.2.2), stats, utils, zoo
bayesplot (>= 1.1.0), graphics, Rcpp, rust (>= 1.2.2), stats,
utils
bayesplot (>= 1.1.0), exdex, graphics, Rcpp, rust (>= 1.2.2),
stats, utils
ade4, plotly, shiny, shinycssloaders, shinydashboard,
SnowballC, stringdist, tm, topicmodels, viridisLite, methods,
modeltools
ade4, plotly, shiny, shinydashboard, SnowballC, stringdist,
tm, topicmodels, viridisLite, methods, modeltools
ade4, plotly, shiny, shinydashboard, SnowballC, stringdist,
tm, topicmodels, viridisLite, modeltools
ade4, modeltools, NLP, plotly, shiny, shinydashboard,
SnowballC, stringdist, tm, topicmodels, viridisLite
ade4, modeltools, ngram, plotly, slam, shiny, shinydashboard,
SnowballC, stringdist, tm, topicmodels, viridisLite
brio, callr, cli, desc, dplyr, glue, pkgbuild, pkgload, purrr,
rlang (>= 0.4.10), rprojroot, stringi, tibble, withr
graphics, grDevices, grid, gridExtra, stats
abind, ggplot2, graphics, grDevices, gridExtra, parallel,
reshape2, stats, swfscMisc
abind, ggplot2, graphics, grDevices, gridExtra, stats,
swfscMisc
abind, ggplot2, graphics, grDevices, gridExtra, parallel,
reshape2, stats, swfscMisc (>= 1.1.1)
abind, dplyr, ggplot2, grDevices, gridExtra, magrittr,
parallel, plyr, reshape2, rlang, scales, stats, swfscMisc (>=
1.1.1), tibble, tidyr, utils, viridis
abind, dplyr, ggplot2, grDevices, gridExtra, magrittr,
parallel, plyr, reshape2, rlang, scales, stats, swfscMisc (>=
1.1.1), tibble, tidyr, utils
abind, dplyr, ggplot2, grDevices, gridExtra, magrittr,
parallel, rlang, scales, stats, swfscMisc (>= 1.3), tibble,
tidyr, utils
abind, dplyr, ggplot2, grDevices, gridExtra, magrittr,
parallel, rlang, scales, stats, swfscMisc (>= 1.4), tibble,
tidyr, utils
abind (>= 1.4), dplyr (>= 1.0), ggplot2 (>= 3.3), grDevices,
gridExtra, magrittr (>= 2.0), methods, parallel, randomForest
(>= 4.6), rlang, scales, stats, swfscMisc (>= 1.5), tibble (>=
3.1), tidyr (>= 1.1), utils
abind, dplyr, ggplot2, grDevices, gridExtra, magrittr,
methods, parallel, randomForest, rlang, plyr, scales, stats,
swfscMisc (>= 1.5), tibble, tidyr, utils
data.table, httr, RCurl, bitops, jsonlite, dplyr, purrr,
tidyr, stringr
httr, jsonlite, dplyr, purrr, tidyr, stringr (>= 1.0.0),
tidyselect
httr, jsonlite, dplyr, purrr, tidyr (>= 1.0.0), stringr,
tidyselect
httr, jsonlite, dplyr, purrr, tidyr (>= 1.0.0), stringr,
tidyselect, pbapply
data.table, downloader, dplyr, janitor, lubridate, magrittr,
readr, rlang, stringr, tidyr, tidyselect, timetk
magrittr, fs, purrr, httr, xml2, readr, stringr, tibble, glue,
progress
digest, dplyr, httr, jsonlite, lubridate, magrittr, purrr,
tidyr
RJSONIO, httr (>= 0.3), plyr, yaml, ggplot2, XML
RJSONIO, httr (>= 0.3), httpuv, plyr, yaml, ggplot2, XML
RJSONIO, httr (>= 0.3), httpuv, yaml, ggplot2, XML
dplyr, glue, httr, stringr, lubridate, magrittr, readr,
tibble, curl, xts, TTR, xml2, rvest, data.table, janitor, cli,
PerformanceAnalytics, utils
dplyr (>= 0.4.0), lazyeval, httr (>= 1.0.0), tidyr, methods,
utils
dplyr, purrr, methods, utils, memoise, readr, rlang, magrittr,
stringr
dplyr, purrr, methods, utils, memoise, readr, rlang, magrittr,
stringr, gh
dplyr, purrr, methods, utils, memoise, readr (>= 2.0.0),
rlang, magrittr, stringr, gh, DBI, arkdb (>= 0.0.12), tools,
curl, dbplyr, progress, RSQLite, openssl
dplyr, purrr, methods, utils, memoise, readr, rlang, magrittr,
stringr, gh, DBI, arkdb, rappdirs, curl, dbplyr, progress,
RSQLite
dplyr, purrr, methods, utils, memoise, readr, rlang, magrittr,
stringr, gh, DBI, arkdb, tools, curl, dbplyr, progress, RSQLite
dplyr, purrr, methods, utils, memoise, readr, rlang, magrittr,
stringr, gh, DBI, arkdb (>= 0.0.12), tools, curl, dbplyr,
progress, RSQLite
methods, utils, tools, purrr, progress, memoise, rlang,
magrittr, tibble, readr (>= 2.0.0), stringr, jsonlite, DBI,
dplyr, dbplyr, duckdb, contentid (>= 0.0.15), rstudioapi
httr, data.table, assertthat, ggplot2, rjson
assertthat, dplyr, forcats, ggplot2, grDevices, lubridate,
magrittr, purrr, rlang, shiny, stats, tidyr, RColorBrewer
assertthat, dplyr, forcats, ggplot2, ggthemes, lubridate,
magrittr, purrr, RColorBrewer, rlang, stats, tidyr, utils,
xplorerr
dplyr, ggplot2, ggthemes, lubridate, magrittr, RColorBrewer,
rlang, stats, tibble, tidyr, utils, xplorerr
stats, utils, methods, httr, PKI, jsonlite, XML
ggplot2, lubridate, plyr, httr, reshape2, gridExtra, scales,
data.table
XML, RCurl (>= 1.6), plyr, ggplot2, maps
XML, RCurl (>= 1.6), plyr, ggplot2, maps, httr, maptools,
rgdal
XML, RCurl (>= 1.6), plyr, ggplot2, maps, httr, maptools,
rgdal, RJSONIO
XML, RCurl (>= 1.6), plyr, ggplot2, maps, httr, maptools,
rgdal, RJSONIO, data.table, stringr, assertthat, rjson
XML, RCurl (>= 1.6), plyr, ggplot2, maps, httr, maptools,
rgdal, rgeos, RJSONIO, data.table, stringr, assertthat
XML, RCurl (>= 1.6), plyr, ggplot2, maps, httr, maptools,
rgdal, rgeos, sp, RJSONIO, data.table, stringr, assertthat,
whisker
XML, plyr, ggplot2, maps, httr, rgeos, sp, data.table,
stringr, assertthat, whisker, magrittr, jsonlite (>= 0.9.12)
XML, plyr, ggplot2, maps, httr, rgeos, sp, data.table,
stringr, whisker, magrittr, jsonlite (>= 0.9.12)
XML, ggplot2, httr, data.table, whisker, magrittr, jsonlite
(>= 0.9.12), V8
methods, utils, stats, XML, ggplot2, httr (>= 1.0.0),
data.table, whisker, magrittr, jsonlite (>= 0.9.16), V8
methods, utils, stats, XML, ggplot2, httr (>= 1.0.0),
data.table, whisker, magrittr, jsonlite (>= 0.9.16), V8, oai
methods, utils, stats, xml2, ggplot2, httr (>= 1.0.0),
data.table, whisker, magrittr, jsonlite (>= 0.9.16), V8, oai
methods, utils, stats, xml2, ggplot2, httr (>= 1.0.0),
data.table, whisker, magrittr, jsonlite (>= 0.9.16), V8, oai,
geoaxe
utils, stats, xml2, ggplot2, httr (>= 1.0.0), data.table,
whisker, magrittr, jsonlite (>= 0.9.16), V8, oai, geoaxe,
tibble
utils, stats, xml2, ggplot2, httr (>= 1.0.0), data.table,
whisker, magrittr, jsonlite (>= 0.9.16), V8, oai (>= 0.2.2),
geoaxe, tibble
xml2, ggplot2, crul (>= 0.3.4), data.table, whisker, magrittr,
jsonlite (>= 0.9.16), oai (>= 0.2.2), geoaxe, tibble, wicket
(>= 0.2.0)
xml2, ggplot2, crul (>= 0.3.4), data.table, whisker, magrittr,
jsonlite (>= 0.9.16), oai (>= 0.2.2), geoaxe, tibble, wicket
(>= 0.2.0), lazyeval
xml2, ggplot2, crul (>= 0.7.4), data.table, whisker, magrittr,
jsonlite (>= 1.6), oai (>= 0.2.2), geoaxe, tibble, wicket (>=
0.4.0), lazyeval
xml2, ggplot2, crul (>= 0.7.4), data.table, whisker, magrittr,
jsonlite (>= 1.6), oai (>= 0.2.2), geoaxe, tibble, wicket (>=
0.4.0), lazyeval, R6
xml2, ggplot2, crul (>= 0.7.4), data.table, whisker, magrittr,
jsonlite (>= 1.6), oai (>= 0.2.2), geoaxe, tibble, wicket (>=
0.4.0), lazyeval, R6, conditionz
xml2, ggplot2, crul (>= 0.7.4), data.table, whisker, magrittr,
jsonlite (>= 1.6), oai (>= 0.2.2), tibble, wellknown (>=
0.7.2), lazyeval, R6, conditionz
xml2, ggplot2, crul (>= 0.7.4), data.table, whisker, magrittr,
jsonlite (>= 1.6), oai (>= 0.2.2), tibble, wellknown (>=
0.7.2), lazyeval, R6, conditionz, stats
xml2, ggplot2, crul (>= 0.7.4), data.table, whisker, magrittr,
jsonlite (>= 1.6), oai (>= 0.2.2), tibble, lazyeval, R6,
conditionz, stats, wk
methods, reticulate (>= 1.15), magrittr, processx, crayon, cli
methods, reticulate (>= 1.15), leaflet (>= 2.0.2), magrittr,
jsonlite, processx, leafem, crayon, R6, cli
methods, reticulate (>= 1.22), rstudioapi (>= 0.7), leaflet
(>= 2.0.2), magrittr, jsonlite, processx, leafem, crayon, R6,
cli
methods, reticulate (>= 1.24), rstudioapi (>= 0.7), leaflet
(>= 2.0.2), magrittr, jsonlite, processx, leafem, crayon, R6,
cli
dplyr, purrr, stringr, httr, rvest, foreach, tibble, parallel,
doParallel
cli, purrr, R6, Rdpack, reticulate, rlang
aspace, geosphere, grDevices, leaflet, pals, RANN.L1, raster,
sp, splancs, utils
aspace, geosphere, grDevices, leaflet, pals, RANN, raster, sp,
splancs, utils
aspace, geosphere, grDevices, leaflet, pals, RANN, raster, sp,
spatstat, splancs, utils
aspace, geosphere, grDevices, leaflet, pals, RANN, raster, sp,
spatstat.geom, splancs, utils
geosphere, grDevices, leaflet, pals, RANN, raster, sp,
spatstat.geom, splancs, utils
methods, sp (>= 1.1-0), utils, stats, graphics
httr, curl, xml2, memoise, readr, magrittr, dplyr, tidyr,
lazyeval
httr, curl, jsonlite, memoise, readr, magrittr, dplyr, tidyr,
lazyeval, tibble
curl, dplyr, httr, jsonlite, lazyeval, magrittr, memoise,
readr, tibble, tidyr
curl, dplyr, httr, jsonlite, lazyeval, magrittr, memoise,
readr, tibble, tidyr, rlang
graphics, grDevices, stats, utils, htmlwidgets, htmltools,
knitr, jsonlite (>= 0.9.20), shiny, magrittr, crosstalk,
manipulateWidget (>= 0.9.0)
graphics, grDevices, stats, utils, htmlwidgets, htmltools,
knitr, jsonlite (>= 0.9.20), shiny, magrittr, crosstalk,
manipulateWidget (>= 0.9.0), mathjaxr
graphics, grDevices, stats, utils, htmlwidgets, htmltools,
knitr (>= 1.33), jsonlite (>= 0.9.20), magrittr, crosstalk
graphics, grDevices, stats, utils, htmlwidgets, htmltools,
knitr (>= 1.33), jsonlite (>= 0.9.20), magrittr, R6
graphics, grDevices, stats, utils, htmlwidgets, htmltools,
knitr (>= 1.33), jsonlite (>= 0.9.20), magrittr, R6, base64enc,
mime
graphics, grDevices, stats, utils, htmlwidgets, htmltools,
knitr, jsonlite (>= 0.9.20), shiny, magrittr
graphics, grDevices, stats, utils, htmlwidgets, htmltools,
knitr, jsonlite (>= 0.9.20), shiny, magrittr, crosstalk
jsonlite, rgl (>= 0.108.43), grDevices, R6, base64enc
htmlwidgets, htmltools, knitr, jsonlite, shiny, rgl (>=
0.95.1367)
htmlwidgets, htmltools, knitr, jsonlite, shiny, magrittr, rgl
(>= 0.95.1367)
gargle, httr, stringr, rlang, dplyr (>= 1.0.0), tidyr (>=
1.0.0), jsonlite, snakecase, cli (>= 2.5.0.9000), pbapply,
purrr, withr, rlist
gargle (>= 1.2.0), httr, stringr, rlang, dplyr (>= 1.0.0),
tidyr (>= 1.0.0), jsonlite, snakecase, cli (>= 3.0.0), pbapply,
purrr, withr, rlist, rvest (>= 1.0.0)
gargle (>= 1.2.0), httr, stringr, rlang, dplyr (>= 1.0.0),
tidyr (>= 1.0.0), jsonlite, snakecase, cli (>= 3.0.0), pbapply,
purrr, withr, rlist, rvest (>= 1.0.0), magrittr
gargle (>= 1.2.0), httr, stringr, rlang, dplyr (>= 1.0.0),
tidyr (>= 1.0.0), jsonlite, snakecase, cli (>= 3.0.0), pbapply,
purrr, withr, rlist, rvest (>= 1.0.0), magrittr, memoise,
cachem, rappdirs
gargle (>= 1.2.0), httr, stringr, rlang, dplyr (>= 1.0.0),
tidyr (>= 1.0.0), jsonlite, snakecase, cli (>= 3.0.0), pbapply,
purrr, withr, rlist, rvest (>= 1.0.0), memoise, cachem,
rappdirs
httr (>= 1.1.0), jsonlite, assertthat, R6
jsonlite, htmlwidgets (>= 0.3.3), magrittr
jsonlite, htmlwidgets (>= 0.3.3), magrittr, methods
jsonlite, htmlwidgets (>= 0.3.3), magrittr, methods, utils
fields, grDevices, graphics, igraph, stats, tcR
fields, grDevices, graphics, igraph, stats
htmltools (>= 0.5.0), shiny (>= 1.5.0), stringr
htmltools (>= 0.5.2), shiny (>= 1.5.0), stringr
htmltools (>= 0.5.3), shiny (>= 1.5.0), stringr
ape, dplyr, purrr, utils, ggplot2, LambertW
ape, purrr, utils, ggplot2, LambertW, matrixStats
ape, purrr, utils, ggplot2, gmp, matrixStats
ape, purrr, utils, ggplot2, matrixStats, patchwork
ape, purrr, utils, ggplot2, matrixStats, patchwork, methods
box, cli, fs, glue, lintr (>= 2.0.0), logger, purrr, renv,
sass, shiny, styler, testthat (>= 3.0.0), utils, withr, yaml
box, cli, config, fs, glue, lintr (>= 2.0.0), logger, purrr,
renv, rstudioapi, sass, shiny, styler, testthat (>= 3.0.0),
utils, withr, yaml
box, cli, config, fs, glue, lintr (>= 3.0.0), logger, purrr,
renv, rstudioapi, sass, shiny, styler, testthat (>= 3.0.0),
utils, withr, yaml
assertthat, callr, clisymbols, crayon, desc, httr, jsonlite,
parsedate, prettyunits, R6, rappdirs, rcmdcheck (>= 1.2.1),
rematch, utils, whoami, withr
assertthat, callr, cli, crayon, desc, digest, httr, jsonlite,
parsedate, pillar, prettyunits, processx, R6, rappdirs,
rcmdcheck (>= 1.2.1), rematch, tibble, utils, uuid, whoami,
withr
assertthat, callr, cli (>= 1.1.0), crayon, desc, digest, httr,
jsonlite, parsedate, pillar, prettyunits, processx, R6,
rappdirs, rcmdcheck (>= 1.2.1), rematch, tibble, utils, uuid,
whoami, withr
MASS, MCMCpack, msm, dbarts, magrittr, foreach, doParallel,
dplyr, BART, stringr, tidyr, survival, cowplot, ggplot2, twang,
nnet
MASS, MCMCpack, msm, dbarts, magrittr, foreach, doParallel,
dplyr, BART, stringr, tidyr, survival, cowplot, ggplot2, twang,
nnet, RISCA, RRF, randomForest
MASS, MCMCpack, msm, dbarts, magrittr, foreach, doParallel,
dplyr, BART, stringr, tidyr, survival, cowplot, ggplot2, twang,
nnet, RRF, randomForest
data.table, curl, assertthat, fst, readr, jsonlite, methods,
stats, prt (>= 0.1.2), tibble, backports, rlang, vctrs, cli,
glue, fansi, utils
data.table, curl, assertthat, fst, readr, jsonlite, methods,
stats, prt (>= 0.1.2), tibble, backports, rlang, vctrs, cli (>=
2.1.0), glue, fansi, openssl, utils
data.table, curl, assertthat, fst, readr, jsonlite, methods,
stats, prt (>= 0.1.2), tibble, backports, rlang, vctrs, cli (>=
2.1.0), fansi, openssl, utils
httr2, jsonlite (>= 0.9.19), lubridate (>= 1.5.6), magrittr,
purrr, rlang, tibble
jsonlite, crul (>= 0.3.0), data.table, tibble
jsonlite, crul (>= 0.3.4), data.table, tibble
imager, utils, crayon, grDevices, jsonlite, curl
imager, utils, crayon, grDevices, jsonlite
methods, Rcpp, R6, knitr, stringr, digest
methods, Rcpp, R6, knitr, rmarkdown, stringr, GlobalOptions
httr, curl, plyr, jsonlite, ggplot2, maps, sp
tools, utils, foreign, haven, openxlsx, readODS, jsonlite,
XML, curl, data.table, readxl
tools, stats, utils, urltools, foreign, haven, openxlsx,
readODS, jsonlite, XML, curl (>= 0.6), data.table (>= 1.9.5),
readxl, yaml
tools, stats, utils, urltools, foreign, haven, openxlsx,
readODS, jsonlite, xml2, curl (>= 0.6), data.table (>= 1.9.5),
readxl, readr, yaml
tools, stats, utils, urltools, foreign, haven, openxlsx,
readODS, jsonlite, xml2, curl (>= 0.6), data.table (>= 1.9.5),
readxl, readr, yaml, csvy
tools, stats, utils, urltools, foreign, haven (> 0.2.1),
openxlsx, readODS, jsonlite, xml2 (>= 1.0.0), curl (>= 0.6),
data.table (>= 1.9.5), readxl, readr, yaml, csvy
tools, stats, utils, urltools, foreign, haven, openxlsx,
readODS, jsonlite, xml2, curl (>= 0.6), data.table (>= 1.9.5),
readxl, readr, yaml, feather
tools, stats, utils, foreign, haven (> 0.2.1), curl (>= 0.6),
data.table (>= 1.9.8), readxl (>= 0.1.1), openxlsx, tibble
tools, stats, utils, foreign, haven (>= 1.1.0), curl (>= 0.6),
data.table (>= 1.9.8), readxl (>= 0.1.1), openxlsx, tibble
tools, stats, utils, foreign, haven (>= 1.1.2), curl (>= 0.6),
data.table (>= 1.9.8), readxl (>= 0.1.1), openxlsx, tibble
vegan, mgcv, grDevices, sjmisc, stringr, dplyr, methods,
forcats
boot, dplyr, ggplot2, gridExtra, magrittr, purrr, stats,
rlang, tidyr, tidyselect, tidyverse
boot, dplyr, ggplot2, gridExtra, magrittr, MASS, purrr, rlang,
stats, tidyr, tidyselect
boot, dplyr, ggplot2, ggpubr, magrittr, MASS, methods, purrr,
rlang, stats, tidyr, tidyselect
stats, graphics, survival (>= 2.40.1), lava (>= 1.4.7),
cmprsk, doParallel, foreach, parallel, Rcpp, rms (>= 5.0-0)
abind, stats, graphics, survival (>= 2.40.1), lava (>= 1.4.7),
cmprsk, doParallel, foreach, parallel, Rcpp, rms (>= 5.0-0)
abind, doParallel, stats, graphics, survival (>= 2.40.1), lava
(>= 1.4.7), cmprsk, plotrix, timereg (>= 1.9.1), foreach,
parallel, Rcpp, rms (>= 5.0-0)
abind, doParallel, stats, graphics, survival (>= 2.40.1), lava
(>= 1.4.7), cmprsk, plotrix, timereg (>= 1.9.1), foreach,
ranger, parallel, Rcpp, rms (>= 5.0-0)
data.table (>= 1.12.2), ggplot2 (>= 3.1.0), prodlim (>=
2018.4.18), doParallel, stats, graphics, survival (>= 2.44.1),
lava (>= 1.6.5), cmprsk, plotrix, timereg (>= 1.9.3), foreach,
ranger, parallel, Rcpp, lattice, rms (>= 5.1.3)
data.table (>= 1.12.2), ggplot2 (>= 3.1.0), prodlim (>=
2018.4.18), doParallel, stats, graphics, survival (>= 2.44.1),
lava (>= 1.6.5), cmprsk, plotrix, timereg (>= 1.9.3), foreach,
ranger, parallel, Rcpp, lattice, Publish, rms (>= 5.1.3)
cmprsk, data.table (>= 1.12.2), doParallel, foreach, ggplot2
(>= 3.1.0), graphics, lattice, lava (>= 1.6.5), mets, mvtnorm,
parallel, plotrix, prodlim (>= 2018.4.18), Publish, ranger,
Rcpp, rms (>= 5.1.3), stats, survival (>= 2.44.1), timereg (>=
1.9.3)
backports, utils, tools, xml2, httr, curl, urltools, memoise,
BiocManager, cranlogs, covr, vctrs, pillar, tibble, devtools
backports, utils, tools, xml2, httr, curl, urltools, memoise,
BiocManager, cranlogs, covr, vctrs, pillar, tibble, pkgload,
devtools
tcltk, tcltk2, RCurl, tools, knitr, markdown
solrium (>= 1.1.4), crul (>= 0.9.0), jsonlite, data.table,
tibble
doParallel, dplyr, foreach, igraph, magrittr, markdown,
parallel, rlang, stats, tidyr, tidyselect, dodgr, reshape2
plotrix, utils, graphics, stats, XLConnect
distill, stringr, cranlogs, purrr, hunspell, fs, cli, glue,
whisker, xfun, callr, rlang, yaml, yesno, utils, tinytex,
bookdown
Rcpp (>= 1.0.1), RhpcBLASctl, openssl (>= 1.3), stringr (>=
1.4.0)
httpuv, jsonlite, stringr, hwriter, jrc(>= 0.2.0), plyr,
methods, stats
jsonlite, stringr, hwriter, jrc(>= 0.2.0), plyr, stats, R6
jsonlite, stringr, hwriter, jrc(>= 0.4.0), plyr, stats, R6
knitr (>= 1.5), sp, raster, methods, grDevices, graphics,
utils
ggplot2, elliptic, stabledist, reshape2, plyr, Rdpack
ggplot2, stabledist, reshape2, plyr, Rdpack
ggplot2, stabledist, reshape2, plyr, Rdpack, Rcpp
Rcpp (>= 0.12.10), plyr, FNN, dplyr, grid, ggrepel, irlba,
ica, Rtsne, ggplot2, riverplot, Hmisc, foreach, parallel,
doParallel, mclust, stats, psych, RANN, uwot, rlang, utils,
hdf5r
Rcpp (>= 0.12.10), plyr, FNN, dplyr, grid, ggrepel, irlba,
ica, Rtsne, ggplot2, riverplot, foreach, parallel, doParallel,
mclust, stats, psych, RANN, uwot, rlang, utils, hdf5r
MASS, quantreg, nlme, mgcv, stringr, magic
MASS, quantreg, nlme, mgcv, stringr, magic, robustbase
MASS, quantreg, nlme, mgcv, stringr, magic, robustbase, Rcpp
(>= 0.11.1)
MASS, quantreg, nlme, mgcv, stringr, magic, robustbase, Rcpp,
stats, utils, graphics
methods, Rcpp (>= 0.12.0), RcppParallel, rstan (>= 2.18.1),
rstantools (>= 2.1.1), stats
AUC (>= 0.3.0), Biobase, DESeq2, edgeR (>= 3.16.5), graphics,
limma (>= 3.30.13), MASS (>= 7.3-45), Matrix (>= 1.2-8),
methods, nlme (>= 3.1-131), parallel, reshape (>= 0.8.6),
rlang, splines, splineTimeR, statmod (>= 1.4.29), stats
metafor, abind, stats, graphics, grDevices
tools, pryr, assertthat, rmarkdown, visNetwork
httr (>= 1.3.1), igraph, jsonlite (>= 1.5), memoise, purrr
httr (>= 1.3.1), igraph, jsonlite (>= 1.5), memoise, methods,
purrr
httr (>= 1.3.1), igraph (>= 1.2.1), jsonlite (>= 1.5),
memoise, methods
tibble, httr, jsonlite, maps, dplyr, assertthat, geojsonio,
tidyr, purrr, sp, rgdal, digest, maptools, sf
tibble, httr, jsonlite, maps, dplyr, assertthat, geojsonio,
tidyr, purrr, sp, rgdal, digest, maptools, sf (>= 0.6-2)
tibble, httr, jsonlite, maps, dplyr, assertthat, geojsonio,
tidyr, purrr, sp, rgdal, digest, maptools, sf (>= 0.6-2), utils
tibble, httr, jsonlite, maps, dplyr, assertthat, geojsonio,
tidyr, purrr, sp, rgdal, digest, maptools, sf (>= 1.0.0), utils
tools, utils, knitr (>= 1.6), yaml (>= 2.1.5), htmltools (>=
0.2.4), caTools
tools, utils, grDevices, knitr (>= 1.11), yaml (>= 2.1.5),
htmltools (>= 0.2.4), caTools
tools, utils, grDevices, knitr (>= 1.12), yaml (>= 2.1.5),
htmltools (>= 0.2.4), caTools
tools, utils, grDevices, knitr (>= 1.13), yaml (>= 2.1.5),
htmltools (>= 0.2.4), caTools, evaluate, base64enc, jsonlite
tools, utils, grDevices, knitr (>= 1.14), yaml (>= 2.1.5),
htmltools (>= 0.2.4), caTools, evaluate (>= 0.8), base64enc,
jsonlite, tibble
tools, utils, knitr (>= 1.18), yaml (>= 2.1.5), htmltools (>=
0.3.5), evaluate (>= 0.8), base64enc, jsonlite, rprojroot,
mime, tinytex (>= 0.3), methods, stringr (>= 1.2.0)
tools, utils, knitr (>= 1.18), yaml (>= 2.1.19), htmltools (>=
0.3.5), evaluate (>= 0.8), base64enc, jsonlite, mime, tinytex
(>= 0.3), methods, stringr (>= 1.2.0)
tools, utils, knitr (>= 1.22), yaml (>= 2.1.19), htmltools (>=
0.3.5), evaluate (>= 0.13), base64enc, jsonlite, mime, tinytex
(>= 0.11), methods, stringr (>= 1.2.0)
tools, utils, knitr (>= 1.22), yaml (>= 2.1.19), htmltools (>=
0.3.5), evaluate (>= 0.13), base64enc, jsonlite, mime, tinytex
(>= 0.11), xfun, methods, stringr (>= 1.2.0)
tools, utils, grDevices, knitr (>= 1.14), yaml (>= 2.1.5),
htmltools (>= 0.3.5), caTools, evaluate (>= 0.8), base64enc,
jsonlite, rprojroot, methods
tools, utils, knitr (>= 1.14), yaml (>= 2.1.5), htmltools (>=
0.3.5), caTools, evaluate (>= 0.8), base64enc, jsonlite,
rprojroot, methods
tools, utils, knitr (>= 1.14), yaml (>= 2.1.5), htmltools (>=
0.3.5), caTools, evaluate (>= 0.8), base64enc, jsonlite,
rprojroot, methods, stringr (>= 1.2.0)
tools, utils, knitr (>= 1.14), yaml (>= 2.1.5), htmltools (>=
0.3.5), evaluate (>= 0.8), base64enc, jsonlite, rprojroot,
mime, methods, stringr (>= 1.2.0)
tools, utils, knitr (>= 1.22), yaml (>= 2.1.19), htmltools (>=
0.3.5), evaluate (>= 0.13), jsonlite, tinytex (>= 0.31), xfun
(>= 0.21), jquerylib, methods, stringr (>= 1.2.0)
bslib (>= 0.2.5.1), evaluate (>= 0.13), htmltools (>= 0.3.5),
jquerylib, jsonlite, knitr (>= 1.22), methods, stringr (>=
1.2.0), tinytex (>= 0.31), tools, utils, xfun (>= 0.21), yaml
(>= 2.1.19)
bslib (>= 0.2.5.1), evaluate (>= 0.13), htmltools (>= 0.3.5),
jquerylib, jsonlite, knitr (>= 1.22), methods, stringr (>=
1.2.0), tinytex (>= 0.31), tools, utils, xfun (>= 0.30), yaml
(>= 2.1.19)
bslib (>= 0.2.5.1), evaluate (>= 0.13), htmltools (>= 0.5.1),
jquerylib, jsonlite, knitr (>= 1.22), methods, stringr (>=
1.2.0), tinytex (>= 0.31), tools, utils, xfun (>= 0.30), yaml
(>= 2.1.19)
tools, utils, knitr (>= 1.22), yaml (>= 2.1.19), htmltools (>=
0.3.5), evaluate (>= 0.13), jsonlite, mime, tinytex (>= 0.11),
xfun, methods, stringr (>= 1.2.0)
yaml, ggplot2, reshape2, dplyr, igraph (>= 1.0.1)
yaml, ggplot2, gridExtra, reshape2, dplyr, stringi, igraph,
data.table (>= 1.0.1)
stats, grDevices, graphics, pwr, psych, RColorBrewer, mnormt
stats, grDevices, graphics, psych, RColorBrewer
rmarkdown, knitr, bookdown, blogdown, rticles, tinytex,
xaringan, citr, mindr, bookdownplus, magrittr, crayon, utils,
rstudioapi, purrr, tibble, tools, cli, dplyr, grDevices
blogdown, bookdown, bookdownplus, citr, cli, crayon, curl,
devtools, dplyr, DT (>= 0.1), grDevices, magrittr, mindr,
miniUI (>= 0.1), pagedown, purrr, rappdirs (>= 0.3.1),
rmarkdown, rstudioapi, rticles, rvest (>= 0.3.1), shiny (>=
0.13.2), shinyjs (>= 0.6), tibble, tinytex, tools, utils,
xaringan, xml2 (>= 0.1.2)
rstan (>= 2.18.2), rstantools (>= 1.5.1), dplyr (>= 0.7.8),
tidyselect, parallel, stringr, purrr, tibble, tidyr, rlang,
utils, stats, tmvtnorm
rstan (>= 2.18.2), rstantools (>= 1.5.1), dplyr (>= 0.7.8),
tidyselect, parallel, stringr, purrr, tibble, tidyr, rlang,
utils, stats, tmvtnorm, Formula
rstan (>= 2.21.2), rstantools (>= 2.1.1), RcppParallel (>=
5.0.1), dplyr (>= 0.7.8), tidyselect, stringr, purrr, tibble,
tidyr, utils, stats, Formula
rstan (>= 2.21.0), rstantools (>= 2.1.1), RcppParallel (>=
5.0.1), dplyr (>= 0.7.8), purrr, tibble, tidyr, utils, stats,
Formula
assertthat (>= 0.2.1), utils, rmarkdown (>= 1.12)
knitr, rmarkdown, bookdown, htmltools, questionr
Rsolnp, MASS, parallel, Matrix, zoo, xts, Bessel, ff, fftw,
shape, Kendall, spd
Rsolnp, MASS, parallel, Matrix, zoo, xts, Bessel, ff, fftw,
shape, pcaPP, spd, Rcpp
Rsolnp, MASS, parallel, Matrix, zoo, xts, Bessel, ff, shape,
pcaPP, spd, Rcpp
Rsolnp, MASS, Matrix, zoo, xts, Bessel, ff, shape, pcaPP, spd,
Rcpp, utils, graphics, stats, grDevices
Rsolnp, MASS, Matrix, zoo, xts, Bessel, ff, shape, pcaPP, spd,
Rcpp, utils, graphics, stats, grDevices, corpcor
nnet, kknn, kernlab, rpart, plotrix, lattice, methods
methods, plotrix, lattice, nnet, pls, MASS, mda, rpart,
randomForest, adabag, party, Cubist, kernlab, e1071
methods, plotrix, lattice, nnet, kknn, pls, MASS, mda, rpart,
randomForest, adabag, party, Cubist, kernlab, e1071, glmnet,
xgboost
igraph, uuid, methods, magrittr, glue, pryr
igraph, methods, magrittr, glue, pryr, digest
stats, utils, ecr, rgl, graphics, methods, grDevices
stats, utils, ecr, graphics, methods, grDevices, ggplot2,
reshape2, dplyr, cdata, plotly
stats, utils, graphics, methods, GA, grDevices, ggplot2,
plotly
quantreg, nlme, rpart, polspline, multcomp
methods, quantreg, nlme, rpart, polspline, multcomp
methods, quantreg, nlme (>= 3.1-123), rpart, polspline,
multcomp
methods, quantreg, nlme (>= 3.1-123), rpart, polspline,
multcomp, htmlTable, htmltools
methods, quantreg, rpart, nlme (>= 3.1-123), polspline,
multcomp, htmlTable, htmltools
methods, quantreg, rpart, nlme (>= 3.1-123), polspline,
multcomp, htmlTable (>= 1.11.0), htmltools
methods, quantreg, rpart, nlme (>= 3.1-123), polspline,
multcomp, htmlTable (>= 1.11.0), htmltools, MASS, cluster,
digest
methods, Rcpp (>= 0.12.0), RcppParallel (>= 5.0.1), rstan (>=
2.18.1), rstantools (>= 2.1.1), Hmisc (>= 4.3-0), survival (>=
3.1-12), ggplot2, MASS, cluster, digest, knitr, loo
tidyverse, zoo, utils, xts, magrittr, purrr, readr
xts, tbl2xts, zoo, utils, magrittr, purrr,
PerformanceAnalytics, dplyr, readr
utils, readr, purrr, magrittr, dplyr, tbl2xts,
PerformanceAnalytics, xts, zoo
dplyr, ggplot2, lubridate, magrittr, pdp, purrr, ranger,
stringr, strucchange, testthat, tibble, viridis
dplyr, ggplot2, lubridate, magrittr, pdp, purrr, ranger,
stringr, strucchange, tibble, viridis
dplyr (>= 1.0.1), ggplot2, lubridate, magrittr, pdp, purrr,
ranger, stringr, strucchange, tibble, viridis, tidyr
httr, jsonlite, dplyr, lubridate, stringr
httr, dplyr, lubridate, stringr, purrr, tidyr
jsonlite, knitr, methods, ontologyIndex, rmarkdown, R6, R6P,
testthat, tools
coda, dplyr, fdrtool, gemtc, ggfittext, ggplot2, ggpubr,
ggrepel, knitr, MASS, mcmcplots, netmeta, pcnetmeta, R2jags,
reshape2, scales, stats, utils, writexl
coda, dplyr, fdrtool, gemtc, ggfittext, ggplot2, ggpubr,
ggrepel, knitr, MASS, mcmcplots, netmeta, pcnetmeta, R2jags,
reshape2, scales, writexl
dplyr, fdrtool, gemtc, ggfittext, ggplot2, ggpubr, ggrepel,
knitr, MASS, mcmcplots, netmeta, pcnetmeta, R2jags, reshape2,
scales, writexl
httr, lubridate, plyr, ggplot2, scales, rgdal, maptools,
stringr, XML, data.table
httr, lubridate, plyr, ggplot2, scales, sp, rgdal, rgeos,
maptools, stringr, XML, data.table, assertthat, jsonlite
httr, lubridate, plyr, ggplot2, scales, sp, RCurl, rgdal,
rgeos, maptools, stringr, XML, data.table, jsonlite, digest
httr, lubridate, plyr, dplyr, tidyr, ggplot2, scales, rgdal,
XML, data.table, jsonlite
methods, stats, utils, httr (>= 1.0.0), lubridate, dplyr,
tidyr, ggplot2, scales, rgdal, XML, jsonlite
methods, stats, utils, httr (>= 1.0.0), lubridate, dplyr,
tidyr, ggplot2, scales, XML, jsonlite
utils, httr (>= 1.0.0), lubridate, dplyr, tidyr, ggplot2,
scales, XML, jsonlite, rappdirs, gridExtra, tibble
utils, httr (>= 1.0.0), lubridate, dplyr, tidyr, ggplot2,
scales, XML, xml2, jsonlite, rappdirs, gridExtra, tibble
utils, httr (>= 1.0.0), lubridate, dplyr, tidyr, ggplot2,
scales, XML, xml2, jsonlite, rappdirs, gridExtra, tibble,
isdparser
utils, httr (>= 1.0.0), crul (>= 0.2.0), lubridate, dplyr,
tidyr, ggplot2, scales, XML, xml2, jsonlite, rappdirs,
gridExtra, tibble, isdparser (>= 0.2.0), geonames, hoardr
utils, crul (>= 0.6.0), lubridate, dplyr, tidyr, ggplot2,
scales, XML, xml2, jsonlite, rappdirs, gridExtra, tibble,
isdparser (>= 0.2.0), geonames, hoardr (>= 0.5.2)
utils, crul (>= 0.7.0), lubridate, dplyr, tidyr, ggplot2,
scales, XML, xml2, jsonlite, rappdirs, gridExtra, tibble,
isdparser (>= 0.2.0), geonames, hoardr (>= 0.5.2)
utils, crul (>= 0.7.0), lubridate, dplyr, tidyr, tidyselect,
ggplot2, scales, XML, xml2, jsonlite, rappdirs, gridExtra,
tibble, isdparser (>= 0.2.0), geonames, hoardr (>= 0.5.2)
utils, crul (>= 0.7.0), lubridate, dplyr, tidyr, tidyselect,
ggplot2, scales, XML, xml2, jsonlite, rappdirs, gridExtra,
tibble, isdparser (>= 0.2.0), geonames, hoardr (>= 0.5.2),
data.table
utils, crul (>= 0.7.0), lubridate, dplyr, tidyr, tidyselect,
ggplot2, scales, XML, xml2, jsonlite, gridExtra, tibble,
isdparser (>= 0.2.0), geonames, hoardr (>= 0.5.2), data.table
httr (>= 1.1.0), jsonlite (>= 0.9.19), data.table (>= 1.9.6),
sp (>= 1.1-0), tibble, curl, raster, rgdal, plyr, XML, magrittr
XML2R, RCurl, zoo, rjson, rgdal, sp, stringr
XML2R, RCurl, plyr, zoo, rjson, rgdal, sp, stringr
XML2R, RCurl, plyr, rjson, rgdal, sp, stringr, ggplot2,
cowplot, ggmap, xts
utils, cowplot, plyr, graphics, stats, RCurl, XML2R, stringr,
xts, rjson, ggmap, ggplot2, sp
utils, cowplot, plyr, graphics, stats, httr, xml2, stringr,
xts, rjson, ggmap, ggplot2, sp, parallel
plyr, graphics, stats, httr, xml2, stringr, xts, rjson, ggmap,
ggplot2, sp, parallel
rgdal, plyr, graphics, stats, httr, xml2, stringr, xts, rjson,
ggmap, ggplot2, sp, parallel
rgdal, dplyr, curl, jsonlite, lubridate, graphics, stats,
httr, xts, ggmap, ggplot2, sp, parallel, tibble
rgdal, dplyr, curl, jsonlite, lubridate, graphics, stats,
httr, zoo, ggmap, ggplot2, sp, parallel, tibble
rgdal, curl, jsonlite, lubridate, graphics, stats, httr, zoo,
ggmap, ggplot2, sp, parallel, tibble
curl, jsonlite, lubridate, graphics, stats, httr, zoo, ggmap,
ggplot2, sf, parallel, tibble
httr, jsonlite, dplyr, plyr, miniUI, shiny
httr, jsonlite, dplyr, plyr, miniUI, shiny (>= 1.0.3)
httr, jsonlite, dplyr, plyr, purrr, tibble, miniUI, shiny (>=
1.0.3), tidyr
httr, jsonlite, dplyr, plyr, purrr, tibble, miniUI, shiny (>=
1.0.3), tidyr, rlang
raster, dplyr, igraph, sp, data.table, SpaDES.tools, sf,
stars, units, rlang, methods, tidyselect
scales, robustbase, magrittr, dplyr, ggplot2, plotly
e1071, cvTools, rrcov, GGally, MASS, sROC, VIM
car, cvTools, rrcov, cluster, fpc, GGally, kernlab, MASS,
mclust, Rcpp, sROC, VIM, zCompositions
car, e1071, rrcov, cluster, cvTools, fpc, GGally, kernlab,
MASS, mclust, sROC, VIM
car, e1071, rrcov, cluster, cvTools, fpc, GGally, kernlab,
MASS, mclust, Rcpp, sROC, VIM
car, rrcov, cluster, cvTools, fpc, GGally, kernlab, MASS,
mclust, Rcpp, sROC, VIM
car, rrcov, cluster, cvTools, fpc, GGally, kernlab, MASS,
mclust, Rcpp, sROC, VIM, zCompositions
car, cvTools, rrcov, cluster, fpc, GGally, kernlab, MASS,
mclust, Rcpp, sROC, tidyr, VIM, zCompositions
car, cvTools, e1071, rrcov, cluster, fpc, GGally, kernlab,
MASS, mclust, sROC, tidyr, robustbase, VIM, zCompositions,
reshape2, Rcpp
car, cvTools, e1071, fda, rrcov, cluster, fpc, GGally,
kernlab, MASS, mclust, sROC, tidyr, robustbase, splines, VIM,
zCompositions, reshape2, Rcpp
car, cvTools, e1071, fda, rrcov, cluster, fpc, GGally,
ggfortify, kernlab, MASS, mclust, tidyr, robustbase, robustHD,
splines, VIM, zCompositions, reshape2, Rcpp
blockmodels (>= 1.1.2), ggplot2, GREMLINS, igraph, magrittr,
pammtools, partitions, purrr, stats
expm, fda.usc, goffda, mvtnorm, pcaPP, plot3D
ggplot2, networkD3, DescTools, fdatest, gridExtra, methods
ggplot2, networkD3, DescTools, fdatest, methods
ggplot2, networkD3, DescTools, fdatest, methods, gridExtra
ggplot2, networkD3, DescTools, fdatest, methods, gridExtra,
parallel
ggplot2, networkD3, DescTools, fdatest, methods, gridExtra,
parallel, spam, qpdf, Matrix
httr, dplyr, jsonlite, leaflet, ggplot2, tidyr, httpcache,
tibble, mapedit, sf, rlang, purrr, stringr, curl, data.table,
tidyselect, xml2, glue, memoise, stats, methods
httr, dplyr, jsonlite, leaflet, ggplot2, tidyr, httpcache,
tibble, mapedit, sf, rlang
httr, dplyr, jsonlite, leaflet, ggplot2, tidyr, httpcache,
tibble, mapedit, sf, rlang, purrr, stringr, curl
httr, dplyr, jsonlite, leaflet, ggplot2, tidyr, httpcache,
tibble, mapedit, sf, rlang, purrr, stringr, curl, data.table,
tidyselect, xml2
fastGHQuad, stats, bbmle, MASS, VGAM, actuar, Rcpp (>=
0.12.15), methods, boot, numDeriv
fastGHQuad, stats, bbmle, MASS, VGAM, actuar, Rcpp (>=
0.12.15), methods, boot, numDeriv, parallel, doParallel,
foreach, doRNG
fastGHQuad, stats, bbmle, VGAM, actuar, Rcpp (>= 0.12.15),
methods, boot, numDeriv, parallel, doParallel, foreach, doRNG,
MASS
Rdpack, gtools, robustbase, statmod, stats, utils, checkmate
plm, dplyr, ggplot2, broom, tidyr, tibble, stats,
Rcpp (>= 0.12.0), MASS, magrittr, graphics
survey (>= 3.35-1), stats, graphics, utils
grDevices, stats, survey (>= 3.35-1), KernSmooth
graphics, stats, utils, lattice, MASS, robustbase, rrcov
AER, doRNG, foreach, MASS, mathjaxr, pracma, stats
doRNG, exactci, foreach, ivreg, MASS, mathjaxr, pracma, stats
Rcpp (>= 0.12.1), numDeriv, mvtnorm, utils, parallel,
doParallel, foreach, iterators, stats
Rcpp (>= 0.9.10), RcppArmadillo (>= 0.3.0), MASS, parallel,
pcaPP, robustbase (>= 0.6-0), stats
MASS, Rcpp (>= 0.9.10), grDevices, parallel, stats, utils
utils, grDevices, graphics, Matrix, limma, biomaRt, dplyr,
ggplot2, reshape2, GGally, ggrepel, RColorBrewer, gplots,
ggpubr, cccd, rslurm, Rtsne, igraph, scales, RANN, Rcpp
grDevices, graphics, stats, utils, robustbase (>= 0.92-3)
stats, graphics, utils, methods, DEoptimR
Rmpfr, rstudioapi, crayon, pracma, numDeriv, Formula,
robustbase, zoo, methods, graphics, BBmisc, MASS, miscTools,
Matrix
ggplot2, lattice, nlme, methods, robustbase (>= 0.9.5), xtable
ggplot2, lattice, nlme, methods, robustbase (>= 0.9.5),
xtable, Rcpp (>= 0.12.2)
ggplot2, lattice, nlme, methods, robustbase (>= 0.93), xtable,
Rcpp (>= 0.12.2), fastGHQuad
ggplot2, lattice, nlme, methods, robustbase (>= 0.93), xtable,
Rcpp (>= 0.12.2), fastGHQuad, parallel, rlang, utils
robustbase, survival, numDeriv, RobustAFT (>= 1.4-1)
DiagrammeR (>= 1.0.0), parallel, data.tree (>= 0.7.5),
graphics, stats, survival (>= 2.38), methods, tibble, dplyr,
ggplot2, MASS, flexsurv
DiagrammeR (>= 1.0.0), data.tree (>= 0.7.5), graphics, stats,
survival (>= 2.38), tibble, dplyr, ggplot2, MASS, flexsurv,
Rcpp
DiagrammeR (>= 1.0.0), data.tree (>= 0.7.5), graphics, stats,
survival (>= 2.38), ggplot2, MASS, flexsurv, Rcpp
grDevices, methods, lme4, carData, MASS, kutils
dplyr, glue, magrittr, purrr, rlang, stringr, tibble
numDeriv, quadprog, Matrix, rootSolve, matrixcalc
jsonlite, splitstackshape, plyr, methods, utils
jsonlite, splitstackshape, plyr, stringr, methods, utils
jsonlite, splitstackshape, plyr, stringr, tibble, methods,
utils
dplyr, tidyr, magrittr, purrr, stats, rlang
checkmate (>= 1.8.5), data.table (>= 1.11.2), lubridate,
stats, tosca (>= 0.2-0), utils
checkmate, dplyr, ggplot2, glue, purrr, readr, reshape2,
rlang, shiny (>= 1.5.0), stringr, tibble, tidyr (>= 1.0.0)
httr, lubridate, dplyr, jsonlite, tidyr, lazyeval
crul, lubridate, dplyr, jsonlite, tidyr, lazyeval
crul, dplyr, jsonlite, lubridate, magrittr, rlang, tidyr
glue, magrittr, getPass, rstudioapi, stringr, git2r, fs,
glue, magrittr, getPass, rstudioapi, stringr, git2r, fs,
RCurl, XML, cli,
glue, magrittr, getPass, rstudioapi, stringr, git2r, RCurl,
XML, cli, pingr, withr, rlang, fs, rvest
glue, magrittr, getPass, rstudioapi, stringr, git2r, fs,
RCurl, XML, cli, pingr,
glue, magrittr, getPass, rstudioapi, stringr, git2r, fs,
RCurl, XML, cli, pingr, withr, rlang, emojifont,
glue, magrittr, getPass, rstudioapi, stringr, git2r, RCurl,
XML, cli, pingr, withr, rlang, emojifont,
glue, magrittr, getPass, rstudioapi, stringr, git2r, RCurl,
XML, cli, pingr, withr, rlang, fs
glue, magrittr, getPass, rstudioapi, stringr, git2r, RCurl,
XML, cli, pingr, withr, rlang, fs,
rvest, httr, xml2, dplyr, stringr, haven, foreign
rvest, httr, xml2, dplyr, stringr, haven, foreign, tibble,
tidyr, readr
RSelenium, dplyr, foreign, haven, magrittr, readr, rio,
stringr, tibble, tidyr
methods, stats, utils, httr (>= 1.0.0), jsonlite
methods, stats, utils, httr (>= 1.1.0), jsonlite
abind, jpeg, png, sp, rgdal, digest, rjson, methods
abind, jpeg, png, sp, rgdal, digest, rjson, methods, foreach
curl, abind, jpeg, png, sp, rgdal, rjson, methods, plyr,
prettymapr
curl, abind, jpeg, png, sp, rgdal, rjson, methods, plyr,
prettymapr, tools
abind, jpeg, png, sp, rgdal, rjson, methods, plyr, prettymapr
stats, graphics, parallel, mrfDepth, robustbase (>= 0.92-6),
pcaPP, rrcov, rrcovHD (>= 0.2-3), elasticnet, mvtnorm, pracma
stats, graphics, parallel, mrfDepth (>= 1.0.3), robustbase (>=
0.92-6), pcaPP, rrcov, rrcovHD (>= 0.2-3), elasticnet, mvtnorm,
pracma
stats, graphics, parallel, mrfDepth (>= 1.0.5), robustbase (>=
0.92-6), pcaPP, rrcov, rrcovHD (>= 0.2-3), elasticnet, mvtnorm,
pracma
rmarkdown, bookdown, blogdown, tinytex, mindr, bookdownplus,
rstudioapi, htmlwidgets, shiny, devtools, clipr, knitr
rmarkdown, bookdown, blogdown, tinytex, mindr, bookdownplus,
rstudioapi, htmlwidgets, shiny, devtools
rmarkdown, bookdown, blogdown, tinytex, mindr, bookdownplus,
rstudioapi, htmlwidgets, shiny, devtools, clipr
ggplot2, gridExtra, Rcpp, rgl, sphereplot
httr, jsonlite, assertthat, rncl (>= 0.6.0), ape
httr, jsonlite, assertthat (>= 0.1), rncl (>= 0.6.0), ape,
rentrez
ape, assertthat (>= 0.1), httr, jsonlite, rentrez, rncl (>=
0.6.0)
ape, curl (>= 3.0.0), httr, jsonlite, rentrez, rlang, rncl (>=
0.6.0)
R6, httpuv, assertthat, uuid, utils, reqres, stringi, tools,
digest
R6, assertthat, uuid, reqres, stringi, tools, digest
stringr (>= 0.5), tools, brew, digest, codetools, methods
stringr (>= 0.5), tools, brew, digest, codetools, methods,
Rcpp
stringr (>= 0.5), brew, digest, methods, Rcpp (>= 0.11.0)
stringr (>= 0.5), stringi, brew, digest, methods, Rcpp (>=
0.11.0)
stringr (>= 0.5), stringi, brew, digest, methods, Rcpp (>=
0.11.0), R6, desc, commonmark, xml2, utils
brew, commonmark, desc, digest, methods, pkgload, purrr, R6
(>= 2.1.2), Rcpp (>= 0.11.0), stringi, stringr (>= 1.0.0),
utils, xml2
brew, commonmark, desc (>= 1.2.0), digest, methods, pkgload
(>= 1.0.2), purrr, R6 (>= 2.1.2), Rcpp (>= 0.11.0), stringi,
stringr (>= 1.0.0), utils, xml2
brew, commonmark, desc (>= 1.2.0), digest, methods, pkgload
(>= 1.0.2), purrr, R6 (>= 2.1.2), Rcpp (>= 0.11.0), rlang,
stringi, stringr (>= 1.0.0), utils, xml2
brew, commonmark, desc (>= 1.2.0), digest, methods, pkgload
(>= 1.0.2), purrr (>= 0.3.3), R6 (>= 2.1.2), Rcpp (>= 0.11.0),
rlang, stringi, stringr (>= 1.0.0), utils, xml2
brew, commonmark, desc (>= 1.2.0), digest, knitr, methods,
pkgload (>= 1.0.2), purrr (>= 0.3.3), R6 (>= 2.1.2), Rcpp (>=
0.11.0), rlang, stringi, stringr (>= 1.0.0), utils, xml2
brew, commonmark, desc (>= 1.2.0), digest, knitr, methods,
pkgload (>= 1.0.2), purrr (>= 0.3.3), R6 (>= 2.1.2), rlang,
stringi, stringr (>= 1.0.0), utils, xml2
brew, cli (>= 3.3.0), commonmark, desc (>= 1.2.0), digest,
knitr, methods, pkgload (>= 1.0.2), purrr (>= 0.3.3), R6 (>=
2.1.2), rlang (>= 1.0.0), stringi, stringr (>= 1.0.0), utils,
withr, xml2
desc, devtools, enc, rex, rlang, tibble, usethis, withr
methods, stats, utils, graphics, tools, Rcpp (>= 1.0.0)
methods, stats, utils, graphics, tools, Rcpp (>= 1.0.3)
assertthat, stringr, dplyr, combinat, xlsx, methods, utils
datacheckr (>= 0.1.0), dplyr, curl, lubridate, magrittr,
readr, stringr, tidyr
ggplot2, crul (>= 0.5.2), jsonlite, grid, gridBase, graphics,
png
httr, jsonlite, ape, utils, phylobase, methods, rentrez (>=
1.0.4)
Rcpp, DBI, data.table, lubridate, reshape2, stringi,
assertthat
Rcpp, dplyr (>= 0.3), RSQLite (>= 1.0), DBI, data.table,
lubridate, reshape2, stringi, assertthat, parallel, doParallel,
foreach
Rcpp, DBI, lubridate, plyr, reshape2, assertthat
Rcpp, DBI, lubridate, reshape2, assertthat
Rcpp (>= 0.11.5), dplyr (>= 0.3), RSQLite (>= 1.0), DBI,
data.table, lubridate, reshape2, stringi, assertthat, parallel,
doParallel, foreach
Rcpp (>= 0.11.5), dplyr (>= 0.3), RSQLite (>= 1.0), DBI,
data.table, tidyr, lubridate, stringi, parallel, doParallel,
foreach
Rcpp (>= 0.11.5), dplyr (>= 0.3), RSQLite (>= 1.1), DBI (>=
0.5), data.table, tidyr, lubridate, stringi, parallel,
doParallel, foreach
RCurl, RJSONIO, XML, googleVis, ggplot2, plyr, reshape2,
stringr
ggplot2, RCurl, RJSONIO, XML, plyr, stringr, reshape2,
googleVis
ggplot2, RCurl, RJSONIO, XML, plyr, stringr, reshape,
googleVis, httr, grid, gridExtra
RCurl, RJSONIO, XML, plyr, stringr, googleVis, httr, grid,
gridExtra, lubridate, reshape2
RCurl, RJSONIO, XML, plyr, stringr, googleVis, httr,
lubridate, reshape2
RCurl, RJSONIO, XML, plyr, stringr, googleVis, httr,
lubridate, reshape2, data.table, whisker, solr, assertthat
httr, jsonlite, XML, dplyr, plyr, lubridate, reshape2,
whisker, solr
methods, utils, stats, httr, jsonlite, dplyr, plyr, lubridate,
reshape2, whisker, solr
methods, utils, stats, httr, jsonlite, dplyr, plyr, lubridate,
reshape2, whisker, solr (<= 0.1.4)
methods, utils, stats, httr, jsonlite, dplyr, plyr, lubridate,
reshape2, whisker, solr (<= 0.1.6)
methods, utils, stats, ggplot2, httr (>= 1.0.0), jsonlite,
dplyr, plyr, lubridate, reshape2, whisker, solr (<= 0.1.6)
ggplot2, httr (>= 1.0.0), jsonlite, dplyr, plyr, lubridate,
reshape2, whisker, solr (<= 0.1.6)
ggplot2, crul (>= 0.4.0), jsonlite, dplyr, plyr, lubridate,
reshape2, whisker, solrium (>= 1.0.0)
ggplot2, crul (>= 0.7.4), jsonlite, dplyr, plyr, lubridate,
reshape2, whisker, solrium (>= 1.0.2)
sp, lubridate, shiny, leaflet, htmltools, mapview,
shinyWidgets, magrittr, sf
gamlss.dist, lme4, Matrix, MASS, mvtnorm
gamlss.dist, lme4, Matrix, MASS, mvtnorm, Rcpp,
httr, jsonlite, dplyr, DT, dygraphs, magrittr, stringr,
quantmod, xts, shiny
httr, jsonlite, dplyr, DT, dygraphs, magrittr, quantmod, xts,
shiny
abind, doParallel, dplyr, foreach, ggplot2, lazyeval,
magrittr, rms, tidyr
doParallel, dplyr, foreach, ggplot2, lazyeval, magrittr, rms,
tidyr
data.table, doParallel, dplyr, foreach, ggplot2, lazyeval,
lubridate, magrittr, tidyr
data.table, dplyr, ggplot2, lazyeval, lubridate, magrittr,
tidyr
stringr (>= 1.0.0), stringi, plyr, tools, assertthat
assertthat, plyr, stringi, stringr (>= 1.0.0), tools, utils
methods, stats, lme4, parallel (>= 3.1.2)
methods, stats, lme4, parallel (>= 3.1.2), pbapply
XML, car, RCurl, RJSONIO, data.table, iterators, itertools,
stringr, fingerprint, base64enc, methods
methods, quantreg, hqreg, hrqglas, data.table, Rdpack,
lifecycle, plyr
wrapr (>= 1.8.2), utils, stats, methods,
wrapr (>= 1.8.3), utils, stats, methods,
lme4, phylolm (>= 2.6.2), ape, utils, Matrix, nlme, phyr (>=
1.0.3)
MASS, Rcpp (>= 1.0.7), Matrix, matrixcalc, gtools, utils
MASS, Rcpp (>= 1.0.8), Matrix, matrixcalc, gtools, utils
stats, stats4, mvtnorm, lattice, cluster, pcaPP
stats4, mvtnorm, lattice, cluster, pcaPP
rrcov, robustbase, ThreeWay, nnls, pracma
stats4, pls, spls, pcaPP, robustHD, Rcpp
ggplot2 (>= 2.1.0), directlabels, grid, stats
lhs, sensitivity, ggplot2, digest, xlsx, gridExtra
lhs, sensitivity, ggplot2, digest, xlsx, gridExtra,
doParallel, parallel, foreach
lhs, sensitivity, ggplot2, digest, xlsx, doSNOW, rJava,
gridExtra, parallel, foreach
stats, graphics, mc2d, eha, msm, tcltk, tkrplot
ggplot2, glmnet, lassoshooting, MASS, Rcpp (>= 0.12.0)
Rcpp, MASS, magrittr, dplyr, ggplot2, plotly, GGally
foreach, parallel, doParallel, DEoptim, abind
stringr, ggplot2 (>= 2.2.0), officer (>= 0.3.0), purrr (>=
0.2.4), flextable (>= 0.4.4), rvg, magrittr, devEMF, moonBook
(>= 0.1.8), rmarkdown, shiny, editData, readr (>= 1.1.1),
ztable (>= 0.1.8)
stringr, ggplot2 (>= 2.2.0), officer (>= 0.3.5), purrr (>=
0.2.4), flextable (>= 0.4.4), rvg, magrittr, devEMF, moonBook
(>= 0.1.8), rmarkdown, shiny, editData, readr (>= 1.1.1),
ztable (>= 0.1.8)
stringr, ggplot2 (>= 2.2.0), officer (>= 0.3.5), purrr (>=
0.2.4), flextable (>= 0.4.4), rvg, magrittr, devEMF, moonBook
(>= 0.1.8), rmarkdown, shiny, editData, shinyWidgets, ggpubr,
rlang, readr (>= 1.1.1), ztable (>= 0.1.8)
stringr, ggplot2 (>= 2.2.0), officer (>= 0.4.1), purrr (>=
0.2.4), flextable (>= 0.4.4), rvg, magrittr, devEMF, moonBook
(>= 0.1.8), rmarkdown, shiny, editData, shinyWidgets, ggpubr,
rlang, readr (>= 1.1.1), ztable (>= 0.1.8)
raster, sp, caret, rgdal, gdalUtils, ggplot2, grDevices,
ncdf4, RCurl, XML, httr
raster, sp, caret, rgdal, gdalUtils, ggplot2, grDevices, RCurl
raster, sp, caret, rgdal, gdalUtils, ggplot2, grDevices,
RCurl, spatialEco, lubridate, pryr, igraph, lattice,
randomForest
raster, sp, caret, rgdal, gdalUtils, ggplot2, grDevices,
RCurl, spatialEco, lubridate, pryr, plyr, igraph, lattice,
randomForest
raster, sp, caret, ggplot2, grDevices, pryr, plyr, Rcpp,
lubridate, RCurl
dplyr, purrr, tibble, rlang, tidyr, methods
dplyr, purrr, tibble, rlang, methods, recipes
dplyr, purrr, tibble, rlang, methods, generics
dplyr, purrr, tibble (>= 2.0.0), rlang, methods, generics
dplyr, purrr, tibble, rlang (>= 0.4.0), methods, generics,
utils, tidyselect, furrr
dplyr, purrr, tibble, rlang (>= 0.4.0), methods, generics,
utils, tidyselect, furrr, tidyr
dplyr (>= 0.8.5), purrr, tibble, rlang (>= 0.4.0), methods,
generics, utils, tidyselect, furrr, tidyr, vctrs (>= 0.3.0)
dplyr (>= 0.8.5), purrr, tibble, rlang (>= 0.4.0), methods,
generics, utils, tidyselect, furrr, tidyr, vctrs (>= 0.3.0),
modeldata, slider (>= 0.1.5), ellipsis
dplyr (>= 1.0.0), purrr, tibble, rlang (>= 0.4.10), methods,
generics, utils, tidyselect, furrr, tidyr, vctrs (>= 0.3.0),
slider (>= 0.1.5), ellipsis
dplyr (>= 1.0.0), purrr, tibble, rlang (>= 0.4.10), methods,
generics, tidyselect, furrr, tidyr, vctrs (>= 0.3.0), slider
(>= 0.1.5), ellipsis, lifecycle
dplyr (>= 1.0.0), ellipsis, furrr, generics, lifecycle,
methods, purrr, rlang (>= 0.4.10), slider (>= 0.1.5), tibble,
tidyr, tidyselect, vctrs (>= 0.3.0)
dplyr (>= 1.0.0), ellipsis, furrr, generics, glue, methods,
pillar, purrr, rlang (>= 0.4.10), slider (>= 0.1.5), tibble,
tidyr, tidyselect, vctrs (>= 0.3.0)
XML, curl, httr, leafem, leaflet, rjson, rvest, tmap, xml2,
zip, methods, sp, Rdpack, fields, calendR, raster, sf, stars,
terra
graphics, magrittr, stats, xml2, httr (>= 0.5), rvest,
stringr, tibble, purrr, dplyr
digest, PKI, RCurl, RJSONIO, packrat (>= 0.4.7), yaml (>=
2.1.5), rstudioapi (>= 0.5)
digest, PKI, RCurl, RJSONIO, packrat (>= 0.4.8-1), yaml (>=
2.1.5), rstudioapi (>= 0.5)
openssl, RCurl, jsonlite, packrat (>= 0.4.8-1), yaml (>=
2.1.5), rstudioapi (>= 0.5)
curl, jsonlite, openssl, packrat (>= 0.4.8-1), rstudioapi (>=
0.5), yaml (>= 2.1.5)
curl, digest, jsonlite, openssl, packrat (>= 0.4.8-1),
rstudioapi (>= 0.5), yaml (>= 2.1.5)
curl, digest, jsonlite, openssl, packrat (>= 0.5), rstudioapi
(>= 0.5), yaml (>= 2.1.5)
curl, digest, jsonlite, openssl, packrat (>= 0.6), rstudioapi
(>= 0.5), yaml (>= 2.1.5)
curl, digest, jsonlite, openssl, packrat (>= 0.6), rstudioapi
(>= 0.5), tools, yaml (>= 2.1.5)
curl, digest, jsonlite, openssl (>= 2.0.0), packrat (>= 0.6),
rstudioapi (>= 0.5), tools, yaml (>= 2.1.5)
httr, utils, stats, plyr, tidyr, dplyr, tools
httr, jsonlite, utils, stats, plyr, tidyr, dplyr, tools, glue
dplyr, httr, jsonlite, lazyeval, magrittr, tidyselect
dplyr, httr, jsonlite, lazyeval, magrittr, tidyselect, tidyr,
purrr
dplyr, httr, jsonlite, lazyeval, magrittr, tidyr, purrr
dplyr, httr, jsonlite, lazyeval, magrittr
methods, XML (>= 3.96-1.1), RCurl, plyr, utils
methods, XML (>= 3.98.1.3), RCurl, plyr, utils
methods, XML (>= 3.98-1.3), RCurl, plyr, utils
R6, methods, XML (>= 3.98-1.3), httr, plyr, utils
dplyr, Matrix, rlang, igraph, purrr, tibble, minpack.lm,
magrittr, methods, stats
dplyr, Matrix, rlang (>= 0.1.2), igraph, purrr, tibble,
minpack.lm, magrittr, methods, stats
bookdown, stringr, usethis, whoami, yaml
bookdown, knitr, magrittr, rlang, usethis, yaml, ymlthis
bookdown, gert, here, knitr, magrittr, renv, rlang, usethis,
yaml, ymlthis
grid, zoo, tibble, dplyr, ggplot2, magrittr
BBmisc, glmnet, superpc, survcomp, Matrix
checkmate, generics, ggridges, ggplot2, knitr, lifecycle,
rlang (>= 0.4.0), scales, stats
checkmate, ggridges, ggplot2, rlang, stats
checkmate, ggridges, ggplot2, rlang (>= 0.4.0), scales, stats
checkmate, ggridges, ggplot2, knitr, rlang (>= 0.4.0), scales,
stats
jsonlite, httr, stringr, dplyr, lubridate
graphics, utils, shiny (>= 0.13), miniUI (>= 0.1.1),
rstudioapi (>= 0.5), berryFunctions (>= 1.17.21)
graphics, utils, rstudioapi (>= 0.5), berryFunctions (>=
1.17.21)
edfReader, jsonlite, ggplot2, signal, phonTools
edfReader, jsonlite, ggplot2, signal, phonTools, psd
stringr, stringi, plyr, rvest, magrittr, Rcpp, xml2
stringr, stringi, plyr, magrittr, tokenizers
RJSONIO, plyr, stringr, httr, RCurl, XML
plyr, stringr, httr, RCurl, XML, jsonlite
plyr, stringr, httr (>= 1.2.0), XML, jsonlite
plyr, stringr, crul (>= 0.5.2), data.table, XML, xml2,
jsonlite
plyr, stringr, crul (>= 0.5.2), data.table, jsonlite, RJSONIO,
httr
plyr, stringr, crul (>= 0.5.2), data.table, jsonlite, httr
lubridate (>= 1.6.0), tibble (>= 1.3.1), utils, stats
restfulr (>= 0.0.2), graph, S4Vectors (>= 0.14.3), rjson, XML,
RCurl
restfulr (>= 0.0.2), graph, S4Vectors (>= 0.7.18), rjson, XML,
RCurl
dplyr, foreach, doParallel, igraph, tidyr, stringr
methods, stats, MASS, lme4, nlme, numDeriv, Matrix
methods, stats, MASS, lme4, nlme, Deriv, Matrix
config, golem, shiny, RSQLite, DT, shinyFiles, fs, shinyAce,
shinyjqui, shinydashboard, disk.frame, data.table, magrittr
httr, crayon, utils, magrittr, jsonlite, lifecycle
methods, stats4, inline, gridExtra (>= 2.0.0), Rcpp (>=
0.12.0)
methods, stats4, inline, gridExtra (>= 2.0.0), Rcpp (>=
0.12.0), loo (>= 2.0.0), pkgbuild
methods, stats4, inline, gridExtra (>= 2.0.0), Rcpp (>=
0.12.0), RcppParallel (>= 5.0.1), loo (>= 2.3.0), pkgbuild, V8
methods, stats4, inline, gridExtra (>= 2.0.0), Rcpp (>=
0.12.0), RcppParallel (>= 5.0.1), loo (>= 2.3.0), pkgbuild,
withr, V8
methods, stats4, inline, gridExtra (>= 2.0.0), Rcpp (>=
0.12.0), RcppParallel (>= 5.0.1), loo (>= 2.3.0), pkgbuild
methods, stats4, inline, gridExtra (>= 2.0.0), Rcpp (>=
0.11.0)
desc, stats, utils, Rcpp (>= 0.12.16), RcppParallel (>= 5.0.1)
stats, utils, tidyr, purrr, broom, rlang, tibble, dplyr (>=
0.7.1), magrittr, corrplot, tidyselect, car
stats, utils, tidyr, purrr, broom, rlang (>= 0.3.1), tibble,
dplyr (>= 0.7.1), magrittr, corrplot, tidyselect, car
stats, utils, tidyr (>= 1.0.0), purrr, broom, rlang (>=
0.3.1), tibble, dplyr (>= 0.7.1), magrittr, corrplot,
tidyselect, car
stats, utils, tidyr (>= 1.0.0), purrr, broom, rlang (>=
0.3.1), tibble (>= 2.1.3), dplyr (>= 0.7.1), magrittr,
corrplot, tidyselect (>= 1.0.0), car
stats, utils, tidyr (>= 1.0.0), purrr, broom (>= 0.5.6), rlang
(>= 0.3.1), tibble (>= 2.1.3), dplyr (>= 0.7.1), magrittr,
corrplot, tidyselect (>= 1.0.0), car, generics (>= 0.0.2)
stats, utils, tidyr (>= 1.0.0), purrr, broom (>= 0.7.4), rlang
(>= 0.3.1), tibble (>= 2.1.3), dplyr (>= 0.7.1), magrittr,
corrplot, tidyselect (>= 1.0.0), car, generics (>= 0.0.2)
graphics, Rcpp (>= 0.10.2), numDeriv, stats, mgcv, bbmle (>=
1.0.3)
graphics, Rcpp (>= 0.10.2), numDeriv, stats, mgcv, bbmle (>=
1.0.3), fastGHQuad
graphics, Rcpp (>= 0.10.2), numDeriv, stats, mgcv, bbmle (>=
1.0.20), fastGHQuad
graphics, Rcpp (>= 0.10.2), stats, mgcv, bbmle (>= 1.0.20),
fastGHQuad
graphics, Rcpp (>= 0.10.2), stats, mgcv, bbmle (>= 1.0.20),
fastGHQuad, deSolve, utils, parallel
httr, plyr, jsonlite, stringr, assertthat
methods, utils, httr, plyr, jsonlite, stringr
methods, utils, crul, plyr, jsonlite, stringr, tibble,
data.table
Rcpp (>= 1.0.5), MASS, stats, utils, matrixStats
methods, DBI, RSQLite, raster, gtools, lifecycle
igraph, tidyselect, methods, stringi, digest, rlang, magrittr,
tokenbrowser, base64enc, png, data.table (>= 1.11.8)
knitr, rmarkdown, bookdown, DT, ggplot2, xfun
cli, dplyr, httr2, purrr, retry, snakecase, stringr, tidyr,
utils
cli, dplyr, httr2, purrr, snakecase, stringr, tidyr, utils
utils, rmarkdown, knitr, yaml, tinytex, xfun
utils, rmarkdown, knitr, yaml, tinytex (>= 0.19), xfun
utils, rmarkdown (>= 1.16), knitr, yaml, tinytex (>= 0.19),
xfun
utils, rmarkdown (>= 1.18), knitr (>= 1.30), yaml, tinytex (>=
0.19), xfun
utils, rmarkdown (>= 2.5), knitr (>= 1.30), yaml, tinytex (>=
0.27), xfun
utils, rmarkdown (>= 2.5), knitr (>= 1.30), yaml, tinytex (>=
0.30), xfun
knitr (>= 1.30), rmarkdown (>= 2.5), tinytex (>= 0.30), utils,
xfun, yaml
knitr (>= 1.30), rmarkdown (>= 2.14), tinytex (>= 0.30),
utils, xfun, yaml
dplyr, ggplot2, glue, magrittr, mgcv, purrr, readr, rlang,
stats, stringr, tibble, tidymv, tidyr, tidyverse, tidyselect
dplyr, ggplot2, glue, magrittr, mgcv, purrr, readr, rlang,
stats, tibble, tidymv, tidyr, tidyselect
settings, httr, rmarkdown, utils, jsonlite, bookdown, stringr
abind, datacheckr (>= 0.1.1), dplyr, lubridate, magrittr,
plyr, stringr, tidyr, tibble, utils
abind, datacheckr (>= 0.1.1), lubridate, magrittr, plyr,
stringr, tidyr, tibble, utils
abind, chk (>= 0.4.0), dttr2, utils, tibble
DataCombine, DescTools, deSolve, dplyr, ggplot2, gridExtra,
interactions, lattice, lme4, MASS, mclust, nlme, nnet, plyr,
zoo
curl, sys, stats, utils, rappdirs, digest
curl, sys (>= 2.1), stats, utils, rappdirs, digest
curl, sys (>= 2.1), stats, utils, digest, backports
utils, httr, jsonlite, dplyr, tibble, data.table
utils, crul (>= 0.3.8), jsonlite, dplyr, tibble, data.table
lubridate, ggplot2, dplyr (>= 0.4.3), rbokeh, R6, changepoint,
tibble, tidyr, lazyeval, readr, pathological, stringr, knitr,
methods
changepoint, dplyr (>= 0.4.3), fs, ggplot2, knitr, lazyeval,
lubridate, methods, R6, rbokeh, readr, stringr, tibble, tidyr
coda, data.table, LaplacesDemon, loo, methods, stats, stringr,
truncnorm, utils
coda, data.table, loo, matrixcalc, methods, stats, stringr,
truncnorm, utils
coda, data.table, loo, methods, stats, stringr, truncnorm,
utils
coda, data.table, loo, methods, Ryacas, stats, stringr,
truncnorm, utils
digest, dplyr, getPass, glue, httr, keyring, magrittr, purrr,
utils
clipr, curl, dplyr, httr, jsonlite, tibble
gstat, graphics, stats, methods, utils, grDevices, rgdal
gstat, graphics, stats, methods, utils, grDevices
magrittr, dplyr, jsonlite, xml2, rvest, jpeg, purrr, ggplot2,
memoise, tibble, tidyr, downloader
Rcpp, fftwtools, boot, magrittr, matrixStats, ggplot2
Rcpp, fftwtools, boot, magrittr, matrixStats, terra, plyr,
ggplot2
Rcpp, fftwtools, boot, magrittr, matrixStats, lubridate,
terra, plyr
utils, data.table, dplyr, tidyr, jsonlite, curl
methods, sp (>= 1.4.1), zoo, RCurl, raster
ggplot2, RStoolbox, moveVis, raster, stats, dplyr, pbapply,
sp, sf, tidyr, assertthat
ggplot2, RStoolbox, moveVis, raster, stats, dplyr, pbapply,
sp, sf, tidyr, forcats, assertthat, magrittr
quantmod, zoo, alfred, Quandl, anytime, data.table, mongolite,
curl
quantmod, zoo, alfred, Quandl, anytime, data.table, mongolite,
brotli, curl
quantmod, zoo, Quandl, anytime, data.table, mongolite, brotli,
curl
httpuv, httr (>= 1.0.0), jsonlite, openssl
httr (>= 1.0.0), jsonlite, magrittr, openssl
bit64, httr (>= 1.0.0), jsonlite, magrittr, openssl, readr,
tibble, utils
httr (>= 1.3.0), jsonlite (>= 0.9.22), magrittr (>= 1.5.0),
tibble (>= 1.3.4), utils, progress, Rcpp, httpuv
httr (>= 1.3.0), jsonlite (>= 0.9.22), magrittr (>= 1.5),
tibble (>= 1.3.4), utils, progress, Rcpp, httpuv
jsonlite, httr, purrr, utils, tibble, dplyr, glue, lubridate,
tidyr
assertthat, dplyr, glue, httr, jsonlite, lubridate, purrr,
tibble, tidyr, utils
assertthat, dplyr (>= 1.0.0), glue, httr, jsonlite, lubridate,
purrr, rlang, tibble, tidyr, utils
dplyr, ggplot2, gtools, magrittr, Rcpp (>= 0.12.5), readr,
rlang, stringr, tibble, tidyr
dplyr, gtools, magrittr, Rcpp (>= 0.12.5), readr, rlang,
stringr, tibble, tidyr, RcppParallel
Rsolnp, nloptr, ks, numDeriv, spd, xts, zoo, chron
Rsolnp, nloptr, ks, numDeriv, spd, xts, zoo, chron,
SkewHyperbolic
Rsolnp, nloptr, ks, numDeriv, spd, xts, zoo, chron,
SkewHyperbolic, expm, Rcpp
Rsolnp, nloptr, ks, numDeriv, spd, xts, zoo, chron,
SkewHyperbolic, expm, Rcpp,graphics, stats, grDevices, utils
Rsolnp, nloptr, ks, numDeriv, spd, xts, zoo, chron,
SkewHyperbolic, Rcpp,graphics, stats, grDevices, utils
Rsolnp, ks, numDeriv, spd, xts, zoo, chron, SkewHyperbolic,
Rcpp,graphics, stats, grDevices, utils
Rcpp (>= 0.11.5), utils, graphics, stats
keyholder, dplyr (>= 0.7.0), rlang, tidyr (>= 0.7.0)
keyholder, dplyr (>= 0.7.0), rlang, tibble, tidyr (>= 0.7.0)
dplyr (>= 0.7.0), keyholder, rlang, tibble, tidyr (>= 0.7.0)
dplyr (>= 0.7.0), keyholder, rlang, tibble, tidyr (>= 0.7.0),
magrittr
purrr, rlang, tibble, dials, tidyr, dplyr
purrr, rlang, tibble, dials, tidyr, dplyr, stringr, generics
(>= 0.1.0)
dials, dplyr, generics (>= 0.1.0), purrr, rlang, stringr,
tibble, tidyr
dials (>= 0.1.1.9001), dplyr, generics (>= 0.1.0), purrr,
rlang, stringr, tibble, tidyr
parallel, lattice (>= 0.20-10), coda (>= 0.16-1), stats, utils
parallel, lattice (>= 0.20-10), coda (>= 0.17-1), stats, utils
XML, httr (>= 0.6.1), plyr, foreach, stringr, testthat
XML, httr (>= 0.6.1), plyr, foreach, stringr, testthat,
taxize, RCurl
dplyr, ggforce, ggplot2, reshape2, shiny, tidyr
stats, graphics, methods, spatstat, Rcpp (>= 0.12.10)
graphics, methods, Rcpp (>= 0.12.10), spatstat, stats
RCurl (>= 1.6), plyr, RJSONIO, httr (>= 0.2), ggplot2, maps
plyr, jsonlite, httr, data.table, ggplot2, maps
plyr, jsonlite, httr, dplyr, ggplot2, maps
methods, stats, utils, plyr, jsonlite, httr, dplyr, ggplot2,
maps
jsonlite (>= 1.5), crul (>= 0.5.2), dplyr (>= 0.5.0), tibble,
ggplot2, maps
httr (>= 0.5), lifecycle (>= 1.0.0), magrittr, rlang (>=
0.4.10), selectr, tibble, xml2 (>= 1.3)
glue, cli, httr (>= 0.5), lifecycle (>= 1.0.0), magrittr,
rlang (>= 1.0.0), selectr, tibble, xml2 (>= 1.3), withr
grDevices, Rcpp, xml2, gdtools, utils, R.utils
grDevices, Rcpp, xml2, gdtools, grid, utils, R.utils
grDevices, Rcpp, xml2 (>= 1.0.0), gdtools, utils, R.utils
grDevices, Rcpp, xml2 (>= 1.0.0), gdtools (>= 0.1.0), utils,
R.utils
graphics, grDevices, lattice, Rcpp (>= 0.12.12), stats, utils
assertthat, cctools, graphics, grDevices, kde1d, lattice, Rcpp
(>= 0.12.12), stats, utils
assertthat, graphics, grDevices, kde1d (>= 1.0.2), lattice,
Rcpp (>= 0.12.12), stats, utils
dplyr (>= 1.0.0), tidyr (>= 1.0.0), jsonlite, httr, stringr,
lgr
methods, R6, glue, cli, dplyr, tibble, checkmate, stringr
dplyr, getPass, httr, readr, jsonlite, stringr, htmltools
biglm, dplyr, lubridate, magrittr, stats, pryr, arm, ggplot2,
scales
reshape2, phangorn, coda, viridis, grid, plyr, ggdendro,
GGally, parallel,
httr, dplyr, countrycode, lubridate, tibble
PreciseSums (>= 0.3), Rcpp (>= 0.12.3), backports, cli (>=
2.0.0), checkmate, ggplot2, inline, lotri (>= 0.4.0), magrittr,
memoise, methods, rex, sys, tools, utils, rxode2ll(>= 2.0.9),
rxode2et (>= 2.0.9), rxode2parse (>= 2.0.11), rxode2random (>=
2.0.9), data.table (>= 1.12.4), qs
PreciseSums (>= 0.3), Rcpp (>= 0.12.3), backports, cli (>=
2.0.0), checkmate, ggplot2, inline, lotri (>= 0.4.0), magrittr,
memoise, methods, rex, sys, tools, utils, rxode2ll(>= 2.0.9),
rxode2et (>= 2.0.9), rxode2parse (>= 2.0.12), rxode2random (>=
2.0.9), data.table (>= 1.12.4), qs
PreciseSums (>= 0.3), Rcpp (>= 0.12.3), assertthat, backports,
checkmate, cli (>= 2.0.0), dparser (>= 0.1.8), ggplot2, inline,
lotri (>= 0.4.0), magrittr, memoise, methods, rex, qs, sys,
tools, utils
PreciseSums (>= 0.3), Rcpp (>= 0.12.3), backports, cli (>=
2.0.0), checkmate, ggplot2, inline, lotri (>= 0.4.0), magrittr,
memoise, methods, rex, sys, tools, utils, rxode2ll, rxode2et,
rxode2parse, rxode2random, data.table (>= 1.12.4), qs
stats, utils, methods, Rcpp, checkmate, rxode2random,
rxode2parse, cli, crayon, magrittr, lotri
checkmate, crayon, devtools, dparser, knitr, qs, Rcpp (>=
1.0.9), utils
checkmate, crayon, dparser, knitr, qs, Rcpp (>= 1.0.8), utils
utils, httr, bitops, jsonlite, xml2, data.table, readr,
magrittr, dplyr
utils, httr, bitops, jsonlite, xml2, data.table, readr,
magrittr, dplyr, tidyr (>= 1.0.0), purrr, stringr
cli, dplyr, gargle, snakecase, stringr, tidyr, pbapply, httr,
withr, rlang
anytime, ggplot2, httr, jsonlite, rvest, stringr, xml2
anytime, httr, jsonlite, openssl, rvest, stringr, xml2
httr, jsonlite, magrittr, dplyr, lubridate, purrr, methods,
data.table
abind, bigmemory, GEOmap, geomapdata, graphics, grDevices,
mapproj, parallel, ClimProjDiags, stats, plyr, ncdf4,
multiApply (>= 2.0.0)
abind, bigmemory, GEOmap, geomapdata, graphics, grDevices,
mapproj, parallel, ClimProjDiags, stats, plyr, ncdf4,
multiApply (>= 2.1.1)
abind, bigmemory, GEOmap, geomapdata, graphics, grDevices,
mapproj, parallel, ClimProjDiags, stats, plyr, ncdf4, NbClust,
multiApply (>= 2.1.1), SpecsVerification (>= 0.5.0), easyNCDF
abind, bigmemory, graphics, grDevices, mapproj, parallel,
ClimProjDiags, stats, plyr, ncdf4, NbClust, multiApply (>=
2.1.1), SpecsVerification (>= 0.5.0), easyNCDF
abind, bigmemory, graphics, grDevices, mapproj, parallel,
ClimProjDiags, stats, plyr, ncdf4, NbClust, multiApply (>=
2.1.1), SpecsVerification (>= 0.5.0), easyNCDF,
easyVerification
abind, bigmemory, graphics, grDevices, maps, mapproj, methods,
parallel, ClimProjDiags, stats, plyr, ncdf4, NbClust,
multiApply (>= 2.1.1), SpecsVerification (>= 0.5.0), easyNCDF,
easyVerification
abind, bigmemory, GEOmap, geomapdata, mapproj, NbClust, ncdf4,
parallel, plyr, SpecsVerification (>= 0.5.0)
ncdf4, GEOmap, geomapdata, mapproj, abind, parallel,
bigmemory, SpecsVerification, plyr
poLCA, R.oo (>= 1.20.0), R.methodsS3, mclust, igraph (>=
1.0.1), Rcpp (>= 0.12.3), combinat, flexmix, hash
ggplot2, glasso, mvtnorm, stats, tidyr, utils, zoo
survival, rms, foreach, ggplot2, flextable, plotROC, icenReg,
RISCA, thregI
car, MASS, parallel, pbapply, plotrix, rgl
car, ks, MASS, Matrix, parallel, pbapply, plotrix, rgl
car, ggplot2, ks, MASS, Matrix, parallel, pbapply, plotrix,
rgl
clickR, future, future.apply, ggplot2, ggrepel, ks, MASS,
Matrix, pbapply
DESeq2, futile.logger, ggplot2, ggsci, plyr, VennDiagram
sf, entropy, tidyr, dplyr, rlang, tibble
dplyr, entropy, raster, rlang, sf, tibble, tidyr
PDQutils (>= 0.1.1), hypergeo, orthopolynom
MASS, methods, graphics, grDevices, VGAM, poilog, GUILDS
stats, utils, magic, MASS, corpcor, progress, fpc
stringr, coda, rjags, stats, grDevices, graphics
stringr, coda, rjags, stats, grDevices, graphics, nimble,
CARBayesdata, MASS
stringr, coda, rjags, stats, nimble, CARBayesdata, MASS,
grDevices, graphics
rjags, coda, stringr, stats, grDevices, graphics, data.table,
utils
assertthat, ggplot2, Matrix, magrittr, MASS, modules, memoise,
Rcpp, spdep
assertthat, ggplot2, Matrix, magrittr, MASS, modules, memoise,
pbapply, Rcpp, spdep
dplyr(>= 0.2), functional, ggplot2, grDevices, MASS, utils,
spdep, stats, parallelMap
dplyr (>= 0.2), functional, ggplot2, grDevices, MASS, utils,
spdep, stats, parallelMap, tibble
dplyr(>= 0.2), ggplot2, MASS, spdep, parallel
dplyr(>= 0.2), functional, ggplot2, MASS, spdep, parallelMap
nlme, emdi, stats, sfsmisc, parallelMap, MuMIn, ggplot2,
moments, openxlsx, reshape2, HLMdiag, gridExtra, stringr,
readODS
graphics, stats, methods, gridExtra, ggplot2, grid, rlang
readxl, jsonlite, chron, curl, sf, igraph
readxl, jsonlite, chron, curl, sf, httr, igraph
dplyr, DT, Tplyr, ggplot2, rlang, shiny, knitr, RColorBrewer,
stringr, forcats, Tendril, kableExtra, huxtable, pharmaRTF
dplyr, DT, forcats, ggplot2, htmlwidgets, huxtable, jsonlite,
pharmaRTF, plotly, purrr, RColorBrewer, rlang, shiny, stringr,
Tendril, Tplyr
dplyr, htmlwidgets, purrr, stringr, jsonlite, shiny, magrittr,
DT, shinyjs, rmarkdown, rlang
dplyr, htmlwidgets, purrr, stringr, jsonlite, shiny, magrittr,
DT, shinyjs, rmarkdown, rlang, tibble, utils, haven,
shinyWidgets, tidyr
dplyr, htmlwidgets, purrr, stringr, jsonlite, shiny, magrittr,
DT, shinyjs, rmarkdown, rlang, tibble, utils, haven,
shinyWidgets, tidyr, shinybusy
methods, httr, dplyr, xml2, XML, jsonlite, purrr, readr,
lubridate
stats, mvtnorm, dplyr, smotefamily, e1071, ranger, pROC, FNN
impute, matrixStats, shiny, shinyFiles, openxlsx, GSA
sf, ggplot2, gridExtra, geodetector, caret, lwgeom, tools,
dplyr
Rcpp, assertthat, glue, lifecycle, rlang, vctrs
plyr, dplyr, widyr, stringr, tidytext, twitteR, purrr, tidyr,
igraph, maps, ggplot2, ggraph, scales, reshape2, lubridate,
utils, stats, magrittr, ldatuning, topicmodels
dplyr, widyr, stringr, tidytext, rtweet, tidyr, igraph,
ggplot2, ggraph, scales, reshape2, lubridate, utils, stats,
magrittr, ldatuning, topicmodels
ifultools (>= 2.0-0), splus2R (>= 1.2-0), methods
ifultools (>= 2.0-22), splus2R (>= 1.3-3), methods
dplyr, furrr, ggplot2, glue, lubridate, magrittr, methods,
purrr, rlang, stats, stringr, tibble, tibbletime, tidyr, utils
assertthat, dplyr, furrr, ggplot2, glue, lubridate, magrittr,
methods, purrr, rlang, stats, stringr, tibble, tidyr
stringr, lubridate, dplyr, purrr, readr, tidyr, magrittr, fs
stringr, lubridate, dplyr, purrr, readr, curl, tidyr,
magrittr, fs
stringr, lubridate, dplyr, purrr, readr, tidyr, magrittr, httr
PolynomF, ltsa, FitAR, FitARMA, portes, lagged
PolynomF, ltsa, FitAR, FitARMA, portes, lagged (>= 0.1-1),
Rdpack
methods, graphics, stats, utils, PolynomF (>= 1.0-0), Formula,
ltsa, FitARMA, lagged (>= 0.1-1), Rdpack, KFAS, Rcpp (>=
0.12.14)
methods, graphics, stats, utils, PolynomF (>= 1.0-0), Formula,
ltsa, FitARMA, lagged (>= 0.2), Rdpack, KFAS, Rcpp (>=
0.12.14), numDeriv
methods, graphics, stats, utils, PolynomF (>= 1.0-0), Formula,
ltsa, FitARMA, lagged (>= 0.2.1), Rdpack, KFAS, Rcpp (>=
0.12.14), numDeriv, dplyr
methods, graphics, stats, utils, PolynomF (>= 1.0-0), Formula,
ltsa, FitARMA, lagged (>= 0.2.1), Rdpack, KFAS, FKF, Rcpp (>=
0.12.14), numDeriv, dplyr
methods, graphics, stats, utils, PolynomF (>= 1.0-0), Formula,
FitAR, ltsa, FitARMA, lagged (>= 0.2.1), Rdpack, KFAS, FKF,
Rcpp (>= 0.12.14), numDeriv, dplyr
methods, graphics, stats, utils, PolynomF (>= 1.0-0), Formula,
FitAR, ltsa, FitARMA, lagged (>= 0.2.1), Rdpack, Rcpp (>=
0.12.14), numDeriv
methods, graphics, stats, utils, PolynomF (>= 1.0-0), Formula,
lagged (>= 0.2.1), Rcpp (>= 0.12.14), Rdpack, numDeriv, ltsa
dplyr, graphics, nortest, stats, utils, crayon, cli, numDeriv
dplyr, graphics, nortest, stats, utils, crayon, cli, numDeriv,
doParallel, foreach, parallel
graphics, nortest, stats, utils, crayon, cli, numDeriv,
doParallel, foreach, parallel, AICcmodavg
xml2, parallel, processx, digest, Matrix
Rcpp, fda, mclust, matrixcalc, MASS, Matrix
digest, fs, rlang, htmltools, R6, rappdirs
fs, rlang (>= 0.4.10), htmltools (>= 0.5.1), R6, rappdirs
plyr, Rcpp (>= 0.10.3), terra, tools, stats4
ncdf4, maps, maptools, PBSmapping, grDevices, splancs, sp,
geosphere, graphics, methods, lubridate
ncdf4, maps, PBSmapping, grDevices, splancs, sp, geosphere,
graphics, methods
graphics, grDevices, utils, foreign, stringr, RColorBrewer,
stats, sp, methods, SeerMapper
Rcpp (>= 0.12.2), Matrix, discretization
Rcpp (>= 0.12.2), DiagrammeR, Matrix, discretization
magrittr, blockmodels, R6, Rcpp, ggplot2
alluvial, magrittr, dplyr, purrr, blockmodels, R6, Rcpp,
igraph, ggplot2, GREMLINS, stringr, rlang, reshape, prodlim
alluvial, magrittr, dplyr, purrr, blockmodels, R6, Rcpp,
igraph, ggplot2, GREMLINS, stringr, rlang, reshape2, prodlim
Rcpp, rlang, tidyr, dplyr, utils, stats, graphics
colorRamps, data.table, ggplot2 (>= 2.2.0), grDevices, Hmisc,
reshape2, scales, stats, stringr, utils
colorRamps, data.table, factoextra, FactoMineR, ggplot2 (>=
2.2.0), grDevices, Hmisc, reshape2, scales, stats, stringr,
utils
jsonlite, httr (>= 1.0.0), stringr, methods
jsonlite, curl, httr (>= 1.0.0), stringr, methods
jsonlite, curl, httr (>= 1.0.0), methods, mime, utils
jsonlite, curl, httr (>= 1.0.0), methods, mime, utils, cli
jsonlite, curl, httr (>= 1.0.0), methods, mime, utils, cli,
keyring
glmnet, stats, MTPS, Seurat (>= 4.0.5), harmony
sp, foreach, parallel, doSNOW, raster, fields, LiblineaR,
limma
stats, Matrix, ggplot2, umap,pheatmap,
rmarkdown,matrixStats,SummarizedExperiment, DelayedArray,
DelayedMatrixStats, HDF5Array
Matrix, methods, progress, stats, crayon, reshape2
matrixStats, foreach, doParallel, igraph, Matrix, uwot,
cluster, clusterCrit, Rcpp, RcppParallel, RcppAnnoy, methods,
torch (>= 0.3.0), RhpcBLASctl
matrixStats, foreach, doParallel, igraph, Matrix, uwot,
cluster, clusterCrit, Rcpp, RcppParallel, RcppAnnoy, methods,
torch (>= 0.3.0), RhpcBLASctl, coro
data.table, DelayedArray, future, future.apply, magrittr,
methods, Seurat (>= 4.0.0), stats, utils
Rcpp, RANN, igraph, parallel, stats, stringr
cluster, entropy, stats, utils, parallel, irlba, PINSPlus,
matrixStats, markdown
rTensor, ica, fgsea, circlize, reshape2, parallel,
ComplexHeatmap, ggplot2, mgcv, utils, Rcpp, RColorBrewer,
dplyr, edgeR, sva, stats, Rmisc, ggpubr, msigdbr, sccore, NMF
RColorBrewer, scales, ggplot2, cowplot, tibble, stringr,
tidyverse, readr, tidyr, dplyr, purrr, gtools, plyr, forcats,
easypackages, BiocStyle
ggplot2, pheatmap, graphics, Seurat, GSVA, stats, utils,
downloader, pcaMethods, grDevices, gProfileR, limSolve,
gprofiler2,
ggplot2, pheatmap, graphics, Seurat, GSVA, stats, utils,
downloader, pcaMethods, grDevices, gProfileR, limSolve,
gprofiler2, pbapply,
ggplot2, pheatmap, graphics, Seurat, GSVA, stats, utils,
downloader, pcaMethods, grDevices, gProfileR, limSolve,
gprofiler2, pbapply, ADAPTS, reshape,
dplyr, GenomicRanges, magrittr, matrixStats, mixtools, rlang,
Rsamtools, utils
Seurat, ggplot2, stringr, clustree, magrittr, Matrix, dplyr,
patchwork
ALL, ConsensusClusterPlus, scatterplot3d, ggplot2, Rtsne,
limma, edgeR, TPEA, Rmisc, lattice, plyr, ggthemes, reshape2,
PerformanceAnalytics, corrplot, Hmisc, igraph, survival
stats, dplyr, igraph, scDHA, foreach, BiocGenerics, Matrix,
SummarizedExperiment, doParallel, ggsci, psych, tibble, rlang,
SingleCellExperiment
pbapply, RSpectra, Matrix, methods, stats, utils, MASS,
scTenifoldNet
reticulate, pbapply, RSpectra, Matrix, rTensor, methods,
stats, MASS
reticulate, pbapply, RSpectra, Matrix, methods, stats, utils,
MASS
pbapply, RSpectra, Matrix, methods, stats, utils, MASS
pbapply, RSpectra, Matrix, methods, stats, utils, MASS,
RhpcBLASctl
ggplot2, Matrix, scales, assertthat, dplyr, viridis,
viridisLite, methods
RColorBrewer, stringr, dichromat, munsell (>= 0.2), plyr (>=
1.2)
RColorBrewer, stringr, dichromat, munsell (>= 0.2), plyr (>=
1.2), labeling
RColorBrewer, dichromat, munsell (>= 0.2), plyr (>= 1.2),
labeling, methods
RColorBrewer, dichromat, plyr, munsell (>= 0.2), labeling,
methods, Rcpp
RColorBrewer, dichromat, plyr, munsell (>= 0.2), labeling,
Rcpp, R6, viridisLite
labeling, munsell (>= 0.5), R6, RColorBrewer, Rcpp,
viridisLite
farver (>= 2.0.0), labeling, munsell (>= 0.5), R6,
RColorBrewer, viridisLite, lifecycle
farver (>= 2.0.3), labeling, lifecycle, munsell (>= 0.5), R6,
RColorBrewer, viridisLite
farver (>= 2.0.3), labeling, lifecycle, munsell (>= 0.5), R6,
RColorBrewer, rlang (>= 1.0.0), viridisLite
Matrix, R.matlab, protoclust, igraph, SDMTools, gam
Matrix, R.matlab, protoclust, igraph, gam
methods, stats, graphics, Matrix, splines
stats, nlme, utils, methods, graphics, car, MASS, knitr,
kableExtra, readxl, mblm
stats, nlme, utils, methods, graphics, car, knitr, kableExtra,
readxl, mblm, meta, magrittr
stats, nlme, utils, methods, graphics, car, knitr, kableExtra,
readxl, mblm, meta, magrittr, yaml
dplyr, emdbook, gamlss.dist, ismev, magrittr, methods, plyr,
purrr, Rcpp, reliaR, sets, tibble, tidyr
dplyr, emdbook, ismev, magrittr, methods, plyr, purrr, Rcpp,
reliaR, sets, tibble, tidyr
dplyr, ismev, magrittr, plyr, Rcpp, stats, sets, tibble, tidyr
ActivePathways, AdaptGauss, coop, igraph, mixtools,
reticulate, methods
ActivePathways, AdaptGauss, coop, igraph, mixtools,
reticulate, methods,compiler
jmvcore (>= 0.8.0), R6, ggplot2, cowplot, ggstance, ggridges
ggplot2, scales, grid, grDevices, graphics
ggforce, rlang, rvcheck (>= 0.1.0), tidyr, utils
ggforce, rlang, rvcheck (>= 0.1.0), stats, tidyr, utils
ggforce, rlang, rvcheck, stats, tidyr, utils
ggforce, rlang, ggfun, stats, tidyr, utils
dplyr, ggplot2, ggrepel, graphics, grDevices, igraph,
magrittr, Matrix, methods, pROC, parallel, Rcpp, rlang, scales,
tibble, utils, uwot, withr
dplyr, ggplot2, ggrepel, graphics, grDevices, igraph, irlba,
magrittr, Matrix, methods, parallel, pbmcapply, pROC, Rcpp,
rlang, scales, tibble, utils, uwot, withr
stats, readxl, rlang, dplyr, tidyselect, magrittr, lmeInfo (>=
0.3.0)
FNN, spData, sp, dplyr, parallel, optimParallel
FNN, spData, dplyr, foreach, doParallel, optimParallel
dplyr, stringr, ggplot2, magrittr, purrr, apcluster,
OpenImageR, methods
R.cache, dplyr, httr, rvest, stringr, xml2
R.cache, dplyr, httr, rvest, stringr, xml2, tidygraph, ggraph,
ggplot2
R.cache, dplyr, httr, rlang, rvest, stringr, xml2, tidygraph,
ggraph, ggplot2
dplyr, ggplot2, magrittr, stringi, stringr, tibble, tidyr,
tidytext
dplyr, formatR, glue, rlang, stringr, tidyr
Matrix, utils, stats, iterators, RCurl, zoo, graphics
Matrix, utils, stats, iterators, RCurl, zoo, graphics, digest
curl, data.table, digest, methods, openssl
dplyr, forcats, purrr, stats, stringr, tibble, tidyr,
tidyselect
dplyr, forcats, ggplot2, gghalves, purrr, stats, stringr,
tibble, tidyr, tidyselect
ape, dplyr, ggplot2, ggtree, igraph, parallelDist, patchwork,
phangorn, Rcpp, reshape2, RcppParallel, stringr, tidygraph
ape, dplyr, ggplot2, ggtree, igraph, parallelDist, patchwork,
phangorn, Rcpp, reshape2, RcppParallel, RhpcBLASctl, stringr,
tidygraph
broom, tibble, dplyr, rlang, stats, purrr
ggplot2, graph, reshape2, Rgraphviz, methods
utils, graphics, ggplot2, graph, reshape2, Rgraphviz, methods
alakazam (>= 0.2.11), shazam (>= 0.1.10), doParallel, foreach,
dplyr (>= 0.7.0), stringi, methods, stats, iterators, lazyeval
alakazam (>= 0.3.0), shazam (>= 0.2.0), doParallel, foreach,
dplyr (>= 0.8.1), Rcpp (>= 0.12.12), seqinr, data.table,
stringi, stringr, methods, stats, rlang
alakazam (>= 1.0.0), shazam (>= 1.0.0), data.table,
doParallel, dplyr (>= 0.8.1), foreach, methods, Rcpp (>=
0.12.12), rlang, scales, stats, stringi
alakazam (>= 1.0.1), shazam (>= 1.0.0), data.table,
doParallel, dplyr (>= 0.8.1), foreach, magrittr, methods, Rcpp
(>= 0.12.12), rlang, scales, stats, stringi
alakazam (>= 1.0.2), shazam (>= 1.0.1), data.table,
doParallel, dplyr (>= 0.8.1), foreach, methods, Rcpp (>=
0.12.12), rlang, scales, stats, stringi, tidyr (>= 1.0.0)
alakazam (>= 1.2.0), shazam (>= 1.1.0), data.table,
doParallel, dplyr (>= 1.0), foreach, methods, Rcpp (>=
0.12.12), rlang, scales, stats, stringi, tidyr (>= 1.0)
data.table, readr, stringr, RSQLite, memoise
data.table, readr, stringr, RSQLite, memoise, curl
data.table (>= 1.10.0), ggplot2, gridExtra
data.table (>= 1.10.0), ggplot2, gridExtra, foreach,
doParallel, parallel
data.table (>= 1.10.0), ggplot2, gridExtra, foreach,
doParallel, parallel, openxlsx
data.table (>= 1.10.0), ggplot2, gridExtra, foreach,
doParallel, parallel, openxlsx, stringi
data.table (>= 1.10.0), ggplot2, gridExtra, foreach,
doParallel, parallel, openxlsx, stringi, cli
car, e1071, gbm, partykit, randomForest, reshape2, sqldf,
stringr, stats, ggplot2, utils
discretization, sqldf, magrittr, dplyr, methods
data.table, goftest, graphics, scoringRules, stats
data.table, forcats, ggplot2, goftest, graphics, scoringRules,
stats
data.table, forcats, ggplot2, goftest, scoringRules, stats,
methods
data.table, forcats, ggplot2, goftest, graphics, scoringRules,
stats, methods
data.table, ggdist (>= 3.1.0), ggplot2, methods, rlang,
scoringRules, stats
geoR, methods, rgl, lattice, mvtnorm, MASS, graphics,
grDevices
methods, rgl, lattice, mvtnorm, MASS, graphics, grDevices
ggplot2, glmpca, Seurat, magrittr, dplyr, tidyr, purrr,
Matrix, Rdpack, SeuratObject, WGCNA, broom, stats, methods,
matrixStats
methods, stats, utils, magrittr, qlcMatrix, lazyeval
methods, stats, utils, Matrix, magrittr, qlcMatrix, lazyeval
methods, stats, utils, Matrix, magrittr, qlcMatrix,
data.table, fastmatch, lazyeval, crul, jsonlite, tibble,
hoardr, curl
cli, dplyr, glue, magrittr, methods, purrr, rlang (>= 1.0.2),
stringr, tibble
MASS, Matrix, methods, future, future.apply, ggplot2,
reshape2, gridExtra, Rcpp
MASS, Matrix, methods, future.apply, ggplot2, reshape2,
gridExtra
MASS, Matrix, methods, future.apply, future, ggplot2,
reshape2, gridExtra, matrixStats
dplyr, magrittr, MASS, Matrix, methods, future.apply, future,
ggplot2, reshape2, rlang, gridExtra, matrixStats
dplyr, magrittr, MASS, Matrix (>= 1.5.0), methods,
future.apply, future, ggplot2, reshape2, rlang, gridExtra,
matrixStats
MASS, Matrix, methods, future.apply, future, ggplot2,
reshape2, gridExtra
splines, GB2, caTools, MASS, stats, pscl, mvtnorm, mgcv,
graphics, rsvd, doParallel, parallel, BayesX
splines, GB2, MASS, stats, pscl, mvtnorm, mgcv, graphics,
doParallel, parallel
sp, rgdal, rgeos, rasterVis, tidyr, raster, dismo
methods, stats, dplyr, ggplot2, grid, car
shiny, shinyjs, shinyTree, jsonlite, rlang, data.table, cli
shiny, shinyjs, shinyTree, jsonlite, rlang, data.table, cli,
Rcpp
broom (>= 0.5.5), checkmate (>= 2.0.0), crayon (>= 1.3.4),
data.table (>= 1.12.8), mathjaxr, stats, utils
broom (>= 0.5.5), checkmate (>= 2.0.0), cli, data.table (>=
1.12.8), mathjaxr, stats, utils
car, robustbase, cluster, MASS, e1071, mclust, tcltk
car, robustbase, cluster, MASS, e1071, tcltk
car, robustbase, cluster, MASS, e1071, Rcpp
car, robustbase, cluster, MASS, e1071, R2HTML, Rcpp, Rglpk,
methods
car, robustbase, cluster, MASS, e1071, tools, Rcpp,
methods,sets
utils, stats, graphics, car, robustbase, cluster, MASS, e1071,
tools, Rcpp, methods, sets, ggplot2
utils, stats, graphics, car, rmarkdown, knitr, data.table,
xtable, robustbase, cluster, MASS, e1071, tools, Rcpp, methods,
sets, ggplot2, shiny, haven, rhandsontable, DT, shinyBS,
prettydoc
utils, stats, graphics, car, rmarkdown, knitr, data.table,
xtable, robustbase, cluster, MASS, e1071, tools, Rcpp, methods,
sets, ggplot2, shiny, haven, rhandsontable, DT, shinyBS,
prettydoc, VIM(>= 4.7.0)
utils, stats, graphics, car, carData, rmarkdown, knitr,
data.table, xtable, robustbase, cluster, MASS, e1071, tools,
Rcpp, methods, sets, ggplot2, shiny, haven, rhandsontable, DT,
shinyBS, prettydoc, VIM(>= 4.7.0)
utils, stats, graphics, car, carData, rmarkdown, knitr,
data.table, xtable, robustbase, cluster, MASS, e1071, tools,
Rcpp, methods, ggplot2, shiny (>= 1.4.0), haven, rhandsontable,
DT, shinyBS, prettydoc, VIM(>= 4.7.0)
data.table, knitr, rlang, stringr, methods, Rglpk, slam,
lpSolveAPI
data.table, knitr, rlang, stringr, methods, Rglpk, slam,
lpSolveAPI, glpkAPI, progress, utils
data.table, knitr, rlang, stringr, methods, Rglpk, slam,
glpkAPI, progress, utils, Matrix, SSBtools
data.table, knitr, rlang, stringr, methods, Rglpk, slam,
glpkAPI, progress, utils, Matrix (>= 1.3-0), SSBtools
R.utils (>= 2.4.0), stats, utils, raster, rgdal
rscala (>= 2.5.0), commonsMath (>= 1.1), stats
rscala (>= 3.0.2), commonsMath (>= 1.1), stats
rscala (>= 3.2.14), commonsMath (>= 1.2.3), stats
rscala (>= 3.2.3), commonsMath (>= 1.2), stats
Rcpp (>= 1.0.5), rCMA, matrixcalc, rJava, Matrix
numDeriv, PolynomF, rootSolve, utils, stats
numDeriv, PolynomF (>= 2.0-0), rootSolve, utils, stats
crul (>= 0.4.0), jsonlite, ggplot2, grid, scales, sp, rgdal,
maps, wicket (>= 0.4.0)
methods, magrittr(>= 1.5), stringi(>= 0.4.1)
magrittr, quantmod, dygraphs, plotrix, htmltools, grDevices,
graphics, zoo
shinydashboard (>= 0.5.3), dygraphs (>= 1.1.1.3), openxlsx,
xtable, xts, zoo
shinydashboard (>= 0.5.3), shiny (>= 0.14), dygraphs (>=
1.1.1.3), htmlwidgets, openxlsx, xtable, xts, zoo
xts, zoo, forecast, stats, graphics, utils
abind, graphics, grDevices, MASS, utils, parallel, nlme, sp,
mgcv, raster, stats
abind, MASS, utils, parallel, nlme, sp, mgcv, raster
abind, graphics, grDevices, MASS, utils, parallel, nlme, sp,
mgcv, raster, stats, tools
abind, graphics, grDevices, MASS, utils, parallel, nlme, sp,
mgcv, raster, stats, tools, stringr
abind, graphics, grDevices, MASS, utils, parallel, nlme, sp,
mgcv, raster, stats, tools, stringr, Rcpp (>= 0.12.14),
RcppParallel
abind, graphics, grDevices, MASS, utils, parallel, nlme, sp,
mgcv, raster, stats, tools, stringr, Rcpp (>= 0.12.14),
RcppParallel, RcppNumerical
abind, graphics, grDevices, MASS, utils, parallel, nlme, sp,
mgcv, raster, stats, tools, stringr, Rcpp (>= 0.12.14),
RcppParallel (>= 5.1.1), RcppNumerical
abind, graphics, grDevices, MASS, utils, parallel, nlme, sf,
mgcv, raster (>= 3.5-15), stats, terra (>= 1.5-12), tools,
stringr, Rcpp (>= 0.12.14), RcppParallel (>= 5.1.1),
RcppNumerical
abind, graphics, grDevices, MASS, utils, parallel, nlme, sf,
mgcv, raster (>= 3.5-15), terra (>= 1.5-12), stats, tools,
stringr, Rcpp (>= 0.12.14), RcppParallel (>= 5.1.1),
RcppNumerical
abind, graphics, grDevices, MASS, mgcv, nlme, parallel, raster
(>= 3.5-15), Rcpp (>= 0.12.14), RcppNumerical, RcppParallel (>=
5.1.1), sf, stats, stringr, terra (>= 1.5-12), tools, utils
assertthat, openssl, rprojroot, curl, jsonlite
stringr, tidyr, dplyr, magrittr, testthat, rlang
parallel, maptools, MASS, methods, rgdal
parallel, maptools, MASS, methods, rgdal, sp, igraph
utils, DDD (> 3.0), ape, foreach, doParallel, apTreeshape,
phylobase, geiger, deSolve
utils, DDD (>= 4.0), ape, foreach, doParallel, apTreeshape,
phylobase, geiger, deSolve
haven (>= 2.2.0), igraph, readr, readxl, tcltk, stringr,
tibble, magrittr, purrr, tidyr, dplyr, rlang, lubridate
haven (>= 2.2.0), readr, readxl, stringr, tibble, magrittr,
purrr, tidyr, dplyr, rlang, lubridate
stats, mvtnorm, dplyr, tidyr, ggplot2, shiny, readr, rlang
dplyr, ggplot2, ggridges, grid, gridExtra, insight, magrittr,
rlang, scales
bayestestR, dplyr, ggplot2, ggridges, grid, gridExtra,
insight, magrittr, rlang, scales
bayestestR, dplyr, effectsize, ggplot2, ggridges, grid,
gridExtra, insight, magrittr, parameters, rlang, scales
bayestestR, dplyr, effectsize, ggplot2, ggridges, insight,
magrittr, parameters, rlang
bayestestR, dplyr, effectsize, ggplot2, ggridges, insight,
magrittr, parameters (>= 0.13.0), rlang
bayestestR, effectsize, ggplot2, ggridges, insight, parameters
(>= 0.13.0), rlang
bayestestR, datawizard (>= 0.2.0), effectsize, ggplot2 (>=
3.3.5), ggridges, insight, parameters (>= 0.13.0), rlang
dplyr, crayon, purrr, stringr, rstudioapi, magrittr, ggplot2
dplyr, crayon, purrr, stringr, rstudioapi, magrittr, ggplot2,
fansi
data.table (>= 1.13), binom (>= 1.1), graphics, grDevices,
stats
drc, ggplot2, car, crayon, emmeans, multcomp, hnp, boot,
multcompView
drc, ggplot2, car, crayon, emmeans, multcomp, hnp, boot,
multcompView, stringr
drc, ggplot2, car, crayon, emmeans, multcomp, hnp, boot,
multcompView, stringr, sf, gridExtra, dplyr
deSolve (>= 1.20), pracma (>= 2.1.4), Deriv (>= 3.8.4),
Ryacas, stats, graphics, methods, mvtnorm, matrixStats,
statmod, coda, MASS, ggplot2, tidyr, dplyr, Hmisc, R.utils,
callr
stats, urca, forecast (>= 8.3), tsfeatures, dplyr, magrittr,
randomForest, Mcomp, forecTheta, stringr, tibble, purrr,
ForeCA, future, furrr, utils, repmis
stats, urca, forecast (>= 8.3), dplyr, magrittr, randomForest,
forecTheta, stringr, tibble, purrr, future, furrr, utils,
tsfeatures, MASS
stats, urca, forecast (>= 8.3), dplyr, magrittr, randomForest,
forecTheta, stringr, tibble, purrr, future, furrr, utils,
tsfeatures
graphics, grDevices, stats, utils, tuneR
graphics, grDevices, stats, utils, tuneR, methods
Rcpp (>= 0.12.12), foreach, iterators, doParallel, fGarch,
corpcor, mvtnorm, methods
RColorBrewer (>= 1.1-2), dplyr (>= 0.5.0), plyr (>= 1.8.4),
reshape2 (>= 1.4.1), ggplot2(>= 2.1.0), magrittr, Rcpp, zoo,
grDevices, graphics, stats, utils, scales
RColorBrewer (>= 1.1-2), dplyr (>= 1.0.0), plyr (>= 1.8.4),
reshape2 (>= 1.4.1), ggplot2(>= 2.1.0), magrittr, Rcpp, zoo,
grDevices, graphics, stats, utils, scales, rlang, methods, cli
Rcpp (>= 0.11.0), utils, stats, grDevices, graphics
Rcpp (>= 0.11.0), utils, stats, grDevices, graphics, plyr
DBI, RSQLite, magrittr, tibble, purrr, utils, dplyr
DBI, dplyr, RPostgreSQL, rvest, stringi, XML
DBI, dplyr, RPostgreSQL, rvest, stringi, XML, xml2
DBI, dplyr, tidyr, cluster, factoextra, RPostgreSQL, rvest,
stringi, XML, xml2
ape, deSolve, nloptr, nnet, data.table, expm, MASS, Matrix,
methods, parallel, phangorn, seqinr, statmod, zoo, RColorBrewer
ape, deSolve, nloptr, nnet, data.table, expm, MASS, Matrix,
methods, parallel, phangorn, seqinr, statmod, zoo,
RColorBrewer, GenSA
Rcpp (>= 1.0.3), methods, graphics, stats, utils
matrixcalc, MASS, boot, mi (>= 0.9-99), utils
matrixcalc, MASS, boot, mi (>= 0.9-99), tcltk, DiagrammeR
lavaan (>= 0.5-11), sem (>= 3.1-0), MplusAutomation (>=
0.5-3), plyr, methods, XML, igraph (>= 0.6-3), lisrelToR,
rockchalk
qgraph (>= 1.2.2), lavaan (>= 0.5-11), sem (>= 3.1-0), plyr,
methods, XML, igraph (>= 0.6-3), lisrelToR, rockchalk,
colorspace, corpcor
qgraph (>= 1.2.3), lavaan (>= 0.5-11), sem (>= 3.1-0), plyr,
XML, igraph (>= 0.6-3), lisrelToR, rockchalk, colorspace,
corpcor, methods
qgraph (>= 1.2.4), lavaan (>= 0.5-11), sem (>= 3.1-0), plyr,
XML, igraph (>= 0.6-3), lisrelToR, rockchalk, colorspace,
corpcor, methods
qgraph (>= 1.2.4), lavaan (>= 0.5-11), sem (>= 3.1-0), plyr,
XML, igraph (>= 0.6-3), lisrelToR, rockchalk, colorspace,
corpcor, methods, semTools, OpenMx, regsem
qgraph (>= 1.2.4), lavaan (>= 0.5-11), sem (>= 3.1-0), plyr,
XML, igraph (>= 0.6-3), lisrelToR, rockchalk, colorspace,
corpcor, methods, OpenMx, regsem
qgraph (>= 1.2.4), lavaan (>= 0.5-11), sem (>= 3.1-0), plyr,
XML, igraph (>= 0.6-3), lisrelToR, rockchalk, colorspace,
corpcor, methods, OpenMx
qgraph (>= 1.2.4), lavaan (>= 0.5-11), sem (>= 3.1-0), plyr,
XML, igraph (>= 0.6-3), lisrelToR, rockchalk, colorspace,
corpcor, methods, semTools, OpenMx
stats, utils, kutils, xtable, lavaan, plyr, stationery
utils, shiny (>= 0.12.1), shiny.semantic (>= 0.1.2)
utils, shiny (>= 0.12.1), shiny.semantic (>= 0.1.2),
htmltools, glue
utils, shiny (>= 0.12.1), shiny.semantic (>= 0.3.3),
htmltools, glue
utils, shiny (>= 0.12.1), shiny.semantic (>= 0.3.3),
htmltools, glue, checkmate
ggplot2, survival, stats, twang, graphics, fastGHQuad, Rcpp
parallel, lavaan, glue, knitr, testthat, rmarkdown, DiagrammeR
(>= 1.0.6), DiagrammeRsvg (>= 0.1), webp
jsonlite, lubridate, leaflet, magrittr, urlshorteneR
jsonlite, lubridate, parsedate, leaflet, urlshorteneR
lavaan, Matrix, parallel, MASS, stats, methods
bitops, sets, digest, rpart, rpart.plot, parallel
bitops, sets, digest, rpart, rpart.plot, parallel, plotrix,
cluster
bitops, sets, digest, rpart, rpart.plot, parallel, plotrix,
cluster, stringr
bitops, sets, digest, rpart, rpart.plot (>= 3.0.6), parallel,
plotrix, cluster, stringr, matrixcalc, expm, ggplot2, tidyr,
matrixStats, methods, MASS, mvtnorm
bitops, sets, digest, rpart, rpart.plot (>= 3.0.6), parallel,
plotrix, cluster, stringr, lavaan, expm, ggplot2, viridis,
tidyr, methods, strucchange, sandwich, zoo, crayon, clisymbols,
testthat
bitops, sets, digest, rpart, rpart.plot (>= 3.0.6), plotrix,
cluster, stringr, lavaan, ggplot2, tidyr, methods, strucchange,
sandwich, zoo, crayon, clisymbols, future.apply
bitops, sets, digest, rpart, rpart.plot (>= 3.0.6), plotrix,
cluster, stringr, lavaan, ggplot2, tidyr, methods, strucchange,
sandwich, zoo, crayon, clisymbols, future.apply, data.table
reticulate, methods, digest, magrittr, sf, stars, data.table,
raster, XML, jsonlite, geojsonio, leaflet, leaflet.extras,
mapedit, shiny, shinyFiles, shinydashboard, shinyjs,
shinyWidgets, foreach, parallel, doParallel, units, httr
reticulate, methods, magrittr, sf, stars, data.table, raster,
XML, jsonlite, geojsonio, leaflet, leaflet.extras, mapedit,
shiny, shinyFiles, shinydashboard, shinyjs, shinyWidgets,
foreach, parallel, doParallel, units, httr
methods, rgdal, sf, stars, data.table, raster, XML, jsonlite,
geojsonio, leaflet, leaflet.extras, mapedit, shiny, shinyFiles,
shinydashboard, shinyjs, shinyWidgets, foreach, parallel,
doParallel, units, tools, httr
methods, sf, stars, data.table, raster, XML, jsonlite,
geojsonio, leaflet, leaflet.extras, mapedit, shiny, shinyFiles,
shinydashboard, shinyjs, shinyWidgets, foreach, parallel,
doParallel, units, tools, httr
methods, sf, stars, data.table, raster, XML, jsonlite,
geojsonio, leaflet, leaflet.extras, mapedit, shiny, shinyFiles,
shinydashboard, shinyjs, shinyWidgets, foreach, parallel,
doParallel, httr
methods, sf, stars, data.table, raster, XML, jsonlite,
geojsonio, leaflet, leaflet.extras, mapedit, shiny, shinyFiles,
shinydashboard, shinyjs, shinyWidgets, foreach, parallel,
doParallel, httr, RcppTOML
methods, sf (>= 0.9.2), stars (>= 0.4.1), data.table, raster,
rgdal, XML, jsonlite, geojsonio, leaflet, leaflet.extras,
mapedit, shiny, shinyFiles, shinydashboard, shinyjs,
shinyWidgets, foreach, parallel, doParallel, httr, RcppTOML
methods, sf (>= 0.9.2), stars (>= 0.4.1), data.table, raster,
rgdal, XML, jsonlite, geojsonio, foreach, parallel, doParallel,
httr, RcppTOML
magrittr, httr, jsonlite, usethis, tidyr, tibble, glue, clipr,
crayon, desc, rlang, clisymbols, base64enc, dplyr, fs, stringr
magrittr, httr, jsonlite, usethis, cli, tibble, base64enc,
dplyr, fs, emayili (>= 0.7)
magrittr, httr, jsonlite, usethis, cli, base64enc, emayili (>=
0.7)
magrittr, httr, jsonlite, usethis, cli, base64enc, emayili (>=
0.7), keyring
RSQLite, data.table, readxl, magrittr, xfun, stringr,
DescTools, parsedate, shiny, shinydashboard, htmltools, DT,
dplyr, ggplot2, Hmisc, haven, plotly, cicerone, reticulate,
sjlabelled
boot, numbers, methods, ggplot2, Rcpp, foreach
boot, numbers, methods, ggplot2, Rcpp, foreach, dtwclust
ggplot2, relaimpo, splitstackshape, ggrepel, stringi, plotly
lattice, emdist, rgdal, FNN, graphics, conf.design, automap,
genalg
data.table (>= 1.12.8), jsonlite, reticulate (>= 1.16),
roperators (>= 1.2.0), stats, tensorflow (>= 2.2.0), tfhub (>=
0.8.0), utils, xgboost
data.table, ggplot2, graphics, grid, methods, stats, stringi,
syuzhet, utils
data.table, ggplot2, graphics, grid, lexicon (>= 0.2.0),
methods, stats, stringi, syuzhet, textclean (>= 0.3.1), utils
data.table, ggplot2, graphics, grid, lexicon (>= 0.4.1),
methods, stats, stringi, syuzhet, textclean (>= 0.3.1),
textshape (>= 1.3.0), utils
data.table, ggplot2, graphics, grid, lexicon (>= 0.7.4),
methods, stats, stringi, syuzhet, textclean (>= 0.6.1),
textshape (>= 1.3.0), utils
data.table, ggplot2, graphics, grid, lexicon (>= 1.0.0),
methods, stats, stringi, syuzhet, textclean (>= 0.6.1),
textshape (>= 1.3.0), utils
data.table, ggplot2, graphics, grid, lexicon (>= 1.2.1),
methods, stats, stringi, syuzhet, textclean (>= 0.6.1),
textshape (>= 1.3.0), utils
utils, stats, quanteda, sentimentr, stringi, zoo, abind,
glmnet, caret, compiler, Rcpp (>= 0.12.13), RcppRoll, ggthemes,
ISOweek, MCS
utils, stats, quanteda, stringi, zoo, abind, glmnet, caret,
compiler, Rcpp (>= 0.12.13), RcppRoll, ggthemes, ISOweek, MCS
utils, stats, quanteda, stringi, zoo, abind, glmnet, caret,
compiler, Rcpp (>= 0.12.13), RcppRoll, ggthemes, ISOweek, MCS,
ggplot2, parallel, foreach, doParallel
abind, caret, compiler, foreach, ggplot2, glmnet, ISOweek,
quanteda, Rcpp (>= 0.12.13), RcppRoll, RcppParallel, stats,
stringi, utils, zoo
caret, compiler, foreach, ggplot2, glmnet, ISOweek, quanteda,
Rcpp (>= 0.12.13), RcppRoll, RcppParallel, stats, stringi,
utils
caret, compiler, data.table, foreach, ggplot2, glmnet,
ISOweek, quanteda, Rcpp (>= 0.12.13), RcppRoll, RcppParallel,
stats, stringi, utils
Rcpp (>= 1.0.4.6), methods, quanteda (>= 3.2.0), data.table
(>= 1.13.6), foreach, future, doFuture, doRNG, RcppHungarian
Rcpp (>= 1.0.4.6), methods, quanteda (>= 3.2.0), data.table
(>= 1.13.6), RcppHungarian
httr, jsonlite, stringr, stats, tibble, uuid
jsonlite, httr, rvest, stringr, XML, robotstxt, igraph, RCurl,
dplyr, readr, digest, xml2, utils
dplyr (>= 0.7.4), rlang (>= 0.1.4), dbplyr, DBI, RSQLite,
datasets
dplyr (>= 0.7.4), rlang, dbplyr, DBI, RSQLite
dplyr (>= 0.8.5), rlang, tidyr, datasets
gridBase, igraph, Matrix, nloptr, numDeriv, Rcpp (>= 0.11.3),
TraMineR (>= 1.8-8), graphics, grDevices, grid, methods, stats,
utils
Matrix, Rcpp (>= 1.0.4), RcppParallel (>= 5.1.2), rlang, slam
Rcpp (>= 1.0.2), geepack, mvtnorm, nnet, VGAM, MASS, foreach,
stats
assertthat, irlba, sva, pdist, matchingR, clue, cate
Amelia, rms, stringr, TraMineR, cluster, swfscMisc, plyr,
dplyr, dfidx, mice, foreach, parallel, doRNG, doSNOW, ranger,
mlr, nnet
Biostrings, GenomicAlignments, GenomicRanges, IRanges,
magrittr, muscle, Rsamtools, utils
pbapply, squash, iotools, readr, seqminer, copynumber
TSP, grid, cluster, gclus, colorspace, MASS
TSP, grid, cluster, gclus, colorspace, MASS, gplots, registry
TSP, grid, cluster, gclus, colorspace, MASS, gplots, registry,
methods, stats, grDevices
TSP, qap, grid, cluster, gclus, colorspace, MASS, gplots,
registry, methods, stats, grDevices
TSP, qap, grid, cluster, gclus, dendextend, colorspace, MASS,
gplots, registry, methods, stats, grDevices
stats, grDevices, grid, TSP, qap, cluster, gclus, dendextend,
colorspace, MASS, gplots, registry
stats, grDevices, grid, TSP, qap, cluster, gclus, colorspace,
MASS, registry
stats, grDevices, grid, TSP, qap, cluster, gclus, colorspace,
MASS, ca, registry
mime (>= 0.2), httpuv (>= 1.4.0), xfun, jsonlite
mime (>= 0.2), httpuv (>= 1.5.2), xfun, jsonlite
mime (>= 0.2), httpuv (>= 1.3.2), jsonlite
mime (>= 0.2), httpuv (>= 1.3.2), xfun, jsonlite
utils, stats, graphics, grid, methods, Rcpp, DBI
utils, stats, tools, graphics, grid, methods, Rcpp, DBI
utils, stats, tools, graphics, grDevices, grid, methods, Rcpp,
DBI, units (>= 0.4)
utils, stats, tools, graphics, grDevices, grid, methods, Rcpp,
DBI, units (>= 0.4), magrittr
utils, stats, tools, graphics, grDevices, grid, methods, Rcpp,
DBI (>= 0.5), units (>= 0.4), magrittr
utils, stats, tools, graphics, grDevices, grid, methods, Rcpp,
DBI (>= 0.5), units (>= 0.4-6), magrittr
utils, stats, tools, graphics, grDevices, grid, Rcpp, DBI (>=
0.5), units (>= 0.4-6), classInt, magrittr
utils, stats, tools, graphics, grDevices, grid, Rcpp, DBI (>=
0.5), units (>= 0.4-6), pillar, classInt, magrittr
utils, stats, tools, graphics, grDevices, grid, Rcpp,
RPostgreSQL, DBI (>= 0.8), units (>= 0.5-1), classInt, magrittr
utils, stats, tools, graphics, grDevices, grid, Rcpp, DBI (>=
0.8), units (>= 0.5-1), classInt, magrittr
classInt (>= 0.2-1), DBI (>= 0.8), graphics, grDevices, grid,
magrittr, Rcpp, stats, tools, units (>= 0.6-0), utils
classInt (>= 0.2-1), DBI (>= 0.8), graphics, grDevices, grid,
magrittr, Rcpp (>= 0.12.18), stats, tools, units (>= 0.6-0),
utils
classInt (>= 0.4-1), DBI (>= 0.8), graphics, grDevices, grid,
magrittr, Rcpp (>= 0.12.18), stats, tools, units (>= 0.6-0),
utils
classInt (>= 0.4-1), DBI (>= 0.8), graphics, grDevices, grid,
magrittr, Rcpp (>= 0.12.18), s2 (>= 1.0.5), stats, tools, units
(>= 0.6-0), utils
classInt (>= 0.4-1), DBI (>= 0.8), graphics, grDevices, grid,
magrittr, Rcpp (>= 0.12.18), s2 (>= 1.0.7), stats, tools, units
(>= 0.6-0), utils
classInt (>= 0.4-1), DBI (>= 0.8), graphics, grDevices, grid,
magrittr, Rcpp (>= 0.12.18), s2 (>= 1.0.7), stats, tools, units
(>= 0.7-0), utils
classInt (>= 0.4-1), DBI (>= 0.8), graphics, grDevices, grid,
magrittr, Rcpp (>= 0.12.18), s2 (>= 1.1.0), stats, tools, units
(>= 0.7-0), utils
dplyr, emdbook, fBasics, Formula, gsl, marqLevAlg, MASS,
maxLik, methods, moments, nleqslv, numDeriv, primes, qrng,
randtoolbox, trustOptim, ucminf
dplyr, methods, RTriangle, sf, sp, tibble
ggplot2, rlang, sf, SpatialKDE, spdep, tibble
crayon, dplyr, graphics, igraph, lwgeom, rlang, sf, sfheaders,
tibble, tidygraph, units, utils
RSelenium, RCurl, qdapRegex, dplyr, stringr, data.table, plyr,
utils
ggplot2, MASS, methods, Rcpp (>= 0.11.3)
ggplot2, MASS, methods, Rcpp (>= 0.11.3), stats
ssym, robustloggamma, Formula, survival, methods, graphics,
stats
Formula, survival, methods, graphics, stats, AdequacyModel,
ggplot2, moments, gridExtra, pracma, progress, Rcpp, plot3D,
TeachingSampling
ssym, robustloggamma, Formula, survival, methods, graphics,
stats, AdequacyModel
ssym, robustloggamma, Formula, survival, methods, graphics,
stats, AdequacyModel, ggplot2, moments, gridExtra
ssym, Formula, survival, methods, graphics, stats,
AdequacyModel, ggplot2, moments, gridExtra, pracma
Formula, survival, methods, graphics, stats, AdequacyModel,
ggplot2, moments, gridExtra, pracma
Formula, survival, methods, stats, AdequacyModel, ggplot2,
plotly, moments, gridExtra, pracma, progress, Rcpp, plot3D,
magrittr, TeachingSampling
dplyr, ggplot2, sf, terra, tidyr, clhs, SamplingBigData,
BalancedSampling, spatstat.geom
rscala (>= 3.0.2), commonsMath (>= 1.1), sdols (>= 1.6), stats
rscala (>= 3.2.3), commonsMath (>= 1.2), sdols (>= 1.7), stats
gplots, jpeg, pixmap, wavethresh, methods, vegan, MASS
plotrix, jpeg, pixmap, wavethresh, methods, vegan, MASS
stats, data.table, Rcpp (>= 0.12.15), condMVNorm, mvnfast,
Matrix
ggbeeswarm, ggfittext (>= 0.8.0), gggenes, ggplot2 (>= 3.0.0),
ggrepel, grid, rlang (>= 0.3.0), stats, utils, xgboost
classInt, graphics, raster, spatstat, stats, utils
classInt, graphics, raster, spatstat, stats, utils, Rcpp
classInt, graphics, grDevices, raster, spatstat, stats, utils,
Rcpp
classInt, graphics, grDevices, methods, raster, spatstat,
stats, utils, Rcpp
classInt, graphics, grDevices, methods, raster, spatstat.core,
spatstat.geom, stats, utils, Rcpp
classInt, graphics, grDevices, methods, raster, spatstat.core,
spatstat.geom, stats, utils
classInt, graphics, grDevices, methods, raster, spatstat.core,
spatstat.geom, spatstat.random, stats, utils
classInt, graphics, grDevices, methods, spatstat.core,
spatstat.geom, spatstat.random, stats, terra, utils
classInt, graphics, grDevices, methods, spatstat.explore,
spatstat.model, spatstat.geom, spatstat.random, stats, terra,
utils
glassoFast (>= 1.0.0), glmnet, grDevices, huge, igraph, MASS,
mclust, parallel, Rdpack, withr (>= 2.4.0)
igraph, cluster, lattice, latticeExtra, vegan, sp, reshape2,
Hmisc, scales, circular, RColorBrewer, plyr
aqp, ape, soilDB, igraph, cluster, lattice, latticeExtra,
vegan, sp, reshape2, Hmisc, scales, circular, RColorBrewer,
plyr
grDevices, graphics, methods, stats, utils, aqp, ape, soilDB,
igraph, cluster, lattice, latticeExtra, vegan, sp, reshape2,
Hmisc, scales, circular, RColorBrewer, plyr, digest
grDevices, graphics, methods, stats, utils, aqp, ape, soilDB,
cluster, lattice, vegan, sp, reshape2, Hmisc, scales, circular,
RColorBrewer, plyr, digest, e1071, stringi, parallel, curl,
grid
grDevices, graphics, methods, stats, utils, aqp, ape, soilDB,
igraph, cluster, lattice, latticeExtra, vegan, sp, reshape2,
Hmisc, scales, circular, RColorBrewer, plyr, digest, e1071,
stringi, parallel
grDevices, graphics, methods, stats, utils, aqp, ape, soilDB,
igraph, cluster, lattice, vegan, sp, reshape2, Hmisc, scales,
circular, RColorBrewer, plyr, digest, e1071, stringi, parallel,
curl, grid
grDevices, graphics, methods, stats, utils, aqp, ape, soilDB,
igraph, cluster, lattice, vegan, sp, reshape2, Hmisc, scales,
circular, RColorBrewer, plyr, digest, e1071, stringi, parallel,
curl
FNN, pdist, Matrix, grDevices, base, Ryacas, rmarkdown,
pracma, graphics
FNN, pdist, slam, grDevices, base, Ryacas, rmarkdown, pracma,
graphics
FNN, pdist, slam, grDevices, Ryacas, rmarkdown, pracma,
graphics
FNN, pdist, slam, grDevices, Ryacas, rmarkdown, pracma, e1071,
graphics, NMF, stats
alakazam (>= 0.2.11), ape, diptest, doParallel, dplyr (>=
0.5.0), foreach, graphics, grid, igraph, iterators, kedd,
KernSmooth, lazyeval, MASS, methods, parallel, progress,
SDMTools, scales, seqinr, stats, tidyr, utils
data.table (>= 1.9.4), doParallel, dplyr, foreach, graphics,
grid, iterators, methods, lazyeval, parallel, SDMTools, scales,
seqinr, stats, stringi, tidyr, utils
alakazam (>= 0.2.4), ape, data.table (>= 1.9.4), doParallel,
dplyr, foreach, graphics, grid, igraph, iterators, methods,
lazyeval, parallel, SDMTools, scales, seqinr, stats, stringi,
tidyr, utils
alakazam (>= 0.2.6), ape, data.table (>= 1.9.4), doParallel,
dplyr, foreach, graphics, grid, igraph, iterators, kedd,
KernSmooth, methods, lazyeval, parallel, SDMTools, scales,
seqinr, stats, stringi, tidyr, utils
alakazam (>= 0.2.6), ape, doParallel, dplyr (>= 0.5.0),
foreach, graphics, grid, igraph, iterators, kedd, KernSmooth,
methods, lazyeval, parallel, SDMTools, scales, seqinr, stats,
stringi, tidyr, utils
alakazam (>= 0.2.6), ape, diptest, doParallel, dplyr (>=
0.5.0), foreach, graphics, grid, igraph, iterators, kedd,
KernSmooth, lazyeval, MASS, methods, parallel, progress,
SDMTools, scales, seqinr, stats, stringi, tidyr, utils
alakazam (>= 0.2.10), ape, diptest, doParallel, dplyr (>=
0.5.0), foreach, graphics, grid, igraph, iterators, kedd,
KernSmooth, lazyeval, MASS, methods, parallel, progress,
SDMTools, scales, seqinr, stats, tidyr, utils
alakazam (>= 0.3.0), ape, diptest, doParallel, dplyr (>=
0.8.1), foreach, graphics, grid, igraph, iterators, kedd,
KernSmooth, lazyeval, MASS, methods, parallel, progress, rlang,
SDMTools, scales, seqinr, stats, tidyr, utils
alakazam (>= 0.3.0), ape, diptest, doParallel, dplyr (>=
0.8.1), foreach, graphics, grid, igraph, iterators, kedd,
KernSmooth, lazyeval, MASS, methods, parallel, progress, rlang,
scales, seqinr, stats, tidyr, utils
alakazam (>= 1.0.0), ape, diptest, doParallel, dplyr (>=
0.8.1), foreach, graphics, grid, igraph, iterators, kedd,
KernSmooth, lazyeval, MASS, methods, parallel, progress, rlang,
scales, seqinr, stats, stringi (>= 1.1.3), tidyr, tidyselect,
utils
alakazam (>= 1.0.2), ape, diptest, doParallel, dplyr (>=
0.8.1), foreach, graphics, grid, igraph, iterators, kedd,
KernSmooth, lazyeval, MASS, methods, parallel, progress, rlang,
scales, seqinr, stats, stringi (>= 1.1.3), tidyr, tidyselect,
utils
alakazam (>= 1.1.0), ape, diptest, doParallel, dplyr (>=
0.8.1), foreach, graphics, grid, igraph, iterators, kedd,
KernSmooth, lazyeval, MASS, methods, parallel, progress, rlang,
scales, seqinr, stats, stringi (>= 1.1.3), tidyr, tidyselect,
utils
alakazam (>= 1.1.0), ape, diptest, doParallel, dplyr (>=
0.8.1), foreach, graphics, grid, igraph, iterators, KernSmooth,
lazyeval, MASS, methods, parallel, progress, rlang, scales,
seqinr, stats, stringi (>= 1.1.3), tidyr, tidyselect, utils
magrittr, rlang (>= 0.4.11), forcats, ggplot2, dplyr, cowplot,
scales, ggh4x, stringr, plotly, readr, openxlsx
attempt, datasets, DT, dygraphs, ggplot2 (>= 3.0.0), magrittr,
plotly, stats, utils
tools, utils, httpuv (>= 1.2.0), caTools, RJSONIO, xtable,
digest, htmltools (>= 0.2.4)
tools, utils, httpuv (>= 1.2.2), mime (>= 0.1.3), RJSONIO,
xtable, digest, htmltools (>= 0.2.6), R6 (>= 2.0)
tools, utils, httpuv (>= 1.3.2), mime (>= 0.1.3), RJSONIO,
xtable, digest, htmltools (>= 0.2.6), R6 (>= 2.0)
utils, httpuv (>= 1.3.3), mime (>= 0.3), jsonlite (>= 0.9.16),
xtable, digest, htmltools (>= 0.3.5), R6 (>= 2.0), sourcetools
stats, tools, utils, datasets, methods, websockets (>= 1.1.6),
caTools, RJSONIO, xtable, digest
stats, tools, utils, datasets, methods, httpuv (>= 1.0.5),
caTools, RJSONIO, xtable, digest
stats, tools, utils, datasets, methods, httpuv (>= 1.0.6.2),
caTools, RJSONIO, xtable, digest
stats, tools, utils, methods, httpuv (>= 1.1.0), caTools,
RJSONIO, xtable, digest
stats, tools, utils, methods, httpuv (>= 1.2.0), caTools,
RJSONIO, xtable, digest
stats, tools, utils, httpuv (>= 1.2.0), caTools, RJSONIO,
xtable, digest
utils, httpuv (>= 1.3.5), mime (>= 0.3), jsonlite (>= 0.9.16),
xtable, digest, htmltools (>= 0.3.5), R6 (>= 2.0), sourcetools,
tools
utils, grDevices, httpuv (>= 1.4.3), mime (>= 0.3), jsonlite
(>= 0.9.16), xtable, digest, htmltools (>= 0.3.5), R6 (>= 2.0),
sourcetools, later (>= 0.7.2), promises (>= 1.0.1), tools,
crayon, rlang
utils, grDevices, httpuv (>= 1.4.4), mime (>= 0.3), jsonlite
(>= 0.9.16), xtable, digest, htmltools (>= 0.3.5), R6 (>= 2.0),
sourcetools, later (>= 0.7.2), promises (>= 1.0.1), tools,
crayon, rlang
utils, grDevices, httpuv (>= 1.5.0), mime (>= 0.3), jsonlite
(>= 0.9.16), xtable, digest, htmltools (>= 0.3.6), R6 (>= 2.0),
sourcetools, later (>= 0.7.2), promises (>= 1.0.1), tools,
crayon, rlang
utils, grDevices, httpuv (>= 1.5.2), mime (>= 0.3), jsonlite
(>= 0.9.16), xtable, digest, htmltools (>= 0.4.0), R6 (>= 2.0),
sourcetools, later (>= 1.0.0), promises (>= 1.1.0), tools,
crayon, rlang (>= 0.4.0), fastmap (>= 1.0.0)
utils, grDevices, httpuv (>= 1.5.2), mime (>= 0.3), jsonlite
(>= 0.9.16), xtable, digest, htmltools (>= 0.4.0.9003), R6 (>=
2.0), sourcetools, later (>= 1.0.0), promises (>= 1.1.0),
tools, crayon, rlang (>= 0.4.0), fastmap (>= 1.0.0), withr,
commonmark (>= 1.7), glue (>= 1.3.2)
utils, grDevices, httpuv (>= 1.5.2), mime (>= 0.3), jsonlite
(>= 0.9.16), xtable, fontawesome (>= 0.2.1), htmltools (>=
0.5.2), R6 (>= 2.0), sourcetools, later (>= 1.0.0), promises
(>= 1.1.0), tools, crayon, rlang (>= 0.4.10), fastmap (>=
1.1.0), withr, commonmark (>= 1.7), glue (>= 1.3.2), bslib (>=
0.3.0), cachem, ellipsis, lifecycle (>= 0.2.0)
utils, grDevices, httpuv (>= 1.5.2), mime (>= 0.3), jsonlite
(>= 0.9.16), xtable, fontawesome (>= 0.4.0), htmltools (>=
0.5.2), R6 (>= 2.0), sourcetools, later (>= 1.0.0), promises
(>= 1.1.0), tools, crayon, rlang (>= 0.4.10), fastmap (>=
1.1.0), withr, commonmark (>= 1.7), glue (>= 1.3.2), bslib (>=
0.3.0), cachem, ellipsis, lifecycle (>= 0.2.0)
yaml, jsonlite, methods, stringr, R6, glue, shiny, rstudioapi,
utils
shiny, htmltools, readr, utils, urltools
glue, htmltools, jsonlite, logger, rlang, shiny
shiny, dplyr, dbplyr, scrypt, R6, DBI, googlesheets4, RSQLite,
lubridate
shiny, dplyr, scrypt, R6, DBI, googlesheets4, RSQLite,
lubridate
dplyr, lubridate, lifecycle, scrypt, shinyjs, stringi, uuid
utils, shiny (>= 0.12.1), htmltools (>= 0.2.6), htmlwidgets
(>= 0.8), purrr (>= 0.2.2), magrittr, jsonlite
shiny (>= 0.12.1), htmltools (>= 0.2.6), htmlwidgets (>= 0.8),
purrr (>= 0.2.2), magrittr, jsonlite
shiny (>= 0.12.1), htmltools (>= 0.2.6), htmlwidgets (>= 0.8),
purrr (>= 0.2.2), stats, magrittr, jsonlite, glue, R6
shiny (>= 0.12.1), htmltools (>= 0.2.6), htmlwidgets (>= 0.8),
purrr (>= 0.2.2), stats, magrittr, jsonlite, grDevices, glue,
R6
shiny (>= 1.0.5), jsonlite, utils, tools
htmltools, shiny, reactR, grDevices, utils
htmltools, reactR, shiny, jsonlite, rlang, stringr, grDevices,
utils, formatR
htmltools, reactR, shiny, jsonlite, rlang, stringr, grDevices,
utils, formatR, fontawesome
magrittr, glue, bslib, jsonlite, purrr, ggplot2, ggiraph,
htmltools, shiny, shinyWidgets (>= 0.7.0), dplyr, cohortBuilder
(>= 0.1), tryCatchLog, highr, shinyGizmo, rlang (>= 1.0),
tibble
shiny, jsonlite, mongolite, R.utils, utils, stringr, purrr,
bupaR
tools, shiny (>= 0.11), htmltools, RJSONIO
tools, shiny (>= 0.11), htmltools, jsonlite
htmltools, jsonlite, tools, shiny (>= 1.1.0), fs (>= 1.2.6),
tibble (>= 1.4.2)
magrittr, purrr, glue, htmltools, shiny, shinyWidgets
magrittr, purrr, glue, htmltools, htmlwidgets, shiny,
shinyWidgets
shiny (>= 0.14), htmltools, shinyjs, jsonlite
dplyr, viridis, plotly, jsonlite, shiny, RColorBrewer, readxl,
utils, DT, xtable, htmltools, htmlwidgets
magrittr, shiny, shinydashboard, shinycssloaders, readxl,
stats, mirt, psych, irtoys
shiny(>= 1.0.3), shinydashboard, h2o, shinyWidgets, dygraphs,
plotly, sparklyr, tidyr, DT, ggplot2, shinycssloaders
shiny (>= 1.0.3), argonDash, argonR, shinyjs, shinydashboard,
h2o, shinyWidgets, dygraphs, plotly, sparklyr, tidyr, DT,
ggplot2, shinycssloaders, lubridate, lifecycle, graphics
shiny (>= 1.0.3), argonDash, argonR, shinyjs, h2o,
shinyWidgets, dygraphs, plotly, sparklyr, tidyr, DT, ggplot2,
shinycssloaders, lubridate, graphics
shiny, htmltools, jsonlite, magrittr, httr
shiny, htmltools, jsonlite, magrittr, httr, gplots
dplyr, purrr, checkmate, RDML, shiny, stringr, whisker,
plotly, lazyeval, RColorBrewer
dplyr, purrr, checkmate, RDML, shiny, stringr, whisker,
plotly, RColorBrewer
shinyjs, shiny, shinyWidgets, dplyr, DBI, dbplyr, RSQLite,
magrittr, stringr
htmltools, reactR, shiny, utils, fontawesome, stats
fontawesome, htmltools, reactR, stats, utils
ape, aTSA, Cairo, config (>= 0.3.1), forecast, ggplot2,
ggpubr, ggtree, golem (>= 0.3.1), shiny (>= 1.6.0),
shinydashboard, shinyjs, stringr, treeio, TSA
ape, Cairo, config (>= 0.3.1), DescTools, forecast, ggplot2,
ggprism, ggpubr, ggtree, golem (>= 0.3.1), shiny (>= 1.6.0),
shinydashboard, shinyjs, stringr, treeio
htmltools, reactR, shiny, utils, fontawesome
shiny (>= 0.9.0), htmlwidgets, jsonlite, stringr, promises
shiny (>= 0.14), htmltools, jsonlite, grDevices
shiny (>= 0.14), htmltools, jsonlite, grDevices, scales
bslib, sass, shiny (>= 0.14), htmltools, jsonlite, grDevices
bslib, sass, shiny (>= 1.6.0), htmltools (>= 0.5.1), jsonlite,
grDevices
bslib, sass, shiny (>= 1.6.0), htmltools (>= 0.5.1), jsonlite,
grDevices, rlang
anytime, bslib, sass, shiny (>= 1.6.0), htmltools (>= 0.5.1),
jsonlite, grDevices, rlang
htmltools, shiny (>= 1.0.4), stats, uuid
htmltools, knitr, shiny (>= 1.0.4), stats, uuid
shiny (>= 1.5.0), shinyjs, dplyr, rlang, sodium, glue
htmltools (>= 0.2.6), jsonlite (>= 0.9.12), shiny
utils, shiny (>= 1.0.0), htmltools (>= 0.2.6), promises
shiny, htmltools, shinydashboard, fresh, lifecycle, waiter
shiny, htmltools, shinydashboard, fresh, waiter, lifecycle
shiny, htmltools, shinydashboard, fresh, waiter (>= 0.2.3),
lifecycle
checkmate, glue, htmltools, shiny (>= 1.0)
htmltools, shiny, tools, yaml, DT, R.utils, knitr
shiny, reactable, shinyBS, shinyjs, stringr
shiny (>= 0.14.0), htmlwidgets, jsonlite
shiny (>= 0.14.0), htmltools, htmlwidgets, jsonlite
shiny (>= 1.5.0), htmltools, htmlwidgets, jsonlite, rlang
R6, curl, dplyr (>= 0.8.0.1), getPass, ggplot2, glue, gtable,
htmltools, httpuv (>= 1.5.2), jsonlite, lubridate, magrittr,
progress, readr, rlang (>= 0.1.2), rmarkdown, scales, stringr,
tibble, svglite, websocket (>= 1.0.0), xml2
R6, curl, dplyr (>= 1.0.0), ggplot2, httpuv (>= 1.5.2),
jsonlite, magrittr, rlang (>= 0.1.2), scales, stringr, svglite,
vroom, websocket (>= 1.0.0), xml2
htmltools, shiny (>= 1.1.0), jsonlite, data.table, bit64,
nanotime, digest, anytime, DBI, RSQLite
htmltools, shiny (>= 1.1.0), jsonlite, data.table, bit64,
nanotime, digest, anytime
R6, shiny, htmltools, DT (>= 0.5), DBI, RSQLite, openssl,
R.utils, billboarder
R6, shiny, htmltools, DT (>= 0.5), DBI, RSQLite, openssl,
R.utils, billboarder, scrypt
callr, fastmap, fs, rlang, htmltools, shiny (>= 1.6.0),
sourcetools, styler, utils
callr, digest, fastmap, fs, magrittr, rlang, htmltools, shiny
(>= 1.6.0), sourcetools, styler, utils
dplyr, DT, generics (>= 0.1.0), glue, htmltools, magrittr,
parsnip, plotly, purrr, rlang, scales, shiny, shinydashboard,
stats, tidyr, tidyselect, tune, yardstick
dplyr, glue, knitr, magrittr, pander, readr, rstudioapi,
shiny, stringr, styler, tibble, tidyr
dplyr, glue, knitr, magrittr, methods, pander, purrr, readr,
rlang, rstudioapi, shiny, stringr, styler, tibble, tidyr
shinyjs, shiny, shinyBS, htmltools, jsonlite
pivottabler (>= 1.5.0), shiny, openxlsx, colourpicker,
htmltools
dplyr, shiny, shinydashboard, tm, wordcloud, corrplot,
randomForest, RColorBrewer, DMwR, caret, nnet, plotly, e1071,
knitr
dplyr, shiny, shinydashboard, tm, wordcloud, corrplot,
randomForest, RColorBrewer, caret, nnet, plotly, e1071, knitr
Rcapture, shiny, shinycssloaders, conting, ggplot2, reshape,
CARE1, dga, LCMCR, ipc, future, promises, coda, testthat
dplyr, purrr, stringr, shiny, miniUI, shinyWidgets,
shinyglide, sortable, rstudioapi, DT, tidyr, esquisse
base64enc, jsonlite, shiny (>= 1.0.0), uuid
htmltools (>= 0.2.6), htmlwidgets (>= 0.6), digest, shiny
DT (>= 0.1), dygraphs (>= 0.4.5), gridExtra, gtools, markdown
(>= 0.7.4), methods, reshape2, stats, shinyjs (>= 0.0.7.0),
shinythemes (>= 1.0.1), threejs (>= 0.2.1), utils, xtable (>=
1.7-4), xts (>= 0.9-7)
DT (>= 0.1), dygraphs (>= 0.4.5), ggplot2 (>= 1.0.0),
gridExtra, gtools, markdown (>= 0.7.4), methods, reshape2,
stats, shinyjs (>= 0.1.0), shinythemes (>= 1.0.1), threejs (>=
0.2.1), utils, xtable, xts (>= 0.9-7)
DT (>= 0.1), dygraphs (>= 0.4.5), ggplot2 (>= 2.0.0),
gridExtra, gtools, markdown (>= 0.7.4), methods, reshape2,
stats, shinyjs (>= 0.1.0), shinythemes (>= 1.0.1), threejs (>=
0.2.1), utils, xtable, xts (>= 0.9-7)
DT (>= 0.1), dygraphs (>= 0.4.5), ggplot2 (>= 2.1.0),
gridExtra, gtools, markdown (>= 0.7.4), methods, reshape2,
rsconnect (>= 0.4.2), rstan (>= 2.9.0-3), stats, shinyjs (>=
0.1.0), shinythemes (>= 1.0.1), threejs (>= 0.2.1), utils,
xtable, xts (>= 0.9-7)
colourpicker, DT (>= 0.2), dygraphs (>= 0.4.5), ggplot2 (>=
2.1.0), gridExtra, gtools, markdown (>= 0.7.4), methods,
reshape2, rsconnect (>= 0.4.2), rstan (>= 2.9.0-3), stats,
shinyjs (>= 0.6.0), shinythemes (>= 1.0.1), threejs (>= 0.2.1),
utils, xtable, xts (>= 0.9-7)
bayesplot (>= 1.1.0), colourpicker, DT (>= 0.2), dygraphs (>=
1.1.1.2), ggplot2 (>= 2.1.1), gridExtra, gtools, markdown (>=
0.7.4), methods, reshape2, rsconnect (>= 0.4.2), rstan (>=
2.14.1), stats, shinyjs (>= 0.6.0), shinythemes (>= 1.0.1),
threejs (>= 0.2.1), utils, xtable, xts (>= 0.9-7)
bayesplot (>= 1.2.0), colourpicker, DT (>= 0.2), dygraphs (>=
1.1.1.2), ggplot2 (>= 2.1.1), gridExtra, gtools, markdown (>=
0.7.4), methods, reshape2, rsconnect (>= 0.4.2), rstan (>=
2.14.1), stats, shinyjs (>= 0.6.0), shinythemes (>= 1.0.1),
threejs (>= 0.2.1), utils, xtable, xts (>= 0.9-7)
bayesplot (>= 1.5.0), colourpicker, DT (>= 0.2), dygraphs (>=
1.1.1.2), ggplot2 (>= 2.1.1), gridExtra, gtools, markdown (>=
0.7.4), methods, reshape2, rsconnect (>= 0.4.2), rstan (>=
2.17.1), stats, shinyjs (>= 0.6.0), shinythemes (>= 1.0.1),
threejs (>= 0.2.1), utils, xtable, xts (>= 0.9-7)
bayesplot (>= 1.5.0), colourpicker, DT (>= 0.2), dygraphs (>=
1.1.1.2), ggplot2 (>= 2.1.1), gridExtra, gtools, markdown (>=
0.7.4), methods, reshape2, rstan (>= 2.17.1), stats, shinyjs
(>= 0.6.0), shinythemes (>= 1.0.1), threejs (>= 0.2.1), utils,
xtable, xts (>= 0.9-7)
assertthat, digest, crayon, debugme, parsedate, pingr, callr
(>= 2.0.3), R6, rematch, httr, shiny (>= 1.0.4), testthat (>=
1.0.0), utils, webdriver (>= 1.0.5), htmlwidgets, jsonlite,
withr, httpuv
assertthat, digest, crayon, debugme, parsedate, pingr, callr
(>= 2.0.3), R6, rematch, httr, shiny (>= 1.0.4), testthat (>=
1.0.0), utils, webdriver (>= 1.0.5), htmlwidgets, jsonlite,
withr, httpuv, rstudioapi (>= 0.8.0.9002)
assertthat, digest, crayon, debugme, parsedate, pingr, callr
(>= 2.0.3), R6, rematch, httr, shiny (>= 1.3.2), testthat (>=
1.0.0), utils, webdriver (>= 1.0.5), htmlwidgets, jsonlite,
withr, httpuv, rstudioapi (>= 0.8.0.9002)
assertthat, callr (>= 2.0.3), crayon, debugme, digest,
htmlwidgets, httpuv, httr, jsonlite, parsedate, pingr, R6,
rematch, rlang, rstudioapi (>= 0.8.0.9002), shiny (>= 1.3.2),
testthat (>= 1.0.0), utils, webdriver (>= 1.0.6), withr
R6 (>= 2.4.0), chromote (>= 0.1.0), fs, callr, crayon, rlang
(>= 0.3.0), checkmate (>= 2.0.0), ellipsis, httr, jsonlite,
pingr, rmarkdown, shiny, withr
R6 (>= 2.4.0), callr, checkmate (>= 2.0.0), chromote (>=
0.1.0), crayon, ellipsis, fs, globals (>= 0.14.0), httr,
jsonlite, pingr, rlang (>= 0.3.0), rmarkdown, shiny, withr
stats, chk, lifecycle, shiny, ypr, shinyjs, dplyr, purrr,
readr, ggplot2, magrittr, DT, bsplus, waiter
glasso, mvtnorm, capushe, GGMselect, igraph, stats
stats, LambertW, tidyr, ggplot2, minpack.lm, purrr
coin, energy, graphics, grDevices, mvoutlier, robustbase,
stats, utils
coin, energy, graphics, grDevices, mvoutlier, robustbase,
stats, utils, KernSmooth
coin, energy, graphics, grDevices, KernSmooth, mvoutlier,
robustbase, stats, utils
boot, coin, CompQuadForm, energy, graphics, grDevices,
KernSmooth, mvoutlier, robustbase, stats, utils
boot, coin, CompQuadForm, energy, graphics, grDevices,
KernSmooth, mvoutlier, robustbase, stats, tools, utils
boot, coin, CompQuadForm, graphics, grDevices, KernSmooth,
robustbase, stats, tools, utils
boot, coin, CompQuadForm (>= 1.4.2), graphics, grDevices,
KernSmooth, robustbase, stats, tools, utils
Rcpp, stochvol (>= 3.0.3), coda, utils, shrinkTVP (>= 2.0.2)
Rcpp, GIGrvg, stochvol, coda, methods, utils
Rcpp, GIGrvg, stochvol, coda, methods, utils, zoo
Rcpp, GIGrvg, stochvol (>= 3.0.3), coda, methods, utils, zoo
dplyr, minpack.lm, fBasics, ggplot2, stats
dplyr, minpack.lm, fBasics, ggplot2, cowplot, stats
httr, tidyr, tibble, dplyr, magrittr, purrr, utils
data.table, httr, magrittr, tibble, dplyr, cli
ape, network, igraph, gridBase, grid, ggmap, ggplot2
dplyr, magrittr, RCurl, rjson, rvest, stringr, xml2
dplyr, magrittr, RCurl, rjson, rvest, stringr, tidyr, xml2
magrittr, RCurl, rjson, rvest, stringr, xml2
magrittr, httr, rjson, rvest, stringr, xml2
pastecs (>= 1.3.21), stats, dplyr (>= 1.0.0), rlang (>=
0.4.3), tidyr (>= 1.0.0), tibble, purrr, glue, tidyselect
randomForest, stringr, pbivnorm, Formula, maxLik, xtable, MASS
MASS, lattice, KernSmooth, cluster, nnet, class, gridGraphics,
biclust, gplots, ComplexHeatmap, RankProd, fmsb, moments,
grDevices, graphics, stats, utils
MASS, lattice, KernSmooth, cluster, nnet, class, gridGraphics,
biclust, gplots, ComplexHeatmap, RankProd, fmsb, moments,
grDevices, graphics, stats, utils, mclust
MASS, lattice, KernSmooth, cluster, nnet, class, gridGraphics,
biclust, gplots, ComplexHeatmap, RankProd, fmsb, moments,
grDevices, graphics, stats, utils, mclust, GSVA, circlize
htmlwidgets, dplyr, magrittr, shiny, jsonlite, igraph,
htmltools, purrr, crosstalk
htmlwidgets, dplyr, magrittr, shiny, jsonlite, igraph,
htmltools, purrr, scales, crosstalk
htmlwidgets, dplyr (>= 0.7.0), magrittr, shiny, jsonlite,
igraph, htmltools, purrr, scales, crosstalk
cluster, corrplot, cowplot, data.table, doParallel, dplyr,
flexmix, foreach, ggplot2, maftools, methods, NMF,
RColorBrewer, tidyr, magrittr, purrr
cluster, cowplot, data.table, doFuture, dplyr, flexmix,
foreach, furrr, future, GenomicRanges, ggalluvial, ggplot2 (>=
3.3.0), ggpubr, IRanges, maftools, magrittr, methods, NMF,
purrr, RColorBrewer, rlang, stats, tibble, tidyr, patchwork,
ggplotify, circlize, lsei
cli (>= 2.0.0), cowplot, data.table, dplyr, foreach, furrr,
future, ggplot2 (>= 3.3.0), ggpubr, maftools, magrittr,
methods, NMF, purrr, Rcpp, rlang (>= 0.1.2), stats, tidyr
cli, cowplot, data.table, dplyr, foreach, furrr, future,
ggplot2 (>= 3.3.0), ggpubr, maftools, magrittr, methods, NMF,
purrr, rlang, stats, tidyr
cli (>= 2.0.0), cowplot, data.table, dplyr, foreach, furrr,
future, ggplot2 (>= 3.3.0), ggpubr, maftools, magrittr,
methods, NMF, purrr, rlang, stats, tidyr
cli (>= 2.0.0), cowplot, data.table, dplyr, foreach, furrr,
future, ggplot2 (>= 3.3.0), ggpubr, maftools, magrittr,
methods, NMF, purrr, rlang (>= 0.1.2), stats, tidyr
cli (>= 2.0.0), cowplot, data.table, dplyr, foreach, furrr (>=
0.2.0), future, ggplot2 (>= 3.3.0), ggpubr, maftools, magrittr,
methods, NMF, purrr, Rcpp, rlang (>= 0.1.2), stats, tidyr
cli (>= 2.0.0), cowplot, data.table, dplyr, furrr (>= 0.2.0),
future, ggplot2 (>= 3.3.0), ggpubr, maftools, magrittr,
methods, NMF, purrr, Rcpp, rlang (>= 0.1.2), stats, tidyr
biogram, graphics, seqinr, shiny, stats, utils
lme4, rgdal, sp, raster, ggplot2, ggforce
lme4, sp, raster, ggplot2, ggforce, fasterize, reshape2
lme4, sp,raster, ggplot2, ggforce, fasterize, reshape2
dplyr, gibble (>= 0.2.0), methods, purrr, rlang, decido,
tibble, unjoin (>= 0.0.3), geometry, tidyr (>= 1.0.0),
grDevices, graphics, stats, magrittr, gridBase
dplyr, gibble (>= 0.2.0), methods, purrr, rlang, decido,
tibble, unjoin (>= 0.0.3), tidyr (>= 1.0.0), grDevices,
graphics, stats, magrittr, gridBase, crsmeta (>= 0.2.0)
dplyr, gibble (>= 0.2.0), methods, purrr, rlang, decido,
tibble, unjoin (>= 0.0.3), grDevices, graphics, stats,
magrittr, gridBase, crsmeta (>= 0.3.0)
dplyr, gibble (>= 0.4.0), methods, purrr, rlang, decido,
tibble, unjoin (>= 0.0.4), grDevices, graphics, stats,
magrittr, gridBase, crsmeta (>= 0.3.0)
dplyr, gibble (>= 0.4.0), methods, purrr, rlang, decido,
tibble, unjoin (>= 0.1.0), grDevices, graphics, stats,
magrittr, gridBase, crsmeta (>= 0.3.0)
car, ggplot2, MASS, Rdpack, spam (>= 2.2-0), tidyverse,
tibble, dplyr, magrittr, matrixcalc
dplyr, ggplot2, ggpmisc, ggpubr, lubridate, magrittr, plyr,
readxl, rlang, stringr, tidyr
dplyr, ggplot2, ggpmisc, ggpubr, lubridate, magrittr, plyr,
rlang, stringr, tidyr
graphics, grDevices, methods, stats, utils, shape
stats, graphics, MASS, rvinecopulib (>= 0.2.8.1.0), truncnorm,
bde, ks, np, extraDistr
grDevices, graphics, stats, rgl, splancs, GenSA, Hmisc,
lattice, parallel
Biostrings, BSgenome, GenomeInfoDb, GenomicRanges, IRanges,
XVector
mvtnorm, gRbase, graph, igraph, ggm, qpgraph, R.utils,
htmlwidgets, shiny, shinydashboard ,grDevices, graphics, stats
mvtnorm, gRbase, graph, igraph, ggm, qpgraph, R.utils,
htmlwidgets, shiny, shinydashboard ,grDevices, graphics
car, data.table, ggplot2, gridExtra, mgcv, MSBVAR, plyr,
reshape2, rgl, stringr, survival, quadprog
car, data.table, ggplot2, gridExtra, MSBVAR, plyr, reshape2,
stringr, survival, quadprog
car, data.table, dplyr, ggplot2, gridExtra, MASS, mgcv, plyr,
reshape2, stats, stringr, survival, quadprog
car, DataCombine, data.table (>= 1.9.2), dplyr, ggplot2,
gridExtra, MASS, mgcv, plyr, reshape2, stats, stringr,
survival, quadprog
car, DataCombine, data.table (>= 1.9.2), dplyr (>= 0.3),
ggplot2, gridExtra, lazyeval, MASS, mgcv, reshape2, stringr,
survival, quadprog
car, DataCombine, data.table (>= 1.9.2), dplyr (>= 0.3),
ggplot2, gridExtra, lazyeval, MASS, mgcv, reshape2, stringr (<=
0.7), survival, quadprog
car, data.table (>= 1.9.2), dplyr (>= 0.3), ggplot2,
gridExtra, lazyeval, MASS, mgcv, reshape2, stringr, survival,
quadprog
data.table (>= 1.9.2), dplyr (>= 0.3), ggplot2, gridExtra,
lazyeval, MASS, mgcv, reshape2, stringr, survival, quadprog
data.table (>= 1.9.6), dplyr (>= 0.4), ggplot2, gridExtra,
lazyeval, MASS, mgcv, stringr, survival, quadprog
data.table (>= 1.9.6), dplyr (>= 0.3), ggplot2, gridExtra,
lazyeval, MASS, mgcv, stringr, survival, quadprog
laeken, MASS, Rcpp (>= 0.11.0), e1071, parallel, nnet,
doParallel, foreach, colorspace, VIM, methods
laeken, MASS, Rcpp (>= 0.11.0), e1071, parallel, nnet,
doParallel, foreach, colorspace, methods
laeken, plyr, MASS, Rcpp (>= 0.11.0), e1071, parallel, nnet,
doParallel, foreach, colorspace, VIM, methods,party
laeken, plyr, MASS, Rcpp (>= 0.11.0), e1071, parallel, nnet,
doParallel, foreach, colorspace, VIM,
methods,party,EnvStats,fitdistrplus,ranger
laeken, plyr, MASS, Rcpp (>= 0.11.0),RcppArmadillo, e1071,
parallel, nnet, doParallel, foreach, colorspace, VIM,
methods,party,EnvStats,fitdistrplus,ranger,wrswoR
laeken, plyr, MASS, Rcpp (>= 0.11.0),RcppArmadillo, e1071,
parallel, nnet, doParallel, foreach, colorspace, VIM,
methods,party,EnvStats,fitdistrplus,ranger,wrswoR, data.table
data.table, MASS, Rcpp (>= 0.11.0),RcppArmadillo, e1071,
parallel, nnet, doParallel, foreach, colorspace, VIM,
methods,party,EnvStats,fitdistrplus,ranger,wrswoR,
matrixStats,xgboost
data.table, stringr, R6, assertthat, reshape2, Matrix
data.table, stringr, R6, assertthat, Matrix, methods
data.table, igraph, stringr, R6, assertthat, Matrix, methods
graphics, grDevices, stats, utils, minqa
utils, stats, Matrix, methods, MASS, rMVP, Rcpp, rjson, igraph
utils, stats, Matrix, methods, MASS, Rcpp, rjson, igraph
dplyr, magrittr, jsonlite, lubridate, memoise, purrr
dplyr, magrittr, jsonlite, lubridate, memoise, purrr, crayon
dplyr, magrittr, jsonlite, lubridate, memoise, purrr, crayon,
digest
checkmate (>= 2.0.0), data.table (>= 1.12.8), future.apply (>=
1.4.0), httr, memoise (>= 1.1.0), RcppSimdJson (>= 0.1.1),
utils
bit64, checkmate (>= 2.0.0), data.table (>= 1.12.8),
future.apply (>= 1.4.0), httr, memoise (>= 1.1.0), progressr,
RcppSimdJson (>= 0.1.1), utils
stats, methods, Matrix, rlang, dplyr, purrr, broom
stats, methods, Matrix, rlang, dplyr, purrr, broom,
future.apply
stats, methods, rlang, dplyr, purrr, broom, future.apply
rlang, stats, dplyr, furrr, future, magrittr, utils, purrr,
tibble, rstudioapi, Rdpack, tidyr
rlang, stats, dplyr, furrr, magrittr, tibble, rstudioapi,
tidyr, Rdpack
dplyr, magrittr, purrr, tibble, ggplot2, scales, MASS, plotly,
htmlwidgets, bigmemory, digest, methods, ks, gganimate,
forcats, rlang
dplyr, magrittr, purrr, tibble, ggplot2, scales, MASS, plotly,
htmlwidgets, bigmemory, digest, methods, ks, gganimate,
forcats, rlang, lifecycle, progress
bigmemory, digest, dplyr, forcats, gganimate, ggplot2,
grDevices, htmlwidgets, ks, lifecycle, magrittr, MASS, methods,
plotly, progress, purrr, rlang, tibble
DiagrammeR (>= 0.9.0), scales, dplyr (>= 0.7.0), tidyr, utils
DiagrammeR (>= 0.9.0), dplyr (>= 0.7.0), tidyr (>= 0.7.0),
scales, utils
DiagrammeR (>= 1.0.0), dplyr (>= 0.7.0), tidyr (>= 0.7.0),
scales, utils
DiagrammeR (>= 0.9.0), scales, dplyr, tidyr, utils
MASS, compositions, boot, reshape2, coda, graphics, stats
MASS, compositions, boot, reshape2, coda, graphics, stats,
viridis
MASS, compositions, boot, reshape2, coda, graphics, stats,
viridis, bayesplot
MASS, compositions, boot, reshape2, graphics, stats, viridis,
bayesplot
MASS, compositions, boot, reshape2, graphics, stats, viridis,
bayesplot, checkmate
dplyr, geodist, od (>= 0.4.0), rlang, sf
data.table, mvtnorm, lqmm, stats, utils, SNPRelate, gdsfmt
data.table, mvtnorm, stats, utils, SNPRelate, gdsfmt
colorspace, dplyr, forcats, ggplot2, magrittr, stats, stringr
dplyr (>= 0.8.0), DT, forcats, ggplot2 (>= 3.3.0), leaflet (>=
2.0.0), leafpop, leaflet.extras, janitor, lubridate, magrittr,
methods, plotly, readr, rgdal, rmarkdown, rlang (>= 0.4.0),
scales, sf (>= 0.8.0), shiny, shinycssloaders, stars (>=
0.4.0), stats, stringr (>= 1.4.0), tibble, tidyr (>= 1.0.0),
viridis
dplyr (>= 1.0.0), DT, forcats, ggplot2 (>= 3.3.0), leaflet (>=
2.0.0), leafpop, leaflet.extras, janitor, lubridate, magrittr,
methods, plotly, readr, rgdal, rmarkdown, rlang (>= 0.4.0),
scales, sf (>= 0.8.0), shiny, shinycssloaders, stars (>=
0.4.0), stats, stringr (>= 1.4.0), tibble (>= 3.0.0), tidyr (>=
1.0.0), viridis
dplyr (>= 1.0.0), DT, forcats, ggplot2 (>= 3.3.0), htmltools,
leaflet (>= 2.0.0), leafpop, leaflet.extras, janitor,
lubridate, magrittr, methods, plotly, readr, rgdal, rmarkdown,
rlang (>= 0.4.0), scales, sf (>= 0.8.0), shiny,
shinycssloaders, stars (>= 0.4.0), stats, stringr (>= 1.4.0),
tibble (>= 3.0.0), tidyr (>= 1.0.0), viridis
dplyr (>= 1.0.0), DT, forcats, ggplot2 (>= 3.3.0), htmltools,
leaflet (>= 2.0.0), leafpop, leaflet.extras, janitor,
lubridate, magrittr, methods, plotly, readr, rgdal, rmarkdown,
rlang (>= 0.4.0), scales, sf (>= 0.9.0), shiny,
shinycssloaders, stars (>= 0.4.1), stats, stringr (>= 1.4.0),
tibble (>= 3.0.0), tidyr (>= 1.0.0), viridis
dplyr, DT, forcats, ggplot2, htmltools, leaflet, leafpop,
leaflet.extras, janitor, jsonlite, lubridate, magrittr,
methods, plotly, readr, rgdal, rmarkdown, rlang, scales, sf,
shiny, shinycssloaders, stars, stats, stringr, tibble, tidyr
(>= 1.0.0), viridis
dplyr (>= 1.0.0), DT, forcats, ggplot2 (>= 2.0.0), htmltools,
leaflet (>= 2.0.0), leafpop, leaflet.extras, janitor, jsonlite,
lubridate, magrittr, methods, plotly, readr, rgdal, rlang (>=
0.4.0), rmarkdown, scales, sf, shiny, shinycssloaders, stars,
stats, stringr, tibble, tidyr (>= 1.0.0), viridis
dplyr (>= 1.0.0), DT, forcats, ggplot2 (>= 2.0.0), htmltools,
leaflet (>= 2.0.0), leafpop, leaflet.extras, janitor, jsonlite,
lubridate, magrittr, methods, plotly, readr, rlang (>= 0.4.0),
rmarkdown, scales, sf, shiny, shinycssloaders, stats, stringr,
tibble, tidyr (>= 1.0.0), viridis
dplyr (>= 1.0.0), DT, forcats, ggplot2 (>= 3.0.0), htmltools,
leaflet (>= 2.0.0), leafpop, leaflet.extras, jsonlite,
lubridate, magrittr, plotly, readr, rlang (>= 0.4.0), scales,
sf, shiny, shinycssloaders, snakecase, stringr, tibble, tidyr
(>= 1.0.0), viridis
dplyr (>= 1.0.0), DT, forcats, ggplot2 (>= 3.0.0), htmltools,
leaflet (>= 2.0.0), leafpop, leaflet.extras, jsonlite,
lubridate, magrittr, plotly, purrr, readr, rlang (>= 0.4.0),
scales, sf, shiny, shinycssloaders, snakecase, stringr, tibble,
tidyr (>= 1.0.0), viridis
dplyr (>= 1.0.0), DT, forcats, ggplot2 (>= 3.0.0), htmltools,
leaflet (>= 2.0.0), kimisc, leafpop, leaflet.extras, jsonlite,
lubridate, magrittr, plotly, purrr, readr, rlang (>= 0.4.0),
scales, sf, shiny, shinycssloaders, snakecase, stringr, tibble,
tidyr (>= 1.0.0), viridis
dplyr (>= 1.0.0), DT, forcats, ggplot2 (>= 3.0.0), htmltools,
janitor, kimisc, leaflet (>= 2.0.0), leaflet.extras, leafpop,
lubridate, magrittr, plotly, purrr, readr, rlang (>= 0.4.0),
scales, sf, shiny, shinycssloaders, snakecase, stringr, tibble,
tidyr (>= 1.0.0), tidyselect, viridis
dplyr, forcats, ggplot2, htmlwidgets, leaflet, leafem,
leafpop, lubridate, magrittr, purrr, rlang, scales, sf,
snakecase, stars, stringr, tidyr, tidyselect, viridis
dplyr, forcats, ggplot2, htmlwidgets, leaflet, leafem,
leafpop, lifecycle, lubridate, magrittr, plotly, purrr, rlang,
scales, sf, shiny, snakecase, stars, stringr, tidyr,
tidyselect, viridis
dplyr, forcats, ggplot2, htmlwidgets, leaflet, leafem,
leafpop, lubridate, magrittr, plotly, purrr, rlang, scales, sf,
shiny, snakecase, stars, stringr, tidyr, tidyselect, viridis
dplyr, forcats, ggplot2, htmlwidgets, leaflet, leafem,
leafpop, kimisc, lubridate, magrittr, plotly, purrr, rlang,
scales, sf, shiny, snakecase, stars, stringr, tidyr,
tidyselect, viridis
dplyr, forcats, ggplot2, htmlwidgets, leaflet, leafem,
leafpop, lubridate, magrittr, plotly, purrr, rlang, santoku,
scales, sf, shiny, snakecase, stars, stringr, tidyr,
tidyselect, viridis
broom, dplyr, furrr, generics, purrr, magrittr, rlang, tibble,
tidyr, tidyselect
broom, dplyr, furrr, generics, purrr, magrittr, rlang, tibble,
tidyr (>= 1.2.0), tidyselect
stats, utils, MASS, rpart, gower, VIM, randomForest, glmnet,
missForest, norm
FrF2, ggplot2, gridExtra, jsonlite, magrittr, miniUI, purrr,
reshape2, rstudioapi, scales, sfsmisc, shiny, tibble, tidyr,
rlang, testthat
chk, future.apply, nlist, parallel, stats, yesno
utils, methods, grid, sfsmisc, gridBase (>= 0.4-6), colorspace
stats, parallel, utils, grDevices, methods, grid, sfsmisc,
gridBase (>= 0.4-6), colorspace
parallel, utils, methods, grid, sfsmisc, gridBase (>= 0.4-6),
colorspace
lavaan, mvtnorm, tibble, stats, magrittr, rlang
lavaan, mvtnorm, tibble, stats, magrittr, rlang, purrr
data.table, glue, methods, mvnfast, mvtnorm, Rcpp
data.table, glue, methods, mvnfast, mvtnorm, Rcpp, backports
Rcpp, stats, utils, scales, grDevices, graphics, broom, dplyr,
magrittr, methods, purrr, tidyr, robcor
ks, mvtnorm, parallel, stats, MASS, methods
ggplot2 (>= 3.3), dplyr, grid, lubridate, openair, png,
raster, reshape2, reticulate, RColorBrewer, scales
methods, graphics, grDevices, stats, utils, magrittr
mutatr, stringr, brew, rjson, evaluate (>= 0.3)
rstudioapi, utils, tools, sos, stringi, yaml, crayon, cli,
rematch2
methods, Matrix, splines, ggplot2, reshape2
utils, cowsay, jsonlite, xaringan, pagedown, bookdownplus,
rosr, crayon, multicolor, rmsfact, clipr
utils, cowsay, jsonlite, xaringan, pagedown, bookdownplus
mvtnorm, sfsmisc, TAM, CDM, combinat, ic.infer, sm, psych,
pbivnorm
sfsmisc, TAM, CDM, combinat, ic.infer, sm, psych, pbivnorm
sfsmisc, TAM, CDM, combinat, ic.infer, sm, psych, pbivnorm,
gtools, Rcpp
sfsmisc, TAM, CDM, combinat, ic.infer, sm, psych, pbivnorm,
gtools, Rcpp (>= 0.11.0)
sfsmisc, TAM, CDM, combinat, ic.infer, sm, psych, pbivnorm,
gtools, Rcpp (>= 0.11.0), qgraph
sfsmisc, TAM, CDM, combinat, ic.infer, sm, psych, pbivnorm,
gtools, Rcpp (>= 0.11.0), qgraph, lavaan, semPlot, igraph
sfsmisc, TAM, CDM, combinat, ic.infer, sm, psych, pbivnorm,
gtools, Rcpp (>= 0.11.0), qgraph, lavaan, semPlot, igraph,
coda, mvtnorm, MASS
sfsmisc, TAM (>= 1.0-3), CDM (>= 3.3), mirt (>= 1.5),
combinat, ic.infer, sm, psych, pbivnorm, gtools, Rcpp (>=
0.11.0), qgraph, lavaan, semPlot, igraph, coda, mvtnorm, MASS,
Matrix
TAM (>= 1.2), CDM (>= 4.0), mirt (>= 1.6), combinat, ic.infer,
sfsmisc, sm, psych, pbivnorm, gtools, Rcpp (>= 0.11.0), qgraph,
lavaan (>= 0.5-17), semPlot, igraph, coda, mvtnorm, MASS,
Matrix
coda, combinat, graphics, gtools, ic.infer, igraph, lavaan,
lavaan.survey, MASS, Matrix, methods, mirt, mvtnorm, pbivnorm,
plyr, psych, Rcpp, sfsmisc, sm, stats, survey, utils
coda, combinat, graphics, gtools, ic.infer, igraph, lavaan,
lavaan.survey, MASS, MCMCpack, Matrix, methods, mirt, mvtnorm,
pbivnorm, plyr, psych, Rcpp, sfsmisc, sm, stats, survey, utils
CDM (>= 5.0), coda, combinat, graphics, gtools, ic.infer,
igraph, lavaan, lavaan.survey, MASS, MCMCpack, Matrix, methods,
mirt, mvtnorm, pbivnorm, plyr, psych, Rcpp, sfsmisc, sm, stats,
survey, TAM (>= 1.99), utils
CDM, coda, combinat, graphics, gtools, ic.infer, igraph,
lavaan, lavaan.survey, MASS, MCMCpack, Matrix, methods, mirt,
mvtnorm, pbivnorm, plyr, psych, Rcpp, sfsmisc, sm, stats,
survey, TAM, utils
Rcpp (>= 0.11.0), mirt (>= 1.7), lavaan (>= 0.5-17), qgraph,
semPlot, combinat, ic.infer, sfsmisc, sm, psych, pbivnorm,
gtools, igraph, coda, mvtnorm, MASS, Matrix
Rcpp, mirt, lavaan, qgraph, semPlot, combinat, ic.infer,
sfsmisc, sm, psych, pbivnorm, gtools, igraph, coda, mvtnorm,
MASS, Matrix
Rcpp, mirt, lavaan, qgraph, semPlot, combinat, ic.infer,
sfsmisc, sm, psych, pbivnorm, gtools, igraph, coda, mvtnorm,
MASS, Matrix, lavaan.survey, survey
stats, graphics, utils, Rcpp, mirt, lavaan, qgraph, semPlot,
combinat, ic.infer, sfsmisc, sm, psych, pbivnorm, gtools,
igraph, coda, mvtnorm, MASS, Matrix, lavaan.survey, survey
stats, graphics, utils, methods, Rcpp, mirt, lavaan, combinat,
ic.infer, sfsmisc, sm, psych, pbivnorm, gtools, igraph, coda,
mvtnorm, MASS, Matrix, lavaan.survey, survey
CDM, coda, combinat, graphics, gtools, ic.infer, igraph,
lavaan, lavaan.survey, MASS, Matrix, methods, mirt, mvtnorm,
pbivnorm, plyr, psych, Rcpp, sfsmisc, sm, stats, survey, TAM,
utils
CDM (>= 5.8-5), coda, graphics, lavaan, lavaan.survey,
methods, mirt, mvtnorm, Rcpp, sfsmisc, stats, survey, TAM (>=
2.5-5), utils
CDM (>= 6.0), coda, graphics, lavaan, lavaan.survey, methods,
mirt, mvtnorm, Rcpp, sfsmisc, stats, survey, TAM (>= 2.5-5),
utils
CDM (>= 6.0), coda, graphics, lavaan, lavaan.survey, MASS,
methods, mirt, mvtnorm, Rcpp, sfsmisc, stats, survey, TAM (>=
2.5-5), utils
CDM, graphics, methods, Rcpp, stats, TAM, utils
CDM (>= 6.0), coda, graphics, lavaan, MASS, methods, mirt,
mvtnorm, Rcpp, stats, TAM (>= 2.5-5), utils
Rcpp (>= 0.11.2), Matrix, ROCR, ggplot2, glmnet
graphics, grDevices, grid, methods, stats, utils, boot,
lattice, mgcv, digest, R.matlab, R.methodsS3
XRJulia (>= 0.9.0), parallel, truncnorm, tictoc, stats, utils,
dplyr, magrittr, stringr, XR, jsonlite, methods, tidyr, ggpubr,
ggplot2, rlang, grDevices, igraph, graphics, scales
dplyr, openxlsx, rlang, shiny, stringr, tcltk, utils
dplyr (>= 1.0), openxlsx, rlang, shiny, stringr, tcltk, utils
dplyr (>= 1.0), openxlsx, rlang, shiny, stringi, stringr,
tcltk, utils
BlandAltmanLeh, dplyr, ggbeeswarm, ggplot2, ggrepel, rlang,
scales, stats
MASS, RColorBrewer, coda, gtools, moments, polyapost, rcdd,
stats
MASS, RColorBrewer, coda, gdata, gtools, moments, polyapost,
rcdd, stats
dplyr, glue, purrr, quantreg, rlang, rsample, stats, tibble,
tidyr
dplyr, glue, purrr, rlang, rsample, stats, tibble, tidyr
dplyr, forcats, ggplot2, glue, purrr, rlang, rsample, stats,
tibble, tidyr, magrittr
data.table, dplyr, ymlthis, magrittr, yaml, stringr,
lubridate, rmarkdown, rlist, purrr
magrittr, yaml, data.table (>= 1.13), dplyr (>= 1.0.0),
gdalUtilities, grDevices, ggplot2, graphics, lubridate,
parallel (>= 4.0.5), purrr (>= 0.3.0), Rcpp, rstac (>=
0.9.1-5), sf (>= 1.0), slider (>= 0.2.0), stats, terra (>=
1.5-17), tibble (>= 3.1), tidyr (>= 1.2.0), torch (>= 0.7.0),
utils
magrittr, yaml, data.table (>= 1.13), dplyr (>= 1.0.0),
gdalUtilities, grDevices, graphics, lubridate, parallel (>=
4.0.5), purrr (>= 0.3.0), Rcpp, rstac (>= 0.9.1-5), sf (>=
1.0), slider (>= 0.2.0), stats, terra (>= 1.5-17), tibble (>=
3.1), tidyr (>= 1.2.0), torch (>= 0.7.0), utils
sf, sfheaders, geos, libgeos, ggplot2, cowplot
doParallel, parallel, foreach, glmnet, pROC, varhandle, utils
MCMCpack, matrixStats, MASS, grDevices, graphics, stats, utils
MCMCpack, matrixStats, MASS, grDevices, graphics, stats,
utils, mcmc
ggplot2, MASS, car, foreign, lmtest, plyr, reshape2, scales
ggplot2, MASS, car, foreign, lmtest, plyr, psych, reshape2,
scales
ggplot2, MASS, car, coin, foreign, lmtest, lsmeans, plyr,
psych, reshape2, scales
ggplot2, MASS, car, foreign, plyr, psych, reshape2, scales
ggplot2, MASS, car, foreign, psych, scales, dplyr (>= 0.4.1),
tidyr (>= 0.2.0)
car, dplyr (>= 0.4.1), ggplot2, grid, MASS, psych, scales,
sjmisc (>= 1.0.2), tidyr (>= 0.2.0)
car, dplyr (>= 0.4.1), ggplot2, grid, MASS, psych, scales,
sjmisc (>= 1.0.3), tidyr (>= 0.2.0)
car, dplyr (>= 0.4.1), ggplot2, grid, MASS, magrittr, psych,
scales, sjmisc (>= 1.1), tidyr (>= 0.2.0)
car, dplyr (>= 0.4.1), ggplot2, grid, MASS, psych, scales,
sjmisc, tidyr (>= 0.2.0)
car, dplyr (>= 0.4.3), effects, ggplot2 (>= 2.0.0), lme4,
MASS, magrittr, nlme, psych, scales, sjmisc (>= 1.4), tidyr (>=
0.4.0)
car, dplyr (>= 0.4.3), effects, ggplot2 (>= 2.0.0), lme4 (>=
1.1-8), MASS, magrittr, nlme, psych, scales, sjmisc (>= 1.5),
tidyr (>= 0.4.1)
car, dplyr (>= 0.4.3), effects, ggplot2 (>= 2.0.0), lme4 (>=
1.1-8), MASS, magrittr, nlme, psych, scales, sjmisc (>= 1.6),
tidyr (>= 0.4.1)
car, dplyr (>= 0.4.3), ggplot2 (>= 2.0.0), MASS, magrittr,
psych, scales, sjmisc (>= 1.4), tidyr (>= 0.4.0)
car, dplyr (>= 0.4.3), effects, ggplot2 (>= 2.1.0), lme4 (>=
1.1-10), MASS, magrittr, nlme, psych, scales, sjmisc (>= 1.7),
tidyr (>= 0.4.1)
broom (>= 0.4.2), dplyr (>= 0.7.1), effects, forcats,
ggeffects (>= 0.2.0), ggplot2 (>= 2.2.1), knitr, lme4 (>=
1.1-12), MASS, merTools (>= 0.3.0), modelr, nlme, psych, purrr,
rlang, scales, sjlabelled (>= 1.0.1), sjmisc (>= 2.5.0),
sjstats (>= 0.10.3), tibble (>= 1.3.3), tidyr (>= 0.6.1)
broom (>= 0.4.2), dplyr (>= 0.7.1), effects, forcats,
ggeffects (>= 0.2.1), ggplot2 (>= 2.2.1), knitr, lme4 (>=
1.1-12), MASS, merTools (>= 0.3.0), modelr, nlme, psych, purrr,
rlang, scales, sjlabelled (>= 1.0.1), sjmisc (>= 2.6.1),
sjstats (>= 0.11.0), tibble (>= 1.3.3), tidyr (>= 0.7.0)
arm, broom (>= 0.4.2), dplyr (>= 0.7.1), effects, forcats,
ggeffects (>= 0.2.2), glmmTMB, ggplot2 (>= 2.2.1), knitr, lme4
(>= 1.1-12), magrittr, MASS, merTools (>= 0.3.0), modelr, nlme,
prediction, psych, purrr, rlang, scales, sjlabelled (>= 1.0.4),
sjmisc (>= 2.6.1), sjstats (>= 0.12.0), tidyselect, tibble (>=
1.3.3), tidyr (>= 0.7.0)
arm, broom (>= 0.4.2), dplyr (>= 0.7.1), effects, forcats,
ggeffects (>= 0.3.1), glmmTMB, ggplot2 (>= 2.2.1), knitr, lme4
(>= 1.1-12), magrittr, MASS, merTools (>= 0.3.0), modelr, nlme,
psych, purrr, rlang, scales, sjlabelled (>= 1.0.7), sjmisc (>=
2.6.3), sjstats (>= 0.14.0), tidyselect, tibble (>= 1.3.3),
tidyr (>= 0.7.0)
arm, broom (>= 0.4.5), dplyr (>= 0.7.5), effects, forcats,
ggeffects (>= 0.4.0), glmmTMB, ggplot2 (>= 2.2.1), knitr, lme4
(>= 1.1-12), magrittr, MASS, modelr, nlme, psych, purrr, rlang,
scales, sjlabelled (>= 1.0.12), sjmisc (>= 2.7.3), sjstats (>=
0.15.0), tidyselect, tibble (>= 1.3.3), tidyr (>= 0.7.0)
broom (>= 0.4.5), dplyr (>= 0.7.5), forcats, ggeffects (>=
0.5.0), glmmTMB, ggplot2 (>= 2.2.1), knitr, lme4 (>= 1.1-12),
magrittr, MASS, modelr, nlme, psych, purrr, rlang, scales,
sjlabelled (>= 1.0.13), sjmisc (>= 2.7.4), sjstats (>= 0.17.0),
tidyr (>= 0.7.0)
broom (>= 0.4.5), dplyr (>= 0.7.5), forcats, ggeffects (>=
0.6.0), glmmTMB, ggplot2 (>= 2.2.1), knitr, lme4 (>= 1.1-12),
magrittr, MASS, modelr, nlme, psych, purrr, rlang, scales,
sjlabelled (>= 1.0.14), sjmisc (>= 2.7.5), sjstats (>= 0.17.1),
tidyr (>= 0.7.0)
broom, dplyr (>= 0.7.5), forcats, ggeffects (>= 0.7.0),
glmmTMB, ggplot2 (>= 2.2.1), knitr, lme4 (>= 1.1-12), magrittr,
MASS, modelr, nlme, psych, purrr, rlang, scales, sjlabelled (>=
1.0.14), sjmisc (>= 2.7.6), sjstats (>= 0.17.2), tidyr (>=
0.7.0)
bayestestR, broom, dplyr (>= 0.7.5), forcats, ggeffects (>=
0.7.0), glmmTMB, ggplot2 (>= 2.2.1), knitr, insight, lme4 (>=
1.1-12), magrittr, MASS, modelr, nlme, performance, psych,
purrr, rlang, scales, sjlabelled (>= 1.0.14), sjmisc (>=
2.7.6), sjstats (>= 0.17.2), tidyr (>= 0.7.0)
bayestestR (>= 0.2.0), broom, dplyr (>= 0.7.5), forcats,
ggeffects (>= 0.11.0), glmmTMB, ggplot2 (>= 2.2.1), ggrepel,
knitr, insight (>= 0.4.1), lme4 (>= 1.1-12), magrittr, MASS,
modelr, nlme, performance (>= 0.2.0), psych, purrr, rlang,
scales, sjlabelled (>= 1.1.0), sjmisc (>= 2.8.0), sjstats (>=
0.17.5), tidyr (>= 0.7.0)
bayestestR (>= 0.2.5), broom, dplyr (>= 0.8.1), forcats,
ggeffects (>= 0.12.0), glmmTMB, ggplot2 (>= 3.2.0), ggrepel,
knitr, insight (>= 0.4.1), lme4 (>= 1.1-12), magrittr, MASS,
modelr, nlme, performance (>= 0.3.0), psych, purrr, rlang,
scales, sjlabelled (>= 1.1.0), sjmisc (>= 2.8.0), sjstats (>=
0.17.5), tidyr (>= 0.7.0)
bayestestR (>= 0.3.0), broom, dplyr (>= 0.8.1), forcats,
ggeffects (>= 0.12.0), glmmTMB, ggplot2 (>= 3.2.0), ggrepel,
knitr, insight (>= 0.5.0), lme4 (>= 1.1-12), magrittr, MASS,
modelr, nlme, parameters (>= 0.2.0), performance (>= 0.3.0),
psych, purrr, rlang, scales, sjlabelled (>= 1.1.0), sjmisc (>=
2.8.2), sjstats (>= 0.17.5), tidyr (>= 1.0.0)
bayestestR (>= 0.4.0), dplyr (>= 0.8.1), effectsize, forcats,
ggeffects (>= 0.13.0), glmmTMB, ggplot2 (>= 3.2.0), ggrepel,
knitr, insight (>= 0.6.0), lme4 (>= 1.1-12), magrittr, MASS,
modelr, parameters (>= 0.2.0), performance (>= 0.4.0), psych,
purrr, rlang, scales, sjlabelled (>= 1.1.1), sjmisc (>= 2.8.2),
sjstats (>= 0.17.7), tidyr (>= 1.0.0)
bayestestR (>= 0.4.0), dplyr (>= 0.8.1), effectsize, forcats,
ggeffects (>= 0.13.0), glmmTMB, ggplot2 (>= 3.2.0), ggrepel,
knitr, insight (>= 0.7.0), lme4 (>= 1.1-12), magrittr, MASS,
modelr, parameters (>= 0.2.0), performance (>= 0.4.0), psych,
purrr, rlang, scales, sjlabelled (>= 1.1.1), sjmisc (>= 2.8.2),
sjstats (>= 0.17.7), tidyr (>= 1.0.0)
graphics, grDevices, stats, utils, bayestestR, datawizard,
dplyr, effectsize, ggeffects, ggplot2 (>= 3.2.0), knitr,
insight, MASS, parameters, performance, purrr, rlang, scales,
sjlabelled (>= 1.1.2), sjmisc (>= 2.8.2), sjstats (>= 0.17.8),
tidyr (>= 1.0.0)
bayestestR (>= 0.5.0), dplyr (>= 0.8.1), effectsize, forcats,
ggeffects (>= 0.14.0), ggplot2 (>= 3.2.0), knitr, insight (>=
0.8.0), MASS, parameters (>= 0.4.0), performance (>= 0.4.3),
purrr, rlang, scales, sjlabelled (>= 1.1.2), sjmisc (>= 2.8.2),
sjstats (>= 0.17.8), tidyr (>= 1.0.0)
graphics, grDevices, stats, utils, bayestestR (>= 0.5.0),
dplyr (>= 0.8.1), effectsize, ggeffects (>= 0.14.0), ggplot2
(>= 3.2.0), knitr, insight (>= 0.8.0), MASS, parameters (>=
0.4.0), performance (>= 0.4.3), purrr, rlang, scales,
sjlabelled (>= 1.1.2), sjmisc (>= 2.8.2), sjstats (>= 0.17.8),
tidyr (>= 1.0.0)
graphics, grDevices, stats, utils, bayestestR (>= 0.6.0),
dplyr (>= 0.8.1), effectsize, ggeffects (>= 0.14.3), ggplot2
(>= 3.2.0), knitr, insight (>= 0.8.0), MASS, parameters (>=
0.7.0), performance (>= 0.4.3), purrr, rlang, scales,
sjlabelled (>= 1.1.2), sjmisc (>= 2.8.2), sjstats (>= 0.17.8),
tidyr (>= 1.0.0)
graphics, grDevices, stats, utils, bayestestR, dplyr,
effectsize, ggeffects, ggplot2 (>= 3.2.0), knitr, insight,
MASS, parameters, performance, purrr, rlang, scales, sjlabelled
(>= 1.1.2), sjmisc (>= 2.8.2), sjstats (>= 0.17.8), tidyr (>=
1.0.0)
reticulate, stats, mvtnorm, utils, rstudioapi, abind,
graphics, grDevices, Metrics, parallel, mgcv, Ternary, cli,
crayon, ggplot2, checkmate, mathjaxr
reticulate, stats, mvtnorm, utils, rstudioapi, abind,
graphics, grDevices, Metrics, parallel, mgcv, Ternary, cli,
crayon, ggplot2, checkmate, mathjaxr, ggtern
broom, dplyr (>= 0.7.1), haven (>= 1.0.0), magrittr,
prediction, purrr (>= 0.2.2.2), rlang, snakecase (>= 0.8.1),
tibble (>= 1.3.3), tidyselect, utils
broom (>= 0.4.5), dplyr (>= 0.7.1), haven (>= 1.1.2),
magrittr, prediction, purrr (>= 0.2.2.2), rlang, snakecase (>=
0.8.1), tibble (>= 1.3.3), tidyselect, utils
broom (>= 0.4.5), dplyr, haven (>= 1.1.2), magrittr,
prediction, purrr, rlang, snakecase, tibble, tidyselect, utils
broom (>= 0.4.5), dplyr, haven (>= 1.1.2), magrittr,
prediction, purrr, rlang, snakecase, utils
broom, dplyr, haven (>= 1.1.2), magrittr, prediction, purrr,
rlang, snakecase, utils
dplyr, haven (>= 1.1.2), insight, magrittr, purrr, rlang,
utils
broom, dplyr (>= 0.7.1), haven (>= 1.0.0), magrittr, nlme,
prediction, purrr (>= 0.2.2.2), snakecase, tibble (>= 1.3.3)
broom, dplyr (>= 0.7.1), haven (>= 1.0.0), magrittr,
prediction, purrr (>= 0.2.2.2), snakecase, tibble (>= 1.3.3),
utils
broom, dplyr (>= 0.7.1), haven (>= 1.0.0), magrittr,
prediction, purrr (>= 0.2.2.2), rlang, snakecase (>= 0.7.1),
tibble (>= 1.3.3), utils
broom, dplyr (>= 0.7.1), haven (>= 1.0.0), magrittr,
prediction, purrr (>= 0.2.2.2), rlang, snakecase (>= 0.8.1),
tibble (>= 1.3.3), utils
haven (>= 1.1.2), insight, magrittr, purrr, rlang, tidyselect,
utils
haven (>= 1.1.2), insight (>= 0.4.1), magrittr, purrr, rlang,
stats, tidyselect, tools, utils
haven (>= 1.1.2), insight (>= 0.7.0), stats, tools, utils
insight, datawizard, stats, tools, utils
coin, dplyr, haven, lme4, MASS, Matrix, nlme, stringdist (>=
0.9.2), tidyr
coin, dplyr, haven, lme4 (>= 1.1-10), MASS, Matrix, nlme,
stringdist (>= 0.9.2), tidyr
broom (>= 0.4.2), cli, crayon, dplyr (>= 0.7.1), haven (>=
1.0.0), magrittr, psych, purrr, rlang, sjlabelled (>= 1.0.5),
stringdist (>= 0.9.4), stringr (>= 1.2.0), tibble (>= 1.3.3),
tidyr (>= 0.7.0), tidyselect
broom (>= 0.4.2), cli, crayon, dplyr (>= 0.7.1), haven (>=
1.0.0), magrittr, pillar, psych, purrr, rlang, sjlabelled (>=
1.0.7), stringdist (>= 0.9.4), stringr (>= 1.2.0), tibble (>=
1.4.1), tidyr (>= 0.7.0), tidyselect
broom (>= 0.4.2), cli, crayon, dplyr (>= 0.7.1), haven (>=
1.0.0), magrittr, pillar, psych, purrr, rlang, sjlabelled (>=
1.0.8), stringdist (>= 0.9.4), stringr (>= 1.2.0), tibble (>=
1.4.1), tidyr (>= 0.7.0), tidyselect
broom (>= 0.4.2), crayon, dplyr (>= 0.7.1), haven (>= 1.0.0),
magrittr, pillar, purrr, rlang, sjlabelled (>= 1.0.8),
stringdist (>= 0.9.4), stringr (>= 1.2.0), tibble (>= 1.4.1),
tidyr (>= 0.7.0), tidyselect
broom (>= 0.4.5), crayon, dplyr, haven (>= 1.1.2), magrittr,
pillar, purrr, rlang, sjlabelled (>= 1.0.12), stringdist (>=
0.9.4), stringr (>= 1.2.0), tibble, tidyr, tidyselect
broom (>= 0.4.5), crayon, dplyr, haven (>= 1.1.2), magrittr,
methods, purrr, rlang, sjlabelled (>= 1.0.13), stringdist (>=
0.9.4), stringr (>= 1.2.0), tidyr
dplyr (>= 0.8.0), haven (>= 1.1.2), magrittr, methods, purrr,
rlang, sjlabelled (>= 1.0.17)
dplyr (>= 0.8.0), insight (>= 0.3.0), magrittr, methods,
purrr, rlang, sjlabelled (>= 1.1.0)
dplyr (>= 0.8.0), insight (>= 0.5.0), magrittr, methods,
purrr, rlang, sjlabelled (>= 1.1.1), stats, tidyselect (>=
0.2.5), utils
dplyr (>= 0.8.0), insight (>= 0.6.0), magrittr, methods,
purrr, rlang, sjlabelled (>= 1.1.1), stats, tidyselect (>=
0.2.5), utils
dplyr, insight, magrittr, methods, purrr, rlang, sjlabelled
(>= 1.1.1), stats, tidyselect, utils
bayesplot, broom, coin, dplyr (>= 0.7.1), lme4 (>= 1.1-12),
lmtest (>= 0.9-34), glmmTMB, MASS, Matrix, modelr, nlme, purrr
(>= 0.2.2), pwr, rlang, sandwich (>= 2.3-4), sjlabelled (>=
1.0.3), sjmisc (>= 2.6.1), tidyr (>= 0.7.0), tidyselect, tibble
(>= 1.3.3)
bayesplot, broom, coin, dplyr (>= 0.7.1), lme4 (>= 1.1-12),
lmtest (>= 0.9-34), glmmTMB, magrittr, MASS, Matrix, modelr,
nlme, prediction, purrr (>= 0.2.2), pwr, rlang, sandwich (>=
2.3-4), sjlabelled (>= 1.0.4), sjmisc (>= 2.6.1), tidyr (>=
0.7.0), tidyselect, tibble (>= 1.3.3)
bayesplot, broom, coin, dplyr (>= 0.7.1), lme4 (>= 1.1-12),
lmtest (>= 0.9-34), glmmTMB, magrittr, MASS, Matrix, modelr,
nlme, prediction, purrr (>= 0.2.2), pwr, rlang, sandwich (>=
2.3-4), sjlabelled (>= 1.0.5), sjmisc (>= 2.6.2), tidyr (>=
0.7.0), tidyselect, tibble (>= 1.3.3)
bayesplot, broom, cli, coin, crayon, dplyr (>= 0.7.1),
emmeans, lme4 (>= 1.1-12), lmtest (>= 0.9-34), glmmTMB, knitr,
magrittr, MASS, Matrix, modelr, nlme, prediction, purrr (>=
0.2.2), pwr, rlang, sandwich (>= 2.3-4), sjlabelled (>= 1.0.6),
sjmisc (>= 2.6.3), tidyr (>= 0.7.0), tidyselect, tibble (>=
1.3.3)
bayesplot, broom, cli, coin, crayon, dplyr (>= 0.7.1),
emmeans, lme4 (>= 1.1-12), lmtest (>= 0.9-34), glmmTMB,
magrittr, MASS, Matrix, modelr, nlme, prediction, purrr (>=
0.2.2), pwr, rlang, sandwich (>= 2.3-4), sjlabelled (>= 1.0.6),
sjmisc (>= 2.6.3), tidyr (>= 0.7.0), tidyselect, tibble (>=
1.3.3)
bayesplot, broom, cli, coin, crayon, dplyr (>= 0.7.1),
emmeans, lme4 (>= 1.1-12), lmtest (>= 0.9-34), glmmTMB,
magrittr, MASS, Matrix, modelr, nlme, prediction, purrr (>=
0.2.2), pwr, rlang, sandwich (>= 2.3-4), sjlabelled (>= 1.0.8),
sjmisc (>= 2.7.0), tidyr (>= 0.7.0), tidyselect, tibble (>=
1.3.3)
bayesplot, broom, coin, crayon, dplyr (>= 0.7.1), emmeans,
lme4 (>= 1.1-12), lmtest (>= 0.9-34), glmmTMB, magrittr, MASS,
Matrix, modelr, nlme, prediction, purrr (>= 0.2.2), pwr, rlang,
sandwich (>= 2.3-4), sjlabelled (>= 1.0.8), sjmisc (>= 2.7.0),
tidyr (>= 0.7.0), tidyselect, tibble (>= 1.3.3)
bayesplot, broom (>= 0.4.5), coin, crayon, dplyr (>= 0.7.1),
emmeans, lme4 (>= 1.1-12), lmtest (>= 0.9-34), glmmTMB (>=
0.2.2.0), magrittr, MASS, Matrix, modelr, nlme, prediction,
purrr (>= 0.2.2), pwr, rlang, sandwich (>= 2.3-4), sjlabelled
(>= 1.0.11), sjmisc (>= 2.7.3), tidyr (>= 0.7.0), tidyselect,
tibble (>= 1.3.3)
bayesplot, broom (>= 0.4.5), coin, crayon, dplyr, emmeans,
lme4, glmmTMB (>= 0.2.2.0), magrittr, MASS, Matrix, modelr,
nlme, prediction, purrr, pwr, rlang, sjlabelled (>= 1.0.13),
sjmisc (>= 2.7.3), tidyr
bayesplot, broom (>= 0.4.5), coin, crayon, dplyr, emmeans,
lme4, glmmTMB (>= 0.2.2.0), magrittr, MASS, Matrix, modelr,
nlme, purrr, pwr, rlang, sjlabelled (>= 1.0.14), sjmisc (>=
2.7.4), tidyr
bayesplot, broom (>= 0.4.5), coin, crayon, dplyr, emmeans,
lme4, glmmTMB (>= 0.2.2.0), magrittr, MASS, Matrix, modelr,
nlme, purrr, pwr, rlang, sjlabelled (>= 1.0.14), sjmisc (>=
2.7.5), tidyr
bayesplot, broom, coin, crayon, dplyr, emmeans, lme4, glmmTMB
(>= 0.2.2.0), magrittr, MASS, Matrix, modelr, nlme, purrr, pwr,
rlang, sjlabelled (>= 1.0.14), sjmisc (>= 2.7.5), tidyr
broom, dplyr, emmeans, insight, lme4, magrittr, MASS, Matrix,
modelr, purrr, rlang, sjlabelled (>= 1.0.17), sjmisc (>=
2.7.8), tidyr
bayestestR (>= 0.2.0), broom, dplyr, emmeans, insight (>=
0.3.0), lme4, magrittr, MASS, modelr, performance (>= 0.2.0),
purrr, rlang, sjlabelled (>= 1.0.17), sjmisc (>= 2.7.8), tidyr
bayestestR (>= 0.2.5), broom, dplyr (>= 0.8.1), emmeans,
insight (>= 0.4.1), lme4, magrittr, MASS, modelr, parameters
(>= 0.1.0), performance (>= 0.3.0), purrr, rlang, sjlabelled
(>= 1.1.0), sjmisc (>= 2.8.1), stats, tidyr, utils
bayestestR (>= 0.4.0), broom, dplyr (>= 0.8.1), emmeans,
insight (>= 0.6.0), lme4, magrittr, MASS, modelr, parameters
(>= 0.2.0), performance (>= 0.4.0), purrr, rlang, sjlabelled
(>= 1.1.1), sjmisc (>= 2.8.2), stats, tidyr
bayestestR (>= 0.4.0), broom, dplyr (>= 0.8.1), effectsize,
emmeans, insight (>= 0.8.0), lme4, magrittr, MASS, modelr,
parameters (>= 0.4.0), performance (>= 0.4.0), purrr, rlang,
sjlabelled (>= 1.1.1), sjmisc (>= 2.8.2), stats, tidyr
bayestestR, broom, dplyr, effectsize, emmeans, insight, lme4,
magrittr, MASS, modelr, parameters, performance, purrr, rlang,
sjlabelled, sjmisc, stats, tidyr
bayestestR, broom, datawizard, dplyr, effectsize, emmeans,
insight, lme4, magrittr, MASS, modelr, parameters, performance,
purrr, rlang, sjlabelled, sjmisc, stats, tidyr
coin, lme4 (>= 1.1-10), MASS, Matrix, nlme, sjmisc (>= 1.8)
coin, lme4 (>= 1.1-10), MASS, Matrix, nlme, sjmisc (>= 1.8),
tibble (>= 1.1.0)
data.table, kableExtra, magrittr, rlang, rvest, xml2
magrittr, dplyr, tidyr, readr, purrr, kinship2, corrr,
grDevices, tibble, rlang
adegenet, ape, hierfstat, pegas, markdown, methods, reshape2,
rmetasim (>= 3.0.0), strataG (>= 1.0), swfscMisc (>= 1.1)
magrittr, rlang, purrr, rstudioapi, glue, htmltools,
base64enc, jsonlite, shiny
magrittr, rlang, purrr, rstudioapi, glue, htmltools,
base64enc, jsonlite, shiny, methods
magrittr, rlang, purrr, rstudioapi, glue, htmltools,
base64enc, jsonlite, shiny, methods, V8
jpeg, png, readbitmap, downloader, imager, magrittr, methods,
stringr, dplyr
stats, MASS, Rcpp (>= 1.0.7), phangorn (>= 2.8.1)
knitr, stringi, crayon, packrat, utils, git2r
moments, clusterGeneration, doParallel, parallel, MASS,
mvtnorm
moments, clusterGeneration, doParallel, parallel, MASS,
mvtnorm, matrixcalc
dplyr, moments, mvtnorm, nlme, numDeriv, purrr, ggplot2
dplyr, ggplot2, moments, mvtnorm, nlme, numDeriv, purrr
dplyr, ggplot2, moments, mvtnorm, nlme, numDeriv, purrr, rlist
dplyr, ggplot2, moments, mvtnorm, nlme, numDeriv, purrr,
ggrepel, furrr, future, haven
dplyr (>= 0.7), magrittr, pander, purrr, rlang, stats, stringr
(>= 1.1), knitr, tibble (>= 0.6), tidyr (>= 0.7), tidyselect
dplyr (>= 0.7), magrittr, pander, purrr, rlang, stats, stringr
(>= 1.1), knitr (>= 1.2), tibble (>= 0.6), tidyr (>= 0.7),
tidyselect
cli, dplyr (>= 0.7), magrittr, pander, purrr, rlang, stats,
stringr (>= 1.1), knitr (>= 1.2), tibble (>= 0.6), tidyr (>=
0.7), tidyselect (>= 0.2.4)
dplyr (>= 0.7), magrittr, pander, purrr, rlang, stats,
stringr, knitr, tibble (>= 0.6), tidyr (>= 0.7), tidyselect
cli, crayon, dplyr (>= 0.8.0), knitr (>= 1.2), magrittr (>=
1.5), purrr, repr, rlang (>= 0.3.1), stats, stringr (>= 1.1),
tibble (>= 2.0.0), tidyr (>= 1.0), tidyselect (>= 0.2.5),
vctrs, withr
cli, crayon, dplyr (>= 0.8.0), knitr (>= 1.2), magrittr (>=
1.5), purrr, repr, rlang (>= 0.3.1), stats, stringr (>= 1.1),
tibble (>= 2.0.0), tidyr (>= 1.0), tidyselect (>= 0.2.5), withr
cli, crayon, dplyr (>= 0.8.0), knitr (>= 1.2), magrittr (>=
1.5), purrr, repr, rlang (>= 0.3.1), stats, stringr (>= 1.1),
tibble (>= 2.0.0), tidyr (>= 1.0), tidyselect (>= 1.0.0),
vctrs, withr
hash, LaplacesDemon, Matrix, numDeriv, spam
extraDistr, hash, LaplacesDemon, Matrix, mcmcse, numDeriv,
spam
extraDistr, hash, LaplacesDemon, Matrix, mcmcse, numDeriv,
spam, dfoptim
methods, plyr, Rcpp (>= 0.12.5), RcppParallel
slam (>= 0.1-31), clue (>= 0.3-39), cluster, stats, utils
cli, data.table, dplyr (>= 1.0.0), knitr, magrittr, modeltime,
parsnip (>= 0.1.4), purrr, rlang (>= 0.1.2), rsample (>=
0.0.9), tibble (>= 3.1.0), tidyr, tune (>= 0.1.3), utils,
workflowsets
cli, dplyr (>= 1.0.0), knitr, magrittr, modeltime, parsnip (>=
0.1.4), purrr, rlang (>= 0.1.2), rsample (>= 0.0.9), tibble (>=
3.1.0), tidyr, tune (>= 0.1.3), utils
utils, iterators, stats, nlme, lme4, Rcpp (>= 0.11.0),
rintrojs, shinythemes, foreach, doParallel, survival
utils, iterators, stats, nlme, lme4, Rcpp (>= 0.11.0),
rintrojs, shinythemes, foreach, doParallel, survival, knitr,
kableExtra
utils, iterators, stats, nlme, lme4, Rcpp (>= 0.11.0),
rintrojs, shinythemes, foreach, doParallel, survival, knitr,
kableExtra, doRNG
utils, iterators, stats, nlme, lme4, Rcpp (>= 0.11.0),
rintrojs, shinythemes, foreach, doParallel, survival, knitr,
kableExtra, doRNG, future, promises, shinyjs
utils, iterators, stats, nlme, lme4, Rcpp (>= 0.11.0),
rintrojs, shinythemes, foreach, doParallel, survival, knitr,
kableExtra, doRNG, future, promises, shinyjs, car, viridis
utils, iterators, stats, nlme, lme4, Rcpp (>= 0.11.0),
rintrojs, shinythemes, foreach, doParallel, survival, knitr,
kableExtra, doRNG, future, promises, shinyjs, car, viridis,
magrittr
utils, iterators, stats, nlme, lme4, Rcpp (>= 0.11.0),
rintrojs, shinythemes, foreach, doParallel, survival, knitr,
kableExtra, doRNG, future, promises, shinyjs, car, viridis,
magrittr, lmerTest
utils, iterators, stats, nlme, lme4, Rcpp (>= 0.11.0),
rintrojs, shinythemes, foreach, doParallel, survival, knitr,
kableExtra, doRNG, future, promises, shinyjs, car, viridis,
magrittr, lmerTest, methods, lazyeval
utils, iterators, stats, nlme, lme4, Rcpp (>= 0.11.0),
rintrojs, shinythemes, foreach, doParallel, survival, knitr,
kableExtra, doRNG, future, promises, shinyjs, car, viridis,
magrittr, lmerTest, methods, lazyeval, base64enc, crayon
utils, iterators, stats, lme4, Rcpp (>= 0.11.0), rintrojs,
shinythemes, foreach, doParallel, survival, doRNG, future,
promises, shinyjs, car, viridis, magrittr, lmerTest, methods,
lazyeval, progress, gt, scales
data.table, igraph, dplyr, ggplot2, ggrepel, stringr, maps
data.table, igraph, dplyr, ggplot2, ggrepel, stringr, maps,
httr
data.table, igraph, dplyr, ggplot2, ggrepel, stringr, maps,
httr, geosphere, leaflet
data.table, igraph, dplyr, ggplot2, ggrepel, stringr, maps,
httr, geosphere, leaflet, RCurl
pracma, png, plotrix, oce, utils, stats, graphics, grDevices,
MESS, RColorBrewer, numDeriv, parallel, foreach, doParallel,
rootSolve
png, oce, utils, stats, graphics, grDevices, MESS,
RColorBrewer, numDeriv, parallel, foreach, doParallel,
rootSolve, httr, plotrix, zoo
httr (>= 0.4.0), jsonlite, ggplot2, utils, methods, dplyr,
graphics, grDevices
httr (>= 1.4.2), jsonlite, ggplot2, utils, methods, dplyr (>=
1.0.0), graphics, grDevices
httr (>= 1.4.2), jsonlite, ggplot2, utils, methods, dplyr,
graphics, grDevices, xtable (>= 1.8.4), tibble, magrittr,
memoise (>= 2.0.0), cachem (>= 1.0.4)
cachem (>= 1.0.4), dplyr, ggplot2, graphics, grDevices, httr
(>= 1.4.2), lifecycle, jsonlite, magrittr, memoise (>= 2.0.0),
methods, rlang, tibble, utils, withr
cachem (>= 1.0.4), dplyr, ggplot2, graphics, grDevices, httr
(>= 1.4.2), jsonlite, magrittr, memoise (>= 2.0.0), methods,
purrr, reprex (>= 2.0.1), rlang, tibble, utils, withr
cachem (>= 1.0.4), dplyr, ggplot2, graphics, grDevices, httr
(>= 1.4.2), jsonlite, magrittr, memoise (>= 2.0.0), methods,
reprex (>= 2.0.1), rlang, tibble, utils, withr
cachem (>= 1.0.4), dplyr, ggplot2, graphics, grDevices, httr
(>= 1.4.2), jsonlite, magrittr, memoise (>= 2.0.0), methods,
rlang, tibble, utils, withr
Rcpp, RcppArmadillo, fda, fda.usc, matrixcalc, parallel,
matrixStats, MASS, plot3D, methods, cxxfunplus
jrc, cowplot, httpuv, jsonlite, scales, ggplot2
jrc (>= 0.2.0), cowplot, httpuv, jsonlite, scales, ggplot2
jrc (>= 0.4.0), cowplot, httpuv, jsonlite, scales, ggplot2
jrc (>= 0.5.0), cowplot, httpuv, jsonlite, scales, ggplot2
sf, stars, ggplot2, dplyr, purrr, readr, magrittr, reticulate,
tidyr, rnaturalearth, gganimate, png, ijtiff, shinyWidgets,
shiny, ape
httr, raster, sf (>= 0.9-0), utils, xml2
httr, methods, raster, sf (>= 0.9-0), utils, xml2
httr, methods, raster, s2, sf (>= 1.0), utils, xml2
htmlwidgets, tools, utils, base64enc, xml2
htmlwidgets, htmltools, tools, utils, base64enc, xml2
base64enc, htmltools, htmlwidgets, lifecycle, magick, tools,
utils, xml2
htmltools, htmlwidgets, lattice, raster, viridisLite
ltsa, methods, stats, capushe, sandwich, expm
codetools, crayon, methods, purrr, rlang, tibble
codetools, crayon, methods, purrr, rlang, tibble (>= 2.0.1)
graphics, stats, polynom, Hmisc, colorspace, nnls, grDevices,
MASS, weights, ellipse, wordcloud, candisc
graphics, stats, polynom, scatterplot3d, Hmisc, colorspace,
nnls
graphics, stats, polynom, Hmisc, colorspace, nnls, grDevices
graphics, stats, polynom, Hmisc, colorspace, nnls, grDevices,
MASS
graphics, stats, polynom, Hmisc, colorspace, nnls, grDevices,
MASS, weights
graphics, stats, polynom, Hmisc, colorspace, nnls, grDevices,
MASS, weights, ellipse, wordcloud, candisc, parallel, foreach,
doParallel
graphics, stats, polynom, Hmisc, nnls, grDevices, MASS,
weights, ellipse, wordcloud, candisc, parallel, foreach,
doParallel
spatstat, SpatialTools, plotrix, parallel, abind, pbapply, sp
spatstat.geom, spatstat.core, spatstat (>= 2.0-0), plotrix,
abind, pbapply, sp
spatstat.geom, spatstat.core, plotrix, abind, pbapply, sp
spatstat.geom, spatstat.core, smerc, plotrix, abind, pbapply,
sp
spatstat.geom, spatstat.random, spatstat.core, smerc, plotrix,
abind, pbapply, sp
spatstat.geom, spatstat.random, spatstat.explore, smerc,
plotrix, abind, pbapply, sp
stats, methods, Matrix, numDeriv, Rcpp (>= 0.12.2)
nloptr, Matrix, stats, Rcpp, RcppParallel, doParallel,
foreach, parallel, methods, numDeriv
nloptr, Matrix, stats, Rcpp, RcppParallel, doParallel,
foreach, parallel, doSNOW, methods, numDeriv, EnvStats
Matrix, gplots, gtools,PMA, elasticnet, pcaPP, igraph
PBSmapping, gWidgets2, gWidgets2RGtk2, gstat, lattice, plyr,
sp, maps, clues, cluster, spdep, marmap, shape, jpeg, grid,
ggplot2, sqldf, gsubfn, chron, reshape2, foreign, ROCR, caret,
nnls, mtsdi, gridExtra, rgeos, scales, grDevices, ggthemes,
vegan, rpart, ggrepel, rgdal, RColorBrewer, jsonlite, igraph,
mapproj
PBSmapping, gWidgets2, gWidgets2RGtk2, gstat, lattice, plyr,
sp, maps, cluster, spdep, marmap, shape, jpeg, grid, ggplot2,
sqldf, gsubfn, chron, reshape2, foreign, ROCR, caret, nnls,
mtsdi, gridExtra, rgeos, scales, grDevices, ggthemes, vegan,
rpart, ggrepel, rgdal, RColorBrewer, jsonlite, igraph, mapproj
functional, checkmate, magrittr, infotheo, MVN, adaptiveGPCA,
discretization, outliers, NoiseFiltersR, Boruta, FSelector,
lle, unbalanced, RoughSets, class, clusterSim, Amelia,
imbalance, DMwR, missForest, missMDA, denoiseR, VIM
bootSVD, data.table, foreach, Rfast, RSpectra, vegan, vroom,
Rcpp
MASS, survival, VGAM, stats, rlang, checkmate, abind
MASS, survival, VGAM, stats, rlang, checkmate, abind, brglm2
SpatialTools, fields, parallel, maps, smacpod
SpatialTools, fields, parallel, maps, smacpod, igraph, spdep,
utils
SpatialTools, fields, parallel, maps, smacpod, spdep,
matrixStats, sp
pbapply, maps, smacpod, matrixStats, randtoolbox, sp
ineq, truncnorm, lme4, MuMIn, formula.tools, mvtnorm,
spatstat, laeken, weights, mlmRev, Kernelheaping
ineq, truncnorm, lme4, MuMIn, formula.tools, mvtnorm,
spatstat, laeken, weights
ineq, truncnorm, lme4, MuMIn, formula.tools, mvtnorm,
spatstat, laeken, weights, graphics
ineq, truncnorm, lme4, MuMIn, formula.tools, mvtnorm, Hmisc,
laeken, weights, graphics
numDeriv, Rcpp, sf, mvtnorm, stats, Matrix
splines, RSQLite, DBI, methods, stats, graphics
graphics, grDevices, methods, RSQLite, spam, splines, stats
Rcpp (>= 0.12.18), foreach, doParallel, tidyr, Rdpack (>=
0.11)
Rcpp (>= 0.12.18), foreach, doParallel, dplyr, tidyr,
magrittr, ggplot2, Rdpack, rmarkdown
ggplot2, RColorBrewer, plot3D, emoa, Rcpp (>= 0.11.0)
ggplot2, RColorBrewer, plot3D, mco, Rcpp (>= 0.11.0)
ggplot2, RColorBrewer, plot3D, plotly, mco, Rcpp (>= 0.11.0)
ggplot2 (>= 2.2.1), RColorBrewer, plot3D, plotly, mco, Rcpp
(>= 0.11.0), RJSONIO
BBmisc (>= 1.6), ggplot2 (>= 2.2.1), RColorBrewer, plot3D,
plotly, mco, Rcpp (>= 0.11.0), RJSONIO
Rcpp (>= 0.12.3), stats, graphics, zoo, nloptr, polynom
Rcpp (>= 0.12.3), stats, graphics, zoo, nloptr, polynom, utils
Rcpp (>= 0.12.3), stats, graphics, zoo, nloptr, utils
Rcpp (>= 0.12.3), stats, graphics, forecast, nloptr, utils,
zoo
Rcpp (>= 0.12.3), stats, graphics, forecast (>= 7.0), nloptr,
utils, zoo
Rcpp (>= 0.12.3), stats, graphics, grDevices, forecast (>=
7.0), pracma, statmod, MASS, nloptr, utils, zoo
Rcpp (>= 0.12.3), stats, graphics, grDevices, pracma, statmod,
MASS, nloptr, utils, zoo
Rcpp (>= 0.12.3), stats, generics (>= 0.1.2), graphics,
grDevices, pracma, statmod, MASS, nloptr, utils, zoo
quantreg, SparseM, compiler, lmtest, stats, rgl, colorspace,
methods
methods, raster, rgeos, sf, stats, units
stats, utils, graphics, grDevices, Rcpp (>= 1.0.7), future (>=
1.22.1), future.apply (>= 1.8.1), progressr (>= 0.8.0),
progress (>= 1.2.2)
graphics, methods, revdbayes (>= 1.3.2), stats, SuppDists
graphics, methods, revdbayes (>= 1.1.0), stats, SuppDists
graphics, revdbayes (>= 1.1.0), stats, SuppDists
catdata, glmnet, graphics, MASS, Matrix, methods, mgcv,
parallel, RColorBrewer, Rcpp (>= 0.12.12), speedglm, stats
glmnet, graphics, MASS, Matrix, methods, mgcv, parallel,
RColorBrewer, Rcpp (>= 0.12.12), speedglm, stats
catdata, glmnet (>= 4.0), graphics, MASS, Matrix, methods,
mgcv, parallel, RColorBrewer, Rcpp (>= 0.12.12), speedglm,
stats
MASS, fmsb, DescTools, shiny, shinydashboard, sortable
mnormt, numDeriv, stats, grDevices, graphics, utils
mnormt (>= 1.5-4), numDeriv, stats, grDevices, graphics, utils
mnormt (>= 1.5-4), numDeriv, utils, quantreg
mnormt (>= 2.0.0), numDeriv, utils, quantreg
bayestestR, geepack, rjags, HDInterval, truncdist, condMVNorm,
pracma, cubature, tidyr, EnvStats
ggraph, graphlayouts, igraph, formatR, miniUI, rstudioapi,
ggplot2, shiny, DT, colourpicker
ggraph (>= 2.0.0), graphlayouts (>= 0.5.0), igraph, formatR,
miniUI, rstudioapi, ggplot2, shiny, colourpicker
ggraph (>= 2.0.0), graphlayouts (>= 0.5.0), igraph, formatR,
miniUI, rstudioapi, ggplot2, shiny, colourpicker, DT
keras, tensorflow, dplyr, purrr, forcats, tictoc, readr,
ggplot2, CORElearn, dbscan, stringr, reticulate
mgcv, ggplot2, gridExtra, zoo, plyr, reshape2, methods
shiny, xml2, httr, utils, stats, rvest, magrittr, wdman,
RSelenium, memoise
shiny, httr, utils, stats, rvest, magrittr, memoise
graphics, igraph, parallel, Rcpp, Rdpack, stats, VGAM
graphics, igraph, parallel, Rcpp, Rdpack, stats
parallel, snpStats, grid, ggplot2, grDevices, graphics, stats,
utils
ggplot2, raster, rlang, scales, sp, statmod, tidyr
ggplot2, raster, rlang, scales, sp, statmod, tidyr, dplyr,
stringr, DescTools, devtools, usethis
gridExtra, ellipse, scales, grid, stats, utils
gridExtra, ellipse, stats, utils, shiny, reshape2, ggrepel
gridExtra, ellipse, stats, utils, shiny, FactoMineR, ggrepel,
magrittr, htmlTable, stringr, RColorBrewer, reshape2, Matrix,
flextable, purrr, tibble, dplyr, forcats, rlang, tidyr
dplyr, data.table, magrittr, stats, utils
circlize, dplyr, data.table, ggplot2, magrittr, stats, utils
data.table, curl, httr, jsonlite, oai, wpp2015, countrycode,
stringr
data.table, curl, httr, jsonlite, oai, wpp2015, countrycode,
stringr, XML
data.table, curl, httr, jsonlite, oai, wpp2015, countrycode,
stringr, XML, lubridate
countrycode, curl, data.table, fields, grDevices, httr,
jsonlite, lubridate, oai, stringr, wpp2017, xml2
tidyverse, dplyr, magrittr, stringr, rlang, tidyselect, tidyr,
stats, devtools
dplyr, fs, graphics, magrittr, rlang, tibble
car, class, hexView, gbm, lattice, pls, splines, survival,
wavelets
methods, stats, pls, KernSmooth, wavelets, hexView, sp, GSIF
grDevices, graphics, stats, utils, plyr, Hmisc, XML, sp,
reshape
grDevices, graphics, stats, utils, plyr, Hmisc, XML, sp,
reshape2, raster
grDevices, graphics, stats, utils, plyr, Hmisc, xml2, sp,
reshape2, raster, curl
grDevices, graphics, stats, utils, plyr, Hmisc, XML, sp,
reshape2
aqp, grDevices, graphics, stats, utils, plyr, xml2, sp,
reshape2, raster, curl, lattice
aqp, grDevices, graphics, stats, utils, plyr, xml2, sp,
reshape2, raster, curl, lattice, methods, data.table
aqp, grDevices, graphics, stats, utils, plyr, xml2, sp,
reshape2, raster, curl, methods, data.table, DBI
aqp, grDevices, graphics, stats, utils, xml2, sp, raster,
curl, methods, data.table, DBI
aqp, grDevices, graphics, stats, utils, xml2, curl, methods,
data.table, DBI
grDevices, graphics, stats, utils, methods, aqp, data.table,
DBI
grDevices, graphics, stats, utils, methods, aqp, data.table,
DBI, curl
arm, caret, Cubist, e1071, FuzzyAHP, Hmisc, kernlab, maptools,
methods, randomForest, raster, rgdal, rpart, soiltexture, sp,
stats, utils
arm, caret, Cubist, e1071, FuzzyAHP, Hmisc, kernlab, maptools,
methods, nnet, randomForest, raster, rgdal, rpart, soiltexture,
sp, stats, utils
arm, caret, Cubist, deSolve, e1071, FuzzyAHP, Hmisc, kernlab,
maptools, methods, nnet, quantregForest, qrnn,randomForest,
ranger,raster, rgdal, rpart, soiltexture, sp, stats, utils
arm, caret, Cubist, deSolve, e1071, FuzzyAHP, Hmisc, kernlab,
maptools, methods, nlme,nnet, quantregForest,
qrnn,randomForest, ranger,raster, rgdal, rpart, soiltexture,
sp, stats, utils
arm, caret, Cubist,deSolve, e1071, FuzzyAHP, googledrive,
Hmisc, kernlab,methods,nnet,quantregForest, qrnn,randomForest,
ranger, raster,png, rgdal, rpart, soiltexture, sp,stats
arm, caret, Cubist, deSolve, e1071, FuzzyAHP, googledrive,
Hmisc, kernlab, methods, nnet, png, qrnn, quantregForest,
randomForest, ranger, raster, rpart, soiltexture, sp, stats
mgcv, quadprog(>= 1.5-7), parallel, Rmpfr(>= 0.7-2),
SoilHyP(>= 0.1.3)
utils, stats, graphics, boot, grDevices, datasets, MASS,
shiny, shinydashboard, fields
utils, stats, graphics, boot, grDevices, datasets, MASS,
shiny, rhandsontable, shinydashboard, fields
stats, dplyr, rlang, tidyr, utils, purrr, data.table, ggplot2,
ggpp, nlstools, minpack.lm, modelr, AICcmodavg
RColorBrewer, graphics, grDevices, stats, methods
methods, plyr (>= 1.8.1), ggplot2, data.table
plyr, httr, XML, data.table, assertthat, rjson
methods, utils, plyr, httr, XML, assertthat, rjson
stats, utils, methods, dplyr, plyr, httr (>= 1.0.0), XML,
jsonlite
httr, jsonlite, dplyr (>= 0.5.0), mime, digest
hexbin, class, kohonen, som, methods, graphics, grDevices,
stats, utils
tuneR, seewave, methods, ggplot2, jsonlite
tuneR, seewave, methods, ggplot2, jsonlite, mime, suncalc, hms
XML, RCurl, zoo, dplyr (>= 0.2), stringr
htmltools, htmlwidgets, learnr (>= 0.10.0), shiny, assertthat,
jsonlite, utils, ellipsis
htmltools, htmlwidgets, learnr (>= 0.10.0), shiny, assertthat,
jsonlite, utils, ellipsis, rlang
RColorBrewer, RgoogleMaps, XML, gdata, ggplot2, maptools,
plyr, png, reshape, reshape2, rgdal, rgl
dlstats, dplyr, ggplot2, gh, tidyr, purrr, rlang, utils,
rvest, xml2, lubridate, checkmate
httr, methods, sp, stringr, xml2 (>= 1.2.2),
dplyr, httr, methods, parsedate, sp, stats, stringr, uuid,
xml2 (>= 1.2.2),
seewave, DBI, dplyr, dbplyr, RSQLite, signal, tuneR, zoo,
magrittr, shinyFiles, shiny, utils, graphics, generics, keras,
shinyjs
pracma, oce, ineq, vegan, tuneR, seewave
parallel, pracma, oce, ineq, vegan, tuneR, seewave
stats, graphics, utils, tuneR, seewave, zoo, shiny, shinyBS,
reshape2, mvtnorm, plyr, dtw, grid, phonTools
stats, graphics, utils, tuneR, seewave, zoo, shiny, reshape2,
mvtnorm, plyr, dtw, phonTools
stats, graphics, utils, tuneR, seewave (>= 2.1.0), zoo, shiny,
reshape2, mvtnorm, plyr, dtw, phonTools
stats, graphics, utils, tuneR, seewave (>= 2.1.0), zoo,
reshape2, mvtnorm, dtw, phonTools, shiny, shinyjs
stats, graphics, utils, tuneR, seewave (>= 2.1.6), zoo,
reshape2, mvtnorm, dtw, phonTools, signal, shiny, shinyjs
stats (>= 4.0.0), graphics, utils, tuneR, seewave (>= 2.1.6),
zoo, reshape2, mvtnorm, dtw, phonTools, signal, shiny, shinyjs
stats (>= 4.0.0), graphics, utils, tuneR, seewave (>= 2.1.6),
zoo, reshape2, mvtnorm, dtw, phonTools, signal, shiny, shinyjs,
foreach, doParallel
stats (>= 4.0.0), graphics, utils, tuneR, seewave (>= 2.1.6),
zoo, mvtnorm, dtw, phonTools, signal, shiny, shinyjs, foreach,
doParallel
gtools, hashmap, uuid, R6, cluster, stats, gplots, SPIn,
grDevices
gtools, hashmap, R6, cluster, stats, gplots, SPIn, grDevices,
reshape2
methods, Rcpp (>= 1.0.4), gtools, R6, cluster, stats, gplots,
SPIn, grDevices, reshape2
broom, dplyr, ggplot2, gridExtra, lmtest, lubridate, magrittr,
mclust, purrr, randomForest, sandwich, stats, stringr,
strucchange, tidyr, xts, zoo
broom, dplyr, future, furrr, ggplot2, gridExtra, lmtest,
lubridate, magrittr, mclust, purrr, randomForest, sandwich,
stats, stringr, strucchange, tidyr, xts, zoo
utils, stats, graphics, grDevices, methods, lattice, grid
utils, stats, graphics, grDevices, lattice, grid
MASS, Matrix, ScottKnott, car, gtools, multcomp, multcompView,
mvtnorm, devtools, DT, shinyBS, xtable, shinythemes, rmarkdown,
knitr, spdep, ape, spatialreg
MASS, Matrix, ScottKnott, car, gtools, multcomp, multcompView,
mvtnorm, DT, shinyBS, xtable, shinythemes, rmarkdown, knitr,
spdep, ape, spatialreg, shinycssloaders
graphics, grDevices, msm (>= 1.0.0), mvtnorm (>= 1.0-0),
pgdraw (>= 1.0), Rcpp (>= 0.12.9), stats, utils
Rcpp (>= 0.11.1), survival, coda, methods
Rcpp (>= 0.11.1), survival, coda, methods, fields, automap, sp
Rcpp (>= 0.11.1), survival, coda, methods, fields
Rcpp (>= 0.11.1), survival, coda, methods, MASS, fields
Rcpp (>= 0.11.1), survival, coda, methods, MASS, fields,
splines
graphics, grDevices, msm (>= 1.0.0), mvtnorm (>= 1.0-0), Rcpp
(>= 0.12.9), stats, utils
data.table, dplyr, gdistance, ggplot2, parallel, raster,
smatr, viridisLite, magrittr, rlang, sp, gstat
data.table, dplyr, ggplot2, parallel, raster, smatr,
viridisLite, magrittr, rlang, sp, gstat
Rcpp (>= 0.12.4), stats, truncnorm, Rsolnp, spdep, Matrix
Rcpp (>= 0.12.4), stats, truncnorm, Rsolnp, spdep, Matrix,
nleqslv
Rcpp (>= 0.12.4), stats, truncnorm, Rsolnp, spdep, Matrix,
nleqslv, methods
stats, coda, abind, RANN, lme4, foreach, doParallel, spBayes
stats, coda, abind, RANN, lme4, foreach, doParallel, spBayes,
methods
stats, coda, abind, RANN, lme4, foreach, doParallel, methods
coda, sp, spacetime, grDevices, graphics, stats, utils
coda, sp, grDevices, graphics, stats, utils
coda, sp, spacetime, extraDistr, grDevices, graphics, stats,
utils
Matrix, MASS, boot, lpSolveAPI (>= 5.5.0.14)
methods, stats, graphics, Matrix, MASS, lpSolveAPI (>=
5.5.0.14), proxy, geometry (>= 0.3.6), Rcpp (>= 0.11.0), nlme,
mvtnorm, nloptr
Matrix, MASS, lpSolveAPI (>= 5.5.0.14), proxy, geometry, Rcpp
(>= 0.11.0)
stats, graphics, Matrix, MASS, lpSolveAPI (>= 5.5.0.14),
proxy, geometry, Rcpp (>= 0.11.0), nlme
methods, stats, graphics, Matrix, MASS, lpSolveAPI (>=
5.5.0.14), proxy, geometry, Rcpp (>= 0.11.0), nlme, mvtnorm
methods, stats, graphics, Matrix, MASS, lpSolveAPI (>=
5.5.0.14), proxy, geometry, Rcpp (>= 0.11.0), nlme, mvtnorm,
nloptr
methods, stats, graphics, Matrix, MASS, proxy, Rcpp (>=
0.11.0), nlme, nloptr
methods, stats, graphics, Matrix, MASS, proxy, Rcpp (>=
0.12.10), nlme, nloptr
methods, stats, graphics, Matrix, MASS, proxy, Rcpp (>=
0.12.10), nlme, nloptr, pbapply
methods, stats, graphics, Matrix, MASS, proxy, Rcpp (>=
0.12.10), nlme, nloptr, minqa, pbapply, crayon, gmp
methods, stats, graphics, Matrix, MASS, proxy, Rcpp (>=
0.12.10), nlme, nloptr, minqa, pbapply, crayon, gmp (>= 0.6.0),
ROI, boot
methods, stats, graphics, Matrix, MASS, proxy, Rcpp (>=
0.12.10), nlme, nloptr, minqa, pbapply, crayon, gmp (>= 0.6.0),
ROI, boot, geometry (>= 0.4.0)
methods, stats, graphics, Matrix, MASS, proxy, Rcpp (>=
0.12.10), nlme, nloptr, minqa, pbapply, crayon, gmp (>= 0.6.0),
ROI, boot, geometry (>= 0.4.0), numDeriv
methods, stats, graphics, Matrix, MASS, proxy, Rcpp (>=
0.12.10), nlme, nloptr, minqa, pbapply, crayon, gmp, ROI,
ROI.plugin.glpk
methods, stats, graphics, Matrix, MASS, proxy, Rcpp (>=
0.12.10), nlme, nloptr, minqa, pbapply, crayon, gmp, ROI, boot
MASS, permute, RcppTN, Rfast, sna, vegan
MASS, mclust (>= 5.3), permute, RcppTN, Rfast, sna, vegan
crsuggest, dplyr, ggraph, ggplot2, igraph, magrittr, sf,
spatstat.core, spatstat.geom, ggthemes, methods
crsuggest, dplyr, ggraph, ggplot2, igraph, magrittr, sf,
spatstat.random, spatstat.geom, ggthemes
xts (>= 0.8-8), zoo (>= 1.7-9), intervals, lattice
methods, sp (>= 1.0-14), zoo (>= 1.7-9), xts (>= 0.8-8),
intervals, lattice, rgeos
graphics, utils, stats, methods, lattice, sp (>= 1.1-0), zoo
(>= 1.7-9), xts (>= 0.8-8), intervals
httr, raster, rayshader, magrittr, png, jsonlite, rgdal
methods, spdep, foreach, iterators, lme4, nlme, Matrix
RandomFields, abind, MCMCpack, sparr, mvtnorm
Rcpp (>= 1.0.3), FNN, dplyr, magrittr, rlang, tibble
abind, plyr, foreach, pracma, stringr, complexplus, signal,
matrixcalc, minpack.lm, nnls, utils, graphics, grDevices,
smoother, svd
abind, plyr, foreach, pracma, stringr, complexplus, signal,
matrixcalc, minpack.lm, nnls, utils, graphics, grDevices,
smoother, svd, tkrplot, readr, magrittr, tibble
abind, plyr, foreach, pracma, stringr, complexplus, signal,
matrixcalc, minpack.lm, nnls, utils, graphics, grDevices,
smoother, svd, readr, magrittr, ptw, viridisLite, mmand,
RNifti, RNiftyReg, fields, MASS, shiny, miniUI, oro.dicom,
tibble
abind, plyr, foreach, pracma, stringr, complexplus, signal,
matrixcalc, minpack.lm, nnls, utils, graphics, grDevices,
smoother, svd, tkrplot
abind, plyr, foreach, pracma, stringr, complexplus, signal,
matrixcalc, minpack.lm, nnls, utils, graphics, grDevices,
smoother, svd, readr, magrittr, ptw, viridisLite, mmand,
RNifti, RNiftyReg, fields, MASS, shiny, miniUI, oro.dicom,
numDeriv, nloptr, lsei, tibble
abind, plyr, foreach, pracma, stringr, complexplus, signal,
matrixcalc, minpack.lm, nnls, utils, graphics, grDevices,
smoother, readr, magrittr, ptw, mmand, RNifti, RNiftyReg,
fields, MASS, numDeriv, nloptr, irlba, tibble, jsonlite
abind, plyr, foreach, pracma, stringr, complexplus, signal,
minpack.lm, utils, graphics, grDevices, smoother, magrittr,
ptw, mmand, RNifti, RNiftyReg, fields, numDeriv, nloptr, irlba,
jsonlite
abind, plyr, foreach, pracma, stringr, expm, signal,
minpack.lm, utils, graphics, grDevices, smoother, magrittr,
ptw, mmand, RNifti, RNiftyReg, fields, numDeriv, nloptr, irlba,
jsonlite
abind, plyr, foreach, pracma, stringr, complexplus, signal,
matrixcalc, minpack.lm, nnls, utils, graphics, grDevices,
smoother, readr, magrittr, ptw, viridisLite, mmand, RNifti,
RNiftyReg, fields, MASS, shiny, miniUI, oro.dicom, numDeriv,
nloptr, lsei, irlba, tibble
abind, plyr, pracma, stringr, expm, signal, minpack.lm, utils,
graphics, grDevices, smoother, magrittr, ptw, mmand, RNifti,
RNiftyReg, fields, numDeriv, nloptr, irlba, jsonlite
abind, plyr, foreach, pracma, stringr, complexplus, signal,
matrixcalc, minpack.lm, nnls, utils, graphics, grDevices,
smoother, readr, magrittr, ptw, viridisLite, mmand, RNifti,
RNiftyReg, fields, MASS, shiny, miniUI, oro.dicom, numDeriv,
nloptr, irlba, tibble
abind, plyr, foreach, pracma, stringr, complexplus, signal,
matrixcalc, minpack.lm, nnls, utils, graphics, grDevices,
smoother, readr, magrittr, ptw, viridisLite, mmand, RNifti,
RNiftyReg, fields, MASS, shiny, miniUI, oro.dicom, numDeriv,
nloptr, irlba, tibble, jsonlite
abind, plyr, foreach, pracma, stringr, complexplus, signal,
matrixcalc, minpack.lm, nnls, utils, graphics, grDevices,
smoother, readr, magrittr, ptw, mmand, RNifti, RNiftyReg,
fields, MASS, oro.dicom, numDeriv, nloptr, irlba, tibble,
jsonlite
abind, plyr, pracma, stringr, expm, signal, minpack.lm, utils,
graphics, grDevices, smoother, ptw, mmand, RNifti, RNiftyReg,
fields, numDeriv, nloptr, irlba, jsonlite
dplyr, sparklyr (>= 1.0.1), sparklyr.nested, utils
methods, magrittr, lazyeval (>= 0.2.0), tibble (>= 1.1), dplyr
(>= 0.5.0), DBI (>= 0.4.1), readr (>= 0.2.0), digest, config,
rappdirs, assertthat, rprojroot, withr
methods, lazyeval (>= 0.2.0), dplyr (>= 0.5.0), DBI (>=
0.4.1), readr (>= 0.2.0), digest, config, rappdirs, assertthat,
rprojroot, withr, httr, jsonlite, base64enc
methods, lazyeval (>= 0.2.0), dplyr (>= 0.5.0), DBI (>= 0.6),
readr (>= 0.2.0), digest, config, rappdirs, assertthat,
rprojroot, withr, httr, jsonlite, base64enc
methods, lazyeval (>= 0.2.0), dplyr (>= 0.5.0), DBI (>= 0.6),
readr (>= 0.2.0), digest, config, rappdirs, assertthat,
rprojroot, withr, httr, jsonlite, base64enc, rstudioapi, shiny
(>= 1.0.1)
methods, lazyeval (>= 0.2.0), dplyr (>= 0.7.0), dbplyr (>=
1.0.0), DBI (>= 0.6), readr (>= 0.2.0), digest, config,
rappdirs, assertthat, rprojroot, withr, httr, jsonlite,
base64enc, rlang (>= 0.1), rstudioapi, shiny (>= 1.0.1)
assertthat, base64enc, broom, config (>= 0.2), DBI (>= 0.6-1),
dplyr (>= 0.7.2), dbplyr (>= 1.1.0), digest, httr (>= 1.2.1),
jsonlite (>= 1.4), lazyeval (>= 0.2.0), methods, rappdirs,
readr (>= 1.1.0), rlang (>= 0.1), rprojroot, rstudioapi, shiny
(>= 1.0.1), withr, xml2
assertthat, base64enc, broom, config (>= 0.2), DBI (>= 0.6-1),
dplyr (>= 0.7.2), dbplyr (>= 1.1.0), digest, httr (>= 1.2.1),
jsonlite (>= 1.4), lazyeval (>= 0.2.0), methods, openssl (>=
0.8), rappdirs, readr (>= 1.1.0), rlang (>= 0.1), rprojroot,
rstudioapi, shiny (>= 1.0.1), withr, xml2
assertthat, base64enc, broom, config (>= 0.2), DBI (>= 0.6-1),
dplyr (>= 0.7.2), dbplyr (>= 1.1.0), digest, httr (>= 1.2.1),
jsonlite (>= 1.4), lazyeval (>= 0.2.0), methods, openssl (>=
0.8), rappdirs, readr (>= 1.1.0), rlang (>= 0.1.4), rprojroot,
rstudioapi, shiny (>= 1.0.1), withr, xml2
assertthat, base64enc, broom, config (>= 0.2), DBI (>= 0.6-1),
dplyr (>= 0.7.2), dbplyr (>= 1.1.0), digest, httr (>= 1.2.1),
jsonlite (>= 1.4), lazyeval (>= 0.2.0), methods, openssl (>=
0.8), rappdirs, readr (>= 1.1.0), rlang (>= 0.1.4), rprojroot,
rstudioapi, shiny (>= 1.0.1), withr, xml2, tidyr
assertthat, base64enc, broom, config (>= 0.2), DBI (>= 0.6-1),
dplyr (>= 0.7.2), dbplyr (>= 1.1.0), digest, httr (>= 1.2.1),
jsonlite (>= 1.4), lazyeval (>= 0.2.0), methods, openssl (>=
0.8), r2d3, rappdirs, rlang (>= 0.1.4), rprojroot, rstudioapi,
shiny (>= 1.0.1), withr, xml2, tibble, tidyr, purrr, forge
assertthat, base64enc, broom, config (>= 0.2), DBI (>= 0.6-1),
dplyr (>= 0.7.2), dbplyr (>= 1.1.0), digest, httr (>= 1.2.1),
jsonlite (>= 1.4), lazyeval (>= 0.2.0), methods, openssl (>=
0.8), r2d3, rappdirs, rlang (>= 0.1.4), rprojroot, rstudioapi
(>= 0.6), shiny (>= 1.0.1), withr, xml2, tibble, tidyr, purrr,
forge
assertthat, base64enc, config (>= 0.2), DBI (>= 0.6-1), dplyr
(>= 0.7.2), dbplyr (>= 1.1.0), digest, forge, generics, httr
(>= 1.2.1), jsonlite (>= 1.4), methods, openssl (>= 0.8),
purrr, r2d3, rappdirs, rlang (>= 0.1.4), rprojroot, rstudioapi
(>= 0.6), tibble, tidyr, withr, xml2, ellipsis (>= 0.1.0)
assertthat, base64enc, config (>= 0.2), DBI (>= 0.6-1), dplyr
(>= 0.7.2), dbplyr (>= 1.1.0), digest, forge, generics, httr
(>= 1.2.1), jsonlite (>= 1.4), methods, openssl (>= 0.8),
purrr, r2d3, rappdirs, rlang (>= 0.1.4), rprojroot, rstudioapi
(>= 0.10), tibble, tidyr, withr, xml2, ellipsis (>= 0.1.0)
assertthat, base64enc, config (>= 0.2), DBI (>= 0.6-1), dplyr
(>= 0.7.2), dbplyr (>= 1.1.0), digest, forge, generics,
globals, httr (>= 1.2.1), jsonlite (>= 1.4), methods, openssl
(>= 0.8), purrr, r2d3, rappdirs, rjson (>= 0.2.20), rlang (>=
0.1.4), rprojroot, rstudioapi (>= 0.10), tibble, tidyr, withr,
xml2, ellipsis (>= 0.1.0)
assertthat, base64enc, config (>= 0.2), DBI (>= 0.6-1), dplyr
(>= 0.7.2), dbplyr (>= 1.1.0), digest, forge, generics,
globals, httr (>= 1.2.1), jsonlite (>= 1.4), methods, openssl
(>= 0.8), purrr, r2d3, rappdirs, rjson (>= 0.2.20), rlang (>=
0.1.4), rprojroot, rstudioapi (>= 0.10), tibble, tidyr, uuid,
withr, xml2, ellipsis (>= 0.1.0)
assertthat, base64enc, config (>= 0.2), DBI (>= 0.6-1), dplyr
(>= 0.7.2), dbplyr (>= 1.1.0), digest, forge, generics,
globals, glue, httr (>= 1.2.1), jsonlite (>= 1.4), lifecycle,
methods, openssl (>= 0.8), purrr, r2d3, rappdirs, rjson (>=
0.2.20), rlang (>= 0.1.4), rprojroot, rstudioapi (>= 0.10),
stringr, tibble, tidyr, tidyselect, vctrs, uuid, withr, xml2,
ellipsis (>= 0.1.0)
assertthat, base64enc, config (>= 0.2), DBI (>= 0.6-1), dplyr
(>= 0.7.2), dbplyr (>= 1.1.0), digest, forge, generics,
globals, glue, httr (>= 1.2.1), jsonlite (>= 1.4), lifecycle,
methods, openssl (>= 0.8), purrr, r2d3, rappdirs, rlang (>=
0.1.4), rprojroot, rstudioapi (>= 0.10), stringr, tibble,
tidyr, tidyselect, vctrs, uuid, withr, xml2, ellipsis (>=
0.1.0)
assertthat, base64enc, blob, config (>= 0.2), DBI (>= 0.6-1),
dbplyr (>= 1.1.0), digest, dplyr (>= 0.7.2), ellipsis (>=
0.1.0), forge, generics, globals, glue, httr (>= 1.2.1),
jsonlite (>= 1.4), lifecycle, methods, openssl (>= 0.8), purrr,
r2d3, rappdirs, rlang (>= 0.1.4), rprojroot, rstudioapi (>=
0.10), stringr, tibble, tidyr, tidyselect, uuid, vctrs, withr,
xml2
assertthat, base64enc, blob, config (>= 0.2), DBI (>= 0.6-1),
dbplyr (>= 1.1.0), digest, dplyr (>= 0.7.2), ellipsis (>=
0.1.0), forge, generics, globals, glue, httr (>= 1.2.1),
jsonlite (>= 1.4), lifecycle, methods, openssl (>= 0.8), purrr,
r2d3, rappdirs, rlang (>= 0.1.4), rprojroot, rstudioapi (>=
0.10), stringr, tibble, tidyr (>= 0.3.0), tidyselect, uuid,
vctrs, withr, xml2
assertthat, base64enc, blob, config (>= 0.2), DBI (>= 0.6-1),
dbplyr (>= 1.1.0), digest, dplyr (>= 0.7.2), ellipsis (>=
0.1.0), forge, generics, globals, glue, httr (>= 1.2.1),
jsonlite (>= 1.4), lifecycle, methods, openssl (>= 0.8), purrr,
r2d3, rappdirs, rlang (>= 0.1.4), rprojroot, rstudioapi (>=
0.10), stringr, tibble, tidyr (>= 1.2.0), tidyselect, uuid,
vctrs, withr, xml2
assertthat, base64enc, blob, config (>= 0.2), DBI (>= 0.6-1),
dbplyr (>= 2.1.1), digest, dplyr (>= 0.7.2), ellipsis (>=
0.1.0), forge, generics, globals, glue, httr (>= 1.2.1),
jsonlite (>= 1.4), methods, openssl (>= 0.8), purrr, r2d3,
rappdirs, rlang (>= 0.1.4), rprojroot, rstudioapi (>= 0.10),
tibble, tidyr (>= 1.2.0), tidyselect, uuid, vctrs, withr, xml2
assertthat, base64enc, config (>= 0.2), DBI (>= 1.0.0), dbplyr
(>= 2.2.1), digest, dplyr (>= 1.0.9), ellipsis (>= 0.1.0),
forge, generics, globals, glue, httr (>= 1.2.1), jsonlite (>=
1.4), methods, openssl (>= 0.8), purrr, r2d3, rappdirs, rlang
(>= 0.1.4), rprojroot, rstudioapi (>= 0.10), tibble, tidyr (>=
1.2.0), tidyselect, uuid, vctrs, withr, xml2
dbplyr, dplyr, sparklyr (>= 1.3), rlang, tibble
sparklyr, jsonlite, listviewer, dplyr, rlang, purrr
spatstat.utils, doParallel, parallel, foreach, misc3d
spatstat.utils, spatstat.geom, spatstat.core, doParallel,
parallel, foreach, misc3d
spatstat.utils, spatstat.geom, spatstat.core, spatstat.random,
doParallel, parallel, foreach, misc3d
spatstat.utils, spatstat.geom, spatstat.explore,
spatstat.random, doParallel, parallel, foreach, misc3d
doParallel, fields, foreach, raster, sp, sparr
doParallel, fields, foreach, graphics, grDevices, parallel,
raster, sp, sparr, stats, utils
doFuture, doRNG, fields, foreach, future, graphics, grDevices,
iterators, lifecycle, raster, sp, sparr, stats
doFuture, doRNG, fields, foreach, future, graphics, grDevices,
iterators, lifecycle, raster, sp, sparr, spatstat.geom,
spatstat.random, stats
methods, parallel, MASS, Matrix, data.table
ncvreg, rlang, magrittr, dplyr, recipes (>= 1.0.0)
bdsmatrix, corpcor, dplyr, ggplot2, mvtnorm
bdsmatrix, corpcor, dplyr, ggplot2, mvtnorm, rlang
Matrix, RSpectra, assertthat, methods, tidyr, ggplot2,
magrittr, rlang, dotCall64
assertthat, dotCall64, ggplot2, magrittr, Matrix, methods,
rlang, RSpectra, tidyr
cli, dotCall64, ggplot2, magrittr, Matrix, methods, rlang,
RSpectra, tidyr
Rcpp (>= 0.11.0), msm, VGAM, MCMCpack, coda, glmnet,
gridExtra, grid
Rcpp (>= 0.11.0), msm, VGAM, MCMCpack, coda, glmnet,
gridExtra, grid, GIGrvg
Matrix, ncvreg, parallel, doParallel, glmnet, ggplot2,
reshape2, grid, mvtnorm, flare, picasso
Matrix, ncvreg, parallel, doParallel, glmnet, ggplot2,
reshape2, grid, mvtnorm, picasso, corpcor,
Matrix, ncvreg, parallel, glmnet, MTS, ggplot2, reshape2,
grid, caret
Matrix, ncvreg, parallel, doParallel, glmnet, MTS, ggplot2,
reshape2, grid, caret
Matrix, ncvreg, parallel, doParallel, glmnet, ggplot2,
reshape2, grid, mvtnorm
Rcpp (>= 1.0.5), selectiveInference (>= 1.2.5), glmnet (>=
4.0-2), stats
lhs, gplots, XML, plotrix, mlegp, ggplot2, neuralnet, psych,
mco
doParallel (>= 1.0.11), parallel, foreach, dplyr, tidyr,
stringr, ggplot2, abind, rlang, magrittr
foreach, dplyr, tidyr, stringr, ggplot2, abind, rlang,
magrittr
foreach, dplyr, tidyr, stringr, abind, rlang, magrittr
foreach, dplyr, tidyr, stringr, abind, rlang, magrittr,
ggplot2
ggplot2, scales, sf, dplyr, lwgeom, cowplot, purrr
pracma, igraph, matrixStats, MASS, Rtsne, class, utils, knitr,
rmarkdown
pracma, igraph, matrixStats, MASS, Rtsne, class, utils, knitr,
rmarkdown, irlba
RANN, rms, sp (>= 1.0-15), raster (>= 2.3-10), spatstat (>=
1.35-0), cluster, spdep, SDMTools, RCurl, rgeos
sp, raster, spatstat, cluster, spdep, SDMTools, readr, RCurl,
rgeos, RANN, rms, yaImpute, SpatialPack, MASS, rgdal, methods
sp, sf, raster, spatstat, cluster, spdep, SDMTools, readr,
RCurl, rgeos, RANN, rms, yaImpute, SpatialPack, MASS, EnvStats,
maptools, methods
sp, sf, raster, spatstat, cluster, spdep, SDMTools, readr,
RCurl, rgeos, RANN, rms, yaImpute, SpatialPack (>= 0.3), MASS,
EnvStats, maptools, methods
dplyr, fasterize, sp, sf, raster, spatstat, cluster, spdep,
SDMTools, readr, RCurl, rgeos, RANN, rms, yaImpute, SpatialPack
(>= 0.3), MASS, EnvStats, maptools, methods
dplyr, fasterize, sp, sf, raster, spatstat, cluster, spdep,
readr, RCurl, rgeos, RANN, rms, yaImpute, SpatialPack (>= 0.3),
MASS, EnvStats, maptools, methods, velox
dplyr, exactextractr, sp, sf, raster, spatstat, cluster,
spdep, readr, RCurl, rgeos, RANN, rms, yaImpute, SpatialPack
(>= 0.3), MASS, mgcv, EnvStats, maptools, methods
sp, sf, raster, spatstat, spdep, rgeos, MASS, methods
sp, sf, raster, spatstat.geom, spatstat.core, spdep, rgeos,
MASS, methods
sf, terra, spatstat.geom (>= 3.0-3), spatstat.explore, spdep,
ks, cluster, readr, RCurl, RANN, rms, yaImpute, mgcv, EnvStats,
SpatialPack (>= 0.3), MASS
dplyr, ggplot2, magrittr, stats, tibble, utils, foreach,
doParallel, ranger, rlang, tidyr, tidyselect, huxtable,
patchwork, viridis
magrittr, dplyr, tidyr, ggplot2, scales, stringr, ggdark,
viridisLite, crayon, grDevices, Surrogate, purrr, janitor,
rlang, modelr, plyr, tibble, spatstat.geom, spatstat.core,
RColorBrewer, stats
magrittr, dplyr, tidyr, ggplot2, scales, stringr, grDevices,
purrr, rlang, plyr, spatstat.geom, spatstat.core, RColorBrewer,
stats, rlist, furrr, ggpubr, viridis, future, tidyselect,
crayon
magrittr, dplyr, tidyr, ggplot2, scales, grDevices, purrr,
rlang, plyr, spatstat.geom, spatstat.core, RColorBrewer, stats,
rlist, furrr, future, tidyselect, crayon, pheatmap, ggpubr,
viridis
magrittr, dplyr, tidyr, ggplot2, scales, grDevices, purrr,
rlang, plyr, spatstat.geom, spatstat.core, RColorBrewer, stats,
furrr, future, tidyselect, crayon, pheatmap, viridis, gridExtra
magrittr, dplyr, tidyr, ggplot2, scales, grDevices, purrr,
rlang, plyr, spatstat.geom, spatstat.explore, RColorBrewer,
furrr, gridExtra, future, tidyselect, crayon, pheatmap
methods, graphics, stats, utils, rstan, sp, SDraw, fields
methods, graphics, stats, utils, rstan, sp, fields
methods, graphics, stats, utils, rstan, sp, fields, rgeos,
spam, deldir
methods, graphics, stats, utils, rstan, sp, geoR, SDraw,
fields
spdep, expm, coda, methods, MASS, boot, splines, LearnBayes,
nlme, gmodels
spdep, expm, coda, methods, MASS, boot, splines, LearnBayes,
nlme
classInt, dplyr, ggplot2, Rcpp, RcppProgress, sf, tmap,
viridis
classInt, dplyr, ggplot2, Rcpp, RcppProgress, sf, shiny, tmap,
viridis
automap, classInt, dplyr, ggplot2, gstat, methods, mgcv, Rcpp,
RcppProgress, sf, sp, tmap, viridis
automap, classInt, dplyr, fs, ggplot2, gstat, lubridate,
methods, mgcv, Rcpp, RcppProgress, sf, sp, tmap, viridis, vroom
automap, classInt, data.table, dplyr, fs, GenSA, geohashTools,
ggplot2, gstat, lubridate, mapview, methods, mgcv,
RColorBrewer, Rcpp, RcppProgress, sf, tmap, units, viridis,
vroom
classInt, colourvalues, data.table, dplyr, fs, GenSA,
geohashTools, ggplot2, leafem, leafgl, leaflet, lubridate,
methods, Rcpp, RcppProgress, sf, tmap, units, viridis
dplyr (>= 1.0.0), purrr, rlang, rsample (>= 0.0.9), tibble,
tidyselect, vctrs (>= 0.3.6)
dplyr (>= 1.0.0), ggplot2, glue, purrr, rlang (>= 1.0.0),
rsample (>= 0.0.9), sf, tibble, tidyselect, units, vctrs (>=
0.3.6)
moments, Rcpp, ggplot2 (>= 1.0.0), plyr, VGAM, reshape2,
tidyr, stats, utils, poweRlaw, parallel
Rcpp, ggplot2 (>= 1.0.0), plyr, VGAM, reshape2, tidyr, stats,
utils, parallel
Rcpp, ggplot2, plyr, tidyr, stats, utils, future.apply, gsl
Rcpp, ggplot2, plyr, stats, utils, future.apply, gsl,
segmented
data.table (>= 1.10.5), sp, rgeos, adehabitatHR, igraph,
methods
mgcv, deldir (>= 0.0-21), abind, tensor, polyclip (>= 1.2-0)
mgcv, deldir (>= 0.0-21), abind, tensor, polyclip (>= 1.3-0)
mgcv, deldir (>= 0.0-21), abind, tensor, polyclip (>= 1.3-0),
goftest
mgcv, Matrix, deldir (>= 0.0-21), abind, tensor, polyclip (>=
1.3-0), goftest
mgcv, Matrix, deldir (>= 0.0-21), abind, tensor, polyclip (>=
1.5-0), goftest
spatstat.utils (>= 1.3-1), mgcv, Matrix, deldir (>= 0.0-21),
abind, tensor, polyclip (>= 1.5-0), goftest
spatstat.utils (>= 1.6-0), mgcv, Matrix, deldir (>= 0.0-21),
abind, tensor, polyclip (>= 1.5-0), goftest
spatstat.utils (>= 1.7-0), mgcv, Matrix, deldir (>= 0.0-21),
abind, tensor, polyclip (>= 1.5-0), goftest
spatstat.utils (>= 1.7-1), mgcv, Matrix, deldir (>= 0.0-21),
abind, tensor, polyclip (>= 1.5-0), goftest
spatstat.utils (>= 1.8-0), mgcv, Matrix, deldir (>= 0.0-21),
abind, tensor, polyclip (>= 1.5-0), goftest
spatstat.utils (>= 1.9-0), mgcv, Matrix, deldir (>= 0.0-21),
abind, tensor, polyclip (>= 1.5-0), goftest
spatstat.utils (>= 1.13-0), mgcv, Matrix, deldir (>= 0.0-21),
abind, tensor, polyclip (>= 1.5-0), goftest
spatstat.utils (>= 1.13-0), mgcv, Matrix, deldir (>= 0.0-21),
abind, tensor, polyclip (>= 1.10-0), goftest
spatstat.utils (>= 1.15-0), mgcv, Matrix, deldir (>= 0.0-21),
abind, tensor, polyclip (>= 1.10-0), goftest (>= 1.2-2)
spatstat.utils (>= 1.17-0), mgcv, Matrix, deldir (>= 0.0-21),
abind, tensor, polyclip (>= 1.10-0), goftest (>= 1.2-2)
spatstat.utils (>= 1.18-0), spatstat.sparse, mgcv, Matrix,
abind, tensor, goftest (>= 1.2-2)
spatstat.utils (>= 2.1-0), spatstat.sparse (>= 2.0-0), mgcv,
Matrix, abind, tensor, goftest (>= 1.2-2)
spatstat.utils (>= 2.2-0), spatstat.sparse (>= 2.0-0), mgcv,
Matrix, abind, tensor, goftest (>= 1.2-2)
spatstat.utils (>= 2.3-0), spatstat.sparse (>= 2.0-0), mgcv,
Matrix, abind, tensor, goftest (>= 1.2-2)
spatstat.utils (>= 2.3-1), spatstat.sparse (>= 2.0-0), mgcv,
Matrix, abind, tensor, goftest (>= 1.2-2)
spatstat.utils (>= 3.0), spatstat.sparse (>= 3.0), goftest (>=
1.2-2), Matrix, abind
spatstat.utils (>= 1.18-0), spatstat.sparse, deldir (>=
0.0-21), polyclip (>= 1.10-0)
spatstat.utils (>= 2.2-0), Matrix, spatstat.sparse (>= 2.0)
spatstat.utils (>= 3.0), Matrix, spatstat.sparse (>= 3.0)
spatstat.utils (>= 3.0), spatstat.sparse (>= 3.0), mgcv,
Matrix, abind, tensor, goftest (>= 1.2-2)
spatstat.utils (>= 2.2-0), spatstat.sparse (>= 2.0-0)
iterators, RandomFields, fields, rgl, Matrix, FNN
survival, sp, spatstat, raster, iterators, RandomFields,
fields, rgl, Matrix, stringr, rgeos, RColorBrewer, geostatsp,
OpenStreetMap, methods
survival, sp, spatstat, raster, iterators, RandomFields,
fields, rgl, Matrix, stringr, rgeos, RColorBrewer, geostatsp,
OpenStreetMap, methods, lubridate
iterators, RandomFields, fields, rgl, Matrix
iterators, RandomFields, fields, rgl, Matrix, stringr
survival, sp, spatstat, raster, iterators, RandomFields,
fields, rgl, Matrix, stringr, rgeos, RColorBrewer, geostatsp
survival, sp, spatstat, raster, iterators, RandomFields,
fields, Matrix, stringr, rgeos, RColorBrewer, geostatsp,
methods, lubridate
survival, sp, spatstat, raster, iterators, RandomFields,
fields, Matrix, stringr, rgeos, RColorBrewer, methods,
lubridate
survival, sp, spatstat.geom, spatstat.core, spatstat (>=
2.0-0), raster, iterators, RandomFields, fields, Matrix,
stringr, rgeos, RColorBrewer, methods, lubridate
survival, sp, spatstat.core, spatstat.geom, spatstat.random,
spatstat (>= 2.0-0), raster, iterators, RandomFields, fields,
Matrix, stringr, rgeos, RColorBrewer, methods, lubridate
survival, sp, spatstat.explore, spatstat.geom,
spatstat.random, raster, iterators, fields, Matrix, stringr,
rgeos, RColorBrewer, methods, lubridate
survival, sp, spatstat.core, spatstat.geom, spatstat.random,
spatstat (>= 2.0-0), raster, iterators, fields, Matrix,
stringr, rgeos, RColorBrewer, methods, lubridate
LearnBayes, deldir, boot, splines, coda, nlme, MASS
LearnBayes, deldir, boot (>= 1.3-1), splines, coda, nlme, MASS
LearnBayes, deldir, boot (>= 1.3-1), parallel, splines, coda,
nlme, MASS
LearnBayes, deldir, boot (>= 1.3-1), splines, coda, nlme,
MASS, stats, graphics, grDevices, utils
LearnBayes, deldir, boot (>= 1.3-1), splines, coda, nlme,
MASS, stats, gmodels, expm, graphics, grDevices, utils
LearnBayes, deldir, boot (>= 1.3-1), splines, coda, nlme,
MASS, stats, gmodels, graphics, grDevices, utils
deldir, boot (>= 1.3-1), graphics, grDevices, utils, stats,
Matrix, LearnBayes, MASS, coda, expm, gmodels, nlme, units, s2,
e1071
deldir, boot (>= 1.3-1), graphics, grDevices, utils, stats,
Matrix, LearnBayes, MASS, coda, expm, gmodels, nlme
stats, deldir, boot (>= 1.3-1), graphics, utils, grDevices,
units, s2, e1071
lazyeval, methods, rlang, spbabel, tibble, utils
corpcor, graphics, plyr, MASS, separationplot, stats, Rcpp (>=
0.11.0), xtable
corpcor, graphics, plyr, MASS, stats, Rcpp (>= 0.11.0),
separationplot, xtable
corpcor, graphics, forecast, plyr, MASS, stats, Rcpp (>=
0.11.0), separationplot, xtable
ggplot2, lifecycle, readr, stringr, tibble
MassSpecWavelet, mQTL, parallel, doSNOW, data.table, foreach,
stats, cluster, utils, graphics, grDevices, ggplot2, gridExtra,
reshape2
MassSpecWavelet, mQTL, parallel, doSNOW, data.table, foreach,
stats, cluster, utils, graphics, grDevices, ggplot2, gridExtra,
reshape2, rvest, xml2, missForest, impute
MassSpecWavelet, cluster, mQTL, parallel, doSNOW, data.table,
foreach, stats, Rfast, utils, graphics, grDevices, ggplot2,
gridExtra, reshape2, rvest, xml2, missForest, impute
MassSpecWavelet, cluster, parallel, doSNOW, data.table,
foreach, stats, Rfast, utils, graphics, grDevices, ggplot2,
gridExtra, reshape2, rvest, xml2, missForest, impute
MassSpecWavelet, mQTL, parallel, doSNOW, data.table, foreach,
stats, cluster, utils, graphics, grDevices
stats, methods, utils, grDevices, graphics, maptools, sp,
raster
stats, methods, utils, grDevices, graphics, sp, raster
compare, hyperSpec, ChemoSpec, baseline, rgl, Metrics, GGally,
ggplot2, ellipse, ggdendro, caret, pls, pcaPP, RColorBrewer,
grid, methods, qdap, MASS, scatterplot3d, xcms, MAIT,
genefilter, impute
compare, hyperSpec, readJDX, baseline, rgl, Metrics, GGally,
ggplot2, ellipse, ggdendro, caret, pls, pcaPP, RColorBrewer,
grid, methods, qdap, MASS, scatterplot3d, xcms, MAIT,
genefilter, impute, igraph, KEGGgraph, KEGGREST, reticulate,
gdata, speaq, devtools
hyperSpec, caret, ggplot2, impute, ellipse, GGally, pcaPP,
compare, baseline, MASS, pls, readJDX, speaq, gdata,
genefilter, RColorBrewer, grDevices, graphics, methods, stats,
utils, Metrics
hyperSpec, caret, e1071, ggplot2, impute, ellipse, GGally,
pcaPP, compare, baseline, MASS, pls, readJDX, speaq, gdata,
genefilter, RColorBrewer, grDevices, graphics, methods, stats,
utils, Metrics
hyperSpec, caret, e1071, ggplot2, impute, ellipse, GGally,
pcaPP, compare, baseline, MASS, pls, readJDX, speaq,
genefilter, RColorBrewer, grDevices, graphics, methods, stats,
utils, Metrics
caret, e1071, ggplot2, impute, ellipse, GGally, pcaPP,
compare, baseline, MASS, pls, readJDX, speaq, genefilter,
RColorBrewer, grDevices, graphics, methods, stats, utils,
Metrics, imputeTS, specmine.datasets
caret, e1071, ggplot2, impute, ellipse, GGally, pcaPP,
compare, baseline, MASS, pls, readJDX, speaq, genefilter,
RColorBrewer, grDevices, graphics, methods, stats, utils,
Metrics, imputeTS, specmine.datasets, mrbin, plotly, narray
broom, cowplot, dplyr, ggplot2, ggraph, glue, igraph, lme4,
magrittr, purrr, rlang, tibble, tidyr
ggplot2, methods, plyr, reshape2, stringr, baseline, signal,
epiR
Rssa, raster, nnet, abind, RNetCDF, ncdf.tools, foreach,
JBTools, parallel, DistributionUtils, RColorBrewer
Rssa (>= 0.11), raster, nnet, abind, RNetCDF, ncdf.tools,
foreach, JBTools, parallel, DistributionUtils, RColorBrewer
Rssa (>= 0.11), raster, nnet, abind, RNetCDF, ncdf.tools,
foreach, JBTools, DistributionUtils, RColorBrewer
baseline, BiocGenerics, data.table, ggplot2, jsonlite,
magrittr, methods, nnls, NMF, plotly, plyr, RColorBrewer,
signal, stats, viridis, hNMF
Rcpp, osqp, MASS, Matrix, progress, rlist
Rcpp (>= 0.11.0), MASS, Matrix, progress, rlist
prospectr, grDevices, parallel, RColorBrewer, shiny, shinyjs
grDevices, parallel, RColorBrewer, shiny, shinyjs
grDevices, parallel, RColorBrewer (>= 1.0), shiny (>= 1.5.0),
shinyjs (>= 1.1)
prospectr (>= 0.1.3), grDevices, parallel, RColorBrewer (>=
1.1-2), shiny (>= 1.0.3), shinyjs (>= 0.9.1), devtools
prospectr, grDevices, parallel, RColorBrewer, shiny, shinyjs,
devtools, usethis
dplyr, lubridate, magrittr, purrr, tabulizer, stringr, tibble,
tm, tidyr, pdftools
dplyr, lubridate, magrittr, purrr, tabulizer, stringr, tibble,
tm, tidyr, pdftools, rvest
dplyr, lubridate, magrittr, purrr, stringr, tibble, tm, tidyr,
pdftools, rvest
abjutils, dplyr, httr, janitor, lubridate, magrittr, purrr,
stringr, tidyr, xml2, rvest, rlang, tibble, glue
abjutils, dplyr, httr, janitor, lubridate, magrittr, purrr,
stringr, tidyr, xml2, rvest, rlang, tibble, glue, httptest
methods, survival, nleqslv, ggplot2, plyr, splines
methods, survival, nleqslv, ggplot2, plyr, splines, BB, sm,
SQUAREM
BB, SQUAREM, ggplot2, methods, sm, survival, plyr, nleqslv
commonmark, xml2, hunspell (>= 2.9), knitr
commonmark, xml2, hunspell (>= 3.0), knitr
sp, rgdal, SDMTools, foreach, methods, grDevices, graphics,
stats, utils
sp, rgdal, foreach, methods, grDevices, graphics, stats, utils
pbapply, foreach, doParallel, ROCR, parallel, graphics, stats,
rpart
pbapply, pbmcapply, foreach, magrittr, future, doFuture, ROCR,
parallel, graphics, stats, rpart, purrr, stringr, gdata
pbapply, pbmcapply, magrittr, future, doFuture, foreach, ROCR,
parallel, graphics, stats, rpart, purrr, stringr, gdata,
pbapply, pbmcapply, magrittr, future.apply, future, doFuture,
foreach, ROCR, parallel, graphics, stats, rpart, purrr,
stringr, gdata, glue
future, future.apply, graphics, ROCR, stats, stringr
dplyr, future, future.apply, graphics, ROCR, stats, stringr
methods, quadmesh, raster, sp, stats, proj4
methods, quadmesh, raster, reproj (>= 0.4.0), sp, stats
methods, quadmesh, raster, reproj, sp, stats, crsmeta
coda, Matrix, methods, RSpectra, Rdpack, utils
nlme, spdep (>= 0.5-67), Matrix, sp, methods
nlme, spatialreg, spdep, Matrix, sp, methods, stats, utils,
mvtnorm, stringr, coda, spData, sf
gsheet, dplyr ,reshape2, ggplot2, ggsci, readr, lubridate
graphics, httr, jsonlite, rgbif, rworldmap, stats, utils
MASS, MCMCpack, coda, mvtnorm, splines, cluster
akima, MASS, MCMCpack, coda, mvtnorm, splines, cluster
akima, coda, cluster, ggplot2 (>= 2.0.0), gridExtra (>=
2.0.0), MASS, MCMCpack, mvtnorm, R2WinBUGS, reshape, scales,
splines, parallel
coda, cluster, ggplot2 (>= 2.0.0), gridExtra (>= 2.0.0),
interp, MASS, MCMCpack, mvtnorm, R2WinBUGS, reshape, scales,
splines, parallel
akima, gridExtra, MASS, MCMCpack, coda, mvtnorm, splines,
cluster
akima, coda, cluster, grid, gridExtra, MASS, MCMCpack,
mvtnorm, R2WinBUGS, reshape, scales, splines, parallel
akima, coda, cluster, grid, gridExtra (>= 2.0.0), MASS,
MCMCpack, mvtnorm, R2WinBUGS, reshape, scales, splines,
parallel
gee, geepack, MASS, splancs, lattice, waveslim, rje, stringr,
sp
gee, geepack, MASS, splancs, lattice, waveslim, rje, stringr,
sp, ggplot2, RColorBrewer
gee, geepack, MASS, splancs, lattice, waveslim, rje, stringr,
ggplot2, RColorBrewer
tourr, ggplot2, tibble, stats, dplyr, tidyr, tictoc, magrittr
dplyr, GGally, ggplot2, plotly, tibble, webshot
tourr, ggplot2, gganimate, plotly, shiny
tourr, ggplot2, gganimate, plotly, shiny, RColorBrewer, MASS,
dplyr, magrittr,
tourr, ggplot2, gganimate, plotly, shiny, RColorBrewer, dplyr,
ggplot2, gganimate, plotly, shiny, Rdimtools
ggplot2, gganimate, plotly, shiny, Rdimtools, transformr,
magrittr
GlobalOptions (>= 0.1.1), GetoptLong (>= 0.1.8), circlize,
stats, methods, grDevices, ComplexHeatmap, lubridate, utils
GlobalOptions (>= 0.1.1), GetoptLong (>= 0.1.8), circlize,
stats, methods, grDevices, lubridate, utils
ggplot2, xml2, readxl, knitr, cowplot, digest, signal
xml2, curl, httr, clipr, purrr, stats, utils, docker, magick,
scales, formatR, openssl, stringi, jsonlite, HARtools,
lubridate
xml2, curl, httr, purrr, stats, utils, docker, magick, scales,
formatR, openssl, stringi, jsonlite, HARtools, lubridate
xml2, curl, httr, dplyr, purrr, stats, utils, stevedore,
magick, scales, formatR, openssl, stringi, HARtools, jsonlite,
lubridate
Formula, Matrix, maxLik, stats, sphet, memisc, car, methods,
numDeriv, MASS
Formula, Matrix, maxLik, stats, sphet, memisc, car, methods,
numDeriv, MASS, spatialreg
multicool, glmnet, parallel, doParallel, foreach, mvnfast,
caret
multicool, glmnet, parallel, doParallel, foreach, caret
multicool, glmnet, parallel, doParallel, foreach
tidyr, dplyr, stats, Rcpp, robustbase, ggplot2, plyr, grid,
patchwork
tidyr, dplyr, stats, Rcpp, robustbase, ggplot2, plyr, grid,
patchwork, psych, lme4, methods
plm, maxLik, MASS, bdsmatrix, ibdreg, nlme, Matrix, spam
plm, maxLik, MASS, bdsmatrix, ibdreg, nlme, Matrix, spam,
methods
plm, maxLik, MASS, bdsmatrix, ibdreg, nlme, Matrix, spam,
methods, spatialreg (>= 1.2-1), spdep (>= 1.2-1)
Rcpp (>= 1.0.1), emulator, miscTools, penalized, ggplot2,
gridExtra, plot3D, MASS
gstat, sp, randomForest, psy, gbm, stats
gstat, sp, randomForest, psy, gbm, biomod2, stats, ranger
R.utils, utils, matlabr, stringr, oro.nifti, fslr, git2r
R.utils, neurobase, utils, matlabr, oro.nifti, git2r
R.utils, neurobase, utils, matlabr (>= 1.5.0), oro.nifti,
git2r
R.utils, neurobase, utils, matlabr (>= 1.5.2), oro.nifti,
git2r
spm, gstat, sp, randomForest, psy, gbm, stats, ranger, MASS,
nlme, glmnet, e1071
spm, gstat, sp, randomForest, psy, gbm, stats, ranger, MASS,
fields, nlme, glmnet, e1071
graphics, generics, Matrix, sf, stats, tibble, parallel
fields, vegan, Matrix, doParallel, foreach, ggplot2,
fields, vegan, Matrix, doParallel, foreach, ggplot2, spdep,
rARPACK, methods
sp, fields, vegan, Matrix, doParallel, foreach, ggplot2,
spdep, rARPACK, RColorBrewer, splines, methods
sp, fields, vegan, Matrix, doParallel, foreach, ggplot2,
spdep, rARPACK, RColorBrewer, splines, FNN, methods
dplyr, magrittr, rmarkdown, sf, spdep, tidyr, tmap
dplyr, magrittr, sf, spdep, tidyr, rlang, rmarkdown, tmap
dplyr, magrittr, sf, spdep, tidyr, rlang
rinat, rbison, rgbif, ecoengine, rebird, plyr, maps, AntWeb,
ggmap, maptools, sp, rgeos, lubridate, RColorBrewer, httr, XML,
rgdal, RJSONIO, leafletR (>= 0.1-1), data.table, assertthat
rinat (>= 0.1.1), rbison (>= 0.3.2), rgbif (>= 0.6.2),
ecoengine (>= 1.3), rebird (>= 0.1.1), AntWeb (>= 0.6.1), plyr,
ggmap, maptools, rworldmap, sp, rgeos, lubridate, RColorBrewer,
httr, XML, rgdal, RJSONIO, leafletR (>= 0.2-0), data.table,
assertthat
rinat (>= 0.1.4), rbison (>= 0.3.2), rgbif (>= 0.7.0),
ecoengine (>= 1.4), rebird (>= 0.1.1), AntWeb (>= 0.6.1), plyr,
ggmap, maptools, rworldmap, sp, rgeos, lubridate, RColorBrewer,
httr, XML, rgdal, RJSONIO, leafletR (>= 0.2-0), data.table,
assertthat, whisker
rgbif, rinat (>= 0.1.4), rbison (>= 0.3.2), ecoengine (>=
1.4), rebird (>= 0.1.1), AntWeb (>= 0.6.1), plyr, ggmap,
maptools, rworldmap, sp, rgeos, lubridate, RColorBrewer, httr,
XML, rgdal, RJSONIO, leafletR (>= 0.2-0), data.table,
assertthat, whisker
rgbif (>= 0.7.7), rinat (>= 0.1.4), rbison (>= 0.3.2),
ecoengine (>= 1.4), rebird (>= 0.1.1), AntWeb (>= 0.6.1),
ggmap, maptools, rworldmap, sp, rgeos, lubridate, RColorBrewer,
httr, rgdal, leafletR (>= 0.2-0), whisker, gistr
utils, methods, stats, rgbif (>= 0.8.4), rbison (>= 0.4.8),
ecoengine (>= 1.9.1), rebird (>= 0.1.1), AntWeb (>= 0.7),
rvertnet (>= 0.3.0), lubridate, httr, whisker, V8, jsonlite
utils, methods, stats, rgbif (>= 0.8.4), rbison (>= 0.4.8),
ecoengine (>= 1.9.1), rebird (>= 0.1.1), AntWeb (>= 0.7),
rvertnet (>= 0.3.0), ridigbio (>= 0.3), lubridate, httr,
whisker, V8, jsonlite
utils, rgbif, rbison, rebird, rvertnet, ridigbio, lubridate,
crul, whisker, jsonlite, data.table, tibble, wellknown
methods, utils, stats, graphics, spocc (>= 0.3.0), ggmap,
grid, sp, rworldmap, RColorBrewer, httr, leafletR (>= 0.2-0),
gistr
shinyBS, shiny, shinydashboard, SPOT (>= 2.0.3), gridExtra,
shinyjs, rhandsontable, XML, rclipboard, plotly, tools, httpuv,
methods
smoof, shiny, shinydashboard, SPOT (>= 2.0.3), gridExtra,
shinyjs, rhandsontable, XML, rclipboard, plotly, tools, httpuv,
methods
smoof, shiny, shinydashboard, SPOT (>= 2.0.3), gridExtra,
shinyjs, rhandsontable, XML, rclipboard, plotly, tools, httpuv,
methods, shinyFiles, batchtools
dplyr, purrr, tidyr, httr, lubridate, jsonlite, readr, rvest,
stringr, tibble
dplyr, purrr, tidyr, httr, lubridate, jsonlite, readr, rvest,
stringr, tibble, genius
dplyr, purrr, tidyr, httr, lubridate, jsonlite, readr, rvest,
stringr, tibble, janitor, rlang, ggridges, magrittr, genius,
assertthat, xml2
Matrix, RSpectra, tools, utils, methods, stats
Rsamtools, caTools, parallel, graphics, stats
Rcpp, spatstat, rgl, fields, mvtnorm, ggplot2 (>= 2.1.0),
matrixcalc,sp
Rcpp, spatstat, rgl, fields, mvtnorm, ggplot2 (>= 2.1.0)
Rcpp (>= 0.12.3),partitions,magic,mathjaxr,disordR (>= 0.0-8)
Rcpp (>= 0.9.4), RcppProgress (>= 0.1), data.table, fhidata,
stringr, readxl, zoo
Matrix, assertthat, igraph, extrafont, ggplot2
cvTools, reshape2, pcaPP, robustbase, grDevices, graphics,
stats, grid
cvTools, graphics, grDevices, grid, pcaPP, reshape2,
robustbase, stats
cvTools, reshape2, pcaPP, robustbase, grDevices, graphics,
stats
Rcpp, mvtnorm, BayesLogit, truncnorm, stats, igraph, MCMCpack,
patchwork, tidyr, dplyr, ggplot2, tidyselect, Seurat, rlang
assertthat, stringr, glue (>= 1.4.0), magrittr, bsplus,
shinyFiles, shinyWidgets, shinydashboardPlus, shinytoastr,
shinyAce, htmltools, shinydashboard, shinyjqui, vroom, dplyr,
utils
assertthat, stringr, glue (>= 1.4.0), magrittr, bsplus,
shinyFiles, shinyWidgets, shinytoastr, shinyAce, htmltools,
vroom, dplyr, utils
assertthat, stringr, glue (>= 1.4.0), magrittr, bsplus,
shinyFiles, shinyWidgets, shinytoastr, shinyAce, htmltools,
vroom, dplyr, utils, R6, crayon
assertthat, stringr, glue (>= 1.4.0), magrittr, shinytoastr,
shinyAce, htmltools, utils, R6, crayon
httr, assertthat, stringr, glue, magrittr, crayon
httr, assertthat, stringr, glue, magrittr, crayon, utils
httr, assertthat, stringr, glue, magrittr, crayon, utils, R6
httr, assertthat, stringr, glue, magrittr, crayon, utils, R6,
stats
pedometrics, Rcpp (>= 0.11.3), sp, SpatialTools
gstat, pedometrics, Rcpp (>= 0.11.3), sp, SpatialTools
methods, pedometrics, Rcpp (>= 0.11.3), sp, SpatialTools
methods, pedometrics, Rcpp, sp, SpatialTools
methods, deldir, foreign, graphics, grDevices, MASS, rgeos,
stats
methods, deldir, foreign, graphics, grDevices, Hmisc, MASS,
rgeos, stats
crossdes, deldir, foreign, graphics, grDevices, Hmisc, MASS,
methods, rgeos, stats
crossdes, deldir, foreign, graphics, grDevices, Hmisc, MASS,
parallel, rgeos, stats
crossdes, deldir, foreign, graphics, grDevices, Hmisc, MASS,
parallel, rgeos, stats, sf, sp
boot, crossdes, deldir, graphics, grDevices, lme4, MASS,
stats, units
boot, crossdes, deldir, graphics, grDevices, lme4, MASS,
sampling, stats, units
Rcpp (>= 0.12.12), methods, rgdal, raster,deldir,
SpatioTemporal,plyr,sp,limSolve,
R2BayesX,BayesX,BayesXsrc,ncdf4, bcv, rgeos, splines, parallel,
foreach,doParallel,automap
matrixcalc, mvtnorm, ggplot2, stats, viridis, graphics,
tibble, sp
graphics, gstat, magrittr, methods, mvtnorm, purrr, raster,
whisker
graphics, gstat, magrittr, methods, mvtnorm, purrr, raster,
sp, whisker
cli, dtw, fdacluster, funData, furrr, ggplot2, ggrepel, MFPCA,
pbapply, purrr, Rcpp, roahd, scales, tibble, tidyr
glmnet, stats, Matrix, multiridge (>= 1.5), mvtnorm
gamlss, gamlss.dist, TeachingSampling, methods, dplyr, caret
gamlss, gamlss.dist, TeachingSampling, methods, dplyr, caret,
magrittr
dplyr, lazyeval, magrittr, survey, tibble
dplyr (>= 0.5), lazyeval, magrittr, survey, tibble
dplyr (>= 0.7), magrittr, rlang, survey, tibble
dplyr (>= 0.7), magrittr, rlang, survey, tibble, tidyselect
dplyr (>= 0.7), magrittr, methods, rlang, survey, tibble,
tidyselect
dplyr (>= 0.7), magrittr, rlang, survey, tibble, tidyr,
tidyselect
dplyr (>= 1.0), magrittr, methods, rlang, survey (>= 4.1),
tibble, tidyr, tidyselect, vctrs (>= 0.3.0)
foreach, plyr, r4ss, gtools, lubridate, ggplot2, bbmle, dplyr,
magrittr, grDevices, graphics, stats, utils
foreach, r4ss (>= 1.35.0), gtools, ggplot2, bbmle, grDevices,
graphics, stats, utils
rstan (>= 2.18.2), rstantools (>= 1.5.1), CircStats, dtw,
ggplot2, cowplot
actuar, checkr, dplyr, FAdist, grid, magrittr, plyr, pryr,
purrr, tibble, scales
checkr, fitdistrplus, FAdist, ggplot2, graphics, grid, scales,
stats, VGAM
chk, fitdistrplus, actuar, abind, ggplot2, graphics, grid,
lifecycle, scales, stats, VGAM
chk, fitdistrplus, actuar, abind, ggplot2, graphics, grid,
lifecycle, tibble, scales, stats, VGAM
chk, fitdistrplus, abind, actuar, ggplot2, graphics, grid,
lifecycle, tibble, scales, stats, VGAM, Rcpp
chk, fitdistrplus, abind, actuar, ggplot2, graphics, grid,
lifecycle, tibble, utils, scales, stats, VGAM, Rcpp
abind, chk (>= 0.7.0), doFuture, foreach, furrr, generics,
ggplot2, goftest, graphics, grid, lifecycle, parallel, plyr,
purrr, Rcpp, scales, ssddata, stats, stringr, tibble, TMB (>=
1.7.20), universals, utils, VGAM
methods, grid, lattice, graphics, stats, parallel
tidyr, dplyr, stringr, airportr, magrittr
MASS, Biobase, edgeR, limma, qvalue, ssize.fdr
MASS, Biobase, edgeR, limma, qvalue, ssize.fdr, graphics,
stats
stats, methods, units, checkmate, cli, tibble, magrittr,
tidyr, dplyr, purrr, stringr, rlang
changepoint, e1071, ggplot2, stats, VGAM
data.table (>= 1.10.4-3), stats, utils, tools, readxl (>=
1.0.0), openxlsx (>= 4.0.17), MASS, shiny (>= 1.0.5),
shinydashboard (>= 0.6.1)
stats, sandwich, grDevices, graphics, methods, utils
stats, grDevices, sandwich, graphics, methods, utils
compiler, Matrix, SparseM, quantreg, MatrixModels, forecast,
foreach, stats, methods
compiler, Matrix, SparseM, quantreg, forecast, foreach, stats,
methods, graphics, grDevices, rgl
compiler, Matrix, SparseM, quantreg, forecast, foreach, stats,
methods, graphics, grDevices
parallel, doParallel, foreach, lattice, msm, ggplot2, moments,
hydroGOF, zoo, data.table, xts, EmiStatR
dplyr, bigstep, rsample, tibble, purrr, tidyr, stringr,
ggplot2, broom, caret, glmnet, ncvreg
glmnet, dplyr, bigstep, rsample, tibble, purrr, tidyr,
stringr, ggplot2, broom, caret, ncvreg, knitr
glmnet, dplyr, bigstep, rsample, tibble, purrr, tidyr,
stringr, ggplot2, broom, caret, ncvreg, knitr, Hmisc, expss,
lme4, matrixStats, recipes, lmerTest
dplyr, lme4, magrittr, matrixStats, reshape2, stats
dplyr, ggplot2, ggfortify, lme4, magrittr, matrixStats,
reshape2, rlang, scales, stats, tibble, tidyr
graphics, methods, MASS, e1071, partykit
graphics, methods, MASS, e1071, partykit, party, randomForest,
ranger
ggm, matrixcalc, sem, nsga2R, graph, Rgraphviz, methods
ggm, matrixcalc, sem, nsga2R, graph, Rgraphviz, methods,
polycor
ggm, matrixcalc, sem, nsga2R, graph, Rgraphviz, methods,
polycor, foreach
BBmisc (>= 1.11), checkmate (>= 1.8.5), Matrix (>= 1.2-14),
methods, stats, utils
checkmate (>= 1.8.5), Matrix (>= 1.2-14), methods, stats,
utils
tune (>= 0.1.2), dplyr (>= 1.0.0), rlang (>= 0.4.0), tibble
(>= 2.1.3), purrr (>= 0.3.2), parsnip (>= 0.0.4), workflows (>=
0.1.0), recipes (>= 0.1.15), yardstick, tidyr, dials, digest,
glue, ggplot2, glmnet, rsample, cli, butcher, stats, foreach,
generics
tune (>= 0.1.2.9000), dplyr (>= 1.0.0), rlang (>= 0.4.0),
tibble (>= 2.1.3), purrr (>= 0.3.2), parsnip (>= 0.0.4),
workflows (>= 0.2.2), recipes (>= 0.1.15), rsample (>= 0.0.9),
workflowsets (>= 0.0.0.9001), butcher (>= 0.1.3), yardstick,
tidyr, dials, glue, ggplot2, glmnet, cli, stats, foreach,
generics
tune (>= 0.1.3), dplyr (>= 1.0.0), rlang (>= 0.4.0), tibble
(>= 2.1.3), purrr (>= 0.3.2), parsnip (>= 0.0.4), workflows (>=
0.2.2), recipes (>= 0.1.15), rsample (>= 0.1.1), workflowsets
(>= 0.1.0), butcher (>= 0.1.3), yardstick, tidyr, dials, glue,
ggplot2, glmnet, cli, stats, foreach, generics
tune (>= 0.1.3), dplyr (>= 1.0.0), rlang (>= 0.4.0), tibble
(>= 2.1.3), purrr (>= 0.3.2), parsnip (>= 0.0.4), workflows (>=
0.2.3), recipes (>= 0.1.15), rsample (>= 0.1.1), workflowsets
(>= 0.1.0), butcher (>= 0.1.3), yardstick, tidyr, glue,
ggplot2, glmnet, cli, stats, foreach
tune (>= 0.1.3), dplyr (>= 1.0.0), rlang (>= 0.4.0), tibble
(>= 2.1.3), purrr (>= 0.3.2), parsnip (>= 0.0.4), workflows (>=
0.2.3), recipes (>= 0.2.0), rsample (>= 0.1.1), workflowsets
(>= 0.1.0), butcher (>= 0.1.3), yardstick, tidyr, glue,
ggplot2, glmnet, cli, stats, foreach
magrittr, intervals, RColorBrewer, stringr, gWidgets,
gWidgetsRGtk2, RPostgreSQL, ggplot2, reshape2, sqldf, graphics,
utils, stats, lattice, grDevices, Hmisc, RGtk2, lubridate,
dplyr, xtable, mgcv
magrittr, intervals, RColorBrewer, stringr, gWidgets,
gWidgetsRGtk2, RPostgreSQL, ggplot2, reshape2, sqldf, graphics,
utils, stats, lattice, grDevices, Hmisc (>= 4.1-1), RGtk2,
lubridate, dplyr, xtable, mgcv
magrittr, intervals, RColorBrewer, stringr, gWidgets,
gWidgetsRGtk2, RPostgreSQL, ggplot2, reshape2, sqldf, graphics,
utils, stats, lattice, grDevices, Hmisc (>= 4.1-1), RGtk2,
lubridate, dplyr, xtable, mgcv, rlang
magrittr, intervals, RColorBrewer, stringr, RPostgres,
ggplot2, reshape2, graphics, utils, stats, lattice, grDevices,
Hmisc (>= 4.1-1), lubridate, dplyr, xtable, mgcv, rlang, pool,
withr, scales
magrittr, intervals, RColorBrewer, stringr, RPostgres,
ggplot2, reshape2, graphics, utils, stats, lattice, grDevices,
Hmisc (>= 4.1-1), lubridate, dplyr, xtable, mgcv, rlang, pool,
withr
dplyr, reshape2, purrr, Rcpp, magrittr, MASS, stats, tidyr,
coop
sp, rgeos, raster, rgdal, maptools, deldir, spdep, grDevices,
methods
stats, Matrix, parallel, RcppParallel (>= 5.1.1)
methods, stats4, inline, gridExtra (>= 2.0.0), Rcpp (>=
0.12.0), RcppParallel (>= 5.0.1), loo (>= 2.3.0), pkgbuild,
withr, V8, brew, coda
methods, stats4, inline, gridExtra (>= 2.0.0), Rcpp (>=
0.12.0), RcppParallel (>= 5.0.1), loo (>= 2.3.0), pkgbuild,
brew, coda, V8
tcltk, stringr, assertthat, glue, XML, rJava
Rcpp (>= 0.11.1), ggplot2, scales, graphics, stats
data.table, readr (>= 1.0.0), stringr, tidyr, purrr, ggplot2
(>= 2.1.0), iterpc, combinat, label.switching, proxy, MCL,
gridExtra, ggdendro, ggrepel, MCMCpack, parallel, methods,
stats
glmnet, survival, cornet, joinet, Matrix
bslib, dplyr, ggplot2, magrittr, shiny, shinyjs, shinyWidgets
methods, Rcpp, rlang, units, classInt (>= 0.2-2)
methods, parallel, classInt (>= 0.2-2), ncdf4, ncmeta, rlang,
units
methods, parallel, classInt (>= 0.2-2), rlang, units
methods, parallel, classInt (>= 0.4-1), lwgeom, rlang, units
R6, leaflet, plumber, png, rlang, sf, stars, units, assertthat
dplyr, readr, tibble, tidyr, tidyselect, snakecase, purrr,
rlang, stats, pander
dplyr, readr, tibble, tidyr, tidyselect, snakecase, purrr,
rlang, stats, pander, generics
abind, bigmemory, future, multiApply (>= 2.1.1), parallel,
easyNCDF, s2dverification, ClimProjDiags
abind, bigmemory, future, multiApply (>= 2.1.0), parallel,
easyNCDF, s2dv, ClimProjDiags, PCICt
abind, bigmemory, future, multiApply (>= 2.1.0), parallel,
easyNCDF, s2dv, ClimProjDiags, PCICt, methods
MASS, ks, zoo, data.table, methods, matrixcalc, vars, nloptr,
maxLik, rlist, stats4, highfrequency, fGarch, R.utils,
lubridate, xts, lessR, quantmod
MASS, ks, zoo, data.table, methods, matrixcalc, vars, maxLik,
rlist, fGarch, lubridate, xts, lessR, quantmod
MASS, ks, zoo, doSNOW, foreach, methods, matrixcalc,
optimParallel, parallel, vars, xts, lessR, quantmod
MASS, ks, zoo, data.table, dplyr, methods, matrixcalc, vars,
maxLik, rlist, fGarch, lubridate, xts, lessR, quantmod
MASS, ks, zoo, doSNOW, foreach, methods, matrixcalc,
optimParallel, parallel, vars, maxLik, xts, lessR, quantmod
methods, grDevices, stats, utils, magrittr, dplyr, ggplot2,
tibble, rlang, tidyr, patchwork, purrr, readr, stringr, yaml,
lpSolve, gtools, data.tree, RColorBrewer, zoo, car, arrow (>=
0.17.0)
methods, grDevices, stats, utils, magrittr, dplyr, ggplot2,
tibble, rlang, tidyr, patchwork, purrr, readr (>= 1.4.0),
stringr, yaml, lpSolve, gtools, data.tree, RColorBrewer, zoo,
car, flexmix, arrow (>= 3.0.0)
methods, grDevices, stats, utils, magrittr, dplyr, ggplot2,
tibble, rlang, tidyr, patchwork, purrr, readr (>= 1.4.0),
stringr, yaml, lpSolve, gtools, data.tree, RColorBrewer, zoo,
Rcpp, arrow (>= 3.0.0)
igraph, MASS, rARPACK, cluster, foreach, snow, doSNOW
igraph, MASS, rARPACK, cluster, foreach, parallel, doParallel
GGally, gplots, dplyr, reshape2, ggdendro, tibble, ggfortify,
ggrepel, gbm, forestplot, rpart.plot, grDevices, gridExtra,
pROC, factoextra, methods, pvca, limma, randomForest, glmnet,
knitr, rmarkdown
GGally, gplots, dplyr, reshape2, ggdendro, tibble, ggfortify,
ggrepel, gbm, forestplot, rpart.plot, grDevices, gridExtra,
pROC, factoextra, methods, pvca, limma, randomForest, glmnet,
knitr, rmarkdown, pheatmap, RColorBrewer, graphics, tidyverse,
magrittr
GGally, gplots, dplyr, reshape2, ggdendro, tibble, ggfortify,
ggrepel, gbm, forestplot, rpart.plot, grDevices, gridExtra,
pROC, factoextra, methods, pvca, limma, randomForest, glmnet,
knitr, rmarkdown, pheatmap, RColorBrewer, graphics, tidyverse,
magrittr, multigroup
GGally, dplyr, reshape2, ggdendro, tibble, ggfortify, ggrepel,
gbm, forestplot, rpart.plot, grDevices, gridExtra, pROC,
factoextra, methods, pvca, limma, randomForest, glmnet, knitr,
rmarkdown, pheatmap, RColorBrewer, graphics, tidyverse,
magrittr
data.table, dplyr (>= 0.3), ggplot2, grid, Hmisc, lazyeval,
lfe, lubridate, matrixStats, stringr, tidyr
data.table, dplyr (>= 0.3), ggplot2, grid, Hmisc, lazyeval,
lfe, lubridate, matrixStats, stargazer, stringr, tidyr
data.table, dplyr (>= 0.3), ggplot2, grid, Hmisc, lazyeval,
lubridate, matrixStats, stringr, tidyr
data.table, dplyr (>= 0.4.1), ggplot2, grid, Hmisc, lazyeval,
lfe, lubridate, matrixStats, stargazer, stringdist, stringr,
tidyr
data.table, dplyr (>= 0.4.1), ggplot2, lazyeval, matrixStats,
proto, stargazer, stringr, tidyr
data.table, dplyr (>= 0.4.3), ggplot2 (>= 2.0.0), lazyeval,
matrixStats, methods, stargazer, stringr, tidyr
data.table, dplyr (>= 0.4.3), ggplot2 (>= 2.0.0), lazyeval,
matrixStats, methods, stringr, tidyr
data.table, dplyr (>= 0.5.0), ggplot2 (>= 2.0.0), lazyeval,
matrixStats, methods, stringr, tidyr
data.table, dplyr (>= 0.6.0), ggplot2 (>= 2.0.0), lazyeval,
matrixStats, methods, rlang, stringr, tidyr
data.table, tidyselect, dplyr (>= 0.8.0), ggplot2 (>= 2.0.0),
lazyeval, matrixStats, methods, rlang, stringr, tidyr
data.table, tidyselect, dplyr (>= 1.0), ggplot2 (>= 2.0.0),
lazyeval, matrixStats, methods, rlang, stringr, tidyr
data.table, tidyselect, dplyr (>= 1.0), ggplot2 (>= 2.0.0),
lazyeval, matrixStats, methods, rlang, stringr
R6, cli, crayon, subprocess, rlang, jsonlite, knitr, utils,
attempt, tools, rstudioapi
ggplot2, grid, gridExtra, scales, RColorBrewer
data.table, ggplot2 (>= 3.0.0), sommer (>= 3.7.3), Rcpp
data.table, ggplot2 (>= 3.0.0), methods, sommer (>= 3.7.3),
Rcpp
emmeans, ggplot2 (>= 3.3.0), gridExtra, knitr, lme4, methods,
statgenSTA (>= 1.0.6), xtable
animation, factoextra, ggforce, ggplot2 (>= 3.3.0), grid,
gridExtra, locfit, lubridate, reshape2, scales, SpATS (>=
1.0-11), splines
animation, factoextra, ggforce, ggplot2 (>= 3.3.0),
ggnewscale, grid, gridExtra, locfit, lubridate, reshape2,
scales, SpATS (>= 1.0-13), splines
data.table, ggplot2, Matrix, stringi, Rcpp
data.table, ggplot2, gridExtra, LMMsolver, scales, statgenIBD
(>= 1.0.4)
data.table, foreach, ggplot2, gridExtra, LMMsolver, Matrix,
scales, spam, statgenIBD (>= 1.0.4), stringi
emmeans, ggplot2 (>= 3.0), ggrepel, gridExtra, knitr, lme4,
mapproj, maps, methods, qtl, reshape2, scales, SpATS (>=
1.0-10), xtable
emmeans, ggplot2 (>= 3.0), ggrepel, gridExtra, knitr, lme4,
mapproj, maps, qtl, scales, SpATS (>= 1.0-10), xtable
emmeans, ggplot2 (>= 3.3.0), ggrepel, gridExtra, knitr, lme4,
mapproj, maps, qtl, scales (>= 1.1.0), SpATS (>= 1.0-10),
xtable
statnet.common (>= 3.3), network (>= 1.13), networkDynamic (>=
0.9), ergm (>= 3.6)
ergm (>= 3.9.4), network (>= 1.13), networkDynamic (>= 0.9),
statnet.common (>= 4.1.4)
utils, methods, coda, parallel, tools, rle
asbio, car, clusterGeneration, knitr, MASS, MVN, nortest,
psych, pwr, rstatix, stats
jsonlite, rjstat, tidyverse, tibble, dplyr, tidyr, utils,
stringr, ggplot2
jsonlite, tibble, dplyr, tidyr, utils, stringr, ggplot2, httr,
readr, lubridate
BayesFactor, boot, broomExtra (>= 1.0.1), dplyr, ez, ipmisc
(>= 1.1.0), metaBMA, metafor, metaplus, psych, purrr,
rcompanion, rlang, sjstats, stats, tibble, tidyr, WRS2
boot, broomExtra (>= 3.0.0), correlation (>= 0.2.0), dplyr,
effectsize (>= 0.3.0), ez, ipmisc (>= 2.0.0), metafor,
metaplus, purrr, rcompanion, rlang, stats, tidyBF (>= 0.2.0),
tidyr, WRS2
broomExtra, correlation (>= 0.3.0), dplyr, effectsize, ez,
ipmisc (>= 3.0.1), metafor, metaplus, rcompanion, rlang, stats,
tidyBF, tidyr, WRS2 (>= 1.1-0)
broomExtra, correlation, dplyr, effectsize, ez, ipmisc,
metafor, metaplus, rcompanion, rlang, stats, tidyBF (>= 0.3.0),
tidyr, WRS2
broomExtra, correlation (>= 0.4.0), dplyr, effectsize, ez,
ipmisc (>= 4.0.0), metafor, metaplus, rcompanion, rlang, stats,
tidyBF, tidyr, WRS2
broomExtra, correlation, dplyr, effectsize (>= 0.4.0), ez,
insight (>= 0.10.0), ipmisc (>= 4.1.0), metafor, metaplus,
parameters (>= 0.9.0), performance (>= 0.5.1), rcompanion,
rlang, stats, tidyBF (>= 0.4.0), tidyr, WRS2
correlation, dplyr, effectsize, ez, insight (>= 0.11.0),
ipmisc, metafor, metaplus, parameters (>= 0.10.0), performance
(>= 0.6.0), rcompanion, rlang, stats, tidyBF, tidyr, WRS2
correlation, dplyr, effectsize (>= 0.4.1), ez, ipmisc,
metafor, metaplus, parameters (>= 0.10.0), performance (>=
0.6.0), rcompanion, rlang, stats, tidyBF (>= 0.4.2), tidyr,
WRS2
afex, BayesFactor, correlation, dplyr, effectsize (>= 0.4.3),
insight (>= 0.12.0), ipmisc, metaBMA, metafor, metaplus,
parameters (>= 0.11.0), performance, rlang, stats, tidyr, WRS2
afex, BayesFactor, correlation (>= 0.6.0), dplyr, effectsize
(>= 0.4.3), insight (>= 0.13.0), ipmisc (>= 6.0.0), parameters
(>= 0.11.0), performance, rlang, stats, tidyr, WRS2 (>= 1.1-1)
BayesFactor (>= 0.9.12-4.2), correlation (>= 0.6.0), dplyr,
effectsize (>= 0.4.3), insight (>= 0.13.0), ipmisc (>= 6.0.0),
parameters (>= 0.12.0), performance, rlang, stats, tidyr, WRS2
(>= 1.1-1)
BayesFactor (>= 0.9.12-4.2), correlation (>= 0.6.1), dplyr,
effectsize (>= 0.4.4-1), insight (>= 0.13.0), ipmisc,
parameters (>= 0.13.0), performance (>= 0.7.1), rlang, stats,
tidyr, WRS2
BayesFactor (>= 0.9.12-4.2), correlation (>= 0.6.1), dplyr,
effectsize (>= 0.4.5), insight (>= 0.14.1), ipmisc, parameters
(>= 0.14.0), performance (>= 0.7.2), purrr, rlang, stats,
tidyr, WRS2 (>= 1.1-1)
BayesFactor (>= 0.9.12-4.2), correlation (>= 0.7.0),
datawizard (>= 0.2.1), dplyr, effectsize (>= 0.5), insight (>=
0.14.5), magrittr, parameters (>= 0.15.0), performance (>=
0.8.0), rlang, stats, tibble, tidyr, WRS2 (>= 1.1-3), zeallot
BayesFactor (>= 0.9.12-4.3), correlation (>= 0.7.1),
datawizard (>= 0.2.2), dplyr, effectsize (>= 0.6.0), glue,
insight (>= 0.15.0), magrittr, parameters (>= 0.16.0),
performance (>= 0.8.0), rlang, stats, tibble, tidyr, WRS2 (>=
1.1-3), zeallot
BayesFactor (>= 0.9.12-4.3), correlation (>= 0.8.0),
datawizard (>= 0.3.0), dplyr, effectsize (>= 0.6.0.1), glue,
insight (>= 0.17.0), magrittr, parameters (>= 0.17.0),
performance (>= 0.8.0), rlang, stats, tibble, tidyr, WRS2 (>=
1.1-3), zeallot
BayesFactor (>= 0.9.12-4.3), correlation (>= 0.8.0),
datawizard (>= 0.4.1), dplyr, effectsize (>= 0.6.0.1), glue,
insight (>= 0.17.1), magrittr, parameters (>= 0.17.0),
performance (>= 0.8.0), rlang, stats, tibble, tidyr, WRS2 (>=
1.1-3), zeallot
BayesFactor (>= 0.9.12-4.4), correlation (>= 0.8.2),
datawizard (>= 0.5.0), dplyr, effectsize (>= 0.7.0.5), glue,
insight (>= 0.18.2), magrittr, parameters (>= 0.18.2),
performance (>= 0.9.2), rlang, stats, tibble, tidyr, WRS2 (>=
1.1-3), zeallot
BayesFactor (>= 0.9.12-4.4), correlation (>= 0.8.3),
datawizard (>= 0.6.2), dplyr, effectsize (>= 0.8.0), glue,
insight (>= 0.18.4), magrittr, parameters (>= 0.19.0),
performance (>= 0.10.0), rlang, stats, tibble, tidyr, WRS2 (>=
1.1-4), zeallot
BayesFactor (>= 0.9.12-4.4), correlation (>= 0.8.3),
datawizard (>= 0.6.3), dplyr, effectsize (>= 0.8.2), glue,
insight (>= 0.18.6), magrittr, parameters (>= 0.19.0),
performance (>= 0.10.0), rlang, stats, tibble, tidyr, WRS2 (>=
1.1-4), zeallot
glue, httr, jsonlite, purrr, tidyr, tibble, stringr, lubridate
dplyr, rmarkdown, ggplot2, broom, gridExtra, shiny, cubature,
knitr, tidyr
dplyr, rmarkdown, knitr, ggplot2, broom, gridExtra, shiny,
cubature, tidyr, tibble, utils
QCA, plyr, ggplot2, XML, randomForest, caret, dendextend,
magrittr
QCA, plyr, ggplot2, XML, randomForest, caret, dendextend,
magrittr, stats, utils, graphics, grDevices
graphics, stats, survival, data.table, numDeriv
graphics, stats, survival, data.table, numDeriv, drgee
RCurl, XML, rlist, wordcloud, tm, zoo, openair, lattice,
VennDiagram
RCurl, XML, rlist, wordcloud, tm, zoo, openair, lattice,
latticeExtra, RODBC, VennDiagram, beginr, RColorBrewer,
blogdown, ggplot2, httr, knitr, mongolite, plyr, shiny,
lubridate, rjson, stringi, stringr, purrr, data.table, htmltab
httr, RJSONIO, methods, data.table, stats
cli, data.table, dplyr, moments, rlang, R6, stats
glmnet, mvtnorm, pROC, dfoptim, caret, stats, base
Rcpp (>= 0.12.3), R.cache (>= 0.10.0), digest (>= 0.6.10),
stats, graphics, methods
Rcpp (>= 0.12.3), lowpassFilter (>= 1.0.0), R.cache (>=
0.10.0), digest (>= 0.6.10), stats, graphics, methods
Rcpp, magrittr, RColorBrewer, plyr, raster, rgdal, sp,
methods, igraph, scales, future, future.apply, rasterVis,
viridisLite, memuse
Rcpp, raster, future, future.apply, rasterVis, viridisLite,
memuse
crayon, curl (>= 2.3.0), jsonlite, yaml (>= 2.1.18)
ggplot2 (>= 3.3.0), magrittr, broom.mixed, labelled, arm,
parallel, purrr, tibble, dplyr, methods, lme4, rlang, forcats,
DBI, RSQLite, dbplyr
ggplot2 (>= 3.3.0), magrittr, broom.mixed, labelled, arm,
parallel, purrr, tibble, dplyr, methods, lme4, rlang, forcats
ggplot2 (>= 3.3.0), magrittr, broom.mixed, labelled, arm,
parallel, purrr, tibble, dplyr, methods, lme4, rlang, forcats,
stringr, httr, rmarkdown
ggplot2 (>= 3.3.0), magrittr, broom.mixed, labelled, arm,
parallel, purrr, tibble, dplyr, methods, lme4, rlang, forcats,
stringr, httr, rmarkdown, tidyr
ggplot2 (>= 3.3.0), magrittr, labelled, arm, parallel, purrr,
tibble, dplyr, methods, lme4, rlang, forcats, stringr, httr,
rmarkdown, tidyr, bib2df
ggplot2 (>= 3.3.0), magrittr, labelled, arm, parallel, purrr,
tibble, dplyr, methods, lme4, rlang, forcats, stringr, httr,
rmarkdown, tidyr
Rcpp, Matrix, doParallel, foreach, abind, fda, raster,
rasterVis, RColorBrewer
gh (>= 1.1.0), base64enc, fs, stringr, utils
dplyr, ellipsis, generics, pillar, purrr, rlang, tibble,
tidyselect, vctrs
dplyr, lubridate, purrr, readr, readxl, rlang, rvest, sf,
stringr, tibble, tools, xml2
spatstat.geom, spatstat.core, spatstat.linnet, stats, graphics
spatstat.geom, spatstat.random, spatstat.core,
spatstat.linnet, stats, graphics
spatstat.geom, spatstat.random, spatstat.explore,
spatstat.linnet, stats, graphics
matrixStats, splines, slam, lda, stringr
matrixStats, splines, slam, lda, stringr, Matrix, glmnet
matrixStats, splines, slam, lda, stringr, Matrix, glmnet, Rcpp
(>= 0.11.3), grDevices, graphics, stats, utils
matrixStats, splines, slam, lda, quanteda, stringr, Matrix,
glmnet, Rcpp (>= 0.11.3), grDevices, graphics, stats, utils,
data.table, quadprog
matrixStats, splines, slam, lda, quanteda, stringr, Matrix,
glmnet, Rcpp (>= 0.11.3), grDevices, graphics, stats, utils,
data.table, quadprog, parallel, methods
Rcpp (>= 0.11.3), data.table, glmnet, grDevices, graphics,
lda, Matrix, matrixStats, parallel, quadprog, quanteda, slam,
splines, stats, stringr, utils
jsonlite, stm, tm, SnowballC, stats, methods, utils
cli, crayon, dplyr, fansi, httr, lifecycle, purrr, R6,
rappdirs, readr, rlang, stringr, tibble, tidyjson, tidyr, utils
truncnorm, coda, Matrix, fields, rARPACK
Rcpp (>= 0.11), methods, stats, graphics, utils
Rcpp (>= 1.0), coda (>= 0.19), graphics, stats, utils,
grDevices
TMB, ggplot2, sn, stats, data.table, MASS
stats, gtools, parallel, RColorBrewer, methods
dvmisc, graphics, grDevices, Hmisc, lubridate, methods,
RColorBrewer, Rcpp (>= 0.12.15), stats, zoo
dvmisc, graphics, grDevices, Hmisc, lubridate, methods,
RColorBrewer, Rcpp (>= 0.12.15), stats, TTR, zoo
permutations (>= 1.0-4), partitions, magrittr, methods
permutations (>= 1.0-4), partitions, magrittr, methods,
mathjaxr
permutations (>= 1.0-4), partitions, magrittr, methods,
mathjaxr, disordR (>= 0.0-8)
permutations (>= 1.0-4), partitions, methods, mathjaxr,
disordR (>= 0.0-8)
dplyr, httr, jsonlite, pillar, stringi, tibble, urltools
jsonlite, maptools, raster, rgdal, rgeos, dplyr, RgoogleMaps,
openxlsx, leaflet, methods, httr
jsonlite, maptools, raster, rgdal, rgeos, dplyr, magrittr,
RgoogleMaps, openxlsx, leaflet, methods, httr, R.utils,
stringi, stringr, readr, lubridate, RCurl, geosphere, Rcpp (>=
0.12.1), igraph
jsonlite, maptools, raster, rgdal, rgeos, dplyr, magrittr,
RgoogleMaps, openxlsx, leaflet, methods, httr, R.utils,
stringi, stringr, readr, lubridate, RCurl, geosphere, Rcpp (>=
0.12.1), igraph, data.table
jsonlite, maptools, raster, rgdal, rgeos, dplyr, magrittr,
RgoogleMaps, openxlsx, leaflet, methods, httr, R.utils,
stringi, stringr, readr, lubridate, RCurl, geosphere, Rcpp (>=
0.12.1), igraph, nabor, data.table
jsonlite, maptools, raster, rgdal, rgeos, dplyr, RgoogleMaps,
openxlsx, leaflet, methods, httr, R.utils, stringi, stringr,
readr, lubridate, geosphere, Rcpp (>= 0.12.1), igraph, nabor,
foreach, doParallel
jsonlite, maptools, raster, rgdal, rgeos, dplyr, RgoogleMaps,
openxlsx, methods, httr, R.utils, stringi, stringr, readr,
lubridate, geosphere, Rcpp (>= 0.12.1), igraph, nabor, foreach,
doParallel
curl, readr, dplyr, httr, jsonlite, stringi, stringr, foreach,
lubridate, maptools, raster, rgdal, rgeos, RgoogleMaps,
openxlsx, methods, R.utils, geosphere, Rcpp (>= 0.12.1),
igraph, nabor, doParallel
curl, readr, dplyr, httr, jsonlite, stringi, stringr,
lubridate, maptools, raster, rgdal, rgeos, openxlsx, methods,
R.utils, geosphere, Rcpp (>= 0.12.1), igraph, nabor, rlang
curl, readr, dplyr, httr, jsonlite, stringi, stringr,
lubridate, maptools, raster, rgdal, rgeos, openxlsx, methods,
R.utils, geosphere, Rcpp (>= 0.12.1), igraph, nabor, rlang, sf
sp, curl, readr, dplyr, httr, jsonlite, stringi, stringr,
lubridate, maptools, raster, rgdal, rgeos, openxlsx, methods,
R.utils, geosphere, Rcpp (>= 0.12.1), igraph, nabor, rlang, sf
sp, curl, readr, dplyr, httr, jsonlite, stringi, stringr,
lubridate, maptools, raster, rgdal, rgeos, openxlsx, methods,
R.utils, geosphere, Rcpp (>= 0.12.1), igraph, nabor, rlang, sf,
lwgeom
sp, curl, readr, dplyr, httr, jsonlite, stringi, stringr,
lubridate, maptools, raster, rgdal, rgeos, openxlsx, methods,
R.utils, geosphere, Rcpp (>= 0.12.1), igraph, nabor, rlang,
lwgeom, sf
KernSmooth, ggplot2, gridExtra, plot3D, rgl, spatstat
KernSmooth, ggplot2, gridExtra, plot3D, rgl, spatstat, stats
KernSmooth, ggplot2, gridExtra, plot3D, rgl, spatstat.core,
spatstat.geom, stats
KernSmooth, ggplot2, gridExtra, plot3D, rgl, spatstat.core,
spatstat.geom, spatstat.random, stats
KernSmooth, ggplot2, gridExtra, plot3D, rgl, spatstat.explore,
spatstat.geom, spatstat.random, stats
splancs, dplyr, tidyr, magrittr, sf, rgdal, sp, ks, terra,
raster, SiMRiv, data.table, tibble, stringr, lubridate,
spatstat.geom, sparr, chron, ggplot2
splancs, dplyr, tidyr, magrittr, sf, rgdal, sp, ks, terra,
raster, SiMRiv, data.table, tibble, stringr, lubridate,
spatstat.geom, sparr, chron, ggplot2, geosphere, leaflet
splancs, dplyr, tidyr, magrittr, sf, rgdal, sp, ks, terra,
raster, SiMRiv, data.table, tibble, stringr, lubridate,
spatstat.geom, sparr, chron, ggplot2, geosphere, leaflet,
methods, cowplot, gstat
R6, Matrix, Rglpk, Rsymphony, dplyr, tidyr, feather,
lubridate, rlang, yaml, ggplot2
R6, Matrix, Rglpk, dplyr, tidyr, feather, lubridate, rlang,
yaml, ggplot2
R6, Matrix, Rglpk, dplyr, tidyr, arrow, lubridate, rlang,
yaml, ggplot2, tibble, methods
numDeriv, corpcor, MASS, mvtnorm, boot, minpack.lm, stats
assertthat (>= 0.2) , ggplot2, tidyr, grid, methods
graphics, grDevices, pbapply, stats, utils
dplyr (>= 0.8.0.1), tidyr, rlang, tibble
dplyr (>= 0.8.3), tidyr (>= 1.0.0), rlang, tibble, lifecycle
parallel, swfscMisc, pegas, ape, MASS, reshape2
ape, copula, ggplot2, graphics, Hmisc, methods, pegas,
RColorBrewer, Rcpp, reshape2, stats, swfscMisc, utils
ape, copula, ggplot2, graphics, Hmisc, methods, pegas,
phangorn, RColorBrewer, Rcpp, reshape2, stats, swfscMisc, utils
data.table, copula, DT, ggplot2, graphics, grid, gridExtra,
Hmisc, methods, pegas, phangorn, RColorBrewer, Rcpp, shiny,
shinyFiles, stats, survival (>= 2.40.1), swfscMisc, utils
ape, apex (>= 1.0.3), adegenet, dplyr (>= 0.7.6), tibble (>=
1.4.2), tidyr (>= 0.8.1), purrr (>= 0.2.5), data.table (>=
1.11.4), copula, DT, genepop (>= 1.0.5), ggplot2, graphics,
grid, gridExtra, Hmisc (>= 4.1), magrittr (>= 1.5), methods,
pegas (>= 0.11), phangorn (>= 2.4.0), RColorBrewer, Rcpp,
readr, rlang (>= 0.3.0.1), rmetasim, stats, stringi, swfscMisc
(>= 1.3), utils
FNN, ggplot2, colorspace, pcaPP, stats, ks
clue, clusterGeneration, MASS, animation, mlbench
animation, clue, cluster, clusterGeneration, fpc, MASS,
mlbench
animation, clue, cluster, clusterGeneration, fpc, MASS,
mlbench, Rcpp (>= 0.11.4)
animation, clue, cluster, clusterGeneration, fpc, MASS,
mlbench, Rcpp (>= 0.11.4), utils, stats, graphics, grDevices
animation, clue, cluster, clusterGeneration, fpc, dbscan (>=
0.9-2), MASS, mlbench, Rcpp (>= 0.11.4), utils, stats,
graphics, grDevices
animation, clue, cluster, clusterGeneration, dbscan (>=
0.9-2), fpc, graphics, grDevices, MASS, mlbench, Rcpp (>=
0.11.4), stats, utils
animation, clue, cluster, clusterGeneration, dbscan (>=
1.0-0), fpc, graphics, grDevices, MASS, mlbench, Rcpp (>=
0.11.4), stats, utils
clue, cluster, clusterGeneration, dbscan (>= 1.0-0), fpc,
graphics, grDevices, MASS, mlbench, Rcpp (>= 0.11.4), stats,
utils
assertthat, data.table, methods, R6, Rcpp, rmarkdown, pander,
speedglm, stats, stringr, zoo
Rcpp, magrittr, checkmate, matrixStats, ore, purrr, rlang,
tibble, glue
Rcpp, magrittr, checkmate, matrixStats, ore (>= 1.4.0), purrr,
rlang, tibble, glue
Rcpp, magrittr, checkmate, matrixStats, ore (>= 1.4.0), purrr,
rlang, tibble, glue (>= 1.3.0)
checkmate (>= 1.9.3), magrittr (>= 1.5), rlang (>= 0.3.3),
stats, stringi (>= 1.5), utils
rlang (>= 0.4.6), dplyr (>= 1.0.0), tidyr (>= 1.0.0), purrr
(>= 0.3.4), magrittr (>= 1.5), rgdal (>= 1.5.10), testthat (>=
2.3.2), rmarkdown (>= 2.3), stats, grDevices, methods,
graphics, utils, knitr
graphics, stats, Rcpp (>= 0.12.7), utils
multtest, igraph, methods, Matrix, Rgraphviz, RColorBrewer,
classInt, graph
multtest, igraph, rjson, ggplot2, reshape2
gtable, ggplot2, gWidgets, plyr, scales, gridExtra, grid
ggplot2, gWidgets, grid, gridExtra, gtable, plyr, scales,
gWidgetsRGtk2, RGtk2
ggplot2, gWidgets, grid, gtable, plyr, scales, gWidgetsRGtk2,
RGtk2, data.table
ggplot2, gWidgets, grid, gtable, plyr, scales, gWidgetsRGtk2,
RGtk2, data.table, grDevices, graphics, stats, utils
ggplot2 (>= 2.0.0), gWidgets, gridExtra, grid, gtable, plyr,
scales, gWidgetsRGtk2, RGtk2, data.table, grDevices, graphics,
stats, utils
ggplot2 (>= 2.0.0), gWidgets, gridExtra, grid, gtable, plyr,
scales, gWidgetsRGtk2, RGtk2, data.table, grDevices, graphics,
stats, utils, MASS
ggplot2 (>= 2.0.0), gWidgets2, gridExtra, grid, gtable, plyr,
scales, gWidgets2RGtk2, RGtk2, data.table, grDevices, graphics,
stats, utils, MASS
ggplot2 (>= 2.0.0), gWidgets2, gWidgets2tcltk, gridExtra,
grid, gtable, plyr, scales, data.table, grDevices, graphics,
stats, utils, MASS
ggplot2 (>= 2.0.0), gWidgets2, gridExtra, grid, gtable, plyr,
scales, data.table, grDevices, graphics, stats, utils, MASS
ggplot2 (>= 2.0.0), gWidgets2, gWidgets2tcltk (> 1.0.6),
gridExtra, grid, gtable, plyr, scales, data.table, DT, dplyr,
plotly, grDevices, graphics, stats, utils, MASS
backports, cli, enc, magrittr, purrr, rematch2, rlang,
rprojroot, tibble, withr
backports, cli, enc (>= 0.2), magrittr, purrr (>= 0.2.3),
rematch2, rlang, rprojroot, tibble (>= 1.4.2), withr
backports, cli, magrittr, purrr (>= 0.2.3), rematch2, rlang,
rprojroot, tibble (>= 1.4.2), tools, withr, xfun
tcltk, tcltk2, ape, pamr, e1071, class, lattice
tcltk, tcltk2, ape, pamr, e1071, class, lattice, tsne
downloader, graphics, stats, grDevices, AnalyzeFMRI
utils, plyr, data.table, grDevices, graphics
utils, plyr, data.table, grDevices, graphics, shiny, DT, stats
utils, plyr, data.table, grDevices, graphics, shiny, DT,
stats, shinyjs, bsplus, jsonlite, colourpicker, dplyr,
randomForestSRC, V8
utils, plyr, data.table, grDevices, graphics, shiny, DT,
stats, shinyjs, bsplus, jsonlite, colourpicker, dplyr,
randomForestSRC, V8, purrr, shinyWidgets
utils, plyr, data.table, grDevices, graphics, shiny, DT,
stats, shinyjs, bsplus, jsonlite, colourpicker, dplyr,
randomForestSRC, purrr, shinyWidgets
utils, plyr, data.table, grDevices, graphics, shiny, DT,
stats, shinyjs, bsplus, jsonlite, colourpicker, dplyr, ranger,
purrr, shinyWidgets
httr, MASS, ggplot2, survival, matrixStats
grid, rlang, readr, tidyr, purrr, timeDate, magrittr,
lubridate, dplyr (>= 0.7.0)
grid, rlang, readr, tidyr, purrr, timeDate, lubridate (>=
1.7.1), dplyr (>= 0.7.0)
dplyr (>= 0.7.0), grid, lubridate (>= 1.7.1), purrr, readr,
rlang (> 0.2.0), tidyr, timeDate, tsibble (>= 0.3.0)
pander, xtable, rapportools, rstudioapi, utils
methods, pryr, pander, xtable, rapportools, rstudioapi, utils
Hmisc, methods, pryr, pander, xtable, rapportools, rstudioapi,
utils, matrixStats
htmltools, matrixStats, methods, pander, pryr, rapportools,
RCurl, utils
grDevices, htmltools, matrixStats, methods, pander, pryr,
rapportools, RCurl, utils
grDevices, htmltools, lubridate, matrixStats, methods, pander,
pryr, rapportools, RCurl, utils
checkmate, dplyr, grDevices, htmltools, lubridate, magick,
matrixStats, methods, pander, pryr, rapportools, RCurl, stats,
tidyr, utils
checkmate, dplyr, grDevices, htmltools, lubridate, magick,
matrixStats, methods, pander, pryr, rapportools, RCurl, stats,
tcltk, tibble, tidyr, utils
base64enc, checkmate, dplyr, grDevices, htmltools, lubridate,
magick, matrixStats, methods, pander, pryr, rapportools, stats,
tcltk, tibble, tidyr, utils
utils, dreamerr, MASS, collapse, generics
d3r (>= 0.6.9), dplyr, htmlwidgets, htmltools
plyr (>= 1.8.4), ggplot2 (>= 3.1.0), lsr (>= 0.5), Rdpack (>=
0.7), stats, ggsci, MASS, matrixcalc
foreign, psych, plyr (>= 1.8.4), ggplot2 (>= 3.1.0), MASS, lsr
(>= 0.5), methods, Rdpack (>= 0.7), referenceIntervals, stats,
shiny, shinyBS, stringr, utils
foreign, psych, plyr (>= 1.8.4), ggplot2 (>= 3.1.0), MASS, lsr
(>= 0.5), methods, Rdpack (>= 0.7), stats, shiny, shinyBS,
stringr, utils
foreign, plyr (>= 1.8.4), ggplot2 (>= 3.1.0), MASS, lsr (>=
0.5), methods, Rdpack (>= 0.7), stats, shiny, shinyBS, stringr,
utils
sf, terra (>= 1.4-21), philentropy (>= 0.6.0), future.apply
data.table(>= 1.10), assertthat(>= 0.2), Metrics(>= 0.1),
xgboost(>= 0.6), glmnet(>= 2.0), parallel, kableExtra, tm(>=
0.7), naivebayes(>= 0.9), ClusterR(>= 1.1), FNN(>= 1.1),
liquidSVM(>= 1.2), ranger(>= 0.10), caret(>= 6.0),
doParallel(>= 1.0)
data.table(>= 1.10), assertthat(>= 0.2), parallel,
doParallel(>= 1.0), Metrics(>= 0.1)
data.table (>= 1.10), assertthat (>= 0.2), parallel,
doParallel (>= 1.0), Metrics (>= 0.1)
data.table (>= 1.10), Rcpp (>= 1.0), assertthat (>= 0.2),
parallel, doParallel (>= 1.0), Metrics (>= 0.1)
ggplot2, tibble, cli, magrittr, purrr, rlang, stringr, vctrs,
pillar, methods
ggplot2, tibble, cli, magrittr, purrr, rlang, stringr, vctrs,
pillar, methods, backports
ggplot2, tibble, cli, magrittr, purrr, rlang, stringr, vctrs,
pillar (>= 1.5.0), methods, backports
ggplot2, tibble, cli, magrittr, purrr, rlang, stringr, vctrs,
pillar (>= 1.5.0), methods, backports, lifecycle, withr
backports, cli, ggplot2, lifecycle, magrittr, methods, pillar
(>= 1.5.0), purrr, rlang, stringr, tibble, vctrs
Rcpp (>= 0.12.4), randtoolbox, matrixStats, doParallel,
nloptr, MHadaptive
Rcpp (>= 0.12.4), randtoolbox, MHadaptive
Rcpp (>= 0.12.4), randtoolbox, MHadaptive, nloptr
stats, utils, yaml (>= 2.2.0), nomnoml, shiny (>= 1.5.0)
ggplot2 (>= 2.2.1), goftest, gridExtra, stats
pROC, glmnet, MAP, Rcpp, foreach, doParallel
methods, lhs, ggplot2, dplyr, tidyr, purrr, tibble,
DiceKriging, DiceOptim, GPareto, emoa, mco, rgenoud, pso, GenSA
copula, eha, lme4, MASS, msm, mvmeta, optextras, parallel,
parfm, survival, SurvCorr
copula, eha, lme4, MASS, Matrix, msm, mvmeta, optextras,
parallel, parfm, survival, SurvCorr
clipper, checkmate, graph, methods, qpgraph, corpcor,
survival, rrcov, FactoMineR, elasticnet
Iso, nloptr, methods, plyr, survival, stats
rms, xlsx, tools, rstan(>= 2.8.1), INLA, methods
rms, xlsx, tools, rstan(>= 2.8.1), methods
rms, xlsx, tools, rstan (>= 2.18.1), tibble
stats, graphics, utils, survival, KMsurv
graphics, gridExtra, utils, combinat, Hmisc, zoo, km.ci,
KMsurv, gam
KMsurv, combinat, Hmisc, zoo, data.table, km.ci, grid,
gridExtra, rpart, gam
graphics, utils, stats, KMsurv, combinat, Hmisc, zoo, km.ci,
ggplot2, data.table, gridExtra, rpart, gam
graphics, utils, KMsurv, combinat, stringr, Hmisc, zoo, gam
graphics, grDevices, stats, utils, knitr, KMsurv, ggplot2,
data.table, zoo, grid, gridExtra, km.ci
graphics, grDevices, stats, utils, knitr, KMsurv, ggplot2,
data.table, zoo, grid, gridExtra, km.ci, xtable
magrittr (>= 1.5), mvtnorm, rlang, purrr, forcats, dplyr,
tidyr, tibble, ggplot2, survival (>= 2.43), methods
broom, dplyr, forcats, ggplot2, lifecycle (>= 0.2.0), magrittr
(>= 1.5), methods, mvtnorm, purrr, rlang, survival (>= 2.43),
tibble, tidyr (>= 1.1),
Rcpp (>= 0.11.0), MASS, Matrix, nlme, spatstat (>= 1.36-0)
Rcpp (>= 0.11.1), MASS, Matrix, nlme, spatstat (>= 1.36-0)
Rcpp (>= 0.11.1), polyCub (>= 0.8.0), MASS, Matrix, nlme,
spatstat.geom
Rcpp (>= 0.11.1), polyCub (>= 0.8.0), MASS, Matrix, nlme,
spatstat.geom, spatstat (>= 2.0)
graphics, stats, utils, MASS, colorspace, xtable, spc, msm,
quadprog, gpclib, spatstat (>= 1.17-0), intervals
graphics, utils, MASS, colorspace, xtable, spc, msm, quadprog,
gpclib, spatstat (>= 1.17-0), intervals
MASS, Matrix, spatstat (>= 1.17-0), polyCub
DALEX (>= 2.2.1), ingredients, ggplot2, gridExtra, pec,
survival
DALEX (>= 2.2.1), ggplot2, pec, survival, patchwork
stats, graphics, splines, lattice, minqa, numDeriv
stats, graphics, splines, lattice, minqa, numDeriv, mitools
(>= 2.4)
stringr (>= 0.5), plyr, dplyr, magrittr, purrr
stringr (>= 0.5), plyr, dplyr, rlang, magrittr, purrr,
ggplot2, scales, tidyr, DT, assertthat
dplyr, rlang, magrittr, purrr, ggplot2, scales, tidyr, DT,
assertthat
Rcpp (>= 0.12.12),data.table,matrixStats, ggplot2, laeken,
methods, dplyr
KernSmooth, np, survival, doParallel, parallel, doRNG,
foreach, TPmsm
KernSmooth, np, survival, doParallel, parallel, doRNG,
foreach, TPmsm, Rcpp, ggplot2, gridExtra, plotly
survival, survcomp, survsim, Biobase, desiR, readr, broom,
magrittr, ggplot2, cowplot, ggthemes, viridis, data.table,
pander, png, testthat
survival, survcomp, desiR, ggplot2, cowplot, ggthemes, viridis
graphics, Matrix, methods, splines, stats, utils
survival, survminer, utils, stats, ggplot2
grDevices, graphics, stats, utils, survival, rlang, dplyr,
forcats, magrittr, purrr, stringr, tibble, tidyr, gridExtra,
ggplot2 (>= 2.2.1), scales, survminer (> 0.4.0), cowplot,
tidytidbits
grDevices, graphics, stats, utils, survival, rlang (>= 0.2.0),
dplyr (>= 0.8.0), forcats, magrittr, purrr, stringr, tibble,
tidyr, gridExtra, ggplot2 (>= 2.2.1), scales, survminer (>
0.4.0), cowplot, tidytidbits
copula, stats, methods, splines2, survival, graphics,
matrixcalc
copula, stats, splines2, survival, graphics, matrixcalc
survival, KernSmooth, graphics, stats, utils
pracma, quadprog, kernlab, Matrix, stats, Hmisc
dplyr, tidyr, ggplot2, stringr, magrittr
dplyr, tidyr, ggplot2, stringr, magrittr, forcats, glue
tidyr, ggplot2, stringr, magrittr, ggpath, glue, prismatic
grid, gridExtra, methods, scales, survival, stats
grid, gridExtra(>= 2.0), methods, scales, survival, stats,
magrittr
ggpubr, grid, gridExtra(>= 2.0), magrittr, maxstat, methods,
scales, survival, stats, tidyr
grid, gridExtra(>= 2.0), magrittr, maxstat, methods, scales,
survival, stats, broom, dplyr, tidyr, survMisc, cmprsk
grid, gridExtra(>= 2.0), magrittr, maxstat, methods, scales,
survival, stats, broom, dplyr, tidyr, survMisc, cmprsk, purrr,
tibble
grid, gridExtra(>= 2.0), magrittr, maxstat, methods, scales,
survival, stats, broom, dplyr, tidyr, survMisc, purrr, tibble
grid, gridExtra (>= 2.0), magrittr, maxstat, methods, scales,
survival, stats, broom, dplyr, tidyr, survMisc, purrr, tibble
grid, gridExtra (>= 2.0), magrittr, maxstat, methods, scales,
survival, stats, broom, dplyr, tidyr, survMisc, purrr, tibble,
rlang
grid, gridExtra (>= 2.0), magrittr, maxstat, methods, scales,
survival, stats, broom, dplyr, tidyr, survMisc, purrr, tibble,
rlang, ggtext (>= 0.1.0)
cmprsk, dplyr, openxlsx, stats, survival, tibble
stats, utils, survival, dplyr, ggplot2, broom, colorspace,
gridExtra
SuperLearner, Matrix, plyr, tidyr, stringr, ggplot2
Matrix, speedglm, SuperLearner, plyr, dplyr, tidyr (>= 0.8.0),
stringr, ggplot2, ggsci
breakDown, ggplot2, pec, scales, survival, survminer
methods, graphics, grDevices, stats, Matrix, mixsqp, reshape,
ggplot2
methods, graphics, grDevices, stats, Matrix, matrixStats,
mixsqp, reshape, crayon, ggplot2
svGUI (>= 1.0.0), utils, methods, rstudioapi (>= 0.7)
utils, tools, codetools, svMisc, operators
vars, expm, reshape2, ggplot2, copula, clue, pbapply,
steadyICA, tsDyn, DEoptim
vars, expm, reshape2, ggplot2, copula, clue, pbapply,
steadyICA, tsDyn, DEoptim, zoo
expm, reshape2, ggplot2, copula, clue, pbapply, steadyICA,
tsDyn, DEoptim, zoo, strucchange
expm, reshape2, ggplot2, copula, clue, pbapply, steadyICA,
tsDyn, DEoptim, zoo, strucchange, Rcpp
expm, reshape2, ggplot2, copula, clue, pbapply, steadyICA,
DEoptim, zoo, strucchange, Rcpp
ggplot2, GGally, gridExtra, scales, reshape2, RColorBrewer,
grDevices
grid, rjson, Rook, methods, Rcpp (>= 0.9.9)
Rcpp, assertthat, univariateML, wdm, fGarch
gtools, graphics, stats, methods, Matrix, utils
httr, pack, stringr, xml2, tools, colorspace, grDevices,
graphics, methods, stats
data.table, stringr, reshape2, RJSONIO, httr
Rcpp, purrr, quanteda, LiblineaR, text2vec, data.table
Rcpp, purrr, quanteda, LiblineaR, proxy, data.table
Rcpp, purrr, quanteda, LiblineaR, proxy, data.table, cli
Rcpp, purrr, quanteda, LiblineaR, proxy, data.table, cli,
combinat
dplyr, lubridate, magrittr, methods, parallel, readr, rlang,
stringr, swfscDAS (>= 0.3.0), swfscMisc, tidyr
dplyr, lubridate, magrittr, methods, parallel, purrr, readr,
rlang, sf, swfscMisc, tidyr
graphics, grDevices, maps, spatstat, stats, utils
graphics, grDevices, ggplot2, maps, reshape2, spatstat, stats,
utils
graphics, grDevices, dplyr, ggplot2, ggrepel, mapdata,
magrittr, tibble, maps, reshape2, rlang, spatstat, stats,
tidyr, utils
graphics, grDevices, dplyr, ggplot2, ggrepel, kknn, mapdata,
magrittr, tibble, maps, rlang, sf, spatstat.geom, stats, tidyr,
utils
graphics, grDevices, dplyr, ggplot2, ggrepel, HDInterval,
kknn, mapdata, magrittr, tibble, maps, rlang, sf,
spatstat.geom, stats, tidyr, utils
tidyr, dplyr, ggplot2, data.table, magrittr, utils
stringr, plotrix, pwr, testthat, openintro
stringr, plotrix, pwr, testthat, openintro, httr, whisker,
yaml
stringr, testthat, httr, yaml, RCurl, digest
stringr, testthat, httr, yaml, RCurl, digest, tools
stringr, testthat, httr (>= 1.1.0), yaml, RCurl, digest,
tools, utils, methods
stringr, testthat (>= 1.0.2), httr (>= 1.1.0), yaml, RCurl,
digest, tools, methods
stringr, yaml, rmarkdown, whisker, utils
swirl (>= 2.4.2), stringr, yaml, rmarkdown, whisker, shiny,
shinyAce, base64enc
swirl (>= 2.4.2), stringr, yaml, rmarkdown, whisker, shiny,
shinyAce, base64enc, readr
purrr, dplyr, tidyr, jsonlite, magrittr, tibble, curl
purrr, dplyr, tidyr (>= 1.0.0), jsonlite, magrittr, tibble,
curl
dplyr, tidyr (>= 1.0.0), ggplot2, httr, jsonlite, lubridate,
purrr, sf, rgdal, stringr, tibble
dplyr, tidyr (>= 1.0.0), ggplot2, httr, jsonlite, lubridate,
purrr, sf, stringr, tibble
dplyr, tidyr (>= 1.0.0), ggplot2, RCurl, httr, jsonlite,
lubridate, purrr, sf, stringr, tibble
dplyr, jsonlite, magrittr, purrr, stringr, tibble, tidyr,
lubridate, crayon, httr, ggplot2
dplyr, jsonlite, magrittr, purrr, stringr, tibble, tidyr,
crayon, httr, ggplot2
data.table, stringi, stats, textclean, textshape (>= 1.0.1),
utils
methods, LinkedMatrix (>= 1.3.0), ff, bit
methods, Rcpp, harmony, uwot, irlba, class, purrr, dplyr,
ggplot2, stats, utils, magrittr, data.table, tibble, Matrix,
tidyr, rlang, RColorBrewer, ggrastr, ggrepel, RANN
lattice, igraph, MASS, LDheatmap, qtl, synbreedData (>= 1.3)
methods, doBy, igraph, lattice, MASS, LDheatmap, abind, BGLR,
regress (>= 1.3-8)
methods, doBy, igraph, lattice, MASS, LDheatmap, abind, BGLR,
regress (>= 1.3-8), parallel, doParallel, foreach
abind, BGLR, doBy, doParallel, foreach, grid, igraph, lattice,
LDheatmap, MASS, methods, parallel, qtl, regress (>= 1.3-8)
abind, BGLR, doBy, doParallel, foreach, igraph, lattice, qtl,
regress (>= 1.3-8), MASS, methods, LDheatmap
Rcpp (>= 0.10.4), methods, graphics, Matrix, compiler, stats,
parallel
methods, graphics, Matrix, compiler, stats, parallel
dplyr, ggplot2, lubridate, magrittr, metR, raster, RNCEP,
stringr, tidyr, tibble
dplyr, ggplot2, lubridate, magrittr, sf, rnaturalearth,
rnaturalearthdata, metR, raster, RNCEP, stringr, tidyr, tibble
dplyr, ggplot2, lubridate, magrittr, sf, rnaturalearth,
rnaturalearthdata, metR, raster, RNCEP, stringr, tidyr, tibble,
kohonen
data.table (>= 1.9.6), Rcpp, acs (>= 2.1), retry
graphics, stats, utils, rpart, party, foreign, plyr, proto
graphics, stats, utils, rpart, party, foreign, plyr, proto,
polspline, randomForest
graphics, stats, utils, rpart, party, foreign, plyr, proto,
polspline, randomForest, classInt
graphics, stats, utils, rpart, party, foreign, plyr, proto,
polspline, randomForest, classInt, mipfp
lattice, MASS, methods, nnet, ggplot2, graphics, stats, utils,
rpart, party, foreign, plyr, proto, polspline, randomForest,
ranger, classInt, mipfp
lattice, MASS, methods, nnet, ggplot2, graphics, stats, utils,
rpart, party, foreign, plyr, proto, polspline, randomForest,
ranger, classInt, mipfp, survival, stringr
lattice, MASS, methods, nnet, ggplot2, graphics, stats, utils,
rpart, party, foreign, plyr, proto, polspline, randomForest,
ranger, classInt, mipfp, survival, stringr, rmutil, broman
signal,tframe, ggplot2 (>= 2.1.0), reshape2, polynom, bitops,
zoo
stats (>= 2.14.0), sandwich (>= 2.2-9), MASS, methods
textshape (>= 1.3.0), NLP, zoo, dtt, stats, graphics, dplyr,
tidyr,
textshape (>= 1.3.0), NLP, zoo, dtt, stats, graphics, dplyr,
tidyr, rlang
httr (>= 0.6.1), jsonlite (>= 0.9.14), lubridate, plyr (>=
1.8.1), stringr
httr, jsonlite, lubridate, plyr, stringr
coda, dplyr, ggplot2, gridExtra, hdrcde, MCMCglmm, MCMCvis,
plyr, rjags, runjags, stats, SIBER
coda, ggplot2, gridExtra, hdrcde, MCMCglmm, plyr, rjags,
stats, SIBER
coda, data.table, ggplot2, gridExtra, hdrcde, MCMCglmm, plyr,
rjags, stats, ArgumentCheck
coda, data.table, ggplot2, gridExtra, hdrcde, MCMCglmm, plyr,
rjags, stats
taRifx, sp, rgdal, RJSONIO, rgeos, RCurl, methods
survey, survival, gee, grDevices, graphics, stats, xtable
gee, MASS, stats, survey, survival, xtable
kableExtra, MASS, stats, survey (>= 4.1)
dplyr (>= 1.0.0), janitor, magrittr, purrr, rlang, stringr,
tibble, tidyr
utils, data.table (>= 1.9.8), dplyr, magrittr, R6, rlang (>=
0.3.0), tidyselect
methods, utils, data.table (>= 1.9.8), dplyr, magrittr, R6,
rlang (>= 0.3.0), tidyselect
methods, utils, data.table (>= 1.9.8), dplyr, magrittr, R6,
rlang (>= 0.3.1), tidyselect
methods, stats, utils, data.table (>= 1.9.8), dplyr, magrittr,
R6, rlang (>= 0.3.1), tidyselect
htmltools, magrittr, shiny, jpeg, png, webshot
glue, magrittr, rlang (>= 0.4.3), tidyselect (>= 0.4.3), purrr
psych, MOTE, stats, dplyr, tibble, magrittr, data.table,
tidyselect, lavaan, mirt, ggplot2
survival, stats, lmtest, mgcv, nortest, tableone
survey, MASS, e1071, zoo, gmodels, nlme, lmerTest, labelled,
methods
survey, MASS, e1071, zoo, gmodels, nlme, lmerTest, labelled
survey, MASS, e1071, zoo, gmodels, nlme, labelled
config, future, httr, iterators, jsonlite, jsonvalidate,
lubridate, purrr, R6, RCurl, rlist, stringr, urltools
config, future, httr, jsonlite, jsonvalidate, lubridate,
purrr, R6, RCurl, rlist, stringr, urltools
ggplot2, tables, graphics, grDevices, stats, tools, utils,
grid
dplyr (>= 1.0.2), rlang, tidyr, kableExtra (>= 0.9.0),
tidyselect
dplyr (>= 1.0.2), rlang, tidyr, kableExtra (>= 0.9.0)
dplyr (>= 1.0.2), rlang, tidyr, kableExtra (>= 0.9.0), DT
dplyr (>= 1.0.2), rlang, tidyr, kableExtra (>= 0.9.0), DT,
spork (>= 0.2.0)
dplyr (>= 1.0.2), rlang, tidyr, kableExtra (>= 0.9.0), DT,
spork (>= 0.2.2)
dplyr (>= 1.0.2), rlang, tidyr, kableExtra (>= 0.9.0), DT,
spork (>= 0.2.2), magrittr, fs
torch, hardhat, magrittr, glue, progress, rlang, methods,
tibble, vctrs
torch (>= 0.4.0), hardhat, magrittr, glue, progress, rlang,
methods, tibble, coro, vctrs
magrittr, dplyr, purrr, tidyr, crayon, ggplot2
magrittr, tibble, dplyr, purrr, tidyr, crayon, ggplot2
checkmate, rlang, tibble, dplyr, tidyr, magrittr, tidyselect,
testthat, crayon, methods, purrr, stringr
dplyr (>= 0.7), FactoMineR, ggplot2 (>= 3.0.0), grDevices,
magrittr, methods, rlang, stats, tidyr, utils
dplyr (>= 0.7), FactoMineR, ggplot2 (>= 3.0.0), grDevices,
magrittr, methods, plyr, rlang, stats, tidyr, utils
ca (>= 0.71), ggplot2 (>= 3.2.1), grDevices, methods, rlang
(>= 0.4.0), stats, utils
arkhe (>= 0.3.0), dimensio, ggplot2, grDevices, methods,
rlang, stats, utils
arkhe (>= 0.5.0), boot, kairos (>= 1.1.0), ggplot2, methods,
rlang, stats, utils
arkhe (>= 1.0.0), ggplot2, methods, rlang, stats, utils
dplyr, methods, raster, sp, spex (>= 0.4.0), spbabel (>=
0.4.8), tibble, viridis
dplyr, methods, raster, sp, spatstat, spex (>= 0.4.0), spbabel
(>= 0.4.8), tibble, viridis, gibble, fasterize, magrittr, rlang
dplyr, fasterize, gibble, magrittr, raster, rlang, silicate,
spatstat, tibble
dplyr, fasterize, magrittr, raster, silicate, spatstat, tibble
dplyr, fasterize, magrittr, raster, silicate, spatstat.geom,
tibble
assertthat, dplyr, data.table, magrittr, purrr, rlang, stats,
stringr, tibble, tidyr
graphics, grDevices, pracma, utils, R.matlab
grDevices, grid, gridExtra, latticeExtra, MASS, RColorBrewer,
stats, utils
stats, broom, dplyr, pwr, pixiedust, car, ggplot2, lazyeval,
sjmisc, haven, ryouready, vcd, cowplot, nortest
stats, broom, dplyr, pwr, pixiedust, car, ggplot2, lazyeval,
sjmisc, haven, ryouready, vcd, cowplot, nortest, lsr
stats, methods, broom, magrittr, dplyr, pwr, pixiedust, car,
ggplot2, lazyeval, sjmisc, haven, ryouready, vcd, cowplot,
nortest, lsr, viridis
stats, methods, broom, magrittr, dplyr, pwr, pixiedust, car,
ggplot2, lazyeval, sjlabelled, sjmisc, haven, ryouready, vcd,
cowplot, nortest, lsr, viridis
stats, methods, broom, magrittr, dplyr, pwr, pixiedust, car,
ggplot2, lazyeval, sjlabelled, sjmisc, haven, ryouready, vcd,
cowplot, nortest, lsr, viridis, DescTools
stats, methods, broom, magrittr, dplyr, pwr, pixiedust, car,
ggplot2, lazyeval, sjlabelled, sjmisc, haven, ryouready, vcd,
nortest, lsr, viridis, DescTools
stats, methods, broom, magrittr, pwr, pixiedust, car, ggplot2,
nortest, viridis, DescTools
broom, car, DescTools, ggplot2, magrittr, methods, nortest,
pixiedust, pwr, stats, viridis
broom, car, DescTools, ggplot2, magrittr, methods, pixiedust,
stats, utils, viridis
stats, broom, dplyr, pwr, pixiedust, car, ggplot2, lazyeval,
sjmisc, haven, ryouready, vcd
cubature, mvtnorm, SpatialExtremes, copula, stats, utils
MASS,devEMF,segmented,sfsmisc,smoother,pracma,data.table,broom,colorRamps,
minpack.lm, tools, baseline, graphics
MASS,devEMF,segmented,sfsmisc,smoother,deSolve,
pracma,data.table,broom,colorRamps, minpack.lm, tools,
baseline, graphics
raster, sf, isoband, methods, lwgeom, grDevices, graphics
raster, sf, isoband, methods, grDevices, graphics
terra, sf, isoband, methods, grDevices, graphics
stringi, stringr, base64enc, digest, htmltools
ape, bipartite, MPSEM, phytools, stats, utils, vegan
dplyr, magrittr, purrr, stringi, stringr, tidyr
dplyr, magrittr, purrr, rlang, stringi, stringr, tidyr
methods, Rcpp (>= 1.0.0), optimx, futile.logger
data.table, digest, futile.logger, future.apply, progressr,
methods, Rcpp (>= 1.0.0), optimx
data.table, digest, futile.logger, future.apply, optimx,
progressr, methods, mets, R6, Rcpp (>= 1.0.0), survival
ggplot2, lubridate, dplyr, randomForest, plyr, reshape2,
RColorBrewer, drat
ggplot2, dplyr, magrittr, scales, RColorBrewer, shadowtext
ggplot2, dplyr, scales, RColorBrewer, shadowtext, tibble
ggplot2, dplyr, scales, RColorBrewer, shadowtext, tibble,
packcircles, fmsb
assertthat, magrittr, data.table, openxlsx (>= 4.0.0), purrr,
rlang, stringi, colt, crayon, withr
assertthat, magrittr, data.table, dplyr, dtplyr, openxlsx (>=
4.0.0), purrr, stringi, utils
assertthat, magrittr, data.table, openxlsx (>= 4.0.0), purrr,
stringi, utils
assertthat, magrittr, data.table, openxlsx (>= 4.0.0), purrr,
rlang, stringi, utils
assertthat, magrittr, data.table, openxlsx (>= 4.0.0), purrr,
rlang, stringi, utils, colt, crayon
assertthat, magrittr, data.table, openxlsx (>= 4.0.0),
stringi, colt, crayon, withr
lambda.r (>= 1.1.6), lambda.tools, futile.logger (>= 1.3.7),
futile.matrix (>= 1.2.1), tawny.types (>= 1.1.2), zoo, xts,
PerformanceAnalytics, quantmod
lambda.r (>= 1.1.0), futile.logger (>= 1.3.0), futile.options,
futile.any, zoo, xts, quantmod
lambda.r (>= 1.1.0), lambda.tools, futile.logger (>= 1.3.0),
futile.options, zoo, xts, quantmod
R6, jsonlite, dplyr, lazyeval, magrittr, tibble, knitr, rlang,
stringr
R6, jsonlite, dplyr, lazyeval, magrittr, tibble, knitr, rlang,
stringr, crayon, tidyr, utils, taxize
R6, jsonlite, dplyr, lazyeval, magrittr, tibble, knitr, rlang,
stringr, crayon, tidyr, utils, pillar, methods, viridisLite,
cli
dplyr, magrittr, tibble, rlang, stringr, crayon, utils,
pillar, methods, viridisLite, cli
dplyr, DBI, arkdb, tibble, memoise, readr, rappdirs, rlang,
magrittr, stringi, progress, utils, dbplyr, RSQLite, curl,
jsonlite
dplyr, DBI, arkdb (>= 0.0.6), tibble, memoise, readr,
rappdirs, rlang, magrittr, stringi, progress, utils, dbplyr,
RSQLite, curl, jsonlite, duckdb, contentid
dplyr, DBI, arkdb (> 0.0.10), tibble, memoise, readr,
rappdirs, rlang, magrittr, stringi, progress, utils, dbplyr,
RSQLite, curl, jsonlite, duckdb, contentid
dplyr, DBI, arkdb (> 0.0.10), tibble, readr, rappdirs, rlang,
magrittr, stringi, progress, utils, dbplyr, curl, jsonlite,
duckdb, contentid, R.utils
dplyr, DBI, arkdb (>= 0.0.16), tibble, readr, rappdirs, rlang,
magrittr, stringi, progress, utils, dbplyr, curl, jsonlite,
duckdb, contentid, R.utils
XML, RCurl (>= 1.6), stringr, plyr, httr (>= 0.2), RJSONIO,
foreach, ape, Taxonstand
XML, RCurl (>= 1.6), stringr, plyr, httr (>= 0.2), RJSONIO,
foreach, ape, Taxonstand, NCBI2R
XML, RCurl (>= 1.6), stringr, plyr, httr (>= 0.2), RJSONIO,
foreach, ape, Taxonstand, reshape2, data.table
XML, RCurl (>= 1.6), stringr, plyr, httr (>= 0.2), RJSONIO,
foreach, ape, Taxonstand, reshape2, data.table, reshape
XML, RCurl (>= 1.6), stringr, plyr, httr (>= 0.2), RJSONIO,
foreach, ape, Taxonstand, reshape2, data.table, reshape, vegan
XML, RCurl (>= 1.6), stringr, plyr, httr (>= 0.2), RJSONIO,
foreach, ape, Taxonstand, reshape2, data.table, reshape, vegan,
rgbif
XML, RCurl (>= 1.6), stringr, plyr, httr (>= 0.2), RJSONIO,
foreach, ape, Taxonstand, reshape2, data.table, vegan,
assertthat
XML, RCurl (>= 1.6), stringr, plyr, httr (>= 0.2), jsonlite,
foreach, ape, Taxonstand, reshape2, data.table, vegan,
assertthat, bold,
XML, RCurl (>= 1.6), stringr, plyr, httr (>= 0.2), jsonlite,
foreach, ape, Taxonstand, reshape2, data.table, vegan, bold
XML (>= 3.98.1.1), RCurl (>= 1.6), reshape2, stringr, plyr,
httr (>= 0.6.1), jsonlite, foreach, ape, Taxonstand,
data.table, bold
graphics, methods, stats, utils, httr (>= 1.0.0), openssl, XML
(>= 3.98.1.1), jsonlite, reshape2, stringr, plyr, foreach, ape,
bold, data.table
graphics, methods, stats, utils, httr (>= 1.0.0), XML (>=
3.98.1.1), jsonlite, reshape2, stringr, plyr, foreach, ape,
bold, data.table
graphics, methods, stats, utils, httr (>= 1.0.0), xml2 (>=
0.1.2), jsonlite, reshape2, stringr, plyr, foreach, ape, bold,
data.table, rredlist (>= 0.1.0)
graphics, methods, stats, utils, httr (>= 1.1.0), xml2 (>=
0.1.2), jsonlite, reshape2, stringr, plyr, foreach, ape, bold
(>= 0.3.5), data.table, rredlist (>= 0.1.0), rotl (>= 0.5.0)
graphics, methods, stats, utils, httr (>= 1.2.1), xml2 (>=
1.0.0), jsonlite, reshape2, stringr, plyr, foreach, ape, bold
(>= 0.3.5), data.table, rredlist (>= 0.1.0), rotl (>= 3.0.0)
graphics, methods, stats, utils, httr (>= 1.2.1), xml2 (>=
1.0.0), jsonlite, reshape2, stringr, plyr, foreach, ape, bold
(>= 0.3.5), data.table, rredlist (>= 0.1.0), rotl (>= 3.0.0),
ritis (>= 0.5.0), tibble (>= 1.2)
graphics, methods, stats, utils, httr (>= 1.2.1), xml2 (>=
1.0.0), jsonlite, reshape2, stringr, plyr, foreach, ape, bold
(>= 0.3.5), data.table, rredlist (>= 0.1.0), rotl (>= 3.0.0),
ritis (>= 0.5.0), tibble (>= 1.2), worrms (>= 0.1.0), natserv
(>= 0.1.4)
graphics, methods, stats, utils, httr (>= 1.2.1), xml2 (>=
1.0.0), jsonlite, reshape2, stringr, plyr, foreach, ape, bold
(>= 0.3.5), data.table, rredlist (>= 0.3.0), rotl (>= 3.0.0),
ritis (>= 0.5.0), tibble (>= 1.2), worrms (>= 0.1.0), natserv
(>= 0.1.4), wikitaxa (>= 0.1.4)
graphics, methods, stats, utils, crul (>= 0.7.0), xml2 (>=
1.2.0), jsonlite, foreach, ape, zoo, data.table, tibble (>=
1.2), bold (>= 0.8.6), rredlist, rotl (>= 3.0.0), ritis (>=
0.7.6), worrms (>= 0.4.0), natserv (>= 1.0.0), wikitaxa (>=
0.3.0), R6, crayon, cli, phangorn, conditionz
graphics, methods, stats, utils, crul (>= 0.4.0), httr (>=
1.2.1), xml2 (>= 1.0.0), jsonlite, reshape2, stringr, plyr,
foreach, ape, zoo, bold (>= 0.3.5), data.table, rredlist (>=
0.3.0), rotl (>= 3.0.0), ritis (>= 0.5.0), tibble (>= 1.2),
worrms (>= 0.1.0), natserv (>= 0.1.4), wikitaxa (>= 0.1.4)
graphics, methods, stats, utils, crul (>= 0.4.0), httr (>=
1.2.1), xml2 (>= 1.0.0), jsonlite, reshape2, stringr, plyr,
foreach, ape, zoo, bold (>= 0.3.5), data.table, rredlist (>=
0.5.0), rotl (>= 3.0.0), ritis (>= 0.5.0), tibble (>= 1.2),
worrms (>= 0.1.0), natserv (>= 0.1.4), wikitaxa (>= 0.1.4)
graphics, methods, stats, utils, crul (>= 0.7.0), xml2 (>=
1.2.0), jsonlite, reshape2, stringr, plyr, foreach, ape, zoo,
bold (>= 0.8.6), data.table, rredlist (>= 0.5.0), rotl (>=
3.0.0), ritis (>= 0.7.6), tibble (>= 1.2), worrms (>= 0.3.2),
natserv (>= 0.3.0), wikitaxa (>= 0.3.0)
graphics, methods, stats, utils, crul (>= 0.7.0), xml2 (>=
1.2.0), jsonlite, reshape2, stringr, plyr, foreach, ape, zoo,
bold (>= 0.8.6), data.table, rredlist (>= 0.5.0), rotl (>=
3.0.0), ritis (>= 0.7.6), tibble (>= 1.2), worrms (>= 0.3.2),
natserv (>= 0.3.0), wikitaxa (>= 0.3.0), phangorn
graphics, methods, stats, utils, crul (>= 0.7.0), xml2 (>=
1.2.0), jsonlite, reshape2, stringr, plyr, foreach, ape, zoo,
bold (>= 0.8.6), data.table, rredlist (>= 0.5.0), rotl (>=
3.0.0), ritis (>= 0.7.6), tibble (>= 1.2), worrms (>= 0.4.0),
natserv (>= 0.3.0), wikitaxa (>= 0.3.0), R6, crayon, cli,
phangorn
graphics, methods, stats, utils, crul (>= 0.7.0), xml2 (>=
1.2.0), jsonlite, foreach, ape, zoo, data.table, tibble (>=
1.2), bold (>= 0.8.6), rredlist (>= 0.5.0), rotl (>= 3.0.0),
ritis (>= 0.7.6), worrms (>= 0.4.0), natserv (>= 0.3.0),
wikitaxa (>= 0.3.0), R6, crayon, cli, phangorn
graphics, methods, stats, utils, crul (>= 0.7.0), xml2 (>=
1.2.0), jsonlite, foreach, ape, zoo, data.table, tibble (>=
1.2), bold (>= 0.8.6), rredlist (>= 0.5.0), rotl (>= 3.0.0),
ritis (>= 0.7.6), worrms (>= 0.4.0), natserv (>= 1.0.0),
wikitaxa (>= 0.3.0), R6, crayon, cli, phangorn
graphics, methods, stats, utils, crul (>= 0.7.0), xml2 (>=
1.2.0), jsonlite, foreach, ape, zoo, data.table, tibble (>=
1.2), bold (>= 0.8.6), rredlist (>= 0.5.0), rotl (>= 3.0.0),
ritis (>= 0.7.6), worrms (>= 0.4.0), natserv (>= 1.0.0),
wikitaxa (>= 0.3.0), R6, crayon, cli, phangorn, conditionz
foreign, methods, taxize, stringdist, vegdata
foreign, grDevices, methods, taxize, stringdist, vegdata
foreign, methods, stats, taxa, taxize, stringdist, utils,
vegdata
biblio, foreign, methods, stats, taxize, stringdist, stringr,
utils, vegdata
purrr, dplyr, vroom, ggplot2, rje, withr, utils
purrr, dplyr, vroom, ggplot2, rje, withr, utils, stringr
taxize, wikitaxa, plyr, sqldf, stringr, stringdist, rmarkdown,
stringi
taxize, wikitaxa, plyr, sqldf, stringr, stringdist
crayon, ggplot2, glue, methods, rlang, scales, tibble, vctrs
crayon, ggplot2, glue, lifecycle, methods, rlang, scales,
tibble, vctrs
xts, zoo, dplyr, lazyeval, PerformanceAnalytics
xts, zoo, dplyr (>= 1.0.0), tibble, ggplot2, rlang
xts, zoo, dplyr (>= 1.0.0), tibble, rlang
xts, zoo, dplyr (>= 0.8.0.0), tibble, rlang
variables, basefun, sandwich, coneproj, methods
boot, dplyr, lubridate, purrr, rlang, tibble, tidyr
config, data.table, dplyr, DT, ggplot2, ggpubr, golem,
grDevices, magrittr, methods, openxlsx, plotly, readr,
reshape2, rlang, rstatix, shiny, shinyFeedback, shinyjs, stats,
stringr, tidyr, tidyselect, utils
CompQuadForm, ggplot2, GSA, stats, utils
CompQuadForm, ggplot2, GSA, KernSmooth, stats, utils
CompQuadForm, ggplot2, graphics, GSA, KernSmooth, stats, utils
CompQuadForm, ggplot2, graphics, GSA, KernSmooth, stats,
statmod, utils
CompQuadForm, ggplot2, graphics, GSA, KernSmooth, parallel,
pbapply, stats, statmod, utils
ggplot2, stats, utils, graphics, truncnorm, mvtnorm,
gridExtra, reshape
ggplot2, stats, utils, graphics, truncnorm, mvtnorm,
gridExtra, reshape, Rcpp (>= 1.0.6)
ggplot2, stats, utils, truncnorm, mvtnorm, gridExtra, reshape,
Rcpp
ggplot2, stats, utils, truncnorm, mvtnorm, gridExtra, reshape,
reshape2, xtable, Rcpp, knitr
eRm, numDeriv, graphics, grDevices, stats, methods, MASS,
splines, Matrix, lattice
eRm, psychotools, ltm, numDeriv, graphics, grDevices, stats,
methods, MASS, splines, Matrix, lattice, colorspace, psych
DBI, RMySQL, RSQLite, numDeriv, RColorBrewer, utils, stats,
methods, graphics, grDevices
DBI, RMySQL, numDeriv, RColorBrewer, utils, stats, methods,
graphics, grDevices, sqldf
data.table (>= 1.9.4), DBI, RMySQL, numDeriv, RColorBrewer,
utils, stats, methods, graphics, grDevices, sqldf
data.table (>= 1.9.4), DBI, RMariaDB, numDeriv, RColorBrewer,
utils, stats, methods, graphics, grDevices, sqldf
data.table (>= 1.9.4), DBI, RMariaDB, numDeriv, RColorBrewer,
utils, stats, methods, graphics, grDevices, sqldf, dplyr,
tidyr, plotly, tcplfit2, ggplot2, gridExtra, stringr
stats, future, methods, numDeriv, RColorBrewer, future.apply,
stringr, stringi
stats, future, methods, numDeriv, RColorBrewer, future.apply,
stringr
shiny,shinyAce,shinythemes,shinydashboard,miniUI,
htmlwidgets,DT,metricsgraphics,leaflet,threejs,d3heatmap,
plotly,dygraphs,networkD3,d3Network,diagram,DiagrammeR,visNetwork,
needs,actuar,markdown,stats,knitr,data.table,Rcpp (>= 0.12.11),
rprojroot,R.utils,utils,devtools,graphics,scales,yaml,magrittr
shinyAce,shinythemes,shinydashboard,miniUI,radarchart,dplyr,
DT,metricsgraphics,leaflet,threejs,d3heatmap,tidyr,datasets,
plotly,dygraphs,networkD3,d3Network,diagram,DiagrammeR,visNetwork,
actuar,markdown,stats,knitr,data.table,Rcpp (>= 0.12.11),
rprojroot,utils,devtools,graphics,scales,yaml,magrittr,ggplot2
shinyAce,shinythemes,shinydashboard,miniUI,radarchart,dplyr,
DT,metricsgraphics,leaflet,threejs,d3heatmap,tidyr,datasets,
plotly,dygraphs,networkD3,diagram,DiagrammeR,visNetwork,
actuar,markdown,stats,knitr,data.table,Rcpp (>= 0.12.14),
rprojroot,utils,devtools,graphics,scales,yaml,magrittr,ggplot2,
RcppNumerical
shiny, pacman, shinythemes, shinydashboard, dplyr, DT,
datasets, actuar, markdown, stats, knitr, data.table, Rcpp (>=
0.12.14), rprojroot, utils, devtools, graphics, scales, yaml,
magrittr, ggplot2, RcppNumerical, miniUI
party, glmnet, Rdpack, rpart, stringr, SuperLearner,
randomForestSRC, earth
abind, coda, cowplot, doRNG, dplyr, fields, itertools,
mvtnorm, raster, scoringRules, stringr, foreach, ggplot2,
gtable, reshape2, scales, sp, SDMTools
abind, coda, cowplot, dplyr, fields, itertools, mvtnorm,
raster, scoringRules, stringr, foreach, ggplot2, gtable,
reshape2, scales, sp
curl, httpuv, httr, jsonlite, openssl, R6
dplyr (>= 1.0.0), fs, gstat, lubridate, magrittr, purrr,
raster, Rcpp, rlang, sf, sp, stringr, sys, tidyr (>= 1.0.0),
tidyselect
data.table, dplyr (>= 1.0.0), fs, gstat, magrittr, purrr,
raster, Rcpp, rlang, sf, sp, stringr, sys, tidyr (>= 1.0.0),
tidyselect
graphics, stats, nlme, broom, dplyr, rootSolve, tidyr,
minpack.lm, AICcmodavg, numDeriv
graphics, stats, broom, dplyr, rootSolve, minpack.lm,
AICcmodavg, numDeriv
abind, ciftiTools (>= 0.8.0), excursions, fMRIscrub, ica,
Matrix, matrixStats, methods, pesel, SQUAREM, stats
doParallel (>= 1.0.10), foreach (>= 1.4.3), parallel (>=
3.0.2), pls (>= 2.5.0), grDevices, graphics, stats, utils
Rcpp (>= 0.12.3), tensor, tsBSS, ICtest, ggplot2
Rcpp (>= 0.12.3), tensor, tsBSS, ICtest, ggplot2, abind
methods, stats, MASS, abind, Matrix, pracma, graphics
utils, reticulate (>= 0.8), yaml, jsonlite
utils, reticulate (>= 0.9), yaml, jsonlite, processx
config, jsonlite (>= 1.2), processx, reticulate (>= 1.10),
tfruns (>= 1.0), utils, yaml, rstudioapi (>= 0.7)
config, jsonlite, processx, reticulate (>= 1.1), tfruns (>=
0.9.1), utils, yaml
config, jsonlite, processx, reticulate (>= 1.0), tfruns,
utils, yaml
config, jsonlite (>= 1.2), processx, reticulate (>= 1.3),
tfruns (>= 0.9.1), utils, yaml, rstudioapi (>= 0.7)
config, jsonlite (>= 1.2), processx, reticulate (>= 1.3),
tfruns (>= 1.0), utils, yaml, rstudioapi (>= 0.7)
config, jsonlite, processx, reticulate (>= 1.2), tfruns (>=
0.9.1), utils, yaml
config, jsonlite (>= 1.2), processx, reticulate (>= 1.4),
tfruns (>= 1.0), utils, yaml, rstudioapi (>= 0.7)
config, jsonlite (>= 1.2), processx, reticulate (>= 1.5),
tfruns (>= 1.0), utils, yaml, rstudioapi (>= 0.7)
config, processx, reticulate (>= 1.10), tfruns (>= 1.0),
utils, yaml, tfautograph (>= 0.3), rstudioapi (>= 0.7)
config, processx, reticulate (>= 1.10), tfruns (>= 1.0),
utils, yaml, tfautograph (>= 0.3.1), rstudioapi (>= 0.7)
config, processx, reticulate (>= 1.24), tfruns (>= 1.0),
utils, yaml, tfautograph (>= 0.3.1), rstudioapi (>= 0.7)
config, processx, reticulate (>= 1.24), tfruns (>= 1.0),
utils, yaml, grDevices, tfautograph (>= 0.3.1), rstudioapi (>=
0.7)
assertive.base, assertive.properties, assertive.types, Matrix,
methods, purrr
fields, glmnet, rgl, reshape, mvtnorm, HDCI, clues, parallel,
RColorBrewer, viridis, rTensor, methods
fields, glmnet, rgl, reshape, mvtnorm, HDCI, parallel,
RColorBrewer, viridis, methods, stats, utils
robustbase (>= 0.9-10), coda, nlme, MASS
robustbase (>= 0.9-10), coda, nlme, MASS, statnet.common (>=
4.1.0)
statnet.common (>= 4.4.0), network (>= 1.17.0), Rcpp, tibble,
methods
statnet.common (>= 4.4.0), network (>= 1.17.0), networkDynamic
(>= 0.11.0), Rcpp, tibble, methods
chk, extras (>= 0.0.1), lifecycle, rlang, universals, vctrs
chk, extras, lifecycle, rlang, purrr, universals, vctrs (>=
0.3.0)
chk, extras, lifecycle, purrr, rlang, universals, vctrs
chk (>= 0.7.0), extras, lifecycle, purrr, rlang, universals,
vctrs
chk (>= 0.8.1), extras, lifecycle, purrr, rlang, universals,
vctrs
lmtest, Rcpp (>= 0.10.6), rgl, sandwich, urca, zoo
quadprog, maps, dichromat, grid, stats, graphics, grDevices
base64enc, httr, raster, magick (>= 2.5.0), gdalUtils,
methods, png, sf, units, grDevices, ggplot2
base64enc, httr, raster, magick (>= 2.5.0), gdalUtils,
methods, png, sf (>= 1.0-5), units, grDevices, ggplot2
base64enc, httr, raster, rgdal, magick (>= 2.5.0), methods,
png, sf (>= 1.0-5), units, grDevices, ggplot2
base64enc, ggplot2, grDevices, httr, magick (>= 2.5.0),
methods, png, sf (>= 1.0-5), terra, unifir, units
base64enc, ggplot2, glue, grDevices, httr, magick (>= 2.5.0),
methods, png, raster (>= 3.5-19), rlang, sf (>= 1.0-5), terra,
unifir, units
hash, rgl, randomcoloR, utils, R6, sets, cxhull, graphics,
scales, english
hash, rgl, randomcoloR, utils, R6, sets, cxhull, graphics,
scales, english, interp, Rvcg
Rcpp (>= 0.12.12), curl, rappdirs, digest
Rcpp (>= 0.12.12), xml2, stringr, curl, rappdirs, digest
Rcpp (>= 0.12.12), pdftools (>= 1.5), curl, rappdirs, tibble,
digest
Rcpp (>= 0.12.12), pdftools (>= 1.5), curl, rappdirs, digest
boot, utils, microbenchmark, bench, ggplot2, stats, testthat
(>= 2.1.0)
magrittr, ggplot2, reshape2, plyr, methods, stats, dplyr
stats, assertthat, ggplot2, scales, reshape2, forcats, knitr,
methods
stats, ggplot2, scales, reshape2, forcats, knitr, methods
dplyr (>= 0.8.0), glue, lifecycle, rlang, stringr, tidyselect
assertthat, methods, parsetools, pkgcond, postlogic, purrr,
rlang, stringi, testthat, utils
digest, stringr (>= 0.4), mutatr, evaluate (>= 0.3)
digest, stringr (>= 0.4), evaluate (>= 0.3), methods
digest, stringr (>= 0.4), evaluate (>= 0.4.3)
digest, stringr (>= 0.4), evaluate (>= 0.3)
digest, crayon, praise, magrittr, R6, methods
cli, crayon, digest, magrittr, methods, praise, R6 (>= 2.2.0),
rlang, withr (>= 2.0.0)
cli, crayon (>= 1.3.4), digest, magrittr, methods, praise, R6
(>= 2.2.0), rlang (>= 0.3.0), withr (>= 2.0.0)
cli, crayon (>= 1.3.4), digest, evaluate, magrittr, methods,
praise, R6 (>= 2.2.0), rlang (>= 0.3.0), withr (>= 2.0.0)
cli, crayon (>= 1.3.4), digest, ellipsis, evaluate, magrittr,
methods, pkgload, praise, R6 (>= 2.2.0), rlang (>= 0.4.1),
withr (>= 2.0.0)
brio, callr (>= 3.5.1), cli, crayon (>= 1.3.4), desc, digest,
ellipsis (>= 0.2.0), evaluate, jsonlite, lifecycle, magrittr,
methods, pkgload, praise, processx, ps (>= 1.3.4), R6 (>=
2.2.0), rlang (>= 0.4.1), utils, waldo (>= 0.2.1), withr (>=
2.0.0)
brio, callr (>= 3.5.1), cli (>= 2.2.0), crayon (>= 1.3.4),
desc, digest, ellipsis (>= 0.2.0), evaluate, jsonlite,
lifecycle, magrittr, methods, pkgload, praise, processx, ps (>=
1.3.4), R6 (>= 2.2.0), rlang (>= 0.4.9), utils, waldo (>=
0.2.1), withr (>= 2.3.0)
brio, callr (>= 3.5.1), cli (>= 2.2.0), crayon (>= 1.3.4),
desc, digest, ellipsis (>= 0.2.0), evaluate, jsonlite,
lifecycle, magrittr, methods, pkgload, praise, processx, ps (>=
1.3.4), R6 (>= 2.2.0), rlang (>= 0.4.9), utils, waldo (>=
0.2.4), withr (>= 2.3.0)
brio, callr (>= 3.5.1), cli (>= 2.2.0), crayon (>= 1.3.4),
desc, digest, ellipsis (>= 0.2.0), evaluate, jsonlite,
lifecycle, magrittr, methods, pkgload, praise, processx, ps (>=
1.3.4), R6 (>= 2.2.0), rlang (>= 0.4.9), utils, waldo (>=
0.2.4), withr (>= 2.4.3)
brio, callr (>= 3.5.1), cli (>= 3.1.1), crayon (>= 1.3.4),
desc, digest, ellipsis (>= 0.2.0), evaluate, jsonlite,
lifecycle, magrittr, methods, pkgload, praise, processx, ps (>=
1.3.4), R6 (>= 2.2.0), rlang (>= 1.0.1), utils, waldo (>=
0.3.1), withr (>= 2.4.3)
brio, callr (>= 3.5.1), cli (>= 3.3.0), crayon (>= 1.3.4),
desc, digest, ellipsis (>= 0.2.0), evaluate, jsonlite,
lifecycle, magrittr, methods, pkgload, praise, processx, ps (>=
1.3.4), R6 (>= 2.2.0), rlang (>= 1.0.1), utils, waldo (>=
0.4.0), withr (>= 2.4.3)
brio, callr (>= 3.5.1), cli (>= 3.4.0), desc, digest, ellipsis
(>= 0.2.0), evaluate, jsonlite, lifecycle, magrittr, methods,
pkgload, praise, processx, ps (>= 1.3.4), R6 (>= 2.2.0), rlang
(>= 1.0.1), utils, waldo (>= 0.4.0), withr (>= 2.4.3)
assertthat, devtools, usethis (>= 0.1.0), testthat, stringi,
magrittr, utils, stats, rprojroot, tools
assertthat, devtools, usethis (>= 0.1.0), testthat, stringi,
magrittr, utils, stats, tools, pkgload
assertthat, devtools, usethis (>= 0.1.0), testthat, stringi,
magrittr, utils, stats, tools, pkgload, rprojroot, fs
assertthat, devtools, fs, magrittr, pkgload, rprojroot, stats,
stringi, testthat, tools, usethis (>= 0.1.0), utils
ggplot2, reshape2, tidyr, FactoMineR, magrittr, tibble,
ggrepel, dplyr
magrittr (>= 1.0.1), xtable, rstudioapi, magick, xml2,
svgPanZoom
rstudioapi,magick,svgPanZoom,utils,xml2, htmltools, base64enc,
whisker, rematch2
base64enc, details, fs, htmltools, knitr, lifecycle, magick,
magrittr, rematch2, rstudioapi, svgPanZoom, utils, whisker,
xml2
base64enc, fs, htmltools, knitr, lifecycle, magick, magrittr,
rematch2, rstudioapi, svgPanZoom, utils, whisker, xml2
base64enc, details, fs, htmltools, knitr, magick, rematch2,
rstudioapi, svgPanZoom, utils, whisker, xml2, tinytex
dplyr, tokenizers, tibble, stringr, tidyr, ggplot2, ggrepel,
cowplot, rlang, purrr, magrittr, parsnip, recipes, rsample,
reticulate, tune, workflows, yardstick, future, furrr
dplyr, tibble, stringi, tidyr, ggplot2, ggrepel, cowplot,
rlang, purrr, magrittr, parsnip, recipes, rsample, reticulate,
tune, workflows, yardstick, future, furrr, overlapping
tibble, Matrix, text2vec, parallel, doParallel, foreach,
stringr, stringi, dplyr, kit, fastmatch, mlpack, methods,
qgraph (>= 1.6.9), igraph (>= 1.2.6), magrittr, rlang
text2vec, parallel, doParallel, foreach, stringr, stringi,
dplyr, kit, fastmatch, methods, qgraph (>= 1.6.9), igraph (>=
1.2.6), magrittr, rlang, ClusterR, tibble
text2vec, parallel, doParallel, foreach, stringr, stringi,
dplyr, kit, fastmatch, methods, qgraph (>= 1.6.9), igraph (>=
1.2.6), magrittr, rlang, ClusterR, tibble, rsvd
magrittr, dplyr, corpustools (>= 0.4.2), tidyr, tibble,
stringr, ggplot2
magrittr, dplyr, corpustools (>= 0.4.2), tidyr, tibble,
stringr, ggplot2, lifecycle
aws.signature, dplyr, googleAuthR, googleLanguageR, httr,
mscstts (>= 0.5.1), tuneR, magrittr, knitr, utils
aws.polly, aws.signature, dplyr, googleAuthR, googleLanguageR,
httr, mscstts (>= 0.5.1), tuneR, magrittr
Rcpp (>= 0.12.10), R6, data.table, utils
english(>= 1.0-2), qdapRegex, stringi, textshape(>= 1.0.1),
utils
english(>= 1.0-2), lexicon (>= 0.6.2), qdapRegex, stringi,
textshape(>= 1.0.1), utils
data.table, english(>= 1.0-2), lexicon (>= 0.7.4), qdapRegex,
stringi, textshape(>= 1.0.1), utils
data.table, english(>= 1.0-2), glue, lexicon (>= 0.7.4), mgsub
(>= 1.5.0), qdapRegex, stringi, textshape(>= 1.0.1), utils
data.table, english(>= 1.0-2), glue, lexicon (>= 1.0.0), mgsub
(>= 1.5.0), qdapRegex, stringi, textshape(>= 1.0.1), utils
data.table, english(>= 1.0-2), glue (>= 1.3.0), lexicon (>=
1.0.0), mgsub (>= 1.5.0), qdapRegex, stringi, textshape(>=
1.0.1), utils
dplyr, plyr, ggplot2, magrittr, stringr, purrr, stopwords,
textdata, tidytext
dplyr, plyr, ggplot2, magrittr, stringr, purrr, stopwords,
textdata, tidytext, tidyr
dplyr, purrr, rlang, syuzhet, tibble, magrittr, tokenizers,
utils, stats
dplyr, purrr, rlang, syuzhet, text2vec, tfse, tibble,
tokenizers, utils, stats
dplyr, purrr, rlang, text2vec, tfse, tibble, tokenizers,
utils, stats
lda, parallel, tm, RWeka, Rcpp, RcppProgress
lda, parallel, tm, topicmodels, RWeka, Rcpp, RcppProgress,
irlba
lda, parallel, topicmodels, text2vec (>= 0.3), tm, stringr,
SnowballC, Rcpp, RcppProgress, irlba
methods, lda, parallel, topicmodels, text2vec (>= 0.3), tm,
stringr, SnowballC, Rcpp, RcppProgress, RSpectra
methods, lda, parallel, topicmodels, text2vec (>= 0.4), tm,
stringr, SnowballC, Rcpp, RcppProgress, RSpectra
methods, lda, parallel, topicmodels, text2vec (>= 0.5), tm,
stringr, SnowballC, Rcpp (>= 0.12.12), RcppProgress, RSpectra
methods, lda, parallel, text2vec (>= 0.5), tm, stringr,
SnowballC, Rcpp (>= 0.12.12), RcppProgress, RSpectra
methods, parallel, text2vec (>= 0.5), stopwords, stringr,
Rcpp, RcppProgress, RSpectra
gtools, magrittr, methods, parallel, text2vec (>= 0.5),
stopwords, stringr, Rcpp, RcppProgress, RSpectra
gtools, magrittr, methods, parallel, text2vec (>= 0.5),
stopwords, stringr, Rcpp, RcppProgress, RSpectra, utils
mallet, rJava, networkD3, wordcloud, dplyr, koRpus,
topicmodels, slam, methods, SnowballC
utils, methods, lattice, stats, Matrix, igraph, graphics,
data.table (>= 1.9.6)
utils, methods, lattice, stats, Matrix, graphics, data.table
(>= 1.9.6)
utils, data.table (>= 1.9.6), igraph, digest
curl, pdftools, readxl, textshape, tools, utils, XML
antiword, curl, pdftools, readxl, rvest, textshape, tools,
utils, xml2
antiword, curl, data.table, pdftools, readxl, rvest, striprtf,
textshape, tools, utils, xml2
antiword, curl, data.table, pdftools, readxl, rvest, striprtf,
tesseract, textshape, tools, utils, xml2
generics, rlang, tokenizers, dplyr, tibble, purrr, SnowballC,
stopwords, magrittr, stringr, text2vec
generics, rlang, tokenizers, dplyr, tibble, purrr, SnowballC,
stopwords, magrittr, stringr, text2vec, textfeatures (>=
0.3.3), lifecycle
generics, rlang, tokenizers, dplyr, tibble, tidyr, purrr,
SnowballC, stopwords, magrittr, Matrix, stringr
dials, generics, rlang, tokenizers, dplyr, tibble, tidyr,
purrr, SnowballC, stopwords, magrittr, Matrix, stringr, vctrs,
Rcpp, modeldata
generics, rlang, tokenizers, dplyr, tibble, tidyr, purrr,
SnowballC, stopwords, magrittr, Matrix, stringr, vctrs, Rcpp
dplyr, generics, magrittr, Matrix, purrr, Rcpp, rlang,
SnowballC, stringr, tibble, tidyr, tokenizers, vctrs
dplyr, generics (>= 0.1.0), magrittr, Matrix, purrr, Rcpp,
rlang, SnowballC, stringr, tibble, tidyr, tokenizers, vctrs
dplyr, generics (>= 0.1.0), magrittr, Matrix, purrr, Rcpp,
rlang, SnowballC, tibble, tidyr, tokenizers, vctrs
lifecycle, dplyr, generics (>= 0.1.0), magrittr, Matrix,
purrr, Rcpp, rlang, SnowballC, tibble, tidyr, tokenizers,
vctrs, glue
lifecycle, dplyr, generics (>= 0.1.0), magrittr, Matrix,
purrr, Rcpp, rlang, SnowballC, tibble, tokenizers, vctrs, glue
dplyr, hunspell, koRpus, lexicon (>= 0.1.1), quanteda,
SnowballC, textshape, utils
dplyr, hunspell, koRpus (>= 0.10-2), lexicon (>= 0.4.1),
quanteda (>= 0.99.12), SnowballC, stats, stringi, textclean,
textshape, utils
dplyr, hunspell, koRpus, lexicon (>= 0.4.1), quanteda (>=
0.99.12), SnowballC, stats, stringi, textclean, textshape,
utils
reticulate, tensorflow, rstudioapi, keras, purrr
reticulate (>= 1.10), tensorflow (>= 1.13.1), magrittr, rlang,
tidyselect, stats
reticulate (>= 1.3), tensorflow (>= 1.4.1), magrittr, rlang,
tidyselect, stats
reticulate (>= 1.10), tensorflow (>= 1.9), magrittr, rlang,
tidyselect, stats
reticulate (>= 1.10), tensorflow (>= 1.13.1), magrittr, rlang,
tidyselect, stats, generics, tfestimators
reticulate (>= 1.10), tensorflow (>= 1.13.1), magrittr, rlang,
tidyselect, stats, generics, vctrs
httpuv, httr, jsonlite, magrittr, reticulate, swagger,
tensorflow
magrittr, progress, reticulate (>= 1.3.1), rlang, tensorflow
(>= 1.4.2), tfruns (>= 1.1), tidyselect, utils, purrr, tibble,
tidyr
magrittr, progress, reticulate (>= 1.10), rlang, tensorflow
(>= 1.9), tfruns (>= 1.1), tidyselect, utils, purrr, tibble,
tidyr
forge, magrittr, progress, reticulate (>= 1.10), rlang (>=
0.3), tensorflow (>= 1.9), tfruns (>= 1.1), tidyselect, utils,
purrr, tibble, tidyr
reticulate (>= 1.9.0.9002), tensorflow (>= 1.8.0.9006),
magrittr, rstudioapi (>= 0.7)
reticulate (>= 1.9.0.9002), tensorflow (>= 1.8.0.9006),
magrittr, rstudioapi (>= 0.7), vctrs
reticulate (>= 1.10), tensorflow (>= 1.9), tfdatasets (>=
1.9), forge, magrittr
tensorflow (>= 2.1.0), reticulate, keras, magrittr
tensorflow (>= 2.2.0), reticulate, keras, magrittr
tensorflow (>= 2.4.0), reticulate, keras, magrittr
tensorflow (>= 2.0.0), reticulate, keras, magrittr
stats, utils, graphics, methods, timeSeries
utils, jsonlite, yaml, config, magrittr, tibble
utils, jsonlite, base64enc, yaml, config, magrittr, tibble,
whisker, tidyselect, rlang, rstudioapi (>= 0.7), reticulate
utils, jsonlite (>= 1.2), base64enc, yaml, config, magrittr,
tibble, whisker, tidyselect, rlang, rstudioapi (>= 0.7),
reticulate
utils, jsonlite (>= 1.2), base64enc, yaml, config, magrittr,
whisker, tidyselect, rlang, rstudioapi (>= 0.7), reticulate
rlang, stats, dplyr, ggplot2, tidyr, reshape2, scales, tibble,
purrr, broom, tsibble, fabletools, tsfeatures, feasts,
Rcatch22, reticulate, Rtsne, R.matlab, plotly, caret, janitor
utils, graphics, grDevices, grid, farver, rlang, scales,
rstudioapi (>= 0.8), rappdirs, ggplot2 (>= 3.3.0)
tibble, purrr, withr, generics, dplyr, rlang, tidyselect (>=
0.2.5), ROSE, unbalanced, RANN, dials
dials, dplyr, generics, purrr, RANN, rlang, ROSE, tibble,
unbalanced, withr
dplyr, generics, purrr, RANN, rlang, ROSE, tibble, unbalanced,
withr
dplyr, generics (>= 0.1.0), purrr, RANN, rlang, ROSE, tibble,
unbalanced, withr
gower, lifecycle, dplyr, generics (>= 0.1.0), purrr, RANN,
rlang, ROSE, tibble, unbalanced, withr, glue
gower, lifecycle, dplyr, generics (>= 0.1.0), purrr, RANN,
rlang, ROSE, tibble, withr, glue
gower, lifecycle, dplyr, generics (>= 0.1.0), purrr, RANN,
rlang, ROSE, tibble, withr, glue, hardhat
dplyr, ggplot2 (>= 2.2.1), gridExtra, magrittr (>= 1.5),
parallel (>= 3.4.1), phyloseq (>= 1.20.0), ShortRead (>=
1.34.0), splancs, tidyverse (>= 1.1.1), tidyr, vegan (>=
2.3.5), viridis (>= 0.4.0)
ggplot2 (>= 1.0.1), dplyr, tidyverse, usethis, gridExtra,
MASS, magrittr, grDevices, readr
rcbalance, stats, liqueueR, plyr, mvnfast, methods, DiPs
rcbalance, stats, MASS, plyr,methods, DiPs
lazyeval, ggplot2, assertthat, ReporteRs, stringi, stringr,
tidyr, magrittr, dplyr, lubridate, XLConnect, devtools
assertthat, devtools, dplyr, ggplot2, lazyeval, lubridate,
magrittr, officer, stats, stringi, stringr, tidyr, utils, rvg
assertthat, crayon, devtools, dplyr, ggplot2, lazyeval,
lubridate, magrittr, officer, purrr, readr, rvg, stats,
stringi, stringr, tidyr, utils
assertthat, cli, devtools, dplyr, ggplot2, lazyeval,
lubridate, magrittr, methods, officer, rvg, stats, stringi,
stringr, tidyr, utils, withr
methods, grDevices, graphics, shiny, rlang, future, crayon (>=
1.3.4), base64enc (>= 0.1-3), htmltools (>= 0.3.6), jsonlite
(>= 1.5), stringr (>= 1.3.1), htmlwidgets (>= 1.3), R6 (>=
2.3.0)
grDevices, graphics, dipsaus, xml2, shiny (>= 1.2.0), digest
(>= 0.6.22), freesurferformats (>= 0.1.7), jsonlite (>= 1.5),
stringr (>= 1.3.1), htmlwidgets (>= 1.3), R6 (>= 2.3.0), gifti
(>= 0.7.5), oro.nifti (>= 0.9.1)
utils, grDevices, graphics, dipsaus, xml2, shiny (>= 1.2.0),
digest (>= 0.6.22), freesurferformats (>= 0.1.7), jsonlite (>=
1.5), stringr (>= 1.3.1), htmlwidgets (>= 1.3), R6 (>= 2.3.0),
gifti (>= 0.7.5), oro.nifti (>= 0.9.1)
htmlwidgets (>= 0.3.2), base64enc, Matrix, stats, methods,
jsonlite
htmlwidgets (>= 0.3.2), base64enc, crosstalk, methods, stats
dplyr, httr, readxl, readr, jsonlite, purrr, janitor, tidyr,
tidyselect, anytime, tibble, curl
graphics, methods, revdbayes (>= 1.2.0), rust (>= 1.2.2),
stats
graphics, methods, revdbayes (>= 1.3.4), rust (>= 1.2.2),
stats
Rcpp (>= 0.12.9.4), climate, dplyr, aiRthermo
rstan (>= 2.17.3), rstantools (>= 1.5.0), lavaan (>= 0.6-1),
MplusAutomation, dplyr (>= 0.6.0), tibble (>= 1.3.1), tidyr,
magrittr, mvtnorm, utils, stats, rlang, knitr
dplyr (>= 0.6.0), knitr, lavaan (>= 0.6-1), magrittr,
MplusAutomation, mvtnorm, RcppParallel (>= 5.0.1), rlang, rstan
(>= 2.18.1), rstantools (>= 2.1.1), stats, tibble (>= 1.3.1),
tidyr, utils
rstan (>= 2.17.3), rstantools (>= 1.5.0), lavaan (>= 0.6-1),
MplusAutomation, dplyr (>= 0.6.0), tibble (>= 1.3.1), tidyr,
magrittr, mvtnorm, utils, stats, rlang
methods, assertthat, utils, lazyeval (>= 0.1.10), Rcpp
methods, utils, lazyeval (>= 0.1.10), Rcpp (>= 0.12.3)
assertthat, methods, rlang, Rcpp (>= 0.12.3), utils
cli, crayon, methods, pillar (>= 1.1.0), rlang, utils
cli, crayon (>= 1.3.4), fansi (>= 0.4.0), methods, pillar (>=
1.3.1), pkgconfig, rlang (>= 0.3.0), utils
cli, crayon (>= 1.3.4), ellipsis (>= 0.2.0), fansi (>= 0.4.0),
lifecycle (>= 0.2.0), magrittr, methods, pillar (>= 1.4.3),
pkgconfig, rlang (>= 0.4.3), utils, vctrs (>= 0.2.4)
cli, crayon (>= 1.3.4), ellipsis (>= 0.2.0), fansi (>= 0.4.0),
lifecycle (>= 0.2.0), magrittr, methods, pillar (>= 1.4.3),
pkgconfig, rlang (>= 0.4.3), utils, vctrs (>= 0.3.2)
ellipsis (>= 0.2.0), fansi (>= 0.4.0), lifecycle (>= 0.2.0),
magrittr, methods, pillar (>= 1.5.0), pkgconfig, rlang (>=
0.4.3), utils, vctrs (>= 0.3.2)
ellipsis (>= 0.2.0), fansi (>= 0.4.0), lifecycle (>= 0.2.0),
magrittr, methods, pillar (>= 1.6.0), pkgconfig, rlang (>=
0.4.3), utils, vctrs (>= 0.3.2)
ellipsis (>= 0.3.2), fansi (>= 0.4.0), lifecycle (>= 0.2.0),
magrittr, methods, pillar (>= 1.6.0), pkgconfig, rlang (>=
0.4.3), utils, vctrs (>= 0.3.8)
ellipsis (>= 0.3.2), fansi (>= 0.4.0), lifecycle (>= 0.2.0),
magrittr, methods, pillar (>= 1.6.2), pkgconfig, rlang (>=
0.4.3), utils, vctrs (>= 0.3.8)
ellipsis (>= 0.3.2), fansi (>= 0.4.0), lifecycle (>= 1.0.0),
magrittr, methods, pillar (>= 1.6.2), pkgconfig, rlang (>=
0.4.3), utils, vctrs (>= 0.3.8)
ellipsis (>= 0.3.2), fansi (>= 0.4.0), lifecycle (>= 1.0.0),
magrittr, methods, pillar (>= 1.7.0), pkgconfig, rlang (>=
1.0.1), utils, vctrs (>= 0.3.8)
fansi (>= 0.4.0), lifecycle (>= 1.0.0), magrittr, methods,
pillar (>= 1.7.0), pkgconfig, rlang (>= 1.0.2), utils, vctrs
(>= 0.3.8)
tibble (>= 2.1.3), knitr (>= 1.23), officer, flextable,
kableExtra, forcats, labelled, tidyr (>= 1.0.0), tidyselect,
stringr, rlang, vctrs, purrr, glue, stats, magrittr, dplyr,
lifecycle
assertthat, dplyr (>= 0.7), lubridate, magrittr, purrr, rlang,
stringr, tibble, tidyr (>= 0.7.1)
BayesFactor, broomExtra, dplyr, ipmisc, metaBMA, rlang,
tibble, tidyr
BayesFactor, dplyr, ipmisc, metaBMA, rlang, tidyr
BayesFactor, dplyr, ipmisc (>= 3.1.0), metaBMA, rlang, tidyr
broomExtra, BayesFactor, dplyr, ipmisc, metaBMA, rlang, tidyr
BayesFactor, dplyr, effectsize (>= 0.4.0), insight (>=
0.10.0), ipmisc (>= 4.1.0), lme4, metaBMA (>= 0.6.5),
parameters (>= 0.9.0), performance (>= 0.5.1), rlang, tidyr
BayesFactor, dplyr, effectsize, insight (>= 0.11.0), ipmisc,
metaBMA (>= 0.6.5), parameters (>= 0.10.0), performance (>=
0.6.0), rlang, tidyr
BayesFactor, dplyr, effectsize (>= 0.4.3), insight (>=
0.12.0), ipmisc (>= 5.0.2), metaBMA (>= 0.6.6), parameters (>=
0.11.0), performance, rlang, tidyr
BayesFactor, dplyr, effectsize (>= 0.4.3), insight (>=
0.13.0), ipmisc (>= 5.0.2), metaBMA (>= 0.6.6), parameters (>=
0.12.0), performance, rlang, tidyr
BayesFactor, dplyr, effectsize (>= 0.4.5), insight (>=
0.14.0), ipmisc (>= 5.0.2), metaBMA (>= 0.6.6), parameters (>=
0.14.0), performance, rlang, tidyr
cicerone, config, dplyr, DT, GGally, ggcorrplot, ggplot2,
glue, golem, gt, haven, IDEAFilter, plotly, purrr, rlang,
rmarkdown, shiny, shinyjs, shinyWidgets, sjlabelled, stringr,
survival, tidyr, timevis, tippy (== 0.1.0)
dplyr, emoji, purrr, stringr, tibble, tidyr, utils
dplyr, magrittr, tidyr, rlang, purrr, stats, viridis,
circlize, RColorBrewer, grid, grDevices, utils, lifecycle
dplyr, magrittr, tidyr, rlang, purrr, stats, viridis,
circlize, RColorBrewer, grid, grDevices, utils
methods, stats, utils, dplyr (>= 0.8.5), magrittr (>= 1.5),
tidyr (>= 1.0.3), rlang (>= 0.4.5), purrr (>= 0.3.3), viridis
(>= 0.5.1), circlize (>= 0.4.8), RColorBrewer (>= 1.1), grid,
grDevices, lifecycle (>= 0.2.0)
methods, stats, utils, dplyr (>= 0.8.5), magrittr (>= 1.5),
tidyr (>= 1.0.3), rlang (>= 0.4.5), purrr (>= 0.3.3),
ComplexHeatmap (>= 2.2.0), viridis (>= 0.5.1), circlize (>=
0.4.8), RColorBrewer (>= 1.1), grid, grDevices, lifecycle (>=
0.2.0)
methods, stats, utils, dplyr (>= 0.8.5), magrittr (>= 1.5),
tidyr (>= 1.0.3), rlang (>= 0.4.5), purrr (>= 0.3.3), tibble,
ComplexHeatmap (>= 2.2.0), viridis (>= 0.5.1), circlize (>=
0.4.8), RColorBrewer (>= 1.1), grid, grDevices, lifecycle (>=
0.2.0)
methods, stats, utils, dplyr (>= 0.8.5), magrittr (>= 1.5),
tidyr (>= 1.0.3), rlang (>= 0.4.5), purrr (>= 0.3.3), tibble,
ComplexHeatmap (>= 2.2.0), viridis (>= 0.5.1), circlize (>=
0.4.8), RColorBrewer (>= 1.1), grid, grDevices, lifecycle (>=
0.2.0), dendextend
methods, stats, utils, dplyr (>= 0.8.5), magrittr (>= 1.5),
tidyr (>= 1.0.3), rlang (>= 0.4.5), purrr (>= 0.3.3), tibble,
ComplexHeatmap (>= 2.2.0), viridis (>= 0.5.1), circlize (>=
0.4.8), RColorBrewer (>= 1.1), grid, grDevices, lifecycle (>=
0.2.0), dendextend, patchwork
dplyr, forcats, ggplot2, magrittr, mclust, purrr, readr,
rlang, stringr, tibble, tidyr
dplyr, ggplot2, mclust, methods, mix, MplusAutomation, tibble
dplyr, ggplot2, gtable, grid, mclust, methods, mix,
MplusAutomation, tibble
purrr, stringr, tibble, magrittr, dplyr, janitor, tidyr, rlang
cli, dplyr, janitor, labelVector, magrittr, purrr, REDCapR,
rlang, stringr, tibble, tidyr, tidyselect
ggplot2, OpenMx, lavaan, MplusAutomation, igraph, psych,
methods
ggplot2, lavaan, MplusAutomation, igraph, psych
ggplot2, lavaan, MplusAutomation, igraph, psych, methods,
gtable
ggplot2, lavaan, blavaan, MplusAutomation, igraph, psych,
methods, gtable
dplyr, ggplot2, jsonlite, magrittr, nlme, rgdal, rgeos, sf,
tigris
curl, dplyr, fuzzyjoin, ggplot2, jsonlite, keyring, magrittr,
nlme, rgdal, sf, tigris
curl, dplyr, fuzzyjoin, ggplot2, jsonlite, keyring, magrittr,
nlme, rgdal, sf, stringi, tigris, usethis
curl, dplyr, fuzzyjoin, ggplot2, jsonlite, keyring, magrittr,
nlme, rgdal, sf, stringi, tigris, usethis, crayon
crayon, curl, dplyr, fuzzyjoin, ggplot2, jsonlite, keyring,
magrittr, nlme, rgdal, sf, stringi, tigris, usethis
crayon, curl, dplyr, fuzzyjoin, ggplot2, jsonlite, keyring,
magrittr, nlme, rgdal, sf, stringi, tigris (>= 1.0), usethis
crayon, curl, dplyr, fuzzyjoin, ggplot2, jsonlite, keyring,
magrittr, nlme, rgdal, sf, stringi, tigris (>= 1.0), usethis,
httr, brio, waldo, diffobj, gitcreds
crayon, dplyr, fuzzyjoin, ggplot2, httr, jsonlite, magrittr,
purrr, sf, tigris (>= 1.0)
checkmate, crayon, dplyr, fuzzyjoin (>= 0.1.6), ggplot2, httr,
jsonlite, magrittr, sf, tigris (>= 1.0)
plyr, dplyr, tidyr, ggplot2 (>= 3.0.0), stringi, stringr,
LaplacesDemon, coda, purrr (>= 0.2.3), tibble, MASS, rlang,
ggstance, ggridges, grid, forcats, HDInterval, arrayhelpers,
tidyselect, magrittr
plyr, dplyr (>= 0.8.0), tidyr, ggplot2 (>= 3.0.0), stringi,
LaplacesDemon, coda, purrr (>= 0.2.3), rlang (>= 0.3.0),
ggstance, grid, forcats, HDInterval, arrayhelpers, tidyselect,
tibble, magrittr
plyr, dplyr (>= 0.8.0), tidyr, ggplot2 (>= 3.0.0), coda, purrr
(>= 0.2.3), rlang (>= 0.3.0), ggstance, grid, forcats,
HDInterval, arrayhelpers, tidyselect, tibble, magrittr
plyr, dplyr (>= 0.8.0), tidyr (>= 1.0.0), ggplot2 (>= 3.1.0),
coda, purrr (>= 0.2.3), rlang (>= 0.3.0), scales, grid,
forcats, HDInterval, arrayhelpers, tidyselect, tibble, magrittr
ggdist (>= 2.1.0), plyr, dplyr (>= 0.8.0), tidyr (>= 1.0.0),
ggplot2 (>= 3.3.0), coda, purrr (>= 0.2.3), rlang (>= 0.3.0),
scales, grid, forcats, HDInterval, arrayhelpers, tidyselect,
tibble, magrittr
ggdist (>= 2.3.0), plyr, dplyr (>= 0.8.0), tidyr (>= 1.0.0),
ggplot2 (>= 3.3.0), coda, purrr (>= 0.2.3), rlang (>= 0.3.0),
forcats, arrayhelpers, tidyselect, tibble, magrittr
methods, ggdist (>= 3.0.0), dplyr (>= 0.8.0), tidyr (>=
1.0.0), ggplot2 (>= 3.3.5), coda, rlang (>= 0.3.0),
arrayhelpers, tidyselect, tibble, magrittr, posterior (>=
1.0.1), withr, vctrs
magrittr, dplyr, stringr, tidyselect, purrr, janitor, tibble,
rlang, lubridate, stats, scales, ggplot2, rlist, OneR, strex,
ClusterR, framecleaner, xgboost, badger
magrittr, utils, tidyr, tibble, dplyr, stringr, stats, forcats
dplyr (>= 0.8.1), ggplot2, graphics, magrittr, methods, purrr
(>= 0.3.2), rlang, stats, stringr (>= 1.4.0), tibble, tidyr,
unpivotr (>= 0.5.1), utils
httr, sf, dplyr, tigris, stringr, jsonlite, purrr, rvest,
tidyr, rappdirs, readr, xml2, units
httr, sf, dplyr (>= 0.8.0), tigris, stringr, jsonlite (>=
1.5.0), purrr, rvest, tidyr (>= 1.0.0), rappdirs, readr, xml2,
units, utils, rlang
httr, sf, dplyr (>= 0.7.0), tigris, stringr, jsonlite, purrr,
rvest, tidyr (>= 0.7.0), rappdirs, readr, xml2, units, utils
httr, sf, dplyr (>= 0.7.0), tigris, stringr, jsonlite, purrr,
rvest, tidyr (>= 0.7.0), rappdirs, readr, xml2, units
httr, sf, dplyr (>= 0.7.0), tigris, stringr, jsonlite (>=
1.5.0), purrr, rvest, tidyr (>= 0.7.0), rappdirs, readr, xml2,
units, utils
httr, sf, dplyr (>= 1.0.0), tigris, stringr, jsonlite (>=
1.5.0), purrr, rvest, tidyr (>= 1.0.0), rappdirs, readr, xml2,
units, utils, rlang
httr, sf, dplyr (>= 1.0.0), tigris, stringr, jsonlite (>=
1.5.0), purrr, rvest, tidyr (>= 1.0.0), rappdirs, readr, xml2,
units, utils, rlang, crayon
httr, sf, dplyr (>= 1.0.0), tigris, stringr, jsonlite (>=
1.5.0), purrr, rvest, tidyr (>= 1.0.0), rappdirs, readr, xml2,
units, utils, rlang, crayon, tidyselect
magick, rsvg, rlang, testthat, dplyr, methods, graphics,
htmlwidgets, lubridate, stringr
magick, rsvg, rlang, testthat, methods, graphics, htmlwidgets,
lubridate, stringr
purrr, pryr, tibble, rlang, glue, matahari
broom, dplyr, forcats, glue, magrittr, MBESS, purrr, rlang,
stringr, tibble, tidyr, tidyselect
broom, dplyr, forcats, glue, magrittr, MBESS, purrr, rlang,
stringr, tibble, tidyr
jsonlite, yaml, dplyr, magrittr, visNetwork, htmlwidgets,
webshot
assertthat, dplyr, magrittr, purrr, tibble
assertthat, dplyr, ggplot2, magrittr, purrr, tibble
assertthat, dplyr, ggplot2, magrittr, purrr, stats, tibble
utils, grDevices, graphics, glue, dplyr, stats, rlang,
ggrepel, ggplot2
broom, crayon, dials, dplyr, furrr, magrittr, MASS, methods,
progressr, purrr, rlang, rsample, stats, tibble, tidyr, utils,
yardstick
data.table (>= 1.12.6), fst (>= 0.9.0), stringr, tibble
methods, lme4, stats, utils, graphics, lifecycle, gatepoints,
scales, magrittr, tibble, dplyr, tidyselect, purrr, rlang,
tidyr, viridis, grDevices, RColorBrewer, stringr
methods, lme4, stats, utils, graphics, lifecycle, scales,
magrittr, tibble, dplyr, tidyselect, purrr, rlang, tidyr,
viridis, grDevices, RColorBrewer, stringr
utils, graphics, lifecycle, scales, magrittr, tibble, dplyr,
purrr, rlang, tidyr, viridis, grDevices, RColorBrewer, stringr
dplyr, purrr, tidyr, fuzzyjoin (>= 0.1.3), IRanges, Rcpp
dplyr, rlang, purrr, tidyr, fuzzyjoin (>= 0.1.3), IRanges,
Rcpp
rlang, tibble, purrr, tidyr, dplyr, tmaptools, httr, jsonlite,
stringr
tibble, dplyr, httr, jsonlite, lifecycle
tibble, dplyr, httr, jsonlite, lifecycle, progress
tibble, dplyr (>= 0.7), igraph, magrittr, utils, rlang, R6,
Rcpp, tools, stats, tidyr
tibble, dplyr (>= 0.7), igraph, magrittr, utils, rlang, R6,
Rcpp, tools, stats, tidyr, pillar
tibble, dplyr (>= 0.8), igraph, magrittr, utils, rlang, R6,
Rcpp, tools, stats, tidyr, pillar
tibble, dplyr (>= 0.8.5), igraph, magrittr, utils, rlang, R6,
Rcpp, tools, stats, tidyr, pillar
tibble, dplyr (>= 0.8.5), igraph, magrittr, utils, rlang, R6,
tools, stats, tidyr, pillar, cli
dplyr, infotheo, ggplot2, magrittr, purrr, rlang, tibble,
tidyselect, tidyverse
assertthat, jsonlite, purrr, dplyr (>= 0.8.3), magrittr, tidyr
(>= 1.0.0), tibble
assertthat, jsonlite, purrr, dplyr (>= 0.8.3), magrittr, tidyr
(>= 1.0.0), tibble, rlang
assertthat, jsonlite, purrr, dplyr (>= 1.0.0), magrittr, tidyr
(>= 1.0.0), tibble, rlang
cli (>= 2.4.0), crayon (>= 1.4.1), decorators, dplyr (>=
1.0.5), microservices, purrr (>= 0.3.4), rstudioapi (>= 0.13),
tibble (>= 3.1.0), usethat
dplyr, generics, gtools, Matrix, methods, mvrsquared (>=
0.1.0), Rcpp (>= 1.0.2), rlang, stats, stringr, textmineR,
tibble, tidyr, tidytext
dplyr, generics, gtools, Matrix, methods, mvrsquared (>=
0.1.0), Rcpp (>= 1.0.2), rlang, stats, stringr, tibble, tidyr,
tidytext
assertthat, dplyr, forcats, magrittr, pkgcond, purrr, rlang,
tidyr, tidyselect, utils
cowplot, dplyr, ggplot2, itsadug, magrittr, mgcv, rlang,
tibble, tidyr
dplyr, ggplot2, itsadug, magrittr, mgcv, rlang, tibble, tidyr
dplyr, ggplot2, magrittr, mgcv, rlang, tibble, tidyr
dplyr (>= 0.7.0), forcats, magrittr, ncdf4, ncmeta (>= 0.0.4),
purrr, RNetCDF (>= 1.9-1), rlang, tibble, yesno, tidyr
dplyr (>= 0.7.0), forcats, magrittr, ncdf4, ncmeta (>= 0.0.4),
purrr, RNetCDF (>= 1.9-1), rlang, tibble, tidyr
dplyr (>= 0.7.0), forcats, magrittr, ncdf4, ncmeta (>= 0.2.0),
purrr, RNetCDF (>= 1.9-1), rlang, tibble, tidyr
dplyr (>= 1.0.3), forcats, janitor (>= 2.1.0), lubridate (>=
1.7.9.2), magrittr (>= 2.0.1), purrr (>= 0.3.4), rlang (>=
0.4.10), stringr, stats, tibble, tidyr, vroom (>= 1.3.2),
tidyselect
rlang, tidyselect, dplyr, vctrs, tibble, scales, ggplot2 (>=
3.0.0), styler, purrr, ggstance, stringr, withr, tidyr (>=
1.0.2), digest, rioja
chk, dplyr, rlang, stringi, stringr, tibble, tidyr,
tidyselect, vctrs
xml2, tokenizers, stringr, tibble, dplyr, readr
rsample (>= 0.0.2), tidyr, dplyr, rstanarm, rlang, utils,
purrr, tibble
rsample (>= 0.0.2), tidyr (>= 0.7.1), dplyr, rstanarm (>=
2.15.3), rlang, utils, purrr, tibble, generics, ggplot2,
rsample (>= 0.0.2), tidyr (>= 0.7.1), dplyr, rstanarm (>=
2.15.3), rlang, utils, purrr, tibble, generics, ggplot2, vctrs
(>= 0.3.0), lifecycle
rsample (>= 0.0.2), tidyr (>= 0.7.1), dplyr (> 1.0.0),
rstanarm (>= 2.21.1), rlang, utils, purrr, tibble, generics,
ggplot2, vctrs (>= 0.3.0), tune (>= 0.1.2.9000), workflowsets
dplyr (> 1.0.0), generics, ggplot2, purrr, rlang, rsample (>=
0.0.2), rstanarm (>= 2.21.1), tibble, tidyr (>= 0.7.1), tune
(>= 0.2.0), utils, vctrs (>= 0.3.0), workflowsets
dplyr(>= 0.7), rlang, purrr, tibble, tidyr
dplyr (>= 0.7), rlang, purrr, knitr, generics, tibble
dplyr (>= 0.7), rlang, purrr, knitr, generics, stringr,
tibble, tidyr
dplyr (>= 0.7), generics, knitr, purrr, rlang, stringr,
tibble, tidyr
dplyr (>= 0.8.3), ggplot2, httr, lazyeval, magrittr, purrr,
Quandl, stringr, tibble, tidyr (>= 1.0.0), timetk, TTR, xml2,
xts, rlang, rstudioapi, crayon, cli
dplyr, ggplot2, httr, lazyeval, magrittr, purrr, Quandl,
stringr, tibble, tidyr, timetk, TTR, xml2, xts, rlang
dplyr (>= 0.8.3), ggplot2, httr, lazyeval, magrittr, purrr,
Quandl, riingo, alphavantager (>= 0.1.2), stringr, tibble,
tidyr (>= 1.0.0), timetk, timeDate, TTR, xml2, xts, rlang,
tidyselect, rstudioapi, crayon, cli
dplyr (>= 0.8.3), ggplot2, httr, lazyeval, magrittr, purrr,
Quandl, riingo, alphavantager (>= 0.1.2), stringr, tibble,
tidyr (>= 1.0.0), timetk (>= 2.0.0), timeDate, TTR, xts, rlang,
tidyselect, rstudioapi, crayon, cli
dplyr (>= 1.0.0), ggplot2, httr, curl, lazyeval, magrittr,
purrr, Quandl, riingo, readr, alphavantager (>= 0.1.2),
stringr, tibble, tidyr (>= 1.0.0), timetk (>= 2.4.0), timeDate,
TTR, xts, rlang, tidyselect, rstudioapi, crayon, cli, janitor
dplyr (>= 1.0.0), ggplot2, jsonlite, httr, curl, lazyeval,
magrittr, purrr, Quandl, riingo, readr, alphavantager (>=
0.1.2), stringr, tibble, tidyr (>= 1.0.0), timetk (>= 2.4.0),
timeDate, TTR, xts, rlang, tidyselect, rstudioapi, crayon, cli,
janitor
dplyr (>= 1.0.0), ggplot2, jsonlite, httr, curl, lazyeval,
magrittr, purrr, Quandl, riingo, readr, alphavantager (>=
0.1.2), stringr, tibble, tidyr (>= 1.0.0), timetk (>= 2.4.0),
timeDate, TTR, xts, rlang, tidyselect
dplyr (>= 1.0.0), ggplot2, jsonlite, httr, curl, lazyeval,
magrittr, purrr, Quandl, riingo, readr, readxl, alphavantager
(>= 0.1.2), stringr, tibble, tidyr (>= 1.0.0), timetk (>=
2.4.0), timeDate, TTR, xts, rlang, tidyselect
dplyr, httr, jsonlite, magrittr, xml2, stringr, purrr, stats,
tidyr, plyr, labelled, furrr
dplyr, httr, jsonlite, magrittr, xml2, stringr, purrr, stats,
tidyr, labelled, furrr
reshape2, dplyr (>= 0.2), stringi, lazyeval
dplyr (>= 0.4), stringi, lazyeval, magrittr, Rcpp
tibble, dplyr (>= 0.4), stringi, lazyeval, magrittr, Rcpp
dplyr (>= 0.7.0), glue, magrittr, purrr, rlang, Rcpp, stringi,
tibble, tidyselect
dplyr (>= 0.7.0), glue, magrittr, purrr, Rcpp, rlang, stringi,
tibble, tidyselect
dplyr (>= 0.7.0), glue, magrittr, purrr, Rcpp, rlang, stringi,
tibble, tidyselect (>= 0.2.5)
dplyr (>= 0.7.0), glue, magrittr, purrr, Rcpp, rlang, stringi,
tibble, tidyselect (>= 0.2.5), utils
dplyr (>= 0.8.2), ellipsis (>= 0.1.0), glue, magrittr, purrr,
Rcpp, rlang, stringi, tibble (>= 2.1.1), tidyselect (>= 0.2.5),
utils, vctrs (>= 0.2.0), lifecycle
dplyr (>= 0.8.2), ellipsis (>= 0.1.0), glue, magrittr, purrr,
Rcpp, rlang, stringi, tibble (>= 2.1.1), tidyselect (>= 1.1.0),
utils, vctrs (>= 0.3.0), lifecycle
dplyr (>= 0.8.2), ellipsis (>= 0.1.0), glue, magrittr, purrr,
rlang, tibble (>= 2.1.1), tidyselect (>= 1.1.0), utils, vctrs
(>= 0.3.0), lifecycle
dplyr (>= 0.8.2), ellipsis (>= 0.1.0), glue, lifecycle,
magrittr, purrr, rlang, tibble (>= 2.1.1), tidyselect (>=
1.1.0), utils, vctrs (>= 0.3.6)
dplyr (>= 1.0.0), ellipsis (>= 0.1.0), glue, lifecycle,
magrittr, purrr, rlang, tibble (>= 2.1.1), tidyselect (>=
1.1.0), utils, vctrs (>= 0.3.7)
assertthat, crayon, dplyr, glue, lubridate, purrr, readr,
reticulate (>= 1.24), rgee, rlang, sf, stringr, tidyr
tibble, dplyr, magrittr, tidyr, ggplot2, rlang, purrr,
lifecycle, methods, plotly, tidyselect, utils, ellipsis,
pillar, stringr, cli, fansi
tibble, dplyr, magrittr, tidyr, ggplot2, rlang, purrr,
lifecycle, methods, plotly, ellipsis, tidyselect, utils
Seurat, tibble, dplyr, magrittr, tidyr, ggplot2, rlang, purrr,
lifecycle, methods, plotly, tidyselect, utils, ellipsis,
pillar, stringr, cli, fansi
Seurat, tibble, dplyr, magrittr, tidyr (>= 1.2.0), ggplot2,
rlang, purrr, lifecycle, methods, plotly, tidyselect, utils,
ellipsis, vctrs, pillar, stringr, cli, fansi
dplyr, ellipsis, glue, purrr, rlang, smd, stats, tidyr,
tidyselect
dplyr, purrr, rlang, smd, stats, tidyr, tidyselect
tibble, readr, tidyr, dplyr, magrittr, purrr
tibble, readr, tidyr, dplyr, magrittr, purrr, stringr, knitr
tibble, readr, tidyr, dplyr, magrittr, purrr, stringr, knitr,
kableExtra, miniUI, shiny, rlang
dplyr, tidyr, purrr, stringr, readr, jsonlite, tibble
stringdist, rlang, magrittr, dplyr, purrr, attempt
magrittr, tibble, dplyr, ggplot2, tidyr, forcats, rlang,
kernlab, LowRankQP, rgenoud, optimx, stats
data.table, magrittr, rlang (>= 0.4.0), methods, tidyselect
(>= 1.0.0), ellipsis, vctrs (>= 0.2.4)
data.table, magrittr, rlang (>= 0.4.0), methods, tidyselect
(>= 1.1.0), vctrs (>= 0.3.0), lifecycle (>= 0.2.0)
data.table, magrittr, rlang (>= 0.4.5), methods, tidyselect
(>= 1.1.0), vctrs (>= 0.3.1), lifecycle (>= 0.2.0)
cli (>= 3.0.0), crayon, data.table, dplyr, ggplot2 (>= 3.1.0),
magrittr, rlang, scales, sf (>= 1.0.0), terra (>= 1.5-12),
tibble, tidyr
cli (>= 3.0.0), crayon, data.table, ggplot2 (>= 3.1.0),
magrittr, rlang, scales, sf (>= 1.0.0), terra (>= 1.5-12)
rlang, dplyr, stringr, hunspell, generics, Matrix, tokenizers,
janeaustenr, purrr (>= 0.1.1), methods, stopwords
rlang, tibble, dplyr, stringr, hunspell, generics, Matrix,
tokenizers, janeaustenr, purrr (>= 0.1.1), methods
rlang, tibble, dplyr, stringr, hunspell, generics, lifecycle,
Matrix, tokenizers, janeaustenr, purrr (>= 0.1.1), methods,
vctrs
rlang (>= 0.4.10), tibble, dplyr, stringr, hunspell, generics,
lifecycle, Matrix, tokenizers, janeaustenr, purrr (>= 0.1.1),
methods, vctrs
dplyr, generics, hunspell, janeaustenr, lifecycle, Matrix,
methods, purrr (>= 0.1.1), rlang (>= 0.4.10), stringr, tibble,
tokenizers, vctrs
utils, stats, grDevices, methods, dplyr, forcats, grid, purrr,
stringr, tibble, tidyr, tidyselect, extrafont, rlang, magrittr
utils, stats, grDevices, methods, rlang (>= 0.2.0), dplyr (>=
0.8.0), forcats, grid, purrr, stringr, tibble, tidyr,
tidyselect, extrafont, magrittr
utils, stats, grDevices, methods, rlang (>= 0.4.0), dplyr (>=
1.0.0), forcats, grid, purrr, stringr, tibble, tidyr,
tidyselect, extrafont, magrittr
dplyr, tibble, readr, httr, htmltools, magrittr, stringr,
assertthat, scales, here, rlang, sf, lubridate, tidyr
dplyr, zip, tibble, readr, httr, htmltools, magrittr, stringr,
assertthat, scales, here, rlang, sf, lubridate, tidyr, tools
dplyr, zip, tibble, readr, data.table, httr, htmltools,
magrittr, stringr, assertthat, scales, here, rlang, sf,
lubridate, hms, tidyr, tools
dplyr, zip, tibble, readr, data.table, httr, htmltools,
magrittr, stringr, assertthat, scales, here, rlang, sf,
lubridate, hms, tidyr, tools, digest
dplyr, zip, tibble, readr, data.table, httr, magrittr,
assertthat, rlang, sf, lubridate, hms, tidyr, tools, digest
dplyr, zip (>= 2.0.1), tibble, readr, data.table (>= 1.12.8),
httr, magrittr, assertthat, rlang, sf, lubridate, hms, tidyr,
tools, digest
dplyr, zip (>= 2.0.1), tibble, readr, data.table (>= 1.12.8),
httr, assertthat, rlang, sf, lubridate, hms, tidyr, tools,
digest
dplyr, zip (>= 2.0.1), tibble, readr, data.table (>= 1.12.8),
httr, assertthat, rlang, sf, lubridate, hms, tidyr, tools,
digest, checkmate
gtfsio (>= 0.1.0), dplyr, zip (>= 2.0.1), tibble, readr,
data.table (>= 1.12.8), httr, assertthat, rlang, sf, lubridate,
hms, tidyr, tools, digest, checkmate
gtfsio (>= 0.1.0), dplyr, zip (>= 2.0.1), tibble, readr,
data.table (>= 1.12.8), httr, rlang, sf, lubridate, hms, tidyr,
tools, digest, checkmate, geodist
gtfsio (>= 0.1.0), dplyr, data.table (>= 1.12.8), httr, rlang,
sf, hms, digest, checkmate, geodist
tidybayes, purrr, tidyr, dplyr, readr, rlang
ape, dplyr, lazyeval, magrittr, methods, tibble
ape, dplyr, lazyeval, magrittr, methods, rlang, tibble, utils
ape, dplyr, lazyeval, magrittr, methods, rlang, tibble
ape, dplyr, lazyeval, magrittr, methods, rlang, tibble, tidyr,
tidyselect
ape, dplyr, lazyeval, magrittr, methods, rlang, tibble, tidyr,
tidyselect, yulab.utils (>= 0.0.4)
ape, dplyr, lazyeval, magrittr, methods, rlang, tibble, tidyr,
tidyselect, yulab.utils (>= 0.0.4), pillar
broom, DBI, dplyr, forcats, ggplot2, haven, httr, hms,
jsonlite, lubridate, magrittr, modelr, purrr, readr, readxl,
stringr, tibble, rvest, tidyr, xml2
broom, dplyr, feather, forcats, ggplot2, haven, httr, hms,
jsonlite, lubridate, magrittr, modelr, purrr, readr, readxl,
stringr, tibble, rvest, tidyr, xml2
broom, dplyr, forcats, ggplot2, haven, httr, hms, jsonlite,
lubridate, magrittr, modelr, purrr, readr, readxl, stringr,
tibble, rvest, tidyr, xml2
broom, cli, crayon, dplyr, dbplyr, forcats, ggplot2, haven,
hms, httr, jsonlite, lubridate, magrittr, modelr, purrr, readr,
readxl, reprex, rlang, rstudioapi, rvest, stringr, tibble,
tidyr, xml2
rlang (>= 0.3.0), methods, classInt, ggplot2
data.table (>= 1.9.8), magrittr, quantreg (>= 5.51), rlang (>=
0.3.0), methods, mgcv, classInt, ggplot2, stats, fastDummies
data.table (>= 1.9.8), magrittr, quantreg (>= 5.51), rlang (>=
0.3.0), methods, mgcv, classInt, ggplot2, stats, fastDummies,
utils
magrittr, dplyr, tidyr, WikidataR, stringr, glue, DBI,
RSQLite, tibble, purrr, usethis, WikidataQueryServiceR, fs,
rlang (>= 0.1.2)
magrittr, dplyr, tidyr, WikidataR, stringr, glue, DBI,
RSQLite, tibble, purrr, usethis, WikidataQueryServiceR, fs,
rlang (>= 0.1.2), progress
magrittr, dplyr, tidyr, WikidataR, stringr, glue, DBI,
RSQLite, tibble, purrr, usethis, WikidataQueryServiceR, fs,
rlang (>= 0.1.2), progress, jsonlite
magrittr, dplyr, tidyr, WikidataR, stringr, glue, DBI,
RSQLite, tibble, purrr, usethis, WikidataQueryServiceR, fs,
rlang (>= 0.1.2), progress, jsonlite, pool
magrittr, dplyr, tidyr, WikidataR, stringr, glue, DBI,
RSQLite, tibble, purrr, usethis, WikidataQueryServiceR, fs,
rlang (>= 0.1.2), progress, jsonlite, pool, WikipediR
magrittr, dplyr, tidyr, WikidataR, stringr, glue, DBI,
RSQLite, tibble, purrr, usethis, WikidataQueryServiceR, fs,
rlang (>= 0.1.2), progress, jsonlite, pool, WikipediR, vctrs
ggplot2, lattice, manipulate, MASS, methods
ggplot2, lattice, manipulate, MASS, methods, rlang
alakazam (>= 0.2.6), tidyr, dplyr (>= 0.5.0), doParallel,
foreach, graphics, grid, iterators, lazyeval, parallel, stats
tidyr, dplyr, doParallel, foreach, graphics, grid, iterators,
parallel, stats
tidyr, dplyr (>= 0.5.0), doParallel, foreach, graphics, grid,
iterators, parallel, stats
alakazam (>= 0.2.1), tidyr, dplyr (>= 0.5.0), doParallel,
foreach, graphics, grid, iterators, parallel, stats
alakazam (>= 0.2.6), tidyr, dplyr (>= 0.5.0), doParallel,
foreach, graphics, grid, iterators, parallel, stats
alakazam (>= 0.2.11), dplyr (>= 0.7.0), doParallel, foreach,
graphics, gridExtra, gtools, iterators, lazyeval, parallel,
rlang, shazam (>= 0.1.10), stats, stringi, tidyr
alakazam (>= 0.3.0), dplyr (>= 0.8.1), doParallel, foreach,
graphics, gridExtra, gtools, iterators, lazyeval, parallel,
rlang, shazam (>= 0.2.0), stats, stringi, tidyr
alakazam (>= 1.0.0), shazam (>= 1.0.0), dplyr (>= 0.8.1),
doParallel, foreach, graphics, gridExtra, gtools, iterators,
lazyeval, parallel, rlang, stats, stringi, tidyr (>= 0.1.0)
alakazam (>= 1.1.0.999), dplyr (>= 0.8.1), doParallel,
foreach, graphics, gridExtra, gtools, iterators, lazyeval,
parallel, rlang, stats, stringi, tidyr (>= 0.1.0)
stringr, magrittr, rgdal, rgeos, sp, utils, rappdirs,
maptools, httr, uuid
stringr, magrittr, rgdal, rgeos, sp, utils, rappdirs,
maptools, httr, uuid, sf, dplyr
stringr, magrittr, rgdal, sp, utils, rappdirs, maptools, httr,
uuid, sf, dplyr
stringr, magrittr, rgdal, sp, utils, rappdirs, maptools, httr,
uuid, sf, dplyr, methods
clue, ggplot2, igraph, lwgeom, sf, smoothr
dplyr, ggplot2, cowplot, tidyr, tibble, magrittr, lazyeval,
miniUI, shiny
dplyr, ggplot2, cowplot, tidyr, tibble, magrittr, miniUI,
shiny
dplyr, memoise, pillar, purrr, rlang, tibble, tidygraph,
tidyselect, vctrs
dplyr, memoise, pillar, purrr, rlang, tibble, tidygraph, vctrs
dplyr, ggfittext, ggplot2, lubridate, scales
parallel, gss, lattice, pheatmap, doParallel, foreach,
reshape, edgeR
parallel, gss, lattice, pheatmap, doParallel, foreach,
reshape, edgeR, grDevices, graphics
parallel, gss, lattice, pheatmap, doParallel, foreach,
reshape, grDevices, graphics
gss, lattice, pheatmap, reshape, grDevices, graphics
gss, mgcv, lattice, pheatmap, reshape, grDevices, graphics
graphics, grDevices, stats, utils, methods
dplyr, lubridate, stringr, futile.logger, ggplot2, gtable,
grid, mtconnectR
rlang, dplyr, lubridate, stringr, futile.logger, ggplot2,
gtable, grid, mtconnectR
base, graphics, magrittr, dplyr, lubridate, ggplot2, stats
lava, numDeriv, stats, graphics, grDevices, utils
lava, numDeriv, stats, graphics, grDevices, utils, methods
xts, zoo, xtable, shiny, DBI, openxlsx, data.table (>= 1.9.4),
RPostgres (>= 1.2.0), jsonlite (>= 1.1), data.table (>=
1.9.4), utils, xts, DBI,
recipes (>= 0.1.4), rsample, broom, dplyr (>= 0.7.0), ggplot2,
forcats, stringr, plotly, lazyeval (>= 0.2.0), lubridate (>=
1.6.0), padr (>= 0.3.0), purrr (>= 0.2.2), readr (>= 1.0.0),
stringi (>= 1.1.5), tibble (>= 1.2), tidyr (>= 0.6.1), xts (>=
0.9-7), zoo (>= 1.7-14), rlang (>= 0.1.2), slider, timeDate,
forecast, hms, assertthat
recipes (>= 0.1.4), rsample, dplyr (>= 0.7.0), ggplot2,
forcats, stringr, plotly, lazyeval (>= 0.2.0), lubridate (>=
1.6.0), padr (>= 0.3.0), purrr (>= 0.2.2), readr (>= 1.0.0),
stringi (>= 1.1.5), tibble (>= 1.2), tidyr (>= 0.6.1), xts (>=
0.9-7), zoo (>= 1.7-14), rlang (>= 0.1.2), slider, anytime,
timeDate, forecast, hms, assertthat
recipes (>= 0.1.4), rsample, dplyr (>= 0.7.0), ggplot2,
forcats, stringr, plotly, lazyeval (>= 0.2.0), lubridate (>=
1.6.0), padr (>= 0.3.0), purrr (>= 0.2.2), readr (>= 1.0.0),
stringi (>= 1.1.5), tibble (>= 1.2), tidyr (>= 0.6.1), xts (>=
0.9-7), zoo (>= 1.7-14), rlang (>= 0.1.2), tidyselect, slider,
anytime, timeDate, forecast, hms, assertthat
recipes (>= 0.1.4), rsample, dplyr (>= 1.0.0), ggplot2,
forcats, stringr, plotly, lazyeval (>= 0.2.0), lubridate (>=
1.6.0), padr (>= 0.5.2), purrr (>= 0.2.2), readr (>= 1.3.0),
stringi (>= 1.4.6), tibble (>= 3.0.3), tidyr (>= 1.1.0), xts
(>= 0.9-7), zoo (>= 1.7-14), rlang (>= 0.4.7), tidyselect (>=
1.1.0), slider, anytime, timeDate, forecast, hms, assertthat
recipes (>= 0.1.4), rsample, dplyr (>= 1.0.0), ggplot2,
forcats, stringr, plotly, lazyeval (>= 0.2.0), lubridate (>=
1.6.0), padr (>= 0.5.2), purrr (>= 0.2.2), readr (>= 1.3.0),
stringi (>= 1.4.6), tibble (>= 3.0.3), tidyr (>= 1.1.0), xts
(>= 0.9-7), zoo (>= 1.7-14), rlang (>= 0.4.7), tidyselect (>=
1.1.0), slider, anytime, timeDate, forecast, hms, assertthat,
generics
recipes (>= 0.1.4), rsample, dplyr (>= 1.0.0), ggplot2,
forcats, stringr, plotly, lubridate (>= 1.6.0), padr (>=
0.5.2), purrr (>= 0.2.2), readr (>= 1.3.0), stringi (>= 1.4.6),
tibble (>= 3.0.3), tidyr (>= 1.1.0), xts (>= 0.9-7), zoo (>=
1.7-14), rlang (>= 0.4.7), tidyselect (>= 1.1.0), slider,
anytime, timeDate, forecast, hms, assertthat, generics
recipes (>= 0.1.4), rsample, dplyr (>= 1.0.0), ggplot2,
forcats, stringr, plotly, lubridate (>= 1.6.0), padr (>=
0.5.2), purrr (>= 0.2.2), readr (>= 1.3.0), stringi (>= 1.4.6),
tibble (>= 3.0.3), tidyr (>= 1.1.0), xts (>= 0.9-7), zoo (>=
1.7-14), rlang (>= 0.4.7), tidyselect (>= 1.1.0), slider,
anytime, timeDate, forecast, tsfeatures, hms, assertthat,
generics
recipes (>= 0.2.0), rsample, dplyr (>= 1.0.0), ggplot2,
forcats, stringr, plotly, lubridate (>= 1.6.0), padr (>=
0.5.2), purrr (>= 0.2.2), readr (>= 1.3.0), stringi (>= 1.4.6),
tibble (>= 3.0.3), tidyr (>= 1.1.0), xts (>= 0.9-7), zoo (>=
1.7-14), rlang (>= 0.4.7), tidyselect (>= 1.1.0), slider,
anytime, timeDate, forecast, tsfeatures, hms, assertthat,
generics
htmltools (>= 0.2.6), htmlwidgets (>= 0.6), jsonlite,
rmarkdown, shiny
htmltools (>= 0.2.6), htmlwidgets (>= 0.6), jsonlite,
magrittr, methods, rmarkdown, shiny
htmltools (>= 0.2.6), htmlwidgets (>= 0.6), jsonlite,
lubridate, magrittr, methods, rmarkdown, shiny
commonmark (>= 1.6), glue, magrittr, purrr, R6, stringr, xml2,
xslt, yaml
BiocManager, clusterProfiler, dplyr, limma, org.Hs.eg.db,
stringr, tibble, pheatmap, ggplot2, survival, survminer,
patchwork
dplyr, ggplot2, gt, jsonlite, magrittr, purrr, rlang (>=
0.1.2), rvest, stringr, xml2
curl, dplyr, ggplot2, gt, jsonlite, magrittr, purrr, rlang (>=
0.1.2), rvest, stringr, xml2
curl, dplyr, ggplot2, gt, jsonlite, magrittr, purrr, rlang (>=
0.1.2), rvest, stringr, xml2, R.utils
curl, dplyr, ggplot2, gt, jsonlite, magrittr, purrr, rlang (>=
0.1.2), rvest (>= 1.0.0), stringr, xml2, R.utils
rlang, igraph, network, ggplot2, GGally, LaplacesDemon,
changepoint, parallel, doParallel, foreach, methods, mniw
stringr, dplyr, magrittr, stringi, cpp11
methods, Rcpp (>= 0.12.0), RcppParallel (>= 5.0.1), rstan (>=
2.18.1), rstantools (>= 2.1.1), loo (>= 2.3.1), ggplot2 (>=
3.3.2), gridExtra (>= 2.3), maptools (>= 1.0.2), rgeos, sp,
spdep, broom, nlme (>= 3.1.152), stats, spam, ggpubr, callr,
Rdpack
methods, Rcpp (>= 0.12.0), broom, rstan (>= 2.18.1), ggplot2
(>= 3.3.2), nlme (>= 3.1.152), stats, ggpubr, sp, Rdpack
parallel, slam (>= 0.1-31), stats, tools, utils
parallel, slam (>= 0.1-31), stats, tools, utils, graphics
Rcpp, parallel, slam (>= 0.1-37), stats, tools, utils,
graphics
Rcpp, parallel, slam (>= 0.1-37), stats, tools, utils,
graphics, xml2
NLP (>= 0.1-2), tm (>= 0.6), boilerpipeR, RCurl, XML, RJSONIO
rgeos, grid, gridBase, sp, rgdal, classInt, RColorBrewer,
igraph, fields, vegan
sp, raster, grid, gridBase, rgdal, rgeos, classInt,
RColorBrewer
tmaptools (>= 1.2), sp, raster (>= 2.5-2), grid, rgdal, rgeos,
RColorBrewer, classInt, spdep, htmltools, htmlwidgets, leaflet
(>= 1.1.0), mapview, stats
tmaptools (>= 1.2-1), sp, raster (>= 2.5-2), grid, rgdal,
rgeos, RColorBrewer, classInt, spdep, htmltools, htmlwidgets,
leaflet (>= 1.1.0), mapview, stats
methods, sp, raster (>= 2.4-30), grid, gridBase, gridSVG,
rgdal, rgeos, classInt, htmlwidgets, KernSmooth, osmar,
RColorBrewer, spdep, svgPanZoom, XML,
methods, sp, raster (>= 2.5-2), grid, rgdal, rgeos, classInt,
htmltools, htmlwidgets, KernSmooth, osmar, RColorBrewer, spdep,
XML, leaflet, geosphere
sp, raster (>= 2.5-2), grid, rgdal, rgeos, classInt,
htmltools, htmlwidgets, KernSmooth, osmar, RColorBrewer, spdep,
XML, leaflet, geosphere, cartogram
methods, sp, raster (>= 2.5-2), grid, rgdal, rgeos, classInt,
htmltools, htmlwidgets, KernSmooth, osmar, RColorBrewer, spdep,
XML, leaflet, geosphere, cartogram
tmaptools (>= 1.2), sp, raster (>= 2.5-2), grid, rgdal, rgeos,
RColorBrewer, classInt, spdep, htmltools, htmlwidgets, leaflet,
mapview, stats
tmaptools (>= 1.0), sp, raster (>= 2.5-2), grid, rgdal, rgeos,
RColorBrewer, classInt, spdep, htmltools, htmlwidgets, leaflet,
mapview, stats
tmaptools (>= 2.0), sf (>= 0.6-0), units (>= 0.5-1), raster
(>= 2.5-2), grid, rgdal, rgeos, RColorBrewer, viridisLite,
classInt, htmltools, htmlwidgets, leaflet (>= 2.0.1), mapview,
stats
tmaptools (>= 2.0), sf (>= 0.6-0), units (>= 0.5-1), raster
(>= 2.5-2), grid, RColorBrewer, viridisLite, classInt,
htmltools, htmlwidgets, leaflet (>= 2.0.1), mapview, stats
tmaptools (>= 2.0-1), sf (>= 0.7-1), units (>= 0.6-1), raster
(>= 2.7-15), grid, RColorBrewer, viridisLite, classInt,
htmltools, htmlwidgets, leaflet (>= 2.0.2), mapview, stats
tmaptools (>= 2.0-2), sf (>= 0.7-1), lwgeom (>= 0.1-4), units
(>= 0.6-1), raster (>= 2.7-15), grid, RColorBrewer,
viridisLite, classInt, htmltools, htmlwidgets, leaflet (>=
2.0.2), leafsync, stats
tmaptools (>= 2.0-1), sf (>= 0.7-1), units (>= 0.6-1), raster
(>= 2.7-15), grid, RColorBrewer, viridisLite, classInt,
htmltools, htmlwidgets, leaflet (>= 2.0.2), leafsync, stats
tmaptools (>= 3.0), sf (>= 0.9-1), stars (>= 0.4-1), units (>=
0.6-1), grid, RColorBrewer, viridisLite, classInt (>= 0.4-3),
htmltools, htmlwidgets, leaflet (>= 2.0.2), leafsync, leafem
(>= 0.1), stats
tmaptools (>= 3.1), sf (>= 0.9-3), stars (>= 0.4-2), units (>=
0.6-1), grid, RColorBrewer, viridisLite, classInt (>= 0.4-3),
htmltools, htmlwidgets, widgetframe, leaflet (>= 2.0.2),
leafsync, leafem (>= 0.1), stats, rlang
tmaptools (>= 3.1), sf (>= 0.9-3), stars (>= 0.4-2), units (>=
0.6-1), grid, RColorBrewer, viridisLite, classInt (>= 0.4-3),
htmltools, htmlwidgets, widgetframe, leaflet (>= 2.0.2),
leafsync, leafem (>= 0.1), stats, rlang, utils
tmaptools (>= 3.1), sf (>= 0.9-7), stars (>= 0.5-0), units (>=
0.6-1), grid, RColorBrewer, viridisLite, classInt (>= 0.4-3),
htmltools, htmlwidgets, widgetframe, leaflet (>= 2.0.2),
leafsync, leafem (>= 0.1), stats, abind, rlang, utils
sp, grid, raster (>= 2.5-2), rgdal, rgeos, classInt,
KernSmooth, geosphere, magrittr, osmar, RColorBrewer,
rmapshaper, spdep, stats, XML
sp, grid, raster (>= 2.5-2), rgdal, rgeos, classInt,
KernSmooth, geosphere (>= 1.4-3), magrittr, osmar,
RColorBrewer, rmapshaper, spdep, stats, dichromat, XML
sp, grid, raster (>= 2.5-2), rgdal, rgeos, classInt,
KernSmooth, geosphere, magrittr, osmar, RColorBrewer,
rmapshaper, spdep, stats, dichromat, XML
sp, sf (>= 0.6-0), lwgeom (>= 0.1-4), units (>= 0.5-1), grid,
raster (>= 2.5-2), rgdal, rgeos, classInt, KernSmooth,
magrittr, RColorBrewer, viridisLite, stats, dichromat, XML
sp, sf (>= 0.7-1), lwgeom (>= 0.1-4), units (>= 0.6-1), grid,
raster (>= 2.7-15), rgdal, rgeos, classInt, KernSmooth,
magrittr, RColorBrewer, viridisLite, stats, dichromat, XML
sf (>= 0.9), lwgeom (>= 0.1-4), stars (>= 0.4-0), units (>=
0.6-1), grid, raster (>= 2.7-15), classInt, KernSmooth,
magrittr, RColorBrewer, viridisLite, stats, dichromat, XML
sf (>= 0.9.2), lwgeom (>= 0.1-4), stars (>= 0.4-1), units (>=
0.6-1), grid, magrittr, RColorBrewer, viridisLite, stats,
dichromat, XML
sf (>= 0.9.2), lwgeom (>= 0.1-4), stars (>= 0.4-1), units (>=
0.6-1), grid, classInt, magrittr, RColorBrewer, viridisLite,
stats, dichromat, XML
R.methodsS3, R.oo, MASS, Matrix, geometry
R.methodsS3, R.oo, MASS, Matrix, sgeostat, geometry
assertthat, data.table, Matrix, methods, R6, Rcpp, simcausal,
speedglm, stats, stringr
parallel, ggplot2, Rcpp (>= 0.12.0), stats
methods, utils, stats, network, sna, igraph, vegan, lme4 (>=
1.0), Rcpp (>= 0.11.0)
cli, curl, dplyr, httr, janitor, jsonlite, lubridate,
magrittr, purrr, readr, rvest, stringr, tidyr, withr
cli, crayon, data.table, dplyr, glue, httr, janitor, jsonlite,
lubridate, magrittr, purrr, readr, rlang, rvest, stringr,
tidyr, withr
utils, htmlwidgets, htmltools, magrittr, rlang, shiny (>=
1.1.0), shinyWidgets
numDeriv, tibble, Rdpack, Formula, prediction, margins,
generics
rstudioapi, lubridate, httr, jsonlite, magrittr, prettyunits,
dplyr, assertthat, purrr, glue, getPass, keyring
assertthat, dplyr, getPass, glue, httr, jsonlite, keyring,
lubridate, magrittr, prettyunits, purrr, rstudioapi, parsedate
assertthat, dplyr, getPass, glue, httr, jsonlite, keyring,
lubridate, magrittr, memoise, parsedate, prettyunits, purrr,
rstudioapi, stats, utils
dplyr (>= 1.0), tidyr (>= 1.0), PROJ, sf, tibble, rlang,
purrr, stringr, readr, utils, lifecycle
dplyr (>= 1.0), tidyr (>= 1.0), sf, tibble, rlang, purrr,
stringr, readr, utils, lifecycle
dplyr (>= 1.0), tidyr (>= 1.0), sf, geojsonsf, lwgeom, tibble,
rlang, purrr, stringr, readr, utils, lifecycle
dplyr, data.table, Rdpack, nortest, stats
BiasedUrn, dplyr, glmnet, latticeExtra, lhs
data.table (>= 1.9.8), geodist (>= 0.0.4), lubridate,
magrittr, stats
stats4, methods, modeltools, slam, tm (>= 0.5-8.5)
stats4, modeltools, slam, tm (>= 0.5-8.5)
stats4, methods, modeltools, slam, tm (>= 0.6)
graphics, stats, Matrix, torch (>= 0.5.0)
igraph, gdistance, plotly, raster, RColorBrewer, scales, sp
gdistance, plotly, raster, RColorBrewer, scales, sp
graph, gRbase (>= 1.7), qpgraph, fields (>= 7.0)
graph, gRbase (>= 1.7), qpgraph, fields, methods
ggplot2 (>= 3.3.2), dplyr (>= 1.0.2), stringr (>= 1.4.0),
readr (>= 1.4.0), scales (>= 1.1.1), ggrepel, egg, grid,
gridExtra, magrittr (>= 1.5), utils, toprdata
ggplot2 (>= 3.3.2), dplyr (>= 1.0.2), stringr (>= 1.4.0),
scales (>= 1.1.1), ggrepel, egg, grid, gridExtra, magrittr (>=
1.5), utils, tidyr, toprdata
ggplot2, scales, sf, TDA, parallel, methods
Rcpp, R6, withr, rlang, methods, utils, stats
Rcpp, R6, withr, rlang, methods, utils, stats, bit64
Rcpp, R6, withr, rlang, methods, utils, stats, bit64, magrittr
Rcpp, R6, withr, rlang, methods, utils, stats, bit64,
magrittr, tools, coro, callr, cli
Rcpp, R6, withr, rlang, methods, utils, stats, bit64,
magrittr, tools, coro, callr, cli, ellipsis
Rcpp, R6, withr, rlang, methods, utils, stats, bit64,
magrittr, tools, coro (>= 1.0.2), callr, cli, ellipsis
torch (>= 0.2.0), fs, rlang, rappdirs, utils, tools, glue
torch (>= 0.3.0), fs, rlang, rappdirs, utils, tools, glue,
Rcpp, withr
torch, fs, zip, pins, torchvision, stringr
torch (>= 0.5.0), fs, zip, pins, torchvision, stringr, withr
torch (>= 0.5.0), fs, zip, pins, torchvision, stringr, withr,
utils
torch (>= 0.1.0), fs, rlang, rappdirs, utils, jpeg, png, abind
torch (>= 0.2.0), fs, rlang, rappdirs, utils, jpeg, png, abind
torch (>= 0.3.0), fs, rlang, rappdirs, utils, jpeg, png, abind
torch (>= 0.3.0), fs, rlang, rappdirs, utils, jpeg, png,
abind, zip
torch (>= 0.3.0), fs, rlang, rappdirs, utils, jpeg, png,
abind, withr
Rcpp, torch (>= 0.9.0), rlang, glue, withr
survival, assertthat, ggplot2, scales, grid, gridExtra
bibliometrix, igraph, CINNA, dplyr, rebus, magrittr, stringr,
tidyr, stats, rlang, tibble
MASS, tibble, dplyr, stats, utils, grDevices
dplyr, tidyr, DT (>= 0.1.24), leaflet (>= 1.0.0), ggplot2 (>=
3.0.0), magrittr, shiny, shinydashboard, RColorBrewer, readxl,
tools, shinyAce, shinycssloaders
data.table, rmongodb, tcpl (>= 1.0), DBI, RMySQL
grDevices, methods, S4Vectors, grid, rlang, stats,
BiocGenerics, pryr, tidyr, utils
adehabitatHR, dplyr, foreach, geosphere, ggplot2, lubridate,
magrittr, maptools, methods, purrr, raster, rgeos, rgdal (>=
1.5-0), rlang, sf (>= 0.7-4), sp (>= 1.4-1), tidyr
adehabitatHR, dplyr, foreach, geosphere, ggplot2, lubridate,
magrittr, maptools, methods, purrr, raster, rlang, sf (>=
0.7-4), sp (>= 1.4-1), tidyr
adehabitatHR, dplyr, foreach, geosphere, ggplot2, lubridate,
magrittr, maps, maptools, Matching, methods, move, purrr,
raster, rgdal (>= 1.5-0), rgeos, rlang, sf (>= 0.7-4), sp (>=
1.4-1), tidyr
png, SDMTools, neuralnet, raster, Rcpp, MASS, grDevices,
graphics, stats
png, SDMTools, neuralnet, raster, Rcpp, MASS, grDevices,
graphics, stats, shiny
png, SDMTools, neuralnet, raster, Rcpp, MASS, grDevices,
graphics, stats, testthat, shiny
png, neuralnet, raster, Rcpp, MASS, grDevices, graphics,
stats, shiny
tibble, data.table, rgdal, sp, lubridate, methods
tibble, data.table, sp, lubridate, methods
cli (>= 3.0.0), googledrive (> 1.0.1), rmarkdown
parallel, XML, RSQLite, jsonlite, raster, scam, fda, ggmap,
leaflet, gridExtra, gtable
parallel, XML, RSQLite, jsonlite, raster, scam, fda, ggmap,
leaflet, gridExtra, gtable, colorspace
ggplot2, ggridges, xml2, RSQLite, jsonlite, raster, scam,
foreach, fda, sp, leaflet, ggmap, gridExtra, gtable
colorspace, zoo, foreach, mgcv, plotly, DT, changepoint,
shiny, shinyjs, shinydashboard, shinyWidgets, sf, mapdeck, V8
fastdigest, ggplot2, lattice, gridGraphics, methods,
CodeDepends (>= 0.6.2), RJSONIO, rsolr, htmltools, miniUI,
shiny, rmarkdown, roprov (>= 0.1.1), rlang
fastdigest, ggplot2, lattice, gridGraphics, methods,
CodeDepends, RJSONIO, rsolr, htmltools, miniUI, shiny,
rmarkdown
fastdigest, ggplot2, lattice, gridGraphics, methods,
CodeDepends, RJSONIO, rsolr, htmltools, miniUI, shiny,
rmarkdown, knitr
fastdigest, ggplot2, lattice, gridGraphics, methods,
CodeDepends (>= 0.6.2), RJSONIO, rsolr, htmltools, miniUI,
shiny, rmarkdown, roprov (>= 0.0.3), rlang
EBImage, data.table, dplyr, Momocs, raster, zoo, plyr,
pastecs, animation, features, jpeg, wesanderson, ggplot2,
graphics, stats, utils
EBImage, data.table, dplyr, Momocs, raster, zoo, plyr,
pastecs, features, jpeg, ggplot2, graphics, stats, utils
methods, ore (>= 1.3.0), reportr, shades
methods, ore (>= 1.3.0), reportr, shades, RNifti
magrittr, tibble, ggplot2, dplyr, tidyr, purrr, cli, crayon,
sandwich, lmtest, broom, msm, rstudioapi
magrittr, tibble, ggplot2, dplyr, tidyr, purrr, cli, crayon,
fixest (>= 0.10.4), sandwich, broom, msm, rstudioapi
rlang, magrittr, dplyr, stringr, crul, purrr, jsonlite
crul, jsonlite, memoise, data.table, digest
crul, arrow, memoise, data.table, digest
FNN, moments, pryr, graphics, grDevices, lmtest
RCurl, dplyr, glue, lubridate, magrittr, purrr, stringr,
tibble, tidyr, usethis, xml2
data.table, reshape2, taxize, getPass, units, XML, RCurl, plyr
data.table, stats, reshape2, taxize, getPass, units, XML,
RCurl, plyr
data.table, stats, reshape2, taxize, getPass, units, suppdata,
curl, XML, RCurl, plyr
XML, jsonlite, httr, dplyr, data.table, taxize
methods, stats, utils, XML, jsonlite, httr, dplyr, data.table,
taxize
cluster, psych, pastecs, NbClust, graphics, grDevices, stats,
utils, GPArotation
Rcpp (>= 1.0.4.6), minpack.lm, numDeriv, ucminf, MASS, capushe
methods, lattice, sp (>= 1.0-14), spacetime (>= 1.0-0), rgdal,
rgeos
methods, lattice, sp (>= 1.1-0), spacetime (>= 1.0-0)
stats, utils, graphics, methods, lattice, sp (>= 1.1-0),
spacetime (>= 1.0-0)
stats, utils, graphics, methods, lattice, sp (>= 1.1-0),
spacetime (>= 1.0-0), zoo
signal, utils, stats, graphics, plotrix, grDevices
Formula, multcomp, variables, basefun (>= 0.0-40), sandwich,
stats, survival, graphics
Formula, multcomp, variables (>= 1.0-0), basefun (>= 1.0-0),
sandwich, stats, survival, graphics
Formula, multcomp, variables (>= 1.0-0), basefun (>= 1.0-2),
sandwich, stats, survival, graphics
Formula, multcomp, variables (>= 1.0-0), basefun (>= 1.0-3),
sandwich, stats, survival, graphics
Formula, multcomp, variables (>= 1.0-2), basefun (>= 1.0-5),
sandwich, stats, survival, graphics
Formula, multcomp, variables (>= 1.0-2), basefun (>= 1.0-5),
sandwich, stats, survival, graphics, Matrix, methods
Formula, multcomp, variables (>= 1.0-4), basefun (>= 1.0-8),
sandwich, stats, survival, graphics, Matrix, methods
Formula, multcomp, variables (>= 1.0-4), basefun (>= 1.1-2),
sandwich, stats, survival, graphics, Matrix, methods
Formula, multcomp, variables (>= 1.0-4), basefun (>= 1.1-2),
sandwich, stats, survival, graphics, Matrix, methods, mvtnorm
alabama, lme4 (>= 1.1.19), Matrix, methods, nlme, TMB (>=
1.7.15), stats, variables (>= 1.0.2), basefun (>= 1.0.6)
alabama, lme4 (>= 1.1.19), Matrix, methods, nlme, TMB (>=
1.7.15), stats, variables (>= 1.0.2), basefun (>= 1.0.6),
mvtnorm, numDeriv, MASS, coneproj
alabama, lme4 (>= 1.1.19), Matrix, methods, mgcv (>= 1.8.34),
nlme, TMB (>= 1.7.15), stats, variables (>= 1.0.2), basefun (>=
1.0.6), numDeriv, MASS, coneproj
mlt, basefun, sandwich, ParamHelpers, lhs, mlr, smoof, stats
rootSolve, truncSP, survival, SQUAREM, methods
cowplot, dplyr, ggplot2, purrr, magrittr, ggarchery,
geomtextpath, stats
reticulate, pbapply, osfr, LSAfun, dplyr, remotes
Rcpp (>= 0.12.15), tweenr, rlang, sf, lpSolve
graphics, Rcpp, statmod, stats, survival
grDevices, graphics, stats, Rcpp (>= 0.12.10)
grDevices, graphics, methods, stats, Rcpp (>= 0.12.10)
grDevices, graphics, methods, stats, Rcpp (>= 0.12.10),
data.table
DEoptim, graphics, MASS, rootSolve, Runuran, squash, stats,
TSA
DEoptim, ggplot2, ggpubr, graphics, MASS, rootSolve, Runuran,
stats, squash, TSA
methods, stats, graphics, grDevices, dbarts (>= 0.8-5)
methods, stats, graphics, grDevices, mvtnorm, dbarts (>=
0.8-7), rstan (>= 2.8.1)
methods, stats, graphics, grDevices, mvtnorm, lme4, nlme,
dbarts (>= 0.9-1),
Matrix, gtools, future, matrixStats, PRROC
XML, RCurl, methods, utils, reshape2, data.table
abind, plyr, ggplot2, lmtest, lmodel2, np, boot
lazyeval, ape, geiger, utils, data.table
Rcpp (>= 1.0.2), apTreeshape, graphics, methods
ggparty, ggplot2, partykit, dplyr, ggnewscale, gtable, stats,
tidyr, cluster, grid, yardstick, seriation
colorspace, data.table (>= 1.8.8), grid, gridBase, igraph,
RColorBrewer, shiny (>= 0.8.0)
colorspace, data.table (>= 1.8.8), ggplot2, grid, gridBase,
igraph, RColorBrewer, shiny (>= 0.8.0)
colorspace, data.table (>= 1.8.8), ggplot2, grid, gridBase,
igraph, RColorBrewer, shiny (>= 0.12.0)
colorspace, data.table (>= 1.8.8), ggplot2, grid, gridBase,
igraph, methods, RColorBrewer, shiny (>= 0.12.0)
Matrix, Rcpp (>= 1.0.1), rpart, stats, utils
Rcpp (>= 0.10.3), lazyeval, phytools, geiger
adephylo, shiny, RLumShiny, utils, adegenet, adegraphics,
combinat, compiler, phangorn, Rcpp
adegenet, adegraphics, adephylo, combinat, compiler, distory,
fields, htmlwidgets, MASS, phangorn, Rcpp, rgl, RLumShiny,
scatterD3, shiny, shinyBS, utils
adephylo, shiny, RLumShiny, utils, adegenet, adegraphics,
combinat, compiler, phangorn, Rcpp, shinyBS, shinyRGL
adegenet, adegraphics, adephylo, combinat, compiler, distory,
fields, htmlwidgets, MASS, phangorn, Rcpp, rgl, rglwidget,
RLumShiny, scatterD3, shiny, shinyBS, utils
adegenet, adegraphics, adephylo, combinat, compiler, distory,
fields, htmlwidgets, MASS, phangorn, Rcpp, RLumShiny,
scatterD3, shiny, shinyBS, utils
adegenet, adegraphics, adephylo, combinat, compiler, distory,
fields, htmlwidgets, MASS, parallel, phangorn, phytools, Rcpp,
RLumShiny, scatterD3, shiny, shinyBS, utils
adegenet, adegraphics, adephylo, combinat, compiler, distory,
fields, htmlwidgets, MASS, parallel, phangorn, phytools, Rcpp,
rgl, RLumShiny, scatterD3, shiny, shinyBS, utils
adegenet, adegraphics, adephylo, combinat, compiler, distory,
fields, htmlwidgets, MASS, methods, parallel, phangorn,
phytools, Rcpp, rgl, RLumShiny, scatterD3, shiny, shinyBS,
utils
shiny, RColorBrewer, spatstat.geom, spatstat.core, raster,
rasterVis, sp, geometry, maptools, rgdal, rgl, lidR, pryr, sf,
stars, rglwidget
shiny, RColorBrewer, spatstat.geom, spatstat.core, raster,
rasterVis, sp, geometry, rgdal, rgeos, rgl, lidR, pryr, sf,
stars
lattice (>= 0.20-23), ggplot2, data.table, base64enc, shiny
(>= 0.12.0), htmlwidgets (>= 0.5.0), digest, jsonlite, hexbin,
png, rsconnect
lattice (>= 0.20-23), ggplot2, data.table, base64enc, shiny
(>= 0.12.0), htmlwidgets (>= 0.5.0), digest, jsonlite, hexbin,
png, jpeg, DistributionUtils, htmltools, curl, rsconnect
dplyr, purrr, tidyr, grid, htmltools, DistributionUtils,
grDevices, gtable, digest, jsonlite, ggplot2 (> 2.1.0),
base64enc, htmlwidgets, graphics, progress, utils, knitr,
webshot, autocogs, rlang
dplyr, purrr, grid, htmltools, DistributionUtils, grDevices,
gtable, digest, jsonlite, ggplot2 (>= 3.2.1), base64enc,
htmlwidgets, graphics, progress, utils, knitr, webshot,
autocogs, tidyr, rlang
trending, yardstick, rsample, ellipsis, stats, tidyr, tibble
MASS, stats, utils, tibble, vctrs, dplyr
MASS, stats, utils, tibble, vctrs, ciTools,
gtrendsR, magrittr, dplyr, purrr, crayon, stringr, tibble
rstan (>= 2.12.1), rstantools (>= 1.1.0), gtools
rstan (>= 2.12.1), rstantools (>= 1.1.0), loo (>= 1.1.0),
gtools, stringr, dplyr, tidyr, magrittr, ggplot2
rstan (>= 2.18.1), rstantools (>= 1.1.0), loo (>= 1.1.0),
gtools, stringr, dplyr, tidyr, magrittr, ggplot2
rstan (>= 2.18.2), rstantools (>= 1.5.1), loo (>= 1.1.0),
dplyr, tidyr, magrittr, stringr, ggplot2, gtools
rstan (>= 2.18.2), rstantools (>= 1.5.1), dplyr, tidyr, purrr,
magrittr, stringr, ggplot2, gtools, coda, tidybayes, tibble
rstan (>= 2.18.2), rstantools (>= 1.5.1), rlang, dplyr, tidyr,
purrr, magrittr, stringr, ggplot2, gtools, coda, tidybayes,
tibble, binom, MASS
rstan (>= 2.18.2), rstantools (>= 1.5.1), rlang (>= 0.4.5),
dplyr, tidyr, purrr, magrittr, stringr, ggplot2, gtools, coda,
tidybayes (>= 2.0.3), tibble (>= 3.0.0), binom, MASS
rstan (>= 2.18.2), rstantools (>= 1.5.1), rlang (>= 0.4.5),
dplyr, purrr, magrittr, stringr, ggplot2, gtools, coda,
tidybayes (>= 2.0.3), tibble (>= 3.0.0), binom, MASS
bazar, dplyr, lazyeval, magrittr, rlist, rstudioapi
dplyr, lazyeval, magrittr, rlang, rstudioapi, utils
grDevices, ggplot2, ggtern, dplyr, shiny, assertthat
grDevices, ggplot2 (>= 3.0.0), ggtern (>= 3.0.0), dplyr,
shiny, assertthat
grDevices, ggplot2 (>= 3.0.0), ggtern (>= 3.0.0), shiny,
assertthat
grDevices, ggplot2 (>= 3.3.0), ggtern (>= 3.3.0), shiny,
assertthat
GA, gsDesign, gsrsb, ldbounds, mvtnorm, nleqslv, stats
GA, gsrsb, ldbounds, mvtnorm, nleqslv, stats
geodist, maptools, MASS, methods, raster, sp, spatstat, glue,
viridis
geodist, maptools, MASS, methods, raster, reproj, sp,
spatstat, glue, viridis, traipse, crsmeta
geodist, maptools, MASS, methods, raster, reproj, sp,
spatstat, glue, viridis, traipse (>= 0.2.0), crsmeta, dplyr,
rlang
geodist, MASS, methods, raster, reproj, sp, spatstat.geom,
spatstat.core, glue, viridis, traipse (>= 0.2.0), crsmeta,
dplyr, rlang
akima, lattice, locfit, mgcv, rgdal, sp, zoo
ggplot2, DALEX (>= 1.2), glmnet, ggdendro, patchwork
ggplot2, DALEX (>= 1.3), glmnet, ggdendro, patchwork
magrittr, dplyr, tibble, countrycode, tidyr, stringr,
readstata13, rlang, haven
digest, httr, magrittr, rvest, stats, stringr, utils, xml2
dplyr, tibble, readr, httr, htmltools, magrittr, stringr,
assertthat, scales, here
dplyr, zip, tibble, readr, data.table, httr, htmltools,
magrittr, stringr, assertthat, scales, here, rlang, lubridate,
hms, tidyr, tools
Formula, sandwich, grid, stats, variables, libcoin, utils
Formula, sandwich, grid, stats, variables, libcoin, utils,
grDevices
Rfast, cluster, doParallel, foreach, iterators, fpc, parallel
methods, Rcpp (>= 0.12.0), RcppParallel (>= 5.0.1), Rdpack,
rstan (>= 2.18.1), rstantools (>= 2.2.0), stats
dplyr, glue, httr, jsonlite, magrittr, tibble, tidygraph,
tidyselect (>= 1.0.0), urltools
dplyr, glue, httr, jsonlite, magrittr, progressr, tibble,
tidygraph, tidyselect (>= 1.0.0), urltools
ordinal, magrittr, dplyr, MASS, tibble, tidyr, stats, lme4,
readr, purrr, rmarkdown, emmeans, DT, Rdpack, ggplot2, forcats,
ez
Rcpp (>= 0.11.0), forecast, boot, parallel
Rcpp (>= 0.11.0), forecast, boot, parallel, xts, zoo
nnet, tseriesChaos, tseries, utils, vars, urca, methods
nnet, tseriesChaos, tseries, utils, vars, urca, methods,
forecast
mnormt, mgcv, nnet, tseriesChaos, tseries, utils, vars, urca,
methods, forecast, nlme, MASS, Matrix, foreach
mnormt, mgcv, nnet, tseriesChaos, tseries, utils, vars, urca,
forecast, MASS, Matrix, foreach
mnormt, mgcv, nnet, tseriesChaos, tseries, utils, vars, urca,
forecast, MASS, Matrix, foreach, methods
methods, stats, graphics, utils, zoo, xts, FKF, ltsa,
rvinecopulib, FitAR, arfima, Matrix
methods, stats, graphics, utils, stats4, zoo, xts, FKF, ltsa,
rvinecopulib, arfima, Matrix, kdensity
xts, RcppRoll, methods, ranger, glmnet, earth, kernlab,
Cubist, nnet, gbm, zoo, pls
xts, RcppRoll, methods, ranger, glmnet, earth, kernlab,
Cubist, nnet, gbm, zoo, pls, forecast, softImpute
xts, RcppRoll, methods, ranger, glmnet, earth, kernlab,
Cubist, nnet, gbm, zoo, pls, forecast, opera, softImpute
xts, RcppRoll, methods, ranger, glmnet, earth, kernlab,
Cubist, nnet, gbm, zoo, pls, forecast, opera, parallel,
doParallel, foreach, xgboost, softImpute
xts, zoo, RcppRoll, methods, ranger, glmnet, earth, kernlab,
Cubist, gbm, pls, monmlp, doParallel, foreach, xgboost,
softImpute
graphics, stats, utils, quadprog, zoo, quantmod (>= 0.4.9)
graphics, stats, utils, quadprog, zoo, quantmod (>= 0.4-9)
cubature, methods, parallel, stats, graphics
cubature, methods, parallel, stats, graphics, ks
ForeCA, fracdiff, forecast (>= 8.3), purrr, RcppRoll (>=
0.2.2), stats, tibble, tseries, urca, future, furrr
fracdiff, forecast (>= 8.3), purrr, RcppRoll (>= 0.2.2),
stats, tibble, tseries, urca, future, furrr
ggplot2 (>= 2.2.1), graphics, stats, utils
ggplot2 (>= 3.1.1), graphics, stats, utils
ggplot2 (>= 3.1.1), graphics, Rcpp, stats, utils
stats,graphics, methods, grDevices, utils, tcltk2, tcltk,
tkrplot
stats, graphics, methods, grDevices, utils, tcltk2, tcltk,
tkrplot, RandomFieldsUtils
rlang, tidyr, purrr, tibble (>= 1.4.1), pillar (>= 1.0.1),
lubridate, dplyr (>= 0.7.3), Rcpp (>= 0.12.3), tidyselect
rlang, tidyr, purrr (>= 0.2.3), tibble (>= 1.4.1), pillar (>=
1.0.1), lubridate, dplyr (>= 0.7.3), Rcpp (>= 0.12.3),
tidyselect
anytime, dplyr (>= 0.7.3), lubridate, purrr (>= 0.2.3), Rcpp
(>= 0.12.3), rlang (>= 0.2.0), tibble (>= 1.4.1), tidyr,
tidyselect
tsibble (>= 0.9.0), vctrs, rappdirs, utils
audio, doSNOW, parallel, foreach, magrittr
audio, doSNOW, parallel, foreach, progress, magrittr
audio, checkmate, doSNOW, foreach, magrittr, parallel,
progress, Rcpp, RcppParallel, RJSONIO
audio, checkmate, doSNOW, foreach, magrittr, parallel,
progress, Rcpp, RcppParallel (>= 5.0.0), RJSONIO
forecast, polynom, stsm, stsm.class, KFKSDS
BBmisc, checkmate (>= 1.5), fpc, vegan, stringr, splancs
glmnet, MASS, Matrix, mclust, quantreg, splines, textTinyR,
zoo
glmnet, MASS, Matrix, mclust, quantreg, Rdpack, splines,
textTinyR, zoo
utils, xts, zoo, timeDate, stats, dsa, tsbox
xts, stats, graphics, jsonlite, data.table,
xts, stats, graphics, jsonlite, data.table, yaml,
evd, mvtnorm, stats, MASS, graphics, tictoc
spatstat.geom, spatstat.core, spatstat.linnet, grDevices,
graphics, stats, Rcpp
spatstat.geom, spatstat.core, spatstat.random,
spatstat.linnet, grDevices, graphics, stats, Rcpp
spatstat.geom, spatstat.explore, spatstat.model,
spatstat.random, spatstat.linnet, grDevices, graphics, stats,
Rcpp
httr, plyr, dplyr, purrr, jsonlite, utils
htmltools, xfun (>= 0.13), knitr (>= 1.28), rmarkdown (>= 2.1)
htmltools, knitr (>= 1.28), rmarkdown (>= 2.11), xfun (>=
0.13)
htmltools, xfun, knitr (>= 1.18), rmarkdown
htmltools, xfun (>= 0.6), knitr (>= 1.22), rmarkdown (>= 1.12)
magrittr (>= 2.0.0), minqa, Rdpack, rootSolve (>= 1.8.2.1)
stats, pbkrtest, mgcv, lme4, nlme, Matrix
dplyr (>= 0.8.3), rlang (>= 0.4.0), tibble (>= 2.1.3), purrr
(>= 0.3.2), dials (>= 0.0.4), recipes (>= 0.1.9), utils,
ggplot2, glue, cli (>= 2.0.0), crayon, yardstick, rsample,
tidyr, GPfit, foreach, parsnip (>= 0.0.4), workflows (>=
0.1.0), hardhat (>= 0.1.0)
dplyr (>= 0.8.3), rlang (>= 0.4.0), tibble (>= 2.1.3), purrr
(>= 0.3.2), dials (>= 0.0.4), recipes (>= 0.1.9), utils,
ggplot2, glue, cli (>= 2.0.0), crayon, yardstick, rsample,
tidyr, GPfit, foreach, parsnip (>= 0.0.4), workflows (>=
0.1.0), hardhat (>= 0.1.0), lifecycle
dplyr (>= 0.8.5), rlang (>= 0.4.0), tibble (>= 2.1.3), purrr
(>= 0.3.2), dials (>= 0.0.4), recipes (>= 0.1.9), utils,
ggplot2, glue, cli (>= 2.0.0), crayon, yardstick, rsample,
tidyr, GPfit, foreach, parsnip (>= 0.0.4), workflows (>=
0.1.0), hardhat (>= 0.1.0), lifecycle, vctrs (>= 0.3.0)
coda, doParallel, foreach, lomb, mcmcplots, parallel, stats,
truncnorm
systemfit (>= 1.1-20), MASS, vars, bvarsv
systemfit (>= 1.1-20), MASS, vars, bvarsv, plm
gbm (>= 1.5-3), survey, xtable, lattice, latticeExtra,
MatrixModels, data.table, ggplot2, xgboost
twang, gbm (>= 1.5-3), gridExtra, graphics, stats, lattice,
latticeExtra, survey
twang, gbm (>= 1.5-3), graphics, stats, lattice, latticeExtra,
survey
Rcpp (>= 0.12.3), grDevices, farver, magrittr, rlang
ROAuth, streamR, RPostgreSQL, rgdal, sp, RSQLite, ggmap,
ggplot2, plyr
ROAuth, streamR, RPostgreSQL, rgdal, sp, RSQLite, ggmap,
ggplot2, plyr, spacetime, spatstat, splancs, maptools
purrr, httr, jsonlite, magrittr, lubridate
tibble, dplyr, crayon, rlang, stringr, stats
methods, graphics, stats, data.table, MASS
onewaytests, stats, ggplot2, nortest, car
dplyr, tidyr, forcats, magrittr, rlang, knitr
stats, stringr, data.table, assertthat, mvtnorm, hal9001 (>=
0.2.6), haldensify (>= 0.0.6), lspline, ggplot2, tibble,
latex2exp, Rdpack
stats, stringr, data.table, assertthat, mvtnorm, hal9001 (>=
0.2.6), haldensify (>= 0.0.6), lspline, ggplot2, tibble,
scales, latex2exp, Rdpack, cli
stats, stringr, data.table, assertthat, mvtnorm, hal9001 (>=
0.4.1), haldensify (>= 0.2.1), lspline, ggplot2, scales,
latex2exp, Rdpack
Rcpp (>= 1.0.2), methods, raster, sp, rgdal
Brobdingnag (>= 1.2-4), parallel, stats (>= 3.3.2)
Brobdingnag (>= 1.2-4), parallel, pbapply (>= 1.3-2), stats
(>= 3.3.2)
tcltk, tcltk2, tkrplot, HMM, clValid, class, cluster,
FactoMineR, corrplot, chron
stringr, sp, raster, htmlwidgets, htmltools, rgdal, rgeos,
gdalUtils, geosphere, tools, maptools, log4r, zoo, data.table,
spatial.tools, devtools, sf, roxygen2, methods
stringr, sp, raster, htmlwidgets, htmltools, rgdal, rgeos,
gdalUtils, geosphere, tools, maptools, log4r, zoo, data.table,
spatial.tools, devtools, sf, roxygen2, methods, brew
sp, sf, raster, rgdal, rgeos, geosphere, tools, log4r, zoo,
methods, brew, exifr, link2GI, data.table, jsonlite, rlist,
rlang
stringr, sp, raster, htmlwidgets, htmltools, Rcpp, rgdal,
rgeos, gdalUtils, geosphere, tools, maptools, log4r, igraph,
zoo, data.table, spatial.tools, devtools, sf, roxygen2,
link2GI, methods
sp, sf, raster, rgdal, rgeos, geosphere, tools, log4r, zoo,
methods, brew, exifr, link2GI, data.table, jsonlite, rlist
httr, lubridate, tibble, dplyr, tidyr, magrittr
httr, httpuv, jsonlite, ggmap, dplyr, googleway, ggplot2,
ggthemes
deSolve, digest, doParallel, doRNG, flextable, foreach,
gridExtra, grid, gdata, ggplot2, knitr, MASS, officer (>=
0.3.5), optimx, PKNCA, pso, rmarkdown, rhandsontable,
rstudioapi, stats, shiny,
deSolve, digest, doParallel, flextable, foreach, gridExtra,
grid, gdata, ggplot2, knitr, MASS, officer (>= 0.3.5), optimx,
PKNCA, pso, rmarkdown, rhandsontable, rstudioapi, stats,
stringr, shiny,
deSolve, digest, doParallel, flextable, foreach, gridExtra,
grid, gdata, ggplot2, knitr, MASS, officer (>= 0.3.7), optimx,
PKNCA, pso, rmarkdown, rhandsontable, rstudioapi, stats,
stringr, shiny,
deSolve, dplyr (>= 1.0.0), digest, doParallel, flextable,
foreach, gridExtra, grid, ggplot2, knitr, MASS, officer (>=
0.3.7), optimx, PKNCA, pso, readxl, rmarkdown, rhandsontable,
rstudioapi, stats, stringr, shiny,
deSolve, dplyr (>= 1.0.0), digest, doParallel, flextable,
foreach, gridExtra, grid, ggplot2, knitr, magrittr, MASS,
officer (>= 0.3.7), optimx, PKNCA, pso, readxl, rmarkdown,
rhandsontable, rstudioapi, scales, stats, stringr, shiny,
deSolve, dplyr (>= 1.0.0), digest, doParallel, flextable,
foreach, ggplot2, knitr, magrittr, MASS, onbrand (>= 1.0.1),
optimx, PKNCA, pso, readxl, rmarkdown, rhandsontable, scales,
stats, stringr, shiny,
ggplot2 (>= 2.0.0), gridExtra, lme4, loo, Matrix, methods,
Rcpp (>= 0.12.0), rstan (>= 2.18.1), rstantools (>= 2.0.0),
stats
ggplot2 (>= 2.0.0), gridExtra, lme4, loo, Matrix, methods,
pbapply, Rcpp (>= 0.12.0), RSpectra, rstan (>= 2.18.1),
rstantools (>= 2.0.0), stats
colorspace, dplyr, geometry, pracma, ptinpoly, rgl, remotes
Rcpp (>= 0.11.5), data.table (>= 1.9.6), Matrix, methods
Rcpp (>= 0.11.5), data.table (>= 1.9.6), Matrix, methods,
stats
esemifar, fracdiff, rugarch, smoots, stats, utils
DBI, RMySQL, data.table, collapse, writexl
Rcpp, stats, gamlss, gamlss.dist, pracma
Matrix, maxLik, mvtnorm, numDeriv, graphics, stats
dplyr, purrr, readr, ggplot2, XML, magrittr, grid, plyr,
tibble, tidyr, scales
dplyr, purrr, readr, ggplot2, XML, magrittr, grid, plyr,
tibble, tidyr, scales, stringr
dplyr, purrr, readr, ggplot2, XML, magrittr, grid, plyr,
tibble, tidyr, scales, stringr, data.table
dplyr, purrr, readr, ggplot2, XML, magrittr, grid, tibble,
tidyr, scales, stringr, data.table, foreach, parallel,
doParallel
data.table (>= 1.12), dplyr, purrr, readr, ggplot2, XML,
magrittr, grid, tibble, tidyr, scales, stringr, foreach,
parallel, doParallel
dplyr, purrr, readr, ggplot2, XML, magrittr, grid
magrittr, rio, RSelenium (>= 1.7.1), stringr, tools, utils
jsonlite, tibble, purrr, httr, snakecase
methods, reticulate, Rcpp (>= 0.12.6), RSpectra, stats
methods, openssl, reticulate, Rcpp (>= 0.12.6), RSpectra,
stats
Matrix, methods, openssl, reticulate, Rcpp (>= 0.12.6),
RSpectra, stats
formula.tools, utils, MASS, Matrix, methods, mvtnorm,
numDeriv, polycor, R2HTML, RCurl
utils, MASS, Matrix, methods, mvtnorm, numDeriv, polycor,
R2HTML, RCurl
utils, MASS, Matrix, methods, knitr, mvtnorm, numDeriv,
polycor, R2HTML, RCurl
DiagrammeR, knitr, MASS, Matrix, methods, mvtnorm, numDeriv,
polycor, R2HTML, RCurl, utils
DiagrammeR, knitr, MASS, Matrix, methods, mvtnorm, numDeriv,
polycor, R2HTML, RCurl, sfsmisc, utils
DiagrammeR, knitr, MASS, Matrix, methods, mvtnorm, nlme,
numDeriv, polycor, R2HTML, RCurl, sfsmisc, utils, xtable
cowplot, ggplot2, DiagrammeR, knitr, MASS, Matrix, mvtnorm,
nlme, numDeriv, polycor, R2HTML, RCurl, sfsmisc, xtable,
methods, utils
cowplot, DiagrammeR, lavaan, ggplot2, knitr, MASS, Matrix,
methods, MuMIn, mvtnorm, nlme, numDeriv, polycor, R2HTML,
RCurl, sfsmisc, utils, xtable
cowplot, DiagrammeR, ggplot2, knitr, MASS, Matrix, methods,
MuMIn, mvtnorm, nlme, numDeriv, polycor, R2HTML, RCurl,
sfsmisc, utils, xtable
cowplot, DiagrammeR, lavaan, ggplot2, knitr, MASS, Matrix,
methods, MuMIn, mvtnorm, nlme, polycor, R2HTML, RCurl, utils,
xtable
ggplot2, cowplot, DiagrammeR, DiagrammeRsvg, rsvg, lavaan,
MASS, Matrix, methods, MuMIn, mvtnorm, nlme, polycor, R2HTML,
RCurl, scales, utils, xtable, kableExtra, knitr
ggplot2, cowplot, DiagrammeR, DiagrammeRsvg, rsvg, lavaan,
MASS, Matrix, methods, MuMIn, mvtnorm, nlme, polycor, R2HTML,
RCurl, scales, utils, xtable, kableExtra, knitr, tibble
cowplot, DiagrammeR, ggplot2, kableExtra, knitr, lavaan, MASS,
Matrix, methods, MuMIn, mvtnorm, nlme, polycor, R2HTML, RCurl,
scales, utils, xtable
cowplot, DiagrammeR, DiagrammeRsvg, rsvg, ggplot2, kableExtra,
knitr, lavaan, MASS, Matrix, methods, MuMIn, mvtnorm, nlme,
polycor, R2HTML, RCurl, scales, utils, xtable
assertthat (>= 0.2.1), NlcOptim (>= 0.6), stats
XML, dplyr, purrr, tidyr, tibble, Rcpp (>= 0.12.15)
XML, dplyr, purrr, tidyr, tibble, Rcpp (>= 0.12.15), devtools,
R.utils
XML, dplyr, purrr, tidyr, tibble, Rcpp (>= 0.12.15), devtools,
usethis, R.utils
dplyr (>= 0.7.5), rlang (>= 0.2.1), forcats, stringr, tidyr,
magrittr, tidyxl, readxl, tibble
dplyr (>= 0.8.4), rlang (>= 0.2.1), forcats, stringr, tidyr,
magrittr, tidyxl, readxl, tibble
ggplot2 (>= 0.8.8), lattice (>= 0.19-17), RColorBrewer, grid
DoseFinding, MASS, mvtnorm, quadprog, SEL, splines
DoseFinding, graphics, MASS, parallel, stats, mvtnorm,
quadprog, SEL, splines
glue, methods, proceduralnames, R6, utils
httr, lubridate, dplyr, rlang, tibble, tidyr, ggplot2, scales,
ghql, jsonlite, patchwork, purrr, reticulate, utils
Rcpp, optimx, stats, quantreg, Formula, MASS, numDeriv
assertthat, extraDistr, tibble, logitnorm, actuar, nakagami
assertthat, extraDistr, tibble, logitnorm, actuar, nakagami,
fGarch
graphics, stats, utils, plyr, raster, Matrix
graphics, stats, utils, plyr, raster, Matrix, MASS
graphics, stats, utils, parallel, plyr, raster, Matrix, MASS,
Rcpp (>= 0.8.0)
graphics, lme4, MASS, Matrix, parallel, plyr, raster, Rcpp (>=
0.8.0), stats, TMB (>= 1.7.18), utils
graphics, lattice, lme4, MASS, Matrix, parallel, pbapply,
plyr, Rcpp (>= 0.8.0), stats, TMB (>= 1.7.18), utils
methods, lazyeval, magrittr, data.table (>= 1.9.7), dplyr,
dtplyr, purrr, tidyr, tibble
methods, lazyeval, magrittr, data.table (>= 1.9.7), dplyr,
dtplyr, purrr, tidyr, tibble, xml2
methods, rlang, magrittr, data.table (>= 1.9.7), dplyr,
dtplyr, purrr, tidyr, tibble, xml2
methods, rlang, magrittr, dplyr, forcats, purrr, tidyr,
pillar, tibble, cellranger, xml2
methods, rlang, magrittr, dplyr, forcats, purrr, tidyr,
pillar, tibble (>= 2.1.1), cellranger, xml2, tidyselect
R6, assertthat, lubridate, magrittr, stringr, tibble, tidyr,
purrr, dplyr, rlang
Rcpp (>= 0.11.5), doParallel, foreach, parallel, iterators
Rcpp (>= 0.12.10), doParallel, foreach, iterators
Brobdingnag (>= 1.1-8), partitions (>= 1.9-14), polynom
lavaan, magrittr, dplyr, tidyr, tibble, stats, purrr,
simstandard (>= 0.6.3), ggplot2, ggnormalviolin, rlang,
patchwork, scales, ragg, lifecycle
dplyr, ggnormalviolin, ggplot2, magrittr, purrr, rlang, stats,
tibble, tidyr
Rcpp (>= 0.12.16), RcppArmadillo, assertthat, foreach,
doParallel, ggplot2, ggthemes, stringr
Rcpp (>= 0.12.16), RcppArmadillo, assertthat, foreach,
doParallel, ggplot2, ggthemes, stringr, reshape2
Rcpp (>= 0.12.16), RcppArmadillo, assertthat, foreach,
doParallel, ggplot2, ggthemes, reshape2
Rcpp (>= 0.12.16), RcppArmadillo, assertthat, ggplot2,
ggthemes, reshape2, foreach, future, doFuture, doRNG, methods,
iterators
here, stringr, readxl, magrittr, readr, purrr, ggplot2, glue,
dplyr, librarian, openxlsx, knitr, beepr, tidytext, scales,
rmarkdown, textclean, sf, tgamtheme, crayon
data.table, futile.logger, httr, jsonlite, purrr, stringr,
uuid
data.table, futile.logger, httr, jsonlite, purrr, stringr,
uuid, utils
assertthat (>= 0.2.0), data.table, futile.logger, httr,
jsonlite, purrr, stringr, uuid, utils
assertthat (>= 0.2.0), data.table, futile.logger, httr,
jsonlite, purrr, stringr, utils, uuid
assertthat, httr, rjson, XLConnect, xlsx
utils, graphics, grDevices, stats, rgdal, png, jpeg
scales, httr, jsonlite, lubridate, tidyselect, dplyr,
magrittr, tibble, knitr, ggplot2, rlang, ggthemes
plyr, scales, dplyr, magrittr, stats, utils
plyr, dplyr, magrittr, stats, scales, utils
plyr, dplyr (>= 0.5.0), magrittr, purrr (>= 0.1.0), stats,
scales, utils
plyr, dplyr (>= 0.5.0), magrittr, purrr (>= 0.1.0), stats,
scales, utils, Matrix
plyr, dplyr (>= 0.5.0), magrittr, purrr (>= 0.1.0), stats,
scales, utils, Matrix, assertthat
grDevices, graphics, stats, utils, dplyr, readr
grDevices, graphics, stats, utils, dplyr
tune (>= 0.1.1), cli, recipes, rlang, purrr, dplyr, tidyr
tune (>= 0.1.2), cli, recipes (>= 0.1.15), rlang, purrr,
dplyr, tidyr
cli, clipr, dplyr, purrr, recipes (>= 0.1.15), rlang, tidyr,
tune (>= 0.1.2)
plyr, psych, pwr, fBasics, e1071, ltm, MBESS, foreign, knitr,
xtable, GGally, grid, lavaan
lavaan, psych, GGally, pwr, plyr, grid, fBasics, e1071, ltm,
MBESS, knitr, xtable, foreign
plyr, psych, pwr, fBasics, ltm, MBESS, SuppDists, GPArotation,
MASS, mosaic, foreign, car, knitr, xtable, GGally, grid, lavaan
grDevices, stats, utils, plyr, psych, pwr, fBasics, MBESS,
SuppDists, GPArotation, MASS, mosaic, foreign, car, SCRT,
knitr, xtable, GGally, grid, gridExtra, lavaan
grDevices, stats, utils, scales, plyr, psych, pwr, fBasics,
MBESS, SuppDists, GPArotation, MASS, mosaic, diptest, foreign,
car, SCRT, XML, knitr, xtable, pander, ggplot2, GGally, grid,
gridExtra, ggrepel, RColorBrewer, lavaan, rio
grDevices, stats, utils, scales, grid, rio, pwr, SuppDists,
plyr, psych, fBasics, MBESS, GPArotation, lavaan, MASS, mosaic,
diptest, car, SCRT, XML, knitr, xtable, pander, ggplot2,
GGally, gridExtra, ggrepel, RColorBrewer
grDevices, stats, utils, grid, scales, rio, pwr, SuppDists,
plyr, psych, fBasics, MBESS, GPArotation, lavaan, MASS, mosaic,
diptest, car, SCRT, XML, knitr, xtable, pander, data.tree,
DiagrammeR, ggplot2, GGally, gtable, gridExtra, ggrepel,
RColorBrewer
BiasedUrn, car, data.tree, DiagrammeR, diptest, digest,
fBasics, GGally, ggplot2, ggrepel, ggridges, gridExtra,
GPArotation, gtable, knitr, lavaan, lme4, MASS, MBESS,
minpack.lm, pander, plyr, psych, pwr, RColorBrewer, rio,
scales, SCRT, SuppDists, viridis, XML, xtable
BiasedUrn, car, data.tree, DiagrammeR, diptest, digest,
GGally, ggplot2, ggrepel, ggridges, gridExtra, GPArotation,
gtable, knitr, lavaan, lme4, MASS, MBESS, minpack.lm, pander,
plyr, psych, pwr, RColorBrewer, rio, scales, SCRT, SuppDists,
ufs (>= 0.0.1), viridis, XML, xtable
microservices (>= 0.1.2), purrr, usethis, withr
clipr, clisymbols, crayon, desc, digest, gh, git2r, rmarkdown,
rprojroot, rstudioapi, whisker, withr
backports, clipr, clisymbols, crayon, curl, desc, gh, git2r,
httr, rematch2, rmarkdown, rprojroot, rstudioapi, styler,
whisker
backports (>= 1.1.0), clipr, clisymbols, crayon, curl (>=
2.7), desc, gh, git2r, httr, rematch2, rmarkdown, rprojroot,
rstudioapi, styler, whisker
clipr (>= 0.3.0), clisymbols, crayon, curl (>= 2.7), desc, fs
(>= 1.2.0), gh, git2r (>= 0.23), glue, rlang, rprojroot (>=
1.2), rstudioapi, utils, whisker
clipr (>= 0.3.0), clisymbols, crayon, curl (>= 2.7), desc, fs
(>= 1.2.0), gh, git2r (>= 0.23), glue (>= 1.2.0), purrr, rlang,
rprojroot (>= 1.2), rstudioapi, stats, utils, whisker, withr,
yaml
clipr (>= 0.3.0), clisymbols, crayon, curl (>= 2.7), desc, fs
(>= 1.3.0), gh, git2r (>= 0.23), glue (>= 1.3.0), purrr, rlang,
rprojroot (>= 1.2), rstudioapi, stats, utils, whisker, withr,
yaml
clipr (>= 0.3.0), cli, crayon, curl (>= 2.7), desc, fs (>=
1.3.0), gh (>= 1.1.0), git2r (>= 0.23), glue (>= 1.3.0), purrr,
rematch2, rlang (>= 0.4.3), rprojroot (>= 1.2), rstudioapi,
stats, utils, whisker, withr, yaml
cli, clipr (>= 0.3.0), crayon, curl (>= 2.7), desc, fs (>=
1.3.0), gert (>= 1.0.2), gh (>= 1.2.0), glue (>= 1.3.0),
jsonlite, lifecycle, purrr, rappdirs, rlang (>= 0.4.3),
rprojroot (>= 1.2), rstudioapi, stats, utils, whisker, withr
(>= 2.3.0), yaml
cli, clipr (>= 0.3.0), crayon, curl (>= 2.7), desc, fs (>=
1.3.0), gert (>= 1.0.2), gh (>= 1.2.0), glue (>= 1.3.0),
jsonlite, lifecycle, purrr, rappdirs, rlang (>= 0.4.10),
rprojroot (>= 1.2), rstudioapi, stats, utils, whisker, withr
(>= 2.3.0), yaml
datasets, vroom, httr, tibble, utils, V8
datasets, vroom, httr, tibble, utils, V8, tidyselect
dplyr, httr, lubridate, purrr, readr, rlang (>= 1.0.0), tibble
tibble, utile.tools(>= 0.1.2), dplyr, tidyr, rlang, survival,
purrr
utile.tools (>= 0.2.0), tibble, magrittr, dplyr, tidyr, rlang,
survival, purrr
utile.tools (>= 0.2.0), tibble, dplyr, rlang, survival, purrr
utile.tools (>= 0.2.3), tibble, dplyr, rlang, survival, purrr
dplyr, methods, purrr, rlang, tidyselect, utile.tools (>=
0.2.5)
dplyr, purrr, rlang, tidyselect, utile.tools (>= 0.2.5)
tibble, dplyr, lubridate, rlang, glue, purrr, stringr,
survival
tibble, dplyr, lubridate, rlang, purrr, stringr
ggplot2, purrr, utile.tools (>= 0.2.0), gridExtra
ggplot2, purrr, utile.tools (>= 0.2.0), gridExtra, dplyr
dplyr, ggplot2 (>= 0.3.4), gridExtra, purrr
data.table, stringr, utils, stringdist, RCurl
data.table, stringr, utils, stringdist, RCurl, dplyr
parallel, doParallel, data.table, readr, stringr, biomaRt,
vcfR, Biostrings, dplyr, tidyr, keras, AnnotationHub,
ensembldb, AnnotationFilter, BiocGenerics, GenomicFeatures,
GenomicRanges, IRanges, foreach, rtracklayer, stats, utils,
xml2
Exact, geepack, plyr, survival, sandwich
DescTools, RColorBrewer, gmodels, haven, psych, stats,
ggplot2, tibble, tidyr, dplyr, magrittr, rio
Rcpp, methods, FNN, RSpectra, RcppAnnoy (>= 0.0.17), irlba
Rcpp, methods, FNN, RcppAnnoy (>= 0.0.17), irlba
Rcpp, methods, FNN, RSpectra, RcppAnnoy (>= 0.0.11),
RcppParallel, irlba
Rcpp, methods, FNN, RSpectra, RcppAnnoy (>= 0.0.11), irlba
jsonlite, httr, stringr, dplyr, purrr, magrittr
magrittr, httr, dplyr, readr, purrr, jsonlite
httr, purrr, jsonlite, dplyr, magrittr, tibble, tidyr, sf,
leaflet, ggplot2, htmltools, stringr, ggspatial, geojsonio,
rlang, Cairo
Rcpp, bit64, stringr, data.table, rmarkdown
dplyr, stringr, janitor, rlang, tidyselect, purrr, magrittr,
tidyr, tibble, gtools, listviewer, data.table, scales, utils,
BBmisc, framecleaner, badger, rlist
dplyr (>= 0.5.0), lazyeval, purrr, readr, stringr, tibble,
tidyr, broom, shiny, ggplot2,
dplyr (>= 0.5.0), lazyeval, readr, stringr, tibble, tidyr,
broom, ggplot2,
dplyr (>= 0.7.0), rlang, readr, stringr, tibble, broom,
ggplot2,
dplyr (>= 0.7.0), rlang, readr, stringr, tibble (>= 1.4.2),
broom, ggplot2
dplyr (>= 0.8.0), rlang, readr, stringr, tibble (>= 1.4.2),
broom, ggplot2
dplyr (>= 0.8.0), rlang, readr, Rcpp (>= 1.0.0), stringr,
tibble (>= 1.4.2), broom, ggplot2
broom, dplyr (>= 0.8.0), ggplot2, Rcpp (>= 1.0.0), readr,
rlang, rtracklayer, stringr, tibble (>= 1.4.2)
broom, cli, dplyr (>= 0.8.0), ggplot2, Rcpp (>= 1.0.0), readr,
rlang, rtracklayer, stringr, tibble (>= 1.4.2)
MASS, parallel, cowplot, ggplot2, reshape2
rstudioapi, testthat, utils, dplyr, stringr
stats, optimbase, psych, EFA.MRFA, GPArotation, PCovR,
moments, corpcor, lavaan, fungible
stats, optimbase, psych, EFA.MRFA, GPArotation, PCovR,
moments, corpcor, lavaan, fungible, semPlot
stats, psych, EFA.MRFA, GPArotation, PCovR, moments, corpcor,
lavaan, fungible, semPlot
MASS, dplyr, ggplot2, rlang, tidyverse, car, purrr, stats,
graphics, formula.tools, gplots
MASS, dplyr, ggplot2, rlang, tidyverse, car, purrr, stats,
graphics
MASS, dplyr, ggplot2, rlang, tidyverse, car, purrr, stats,
graphics, gplots
gdata, MASS, dplyr, ggplot2, rlang, tidyverse, car, purrr,
stats, graphics, formula.tools, gplots, rstatix, stringr
gdata, MASS, plm, dplyr, ggplot2, rlang, tidyverse, car,
purrr, stats, graphics, formula.tools, gplots, rstatix, stringr
quadprog, Matrix, MASS, CompQuadForm, RLRsim, SPA3G, mvtnorm,
nlme, stats
quadprog, Matrix, MASS, CompQuadForm, RLRsim, SPA3G, mvtnorm,
nlme, stats, utils, graphics
mvtnorm, alabama, Matrix, merDeriv, matrixcalc, anocva,
corpcor, quadprog, lme4, nlme, saemix, msm, foreach, methods,
doParallel, parallel
mvtnorm, alabama, Matrix, merDeriv, matrixcalc, anocva,
corpcor, quadprog, lme4, nlme, saemix, msm, foreach, methods,
doParallel, parallel, lmeresampler
mvtnorm, alabama, Matrix, merDeriv, anocva, corpcor, quadprog,
lme4, nlme, saemix, msm, foreach, methods, doParallel,
parallel, lmeresampler
mvtnorm, alabama, Matrix, merDeriv, anocva, corpcor, quadprog,
lme4, nlme, nlmeU, purrr, saemix, msm, foreach, methods,
doParallel, parallel
methods, stats, graphics, lattice, latticeExtra, Rcpp
methods, stats, graphics, lattice, latticeExtra
methods, Matrix, stats, graphics, lattice, latticeExtra, Rcpp
methods, Matrix, stats, graphics, lattice, latticeExtra, Rcpp,
nor1mix
RcppEigen, foreach, parallel, doParallel, doRNG, pesel
foreach, plyr, MASS, stats, utils, surveyplanning
foreach, plyr, MASS, stats, utils, surveyplanning, ggplot2,
pracma, graphics
foreach, data.table (>= 1.11.4), stringr, ggplot2, pracma,
graphics, plyr, MASS, stats, utils, surveyplanning
reshape2, foreach, lpSolve, plyr, gdata, MASS
reshape2, foreach, plyr, gdata, MASS, stringr
foreach, data.table (>= 1.12.6), MASS, stats, utils, stringr,
surveyplanning, laeken
reshape2, foreach, plyr, gdata, MASS, stats, utils
foreach, plyr, gdata, MASS, stats, utils
foreach, plyr, gdata, MASS, stats, utils, surveyplanning
stringr, dplyr, yaml, openxlsx, VennDiagram, assertthat,
magrittr, tools, utils, tidyr, doParallel, foreach
dplyr, magrittr, purrr, tidyr, stringr, glue, DT, rstudioapi,
rio
fields, sp, RandomFields, optimParallel (>= 0.8-1)
RandomFields, fields, optimParallel (>= 0.8-1), sp
RandomFields, optimParallel (>= 0.8-1), sp
DiceKriging, glmnet, lhs, mlr, mlrMBO, RandomFields,
optimParallel (>= 0.8-1), ParamHelpers, pbapply, smoof, sp
glmnet, lhs, mlr, mlrMBO, RandomFields, optimParallel (>=
0.8-1), ParamHelpers, pbapply, smoof, sp
glmnet, lhs, methods, mlr, mlrMBO, RandomFields, optimParallel
(>= 0.8-1), ParamHelpers, pbapply, smoof
glmnet, lhs, methods, mlr, mlrMBO, optimParallel (>= 0.8-1),
ParamHelpers, pbapply, smoof
glmnet, lhs, methods, mlr, mlrMBO, optimParallel (>= 0.8-1),
ParamHelpers, pbapply, smoof, spam
Rcpp, stats, gamlss, gamlss.dist, mvtnorm
VineCopula, stats, graphics, utils, mosum, mvtnorm
VineCopula, stats, graphics, mosum, mvtnorm
stats, utils, MASS, grDevices, colorspace, lmtest
ape, graphics, grDevices, memuse, methods, Rcpp, stats, utils
ape, dplyr, graphics, grDevices, magrittr, memuse, methods,
pinfsc50, Rcpp, stats, stringr, tidyr, utils, viridisLite
ape, dplyr, graphics, grDevices, magrittr, memuse, methods,
pinfsc50, Rcpp, stats, stringr, tibble, utils, vegan,
viridisLite
ape, dplyr, graphics, grDevices, magrittr, memuse, methods,
pinfsc50, Rcpp, stats, stringr, tidyr, utils, vegan,
viridisLite
ape, dplyr, graphics, grDevices, magrittr, memuse, methods,
pinfsc50, Rcpp, stats, stringr, tibble, tidyr, utils, vegan,
viridisLite
knitr, Rcpp (>= 1.0.0), RcppArmadillo (>= 0.8.0)
crul (>= 0.5.2), webmockr (>= 0.2.4), urltools, yaml, R6,
lazyeval, base64enc
crul (>= 0.5.2), httr, webmockr (>= 0.2.8), urltools, yaml,
R6, lazyeval, base64enc
crul (>= 0.7.0), httr, webmockr (>= 0.3.0), urltools, yaml,
R6, lazyeval, base64enc
crul (>= 0.7.0), httr, webmockr (>= 0.3.4), urltools, yaml,
R6, lazyeval, base64enc
crul (>= 0.7.0), httr, webmockr (>= 0.4.0), urltools, yaml,
R6, lazyeval, base64enc
crul (>= 0.8.4), httr, webmockr (>= 0.5.0), urltools, yaml,
R6, lazyeval, base64enc
crul (>= 0.8.4), httr, webmockr (>= 0.6.0), urltools, yaml,
R6, lazyeval, base64enc
crul (>= 0.8.4), httr, webmockr (>= 0.6.2), urltools, yaml,
R6, lazyeval, base64enc
crul (>= 0.8.4), httr, webmockr (>= 0.7.4), urltools, yaml,
R6, base64enc
crul (>= 0.8.4), httr, webmockr (>= 0.8.0), urltools, yaml,
R6, base64enc, rprojroot
stats, grid, graphics, methods, nlme, rpart, numDeriv, ucminf,
zoo, sandwich, strucchange
stats, grid, graphics, methods, nlme (>= 3.1-123), rpart,
numDeriv, ucminf, zoo, sandwich, strucchange
stats, grid, graphics, methods, nlme (>= 3.1-123), rpart,
formula.tools, numDeriv, ucminf, zoo, sandwich, strucchange
backports, ellipsis (>= 0.2.0), digest, glue, rlang (>=
0.4.0), zeallot
ellipsis (>= 0.2.0), digest, glue, rlang (>= 0.4.2)
ellipsis (>= 0.2.0), digest, glue, rlang (>= 0.4.5)
ellipsis (>= 0.2.0), digest, glue, rlang (>= 0.4.7)
proxy, splines, gridExtra, grDevices, methods, stats, utils
purrr (>= 0.2.0), R6, shiny, devtools, testthat (>= 1.0.0),
svglite (>= 1.2.0), grDevices, xml2, htmlwidgets (>= 0.6),
fontquiver (>= 0.2.0), gdtools (>= 0.1.1), Rcpp
purrr (>= 0.2.0), R6, shiny, devtools, testthat (>= 1.0.0),
svglite (>= 1.2.0), grDevices, xml2, htmlwidgets (>= 0.6),
fontquiver (>= 0.2.0), gdtools (>= 0.1.2), Rcpp
devtools, fontquiver (>= 0.2.0), gdtools (>= 0.1.2), glue,
grDevices, htmlwidgets (>= 0.6), purrr (>= 0.2.0), rlang, R6,
Rcpp, shiny, svglite (>= 1.2.0), testthat (>= 1.0.0), xml2
devtools, diffobj, fontquiver (>= 0.2.0), freetypeharfbuzz (>=
0.2.5), gdtools, glue, grDevices, htmlwidgets (>= 0.6),
htmltools, purrr (>= 0.2.0), rlang, R6, Rcpp, shiny, testthat
(>= 1.0.0), usethis (>= 1.4.0), xml2 (>= 1.0.0)
diffobj, glue, grDevices, htmltools, lifecycle, rlang,
testthat (>= 3.0.0), xml2 (>= 1.0.0)
diffobj, glue, grDevices, htmltools, lifecycle, rlang,
testthat (>= 3.0.3), xml2 (>= 1.0.0)
ggplot2, plyr, maptools, gridSVG, grid, rjson, GGally, Rook,
dplyr
ggplot2, plyr, gridSVG, grid, rjson, GGally, Rook, dplyr,
broom
ggplot2, plyr, gridSVG, grid, rjson, GGally, Rook, dplyr,
broom, maptools, sp
ggplot2, plyr, gridSVG, grid, rjson, GGally, Rook, dplyr,
broom, rgdal, maptools, rgeos, sp
ggplot2, plyr, gridSVG, grid, rjson, GGally, Rook, dplyr,
broom, rgdal, sp, maptools, rgeos, Rdpack
corrplot, gtools, grid, pander, purrr, reshape2, qgraph,
VennDiagram
iterators, spam, maps, fields, foreach, Rcpp
jsonlite, htmlwidgets (>= 0.6), htmltools, magrittr, digest,
tools, clipr, utils, webshot, base64, stats
jsonlite, htmlwidgets, assertthat, rlang, glue, magrittr,
shiny, htmltools
jsonlite, htmlwidgets, assertthat, rlang, glue, magrittr,
htmltools
jsonlite, htmlwidgets, assertthat, rlang, glue, magrittr,
htmltools, digest
jsonlite, htmlwidgets, assertthat, rlang, glue, magrittr,
htmltools, digest, utils
foreign, methods, plotKML, qdapRegex, sp, vegdata
foreign, methods, plotKML, qdapRegex, sp, stringi, vegdata
foreign, methods, knitr, qdapRegex, sp, stringi, vegdata
graphics, raster, rgeos, rgdal, stats, units
sp, graphics, raster, rgeos, rgdal, stats, units
sf, sp, data.table, graphics, stats, units, methods, eixport
sf, sp, data.table, graphics, stats, units, methods
sf, data.table, units, graphics, stats, methods
sf, data.table, units, graphics, stats, dotCall64
sf (>= 1.0.1), data.table, units, graphics, stats, dotCall64
sf (>= 1.0.1), data.table, units, graphics, stats, dotCall64,
cptcity, fields, grDevices
methods, Rcpp (>= 0.11.6), raster, rgeos, rgdal, sp
methods, Rcpp (>= 0.11.6), raster, rgeos, rgdal, sp, sf (>=
0.5-5)
htmltools, rlang, httr, stringr, magrittr, glue, assertthat,
utils
htmltools, httr, stringr, magrittr, glue, assertthat, utils,
lifecycle
Rcpp (>= 0.11.0), foreach, survival, MASS, Matrix,
VennDiagram, visNetwork, igraph, methods
Rcpp (>= 0.12.7), stringr, rgl, stats, grDevices, graphics,
utils
butcher, cli, glue, hardhat, httr, jsonlite, pins (>= 1.0.0),
plumber (>= 1.0.0), purrr, rapidoc, readr (>= 1.4.0), rlang,
tibble, vctrs, withr
butcher, cli, generics, glue, hardhat, httr, jsonlite, pins
(>= 1.0.0), plumber (>= 1.0.0), purrr, rapidoc, readr (>=
1.4.0), rlang, tibble, vctrs, withr
butcher, cli, curl, generics, glue, hardhat, httr, jsonlite,
lifecycle, pins (>= 1.0.0), plumber (>= 1.0.0), purrr, rapidoc,
readr (>= 1.4.0), renv, rlang, tibble, vctrs, withr
butcher, cli, curl, fs, generics, glue, hardhat, httr,
jsonlite, lifecycle, pins (>= 1.0.0), plumber (>= 1.0.0),
purrr, rapidoc, readr (>= 1.4.0), renv, rlang, tibble, vctrs,
withr
butcher, cli, fs, generics, glue, hardhat, httr, jsonlite,
lifecycle, magrittr (>= 2.0.3), pins (>= 1.0.0), plumber (>=
1.0.0), purrr, rapidoc, readr (>= 1.4.0), renv, rlang, tibble,
vctrs, withr
butcher, cli, fs, generics, glue, hardhat, httr, jsonlite,
lifecycle, magrittr (>= 2.0.3), pins (>= 1.0.0), plumber (>=
1.0.0), purrr, rapidoc, readr (>= 1.4.0), renv, rlang (>=
1.0.0), tibble, vctrs, withr
bundle, butcher, cli, fs, generics, glue, hardhat, lifecycle,
magrittr (>= 2.0.3), pins (>= 1.0.0), plumber (>= 1.0.0),
purrr, rapidoc, readr (>= 1.4.0), renv, rlang (>= 1.0.0),
tibble, vctrs, withr
stringr, tis, lubridate, maptools, plyr, xts, scales
Rcpp (>= 1.0.1), lme4, CholWishart, mvtnorm, Matrix, stats,
graphics, methods, lmtest, splines, mgcv
Biostrings, coRdon , ggplot2, seqinr, stringr
utf8, crul, jsonlite, assertthat, magrittr, stringr, tibble,
tidyr, purrr, dplyr, rlang
cowplot, DT, ggplot2, grDevices, ggpubr, nlme, shiny, stats,
tidyr, utils
cowplot, DT, ggplot2, grDevices, ggpubr, nlme, numDeriv,
shiny, stats, stringr, tidyr, utils
shiny (>= 1.6.0), shinyjs, shinythemes, shinyWidgets,
shinydashboard, config (>= 0.3.1), golem (>= 0.3.1), JBrowseR,
dplyr, tidyr, DT, ggplot2, ggpubr, plotly, vroom, abind,
reshape2, markdown, stats, rlang
shiny (>= 1.6.0), shinyjs, shinythemes, shinyWidgets,
shinydashboard, config (>= 0.3.1), golem (>= 0.3.1), JBrowseR,
dplyr, tidyr, DT, ggplot2, ggpubr, plotly, vroom, abind,
reshape2, markdown, stats
shiny (>= 1.6.0), shinyjs, shinythemes, shinyWidgets,
shinydashboard, config (>= 0.3.1), golem (>= 0.3.1), JBrowseR,
dplyr, tidyr, DT, ggplot2, ggpubr, plotly, vroom, abind,
reshape2, markdown, stats, curl
data.table, raster, lidR, rgl, pracma, viridis, utils, nabor,
sp, plotrix, hyper.fit, stats, pkgcond
SuperLearner, stats, dplyr, magrittr, ROCR, tibble, rlang
SuperLearner, stats, dplyr, magrittr, ROCR, tibble, rlang,
MASS
SuperLearner, stats, dplyr, magrittr, ROCR, tibble, rlang,
MASS, boot, data.table
PCAmixdata, ggplot2, Polychrome, mclust, rlang
cctools, rvinecopulib (>= 0.2.8), doParallel, parallel,
foreach, kde1d (>= 0.2.0),
cctools, rvinecopulib (>= 0.2.8), future, furrr, kde1d (>=
0.2.0),
cctools, rvinecopulib (>= 0.3.0), future, furrr, kde1d (>=
0.2.0),
rvinecopulib (>= 0.5.0.1.0), kde1d (>= 1.0.2), Rcpp,
assertthat
rvinecopulib (>= 0.5.4.1.0), kde1d (>= 1.0.2), Rcpp,
assertthat
rvinecopulib (>= 0.6.1.1.2), kde1d (>= 1.0.2), Rcpp,
assertthat
dplyr, ggplot2 (>= 0.9.0), gridExtra, magrittr, pdp, plyr,
stats, tibble, tidyr, utils
ggplot2 (>= 0.9.0), gridExtra, ModelMetrics, pdp, plyr, stats,
tibble, utils
ggplot2 (>= 0.9.0), gridExtra, magrittr, ModelMetrics, pdp,
plyr, stats, tibble, utils
ggplot2 (>= 0.9.0), gridExtra, magrittr, plyr, stats, tibble,
utils
stats, grDevices, ggplot2 (>= 1.0.1), gridExtra
shiny (>= 1.3.2), shinyWidgets, plyr, ggplot2, shinydashboard,
DT, reshape, rbokeh, Biostrings, Rsamtools, data.table,
markdown, stringr, shinycssloaders
shiny (>= 1.3.2), shinyWidgets, ggplot2, shinydashboard, DT,
rbokeh, Biostrings, Rsamtools, data.table, markdown, stringr,
shinycssloaders
ggplot2, cowplot, viridis, mgcv, plyr, tidyr, stats
ade4, dismo, graphics, grDevices, methods, rworldmap, stats,
utils
ade4, graphics, grDevices, methods, rworldmap, sp, stats,
utils
odbc, processx, DBI, utils, ini, rappdirs, curl, fs, digest,
ps
htmlwidgets, htmltools, rjson, magrittr, utils
htmlwidgets, htmltools, jsonlite, magrittr, utils
htmlwidgets, htmltools, jsonlite, magrittr, utils, methods
htmlwidgets, htmltools, jsonlite, magrittr, utils, methods,
grDevices, stats
broom, DT, survival, magrittr, ggplot2, tidyr, dplyr,
kableExtra, gt (>= 0.1.0), tidyselect, parcats (>= 0.0.1),
cowplot, gtable, gridExtra, rlang
broom (>= 0.7.11), cowplot, dplyr (>= 1.0.0), ggplot2,
gridExtra, gtable, kableExtra, rlang (>= 1.0.0), survival,
tidyr (>= 1.0.0)
broom (>= 0.7.11), cowplot, dplyr (>= 1.0.0), ggplot2,
gridExtra, gtable, kableExtra, rlang (>= 1.0.0), survival (>=
3.4-0), tidyr (>= 1.0.0)
vcd, Cairo, graphics, grDevices, grid, multcompView, stats,
utils, nortest
ggplot2, ggpmisc, methods, Matrix, reshape2, RColorBrewer
Rglpk, e1071, kernlab, Matrix, mboost, randomForest, stats,
xgboost
doParallel (>= 1.0.15), grDevices, foreach, parallel, scales,
plotrix, Rdpack, Rcpp
ggplot2, tidyr, dplyr, purrr, magrittr, stats
ggplot2, tidyr, dplyr, purrr, readr, plotly (>= 4.5.6),
magrittr, stats, tibble, rlang (>= 0.2.0)
ggplot2, tidyr, dplyr, purrr, readr, magrittr, stats, tibble,
glue
stats, utils, grid, flip (>= 2.1), matrixStats, Hmisc, gtools,
deldir, spatstat
stats, utils, grid, flip (>= 2.1), matrixStats, Hmisc, gtools,
deldir, spatstat.geom
Hmisc, dplyr, polyclip, deldir, plotrix, gtools, combinat,
XML, oro.dicom, rlang, shiny, shinyjs, DT, htmlTable, boot,
pracma
gbm, randomForest, nnet (>= 7.3.12), e1071, MASS (>=
7.3.51.4), magrittr, FactoMineR (>= 2.3), ggplot2 (>= 3.3.0),
mltools, dplyr, data.table, MBA, pROC, ggrepel
shiny, shinyBS, ggplot2, plot3D, readxl, WriteXLS, DT, psych,
pracma, plyr, grid, svglite, Cairo, Rdpack
shiny, shinyBS, ggplot2, plot3D, MASS, ggdendro, ggrepel,
readxl, WriteXLS, DT, psych, pracma, Rtsne, plyr, grid,
svglite, Cairo, Rdpack
shiny, shinyBS, stats, ggplot2, plot3D, MASS, ggdendro,
ggrepel, readxl, WriteXLS, DT, psych, pracma, Rtsne, plyr,
grid, svglite, Cairo, Rdpack
shiny, shinyBS, splitstackshape, stats, ggplot2, plot3D, MASS,
ggdendro, ggrepel, readxl, WriteXLS, DT, psych, pracma, Rtsne,
plyr, grid, svglite, Cairo, Rdpack
shiny, shinyBS, splitstackshape, stats, tidyr, PBSmapping,
formattable, ggplot2, plot3D, MASS, ggdendro, ggrepel, readxl,
WriteXLS, DT, psych, pracma, Rtsne, plyr, grid, svglite, Cairo,
Rdpack
shiny, shinyBS, splitstackshape, stats, tidyr, PBSmapping,
formattable, ggplot2, plot3D, MASS, ggdendro, ggrepel, readxl,
WriteXLS, DT, psych, pracma, Rtsne, plyr, grid, svglite, Cairo,
tikzDevice, shinybusy, Rdpack
shiny, shinyhelper, shinycssloaders, bsplus, DT, ggplot2,
dplyr, readr, tidyr, cluster, fastcluster, clusterCrit,
dunn.test, RColorBrewer, dendextend, ComplexHeatmap, circlize,
patchwork, knitr, kableExtra
bookdown, rlang, glue, dplyr, rmarkdown, knitr, RefManageR
bookdown, rlang, glue, dplyr, rmarkdown (>= 1.18), knitr,
xfun, RefManageR
rlang, glue, dplyr, rmarkdown (>= 1.18), knitr, xfun, yaml,
tibble, vctrs, pillar
rlang, glue, dplyr, rmarkdown (>= 2.2), knitr, xfun, yaml,
tibble, vctrs (>= 0.3.3), pillar
rlang, glue, dplyr, rmarkdown (>= 2.2), knitr, xfun, yaml,
tibble, vctrs (>= 0.3.3), pillar, jsonlite
dplyr, stats, utils, tidyr, tidyselect (>= 1.0.0), magrittr,
ggplot2, DT, reshape2, scales, ggrepel, purrr, data.table
condvis2, ggplot2, GGally, RColorBrewer, colorspace, stats,
DendSer, ggalt, dplyr, igraph, flashlight, ggnewscale, tidyr
dplyr, tidyr, glue, htmlwidgets, magrittr, stats, stringr
dplyr, htmlwidgets, magrittr, stats, stringr
graphics, httr, jsonlite, stats, utils, XML
graphics, httr, purrr, jsonlite, stats, utils, XML
Rcpp (>= 0.12.12), checkmate, magrittr, dplyr, tidyr
Rcpp (>= 0.12.12), ggplot2 (>= 2.1), magrittr, reshape2,
scales, R6
ggplot2, readr, stringr, tidyr, purrr, ggpubr, imager, av,
tools, dplyr, rlang, foreach, magrittr, graphics, stats, utils,
pracma, crayon, svDialogs, pdftools, doFuture, progressr,
future, scales, tcltk
marmap, intervals, methods, plotrix, sp, foreign, cluster,
cairoDevice, ggplot2, DBI, RSQLite, fields, gsubfn, AMORE,
ecodist, gWidgets, gWidgetsRGtk2, chron, maptools, outliers,
PBSmapping, R6, grid, VennDiagram, gmt
marmap, intervals, methods, plotrix, sp, foreign, cluster,
cairoDevice, ggplot2, DBI, RSQLite, fields, gsubfn, AMORE,
ecodist, gWidgets2, gWidgets2RGtk2, chron, maptools, outliers,
PBSmapping, R6, grid, VennDiagram, gmt
dplyr, R.utils, reticulate, seewave, tibble, tidyselect,
tuneR, wrassp, zoo
plotly, ggplot2, ggpubr, ggrepel, methods
plotly, ggplot2, ggpubr, htmlwidgets, magrittr, methods,
Rfast, matrixTests
plotly, ggplot2, ggpubr, htmlwidgets, magrittr, methods,
Rfast, rlang, matrixTests
dplyr, dismo, fields, ggplot2, ggtext, grDevices,
latticeExtra, methods, raster, rangeBuilder, rgeos, terra,
viridisLite, sp
dplyr, dismo, fields, ggplot2, ggtext, grDevices, lattice,
latticeExtra, methods, raster, rangeBuilder, rgeos, terra,
viridisLite, sp
dplyr, dismo, fields, ggplot2, ggtext, grDevices,
latticeExtra, methods, raster, rangeBuilder (>= 2.0), terra,
viridisLite, sf
betareg, data.table, ggplot2, glmulti, gtools (>= 3.4.2),
GGally (>= 1.3.0), irr, plyr, R.utils, stringr, vortexRdata (>=
1.0.3)
betareg, data.table, ggplot2, glmulti, gtools (>= 3.4.2),
GGally (>= 1.3.0), irr (>= 0.84.1), plyr, R.utils, stringr,
vortexRdata (>= 1.0.3)
betareg, data.table, ggplot2, glmulti, gtools (>= 3.4.2),
GGally (>= 1.5.0), irr (>= 0.84.1), plyr, R.utils, stringr,
vortexRdata (>= 1.0.3)
dplyr, httr, jsonlite, magrittr, openssl, rlang, stringr,
tibble, tidyr
dplyr, httr, jsonlite, openssl, rlang, stringr, tibble, tidyr
dplyr, httr, jsonlite, openssl, progress, rlang, stringr,
tibble, tidyr
tm, stringr, RCurl, igraph (>= 1.2.2), Hmisc, data.table,
httpuv, methods, httr, magrittr, dplyr (>= 0.7.8), rlang (>=
0.3.0.1), RedditExtractoR (>= 2.1.2), rtweet (>= 0.6.8)
tm, stringr, RCurl, igraph (>= 1.2.2), Hmisc, data.table,
httpuv, methods, httr, magrittr, dplyr (>= 0.7.8), rlang (>=
0.3.0.1), RedditExtractoR (>= 2.1.2), rtweet (>= 0.6.8),
textutils, tictoc
data.table, dplyr (>= 0.7.8), Hmisc, httpuv, httr, igraph (>=
1.2.2), jsonlite, lubridate, magrittr, methods, purrr, RCurl,
rlang (>= 0.3.0.1), rtweet (>= 0.6.8), stats, stringr,
textutils, tibble, utils
tm, stringr, RCurl, igraph (>= 1.2.2), Hmisc, data.table,
httpuv, methods, httr, magrittr, dplyr (>= 0.7.8), tibble,
rlang (>= 0.3.0.1), RedditExtractoR (>= 2.1.2), rtweet (>=
0.6.8), textutils, tictoc, stats, purrr
data.table, dplyr (>= 1.0), httr (>= 1.3.0), jsonlite,
lubridate, methods, purrr, rlang (>= 1.0), stringr, textutils,
tidyr, tibble
classInt, dplyr, reshape2, MASS, survival, ggplot2, readr
classInt, dplyr, MASS, survival, ggplot2, readr, stringr,
tidyr
ggplot2, oce, dplyr, interp, magick, gsw, tidyr, stringr,
metR, gridExtra, lubridate, usethis
ggplot2, oce, dplyr, interp, magick, gsw, tidyr, stringr,
metR, gridExtra, lubridate, cmocean, withr, usethis
RColorBrewer, gtools, stringr, plyr, scales, graphics,
grDevices
doParallel, foreach, iterators, parallel, knitr, dplyr, qtl,
dglm, evd, ggplot2, gtools, lazyeval, stringr, tidyr, testthat
doParallel, foreach, iterators, parallel, knitr, dplyr, qtl,
dglm, evd, ggplot2, gtools, lazyeval, stringr, tidyr, testthat,
hglm, purrr
doParallel, foreach, iterators, parallel, knitr, dplyr, dglm,
evd, ggplot2, gtools, lazyeval, stringr, tidyr, testthat, hglm,
purrr, qtl
doParallel, foreach, iterators, parallel, knitr, dplyr, dglm,
evd, ggplot2, gtools, lazyeval, stringr, tidyr, testthat,
purrr, qtl
graphics, ica (>= 1.0), lpSolveAPI (>= 5.5.2.0), nnls,
parallel (>= 3.5.1), quadprog (>= 1.5), stats
graphics, ica (>= 1.0), lpSolveAPI (>= 5.5.2.0), Matrix, nnls,
parallel (>= 3.5.1), quadprog (>= 1.5), stats
crayon, glue, hms, Rcpp (>= 0.12.18.3), rlang, tibble (>=
2.0.0), tidyselect, withr
bit64, crayon, glue, hms, lifecycle, Rcpp (>= 0.12.18.3),
rlang (>= 0.4.2), tibble (>= 2.0.0), tidyselect, withr
bit64, crayon, glue, hms, lifecycle, Rcpp (>= 0.12.18.3),
rlang (>= 0.4.2), stats, tibble (>= 2.0.0), tidyselect, withr
bit64, crayon, glue, hms, lifecycle, rlang (>= 0.4.2), stats,
tibble (>= 2.0.0), vctrs, tidyselect, withr
bit64, crayon, glue, hms, lifecycle, rlang (>= 0.4.2), stats,
tibble (>= 2.0.0), vctrs (>= 0.2.0), tidyselect, withr
bit64, crayon, cli, glue, hms, lifecycle, methods, rlang (>=
0.4.2), stats, tibble (>= 2.0.0), tzdb (>= 0.1.1), vctrs (>=
0.2.0), tidyselect, withr
bit64, cli (>= 3.2.0), crayon, glue, hms, lifecycle, methods,
rlang (>= 0.4.2), stats, tibble (>= 2.0.0), tidyselect, tzdb
(>= 0.1.1), vctrs (>= 0.2.0), withr
dplyr, survminer, flexsurv, magrittr, ggpubr, muhaz
ggplot2, glue, invertiforms, LRMF3, magrittr, Matrix, rlang,
RSpectra, stats, tibble, withr
R6, httr, RCurl, magrittr, jsonlite, xml2
utils, stats, rstudioapi, sjlabelled, haven
utils, stats, rstudioapi, sjlabelled, haven, knitr
DiagrammeR, DiagrammeRsvg, rsvg, htmlwidgets, shiny
DiagrammeR, DiagrammeRsvg, rsvg, htmlwidgets, shiny, utf8
data.table, igraph, magrittr, plyr, parallel, som, visNetwork
data.table, igraph, magrittr, plyr, parallel, som, visNetwork,
reshape2
data.table, igraph, magrittr, plyr, parallel, som, visNetwork,
reshape2, shiny
data.table, igraph, magrittr, plyr, parallel, som, visNetwork,
reshape2, Rfast, HiClimR, methods
xgboost, tokenizers, text2vec, R6, utils, tibble, ggplot2,
stats, Matrix
RColorBrewer, grid, gridExtra, gtable, extrafont
R6, shiny, crayon, magrittr, htmltools, rstudioapi
freesurferformats (>= 0.1.12), imager, jpeg, png, spacesXYZ
cli, diffobj, fansi, glue, methods, rematch2, rlang, tibble
cli, diffobj, fansi, glue, methods, rematch2, rlang (>=
0.4.10), tibble
cli, diffobj (>= 0.3.4), fansi, glue, methods, rematch2, rlang
(>= 0.4.10), tibble
cli, diffobj (>= 0.3.4), fansi, glue, methods, rematch2, rlang
(>= 1.0.0), tibble
httr, dplyr, stringr, purrr, tibble, base64enc, sp
bayesplot, coda, dplyr, Hmisc, ggplot2, KFAS, methods, rlang,
rstantools (>= 2.0.0)
coda, dplyr, Hmisc, ggplot2, KFAS, methods, rlang, rstantools
(>= 2.0.0)
coda, dplyr, Hmisc, ggplot2, KFAS, loo, methods, rlang,
rstantools (>= 2.0.0)
coda, dplyr, Hmisc, ggplot2, KFAS, loo, methods, RcppParallel,
rlang, rstantools (>= 2.0.0)
hitandrun, limSolve, MASS, Rcpp (>= 0.11.6), shinystan
DT (>= 0.2), shinyjs, shinyBS, spocc (>= 0.5.4), RColorBrewer,
rmarkdown, dplyr, spThin, ENMeval, rgeos, maptools, dismo,
raster, shinythemes, magrittr
DT (>= 0.2), shinyjs, shinyBS, spocc (>= 0.5.4), RColorBrewer,
rmarkdown, dplyr, spThin, ENMeval, rgeos, maptools, dismo,
raster, shinythemes, magrittr, devtools, rgdal
DT (>= 0.2), shinyjs, spocc (>= 0.5.4), RColorBrewer, dplyr,
spThin, ENMeval, rgeos, maptools, dismo, raster, shinythemes,
magrittr, rgdal, leaflet.extras
DT (>= 0.2), shinyjs, spocc (>= 0.5.4), RColorBrewer, dplyr,
spThin, ENMeval, rgeos, maptools, dismo, raster, shinythemes,
magrittr, rgdal, leaflet.extras, XML, rmarkdown, testthat
DT (>= 0.4), shinyjs, spocc (>= 0.8.0), RColorBrewer, dplyr,
spThin, ENMeval (>= 0.3.0), rgeos, maptools, dismo, raster,
shinythemes, magrittr, rgdal, leaflet.extras, XML, rmarkdown,
testthat, zip
DT (>= 0.4), shinyjs, spocc (>= 0.8.0), RColorBrewer, dplyr,
spThin, ENMeval (>= 0.3.0), rgeos, maptools, dismo, raster,
shinythemes, magrittr, rgdal, leaflet.extras, XML, rmarkdown,
testthat, zip, rgbif (>= 3.3.0)
DT (>= 0.4), shinyjs, spocc (>= 0.8.0), RColorBrewer, dplyr,
spThin, ENMeval (>= 0.3.0), rgeos, maptools, dismo, raster,
shinythemes, magrittr, rgdal, leaflet.extras, XML, rmarkdown,
zip
dismo, dplyr, DT (>= 0.4), ENMeval (>= 2.0.0), jsonlite,
leaflet.extras, magrittr, raster, RColorBrewer, rgeos, rgdal,
rmarkdown, shinyjs, shinythemes, sp, spocc (>= 0.8.0), spThin,
zip
dismo, dplyr, DT (>= 0.4), ecospat, ENMeval (>= 2.0.0),
jsonlite, leaflet.extras, magrittr, raster, RColorBrewer,
rgeos, rgdal, rmarkdown, shinyjs, shinythemes, sp, spocc (>=
0.8.0), spThin, zip
dismo, dplyr, DT (>= 0.4), ecospat, ENMeval (>= 2.0.0),
jsonlite, leaflet.extras, magrittr, raster, RColorBrewer,
rgeos, rgdal, rmarkdown, shinyjs, sp, spocc (>= 0.8.0), spThin,
zip
stats, riskRegression (>= 1.0.8), data.table (>= 1.10.4)
glue, purrr, httr, tibble, magrittr, stringr, dplyr
dplyr, purrr, rappdirs, stats, stringi, tibble, tidyr, utils,
Rcpp
rjson, pbapply, RCurl, fftw, utils, stats, grDevices, graphics
rjson, pbapply, RCurl, fftw, utils, stats, grDevices,
graphics, dtw, parallel
bitops, doParallel, dtw, fftw, foreach, graphics, grDevices,
iterators, jpeg, monitoR, parallel, pbapply, pbmcapply, proxy,
RCurl, rjson, stats, signal, utils, methods
bitops, doParallel, dtw, fftw, foreach, graphics, grDevices,
iterators, jpeg, monitoR, parallel, pbapply, pbmcapply, proxy,
RCurl, rjson, stats, signal, utils, methods, pracma,
Sim.DiffProc
bitops, dtw, fftw, graphics, grDevices, iterators, jpeg,
monitoR, parallel, pbapply, RCurl, rjson, stats, utils,
methods, pracma, Sim.DiffProc
bitops, dtw, fftw, graphics, grDevices, iterators, jpeg,
monitoR, parallel, pbapply, RCurl, rjson, stats, utils,
methods, pracma, Sim.DiffProc, soundgen, bioacoustics
bitops, dtw, fftw, graphics, grDevices, iterators, jpeg,
monitoR, parallel, pbapply, RCurl, rjson, stats, utils,
methods, pracma, Sim.DiffProc, soundgen
dtw, fftw, graphics, grDevices, monitoR, parallel, pbapply,
RCurl, rjson, stats, utils, methods, pracma, Sim.DiffProc, maps
rjson, pbapply, RCurl, fftw, utils, stats, grDevices, foreach,
doParallel, graphics, dtw, parallel
dtw, fftw, graphics, grDevices, monitoR, parallel, pbapply,
RCurl, rjson, stats, utils, methods
dtw, fftw, graphics, grDevices, monitoR, parallel, pbapply,
RCurl, rjson, stats, utils, methods, Rcpp, huxtable, crayon,
bioacoustics
dtw, fftw, graphics, grDevices, monitoR, parallel, pbapply,
RCurl, rjson, stats, utils, methods, Rcpp, knitr, crayon,
bioacoustics, stringi
rjson, pbapply, RCurl, fftw, utils, stats, grDevices, foreach,
doParallel, graphics, dtw, parallel, jpeg
rjson, pbapply, RCurl, fftw, utils, stats, grDevices, foreach,
doParallel, pbmcapply, graphics, dtw, parallel, jpeg, monitoR
bitops, doParallel, dtw, fftw, foreach, graphics, grDevices,
iterators, jpeg, monitoR, parallel, pbapply, proxy, RCurl,
rjson, stats, signal, utils
dplyr, purrr, rlang, curl, httr, xml2, XML (>= 3.99-0.5)
lattice, latticeExtra, XML, xml2, lubridate, dataRetrieval
lattice, latticeExtra, xml2, lubridate, dataRetrieval
methods, raster, rgdal, purrr, caret, vctrs, magrittr, dplyr
methods, raster, rgdal, purrr, caret, vctrs, magrittr, dplyr,
pingr
abind, colorRamps, fields, Matrix, parallel, zoo
data.table (>= 1.9.7), caTools, minpack.lm, flux, raster (>=
2.8.0), rgdal (>= 1.3.0), sp, rgeos (>= 0.3.8), sqldf,
splitstackshape, reshape2
data.table, caTools, minpack.lm, flux, raster, rgdal, sp,
rgeos, sqldf, splitstackshape, reshape2
geosphere (>= 1.5), methods, rgeos (>= 0.3)
dplyr, prospectr, spectacles, caret, pls, randomForest,
wesanderson, magrittr, tidyselect, ggplot2, tidyr (>= 1.0),
stringr, rlang
caret, dplyr, ggplot2, lifecycle, magrittr, pls, prospectr,
randomForest, readr, rlang, scales, spectacles, stringr,
tibble, tidyr (>= 1.0), tidyselect
fields, glue, hardhat, Matrix, purrr, rlang, rsample, sf,
spdep, stats, tibble, yardstick
dplyr, httr, jsonlite, lifecycle, lubridate, readr, stringr,
tibble, tidyr
dplyr, httr, jsonlite, lifecycle, lubridate, readr, rlang,
stringr, tibble, tidyr, magrittr
dplyr, magrittr, tidyr, progress, countrycode, tibble, purrr,
stringr, readr, forcats, tidyverse, lemon
dplyr, magrittr, tidyr, progress, countrycode, tibble, purrr,
stringr, readr, forcats, utils
dplyr, magrittr, tidyr, progress, countrycode, tibble, purrr,
stringr, readr, forcats
binman, assertthat, subprocess (>= 0.8.0), yaml, semver(>=
0.2.0)
binman, assertthat, subprocess (>= 0.8.0), yaml, semver(>=
0.2.0), utils
binman, assertthat, processx, yaml, semver(>= 0.2.0), utils
stats, igraph, wdm, Rcpp, rARPACK, Matrix, CVXR
CVXR, igraph, Matrix, rARPACK, Rcpp, RcppXPtrUtils, stats, wdm
methods, stats, settings, reshape2, lubridate, magrittr,
rlang, dplyr, tibble
xts, lubridate, dplyr, RHRV, magrittr, signal, waveslim,
futile.logger, kernlab, padr, varian, ggplot2
xts, lubridate, dplyr, RHRV, magrittr, signal, waveslim,
futile.logger, kernlab, padr, varian, ggplot2, R.utils
GGally, Matrix, abind, bayesplot, brms, broom.mixed, dismo,
dplyr, ggplot2, glmnet, gridExtra, igraph, jtools, rstanarm,
rstantools, utils
stringr, jsonlite, lubridate, magrittr, httr, purrr, dplyr,
methods, readr
stringr, jsonlite, lubridate, magrittr, httr, purrr, dplyr,
methods, readr, sf
XML, xml2, httr, RCurl, jsonlite, stringr
xml2, httr, rvest, RCurl, jsonlite, stringr, rcdk
xml2, httr, rvest, RCurl, jsonlite, stringr
xml2, httr, rvest, RCurl, jsonlite, stringr, methods
xml2, httr, rvest, RCurl, jsonlite, stringr, methods, dplyr,
purrr
xml2, httr, rvest, RCurl, jsonlite, stringr, methods, dplyr,
purrr, data.tree, tibble
xml2, httr, rvest, RCurl, jsonlite, stringr, methods, dplyr,
purrr, data.tree, tibble, base64enc, rlang
xml2, httr, rvest, jsonlite, stringr, methods, dplyr, purrr,
data.tree, tibble, base64enc, rlang
xml2, httr, rvest, jsonlite, stringr, methods, dplyr, purrr,
data.tree, tibble, base64enc, rlang, utils
callr (>= 2.0.0), base64enc, curl (>= 2.0), debugme, httr,
jsonlite, R6, showimage, utils
callr (>= 2.0.0), base64enc, curl (>= 2.0), debugme, httr,
jsonlite, R6, showimage, utils, withr
callr (>= 3.4.0), base64enc, curl (>= 2.0), debugme, httr,
jsonlite, R6, showimage, utils, withr
jsonlite, knitr, yaml, utils, rmarkdown (>= 2.2)
curl, jsonlite, magrittr (>= 1.5), R6 (>= 2.1.3), urltools (>=
1.6.0), fauxpas, crul (>= 0.7.0), base64enc
tools, grDevices, stats, dplyr, jsonlite, magick, geomorph,
httr, progress, rsvg, grid, ggplot2
moonBook, ggplot2, shiny, stringr, sjlabelled, flextable,
magrittr, rrtable, dplyr, tibble, purrr, rlang, tidyr,
tidyselect, psych, grid, ztable, ggforce, scales, vcd
chromote (>= 0.1.0), later, promises, magrittr, callr
jsonlite, stringr, crayon, RCurl, readr, rstudioapi,
pkgsearch, tibble, dplyr
permutations (>= 1.0-4), partitions, magrittr
readxl, dplyr, magrittr, tidytext, stringr, tibble, geonames,
countrycode, purrr, tidyr, forcats, ggplot2, rgeos, sf, here
data.table (>= 1.14.0), dplyr, furrr, future, glue, janitor,
jsonlite, magrittr, progressr (>= 0.6.0), Rcpp (>= 1.0.7),
RcppParallel (>= 5.1.4), rlang (>= 0.4.0), rvest (>= 1.0.0),
stringr (>= 1.3.0), tidyr (>= 1.0.0), usethis (>= 1.6.0)
dplyr, magrittr, plotly, Rcpp, sandwich, segmented, SPREDA,
survival
dplyr, LearnBayes, magrittr, plotly, Rcpp, sandwich,
segmented, SPREDA, survival
dplyr, ggplot2, lifecycle, magrittr, plotly, purrr, Rcpp,
sandwich, segmented, SPREDA, survival, tibble, tidyr
GeneralisedCovarianceMeasure, methods, mgcv, stats, xgboost
methods, utils, jsonlite (>= 0.9.17), magrittr
ggplot2, mclust, pROC (>= 1.9), reshape2, zoo
mathjaxr, disordR (>= 0.0-8), freealg (>= 1.0-4)
plotrix, progress, emstreeR, rgdal, raster, sp
MASS, stats, geepack, bindata, PoisNor,CRTgeeDR
data.table, magrittr, openxlsx, dplyr, purrr, tools,
rChoiceDialogs, rJava
data.table, magrittr, openxlsx, dplyr, purrr, tools, utils
data.table, magrittr, openxlsx, dplyr, purrr, tools, utils,
bit64
utils, graphics, grDevices, stats, cli, rstudioapi, jsonlite
readxl (>= 1.3.1), dplyr (>= 1.0.1), stringr (>= 1.4.0),
lubridate (>= 1.7.9), magrittr, tibble, zoo, purrr, tidyr (>=
1.1.1), broom (>= 0.7.0), cli, ggplot2 (>= 3.3.2), glue,
minpack.lm, patchwork (>= 1.0.1), rlang, usethis, nlstools,
pillar
dplyr, magrittr, tibble, tidyr, Rcpp (>= 0.12.16), vcfR,
viridis, ggplot2
colorspace, dplyr, eRm, foreign, ggraph, ggplot2, GPArotation,
grDevices, grid, httr, igraph, intergraph, lordif, lubridate,
nFactors, openxlsx, plyr, polycor, purrr, RColorBrewer, readr,
rlang, scales, srvyr, stringr, survey, TAM, tibble, tidygraph,
tidyr, WrightMap
colorspace, dplyr, eRm, ggraph, ggplot2, GPArotation,
grDevices, igraph, nFactors, plyr, polycor, purrr,
RColorBrewer, readr, rlang, scales, srvyr, stringr, TAM,
tibble, tidygraph, tidyr, WrightMap
htmltools, purrr, magrittr, utils, tools
dplyr, tidyr, reshape2, tidytext, purrr, Matrix, broom,
methods
dplyr, tidyr, reshape2, tidytext, purrr, Matrix, broom
rlang, dplyr, tidyr, reshape2, tidytext, purrr, Matrix, broom
rlang, dplyr, tidyr, reshape2, tidytext, purrr, Matrix, broom,
tibble, gapminder
broom, dplyr, Matrix, purrr, reshape2, rlang, tibble, tidyr,
tidytext
WikidataQueryServiceR (>= 1.0.0), WikidataR (>= 1.4.0), httr,
jsonlite, ratelimitr
rvest, stringi, WikipediR, xml2, sp, graphics, stringr,
selectr
rvest, stringi, WikipediR, xml2, sp, graphics, stringr,
selectr, units
rvest, stringi, WikipediR, xml2, sp, graphics, stringr,
selectr, units, dplyr, tidyr
dplyr, rvest, stringr, purrr, xml2, urltools
tibble, magrittr, rvest, purrr, xml2, urltools
tibble, magrittr, rvest, purrr, xml2, urltools, httr, curl
WikidataR, data.table, curl, crul (>= 0.3.4), tibble,
jsonlite, xml2
sp, rgeos, adehabitatLT, stats, graphics
adehabitatLT, dplyr, graphics, rgeos, sf, sp, stats
adehabitatLT, dplyr, graphics, sf, sp, stats
clubSandwich (>= 0.5.4), sandwich, robumeta, metafor, stats
DBI, dplyr, httr, jsonlite, lubridate, purrr, rnoaa, RSQLite,
shiny, tibble, tidyr, shinythemes, ggplot2, plotly, ggthemes
shiny, data.table, ggplot2, plotly, scales, shinydashboard, DT
(>= 0.3), colourpicker, RColorBrewer, shinyjs, viridis, rje,
grDevices, grid, plyr, circlize, ComplexHeatmap, stats, gplots,
reshape, rintrojs, RJSONIO, ggrepel (>= 0.6.12), DESeq2, rjson,
FactoMineR, factoextra, heatmaply (>= 0.14.1), shinycssloaders,
log4r, openssl, methods, R6
shiny, data.table, ggplot2, plotly (> 4.8.0), scales,
shinydashboard, DT (>= 0.3), colourpicker, RColorBrewer,
shinyjs, viridis, rje, grDevices, grid, plyr, circlize,
ComplexHeatmap, stats, gplots, reshape, rintrojs, RJSONIO,
ggrepel (>= 0.6.12), DESeq2, rjson, FactoMineR, factoextra,
heatmaply (>= 0.14.1), shinycssloaders, log4r, openssl,
methods, R6, magrittr, zip
shiny, data.table, ggplot2, plotly (> 4.8.0), scales,
shinydashboard, DT (>= 0.3), colourpicker, RColorBrewer,
shinyjs, viridis, rje, grDevices, grid, plyr, circlize,
ComplexHeatmap, stats, gplots, reshape, rintrojs, RJSONIO,
ggrepel (>= 0.6.12), DESeq2, rjson, FactoMineR, factoextra,
heatmaply (>= 0.14.1), shinycssloaders, log4r, openssl,
methods, R6, zip, shinyWidgets
rgdal, Rcpp, raster, sf, sp, rworldmap, gstat, ggplot2,
RColorBrewer, calibrate, grDevices, graphics, leaflet,
magrittr, foreach, parallel, doParallel, methods, spatstat,
stats, utils
Rcpp, raster, sf, elevatr, RColorBrewer, calibrate, grDevices,
graphics, foreach, parallel, doParallel, magrittr, methods,
stats, utils
Rgraphviz, RBGL, graph, bnlearn, HydeNet, rhandsontable,
shiny, shinydashboard, dplyr, visNetwork, shinyWidgets,
missRanger, tools, shinyalert, shinycssloaders, rintrojs,
arules, psych, DescTools, DT, linkcomm, igraph, parallel,
shinyBS
methods, glue, Rcpp (>= 1.0.1), RcppParallel (>= 4.4.0),
tidyselect
splus2R (>= 1.2-0), ifultools (>= 2.0-0), MASS, graphics,
methods
dplyr, stats, magrittr, tibble, glue, purrr
graphics, grDevices, mvtnorm (>= 1.0-0), Rcpp (>= 0.12.9),
stats, utils
rmarkdown, prereg, gert, ranger, yaml, digest
methods, rmarkdown, renv, prereg, gert, ranger, yaml, digest,
rticles, tinytex, credentials, usethis, gh
rmarkdown, prereg, gert, ranger, yaml, digest, rticles
methods, rmarkdown, prereg, gert, ranger, yaml, digest,
rticles
tidygraph, tibble, plyr, ggraph, purrr, stats, dplyr, ggplot2
digest, ggplot2, R6, patchwork, stringr, dplyr, SnowballC,
utils
digest, ggplot2, patchwork, stringr, dplyr, SnowballC
httr, tibble, dplyr, tidyr, magrittr, glue, purrr
Rcpp (>= 0.11.0), sparsesvd, iotools, methods, stats, utils,
graphics, grDevices, cluster, MASS
assertthat, dplyr, generics, purrr, rlang, rsample, stats,
tibble, tidyr, vip, workflows
assertthat, dplyr, generics, Metrics, purrr, rlang, rsample,
stats, tibble, tidyr, vip, workflows
assertthat, dplyr, generics, lifecycle, Metrics, purrr, rlang,
rsample, stats, tibble, tidyr, vip, workflows
callr, getPass, git2r (<= 0.21.0), glue, knitr, methods,
rprojroot, rstudioapi, R.utils, stringr (>= 1.1.0), tools,
utils, whisker, yaml
callr, getPass, git2r, glue, knitr (>= 1.18), methods,
rmarkdown (>= 1.7), rprojroot, rstudioapi, R.utils, stringr (>=
1.1.0), tools, utils, whisker, yaml
callr, fs (>= 1.2.4), getPass, git2r, glue, knitr (>= 1.18),
methods, rmarkdown (>= 1.7), rprojroot, rstudioapi, stringr (>=
1.1.0), tools, utils, whisker, yaml
callr, fs (>= 1.2.4), getPass, git2r, glue, knitr (>= 1.18),
methods, rmarkdown (>= 1.7), rprojroot, rstudioapi (>= 0.5),
stringr (>= 1.1.0), tools, utils, whisker, yaml
callr, fs (>= 1.2.4), getPass, git2r, glue, httr, knitr (>=
1.18), methods, rmarkdown (>= 1.7), rprojroot, rstudioapi (>=
0.5), stringr (>= 1.1.0), tools, utils, whisker, yaml
callr, fs (>= 1.2.7), getPass, git2r (>= 0.26.0), glue, httpuv
(>= 1.2.2), httr, knitr (>= 1.18), rmarkdown (>= 1.7),
rprojroot, rstudioapi (>= 0.6), stringr (>= 1.3.0), tools,
utils, whisker (>= 0.3-2), yaml
callr, fs (>= 1.2.7), getPass, git2r (>= 0.26.0), glue, httpuv
(>= 1.2.2), httr, knitr (>= 1.18), rmarkdown (>= 1.7),
rprojroot (>= 1.2), rstudioapi (>= 0.6), stringr (>= 1.3.0),
tools, utils, whisker (>= 0.3-2), xfun, yaml
cli (>= 2.0.0), ellipsis (>= 0.2.0), generics, glue, hardhat,
parsnip (>= 0.0.4), rlang (>= 0.4.1)
rlang, tune (>= 0.1.3), withr, dplyr (>= 1.0.0), purrr, tibble
(>= 3.1.0), vctrs, tidyr, workflows (>= 0.2.2), cli, ggplot2,
stats, prettyunits, rsample (>= 0.0.9)
rlang, tune (>= 0.1.3), withr, dplyr (>= 1.0.0), purrr, tibble
(>= 3.1.0), vctrs, tidyr, workflows (>= 0.2.2), cli, ggplot2,
stats, prettyunits, rsample (>= 0.0.9), generics
cli, dplyr (>= 1.0.0), generics, ggplot2, hardhat (>= 0.1.6),
lifecycle (>= 1.0.0), prettyunits, purrr, rlang, rsample (>=
0.0.9), stats, tibble (>= 3.1.0), tidyr, tune (>= 0.1.3),
vctrs, withr, workflows (>= 0.2.3)
cli, dplyr (>= 1.0.0), generics, ggplot2, hardhat (>= 0.1.6),
lifecycle (>= 1.0.0), prettyunits, purrr, rlang, rsample (>=
0.0.9), stats, tibble (>= 3.1.0), tidyr, tune (>= 0.1.3),
vctrs, withr, workflows (>= 0.2.4)
cli, dplyr (>= 1.0.0), generics (>= 0.1.2), ggplot2, glue,
hardhat (>= 1.2.0), lifecycle (>= 1.0.0), parsnip (>= 1.0.0),
pillar (>= 1.7.0), prettyunits, purrr, rlang, rsample (>=
0.0.9), stats, tibble (>= 3.1.0), tidyr, tune (>= 1.0.0),
vctrs, withr, workflows (>= 1.0.0)
dplyr, glue, janitor, jsonlite, lubridate, magrittr, progress,
purrr, qdapRegex, readr, rlang, rvest, stats, stringi, stringr,
tidyr, utils, withr, xml2
dplyr, glue, janitor, jsonlite, lubridate, magrittr, progress,
purrr, qdapRegex, readr, rlang, rvest (>= 1.0.0), stats,
stringi, stringr, tidyr (>= 1.2.0), utils, withr, xml2, tibble
dplyr, glue, httr, janitor, jsonlite, lubridate, magrittr,
progress, purrr, qdapRegex, readr, rlang, rvest (>= 1.0.0),
stats, stringi, stringr, tidyr (>= 1.2.0), utils, withr, xml2,
tibble, cli
dplyr, glue, httr, janitor, jsonlite, lubridate, magrittr,
progress, purrr, qdapRegex, readr, rlang, rstudioapi, rvest (>=
1.0.0), stats, stringi, stringr, tidyr (>= 1.2.0), tidyselect,
utils, withr, xml2, tibble, cli
dplyr, glue, httr, janitor, jsonlite, lubridate, magrittr,
progress, purrr, qdapRegex, readr, rlang, rstudioapi, rvest (>=
1.0.0), stats, stringi, stringr, tidyr (>= 1.2.0), tidyselect,
utils, withr, xml2, tibble, cli, curl
openair, plyr, dplyr, leaflet, RCurl, readr, zoo
openair, doParallel, parallel, foreach, plyr, dplyr, leaflet,
readr, zoo
openair, doParallel, parallel, foreach, dplyr, leaflet, readr,
zoo
openair, doParallel, parallel, foreach, dplyr, leaflet, tidyr,
readr, zoo
openair, doParallel, parallel, foreach, purrr, dplyr, leaflet,
tidyr, readr, zoo
openair, doParallel, parallel, foreach, purrr, dplyr, leaflet,
tidyr, readr
crul (>= 0.3.6), tibble (>= 1.2), jsonlite (>= 1.1),
data.table
crul (>= 0.6.0), tibble (>= 1.2), jsonlite (>= 1.1),
data.table
ggplot2, dplyr, tibble, magrittr, stringr, purrr, yaml, glue,
ggtext, ggfittext, cowplot
httr, xml2, jsonlite, pbapply, utils, tools
dplyr, stats, utils, tidyr, tidyselect (>= 1.0.0), magrittr,
purrr, reshape2, ggplot2, ggrepel, scales, htmltools, markdown,
rmarkdown, networkD3, DT, tidytext, ggraph, igraph, proxy,
ggwordcloud, methods, data.table
shiny, plyr, reshape2, googleVis, wpp2012, Hmisc, ggplot2
shiny (>= 0.10.0), plyr, reshape2, googleVis, wpp2012, Hmisc,
ggplot2
shiny (>= 0.10.0), plyr, reshape2, googleVis, wpp2015, Hmisc,
ggplot2, DT
shiny (>= 0.12.0), plyr, reshape2, googleVis, wpp2015, Hmisc,
ggplot2, DT
shiny (>= 0.12.0), shinyjs, plyr, reshape2, googleVis,
wpp2015, Hmisc, ggplot2, DT
shiny (>= 0.13.0), shinythemes, shinyjs, plyr, reshape2,
googleVis, wpp2015, Hmisc, ggplot2, DT
shiny (>= 0.13.0), shinythemes, shinyjs, plyr, reshape2,
googleVis, wpp2017, Hmisc, ggplot2, DT
shiny (>= 0.13.0), shinythemes, shinyjs, plyr, reshape2,
googleVis, wpp2019, Hmisc, ggplot2, DT
graphics, zoo, ggplot2 (>= 0.9), reshape2
graphics, grDevices, stats, ggplot2 (>= 0.9), reshape2
graphics, grDevices, stats, ggplot2 (>= 1.0), reshape2
graphics, grDevices, methods, stats, utils, ggplot2 (>= 1.0),
knitr, reshape2, zoo
graphics, grDevices, methods, stats, ggplot2 (>= 1.0), knitr
(>= 1.1), reshape2, zoo
graphics, grDevices, methods, stats, ggplot2 (>= 1.0),
reshape2, zoo
graphics, grDevices, RColorBrewer, stats, wrMisc
graphics, grDevices, grid, lattice, RColorBrewer, stats,
wrMisc
grDevices, graphics, limma, stats, wrMisc
grDevices, graphics, limma, rmarkdown, stats, wrMisc
grDevices, graphics, limma, knitr, stats, rmarkdown, wrMisc
grDevices, graphics, knitr, limma, stats, utils, wrMisc
grDevices, graphics, knitr, limma, stats, utils, wrMisc (>=
1.6.0)
grDevices, graphics, knitr, limma, stats, utils, wrMisc (>=
1.10.0)
graphics, grDevices, stats, utils, wrMisc, wrProteo
dplyr (>= 1.0.2), tidyr, magrittr, rlang
stats, boot, knitr, ggalluvial, coin, rlist, utils, testthat,
dplyr, forcats, purrr, ggdendro, glue, rlang, stringr,
magrittr, ggplot2, tibble, tidyr, kableExtra
stats, boot, knitr, coin, utils, dplyr, forcats, purrr, glue,
rlang, stringr, magrittr, ggplot2, tibble, tidyr, kableExtra
stats, boot, knitr, coin, utils, dplyr, forcats, purrr, glue,
rlang, stringr, magrittr, ggplot2, tibble, tidyr, kableExtra,
lifecycle
wrspathrowData, sp, raster, rgeos, rgdal
dplyr, future, furrr, purrr, Rcpp, piggyback, PL94171
dplyr, future, furrr, purrr, Rcpp, piggyback (>= 0.1.4),
PL94171
ggplot2, magrittr, stringr, scales, dplyr
methods, roxygen2, RCurl, jsonlite, lubridate, zoo
assertthat, dplyr, geosphere, ggplot2, reshape2, jsonlite,
lubridate, magrittr, purrr, RCurl, stats, tibble, zoo
rgdal, rgeos, class, stringr, Hmisc, gdata, corpcor
rgdal, rgeos, class, stringr, Hmisc, gdata, corpcor, rworldmap
rgdal, rgeos, class, stringr, Hmisc, gdata, corpcor,
rworldmap, methods
Rcpp, simts, utils, grDevices, coda, methods, graphics, stats
sde, stats, ftsa, rainbow, MASS, graphics
methods, data.table (>= 1.11.8), tidyr, lubridate (>= 1.7.4),
wyz.code.offensiveProgramming (>= 1.1.17), crayon, utils, stats
methods, data.table (>= 1.11.8), tidyr,
wyz.code.offensiveProgramming (>= 1.1.22), crayon, utils, stats
methods, data.table (>= 1.11.8), tidyr, lubridate (>= 1.7.4),
wyz.code.offensiveProgramming (>= 1.1.12), crayon, utils, stats
methods, data.table (>= 1.11.8), tidyr, stringr (>= 1.4.0), R6
(>= 2.4.0), crayon
methods, data.table (>= 1.11.8), tidyr, lubridate (>= 1.7.4)
methods, data.table (>= 1.11.8), tidyr,
wyz.code.offensiveProgramming (>= 1.1.17), stringr (>= 1.4.0),
R6 (>= 2.4.0), crayon (>= 1.3.4), digest (>= 0.6.23)
methods, data.table (>= 1.11.8), tidyr,
wyz.code.offensiveProgramming (>= 1.1.22), stringr (>= 1.4.0),
R6 (>= 2.4.0), crayon (>= 1.3.4), digest (>= 0.6.23)
methods, data.table (>= 1.11.8), tidyr, lubridate (>= 1.7.4),
wyz.code.offensiveProgramming (>= 1.1.7)
methods, data.table (>= 1.11.8), tidyr, lubridate (>= 1.7.4),
wyz.code.offensiveProgramming (>= 1.1.12), R6 (>= 2.4.0)
methods, data.table (>= 1.11.8), tidyr, lubridate (>= 1.7.4),
wyz.code.offensiveProgramming (>= 1.1.17), R6 (>= 2.4.0)
methods, data.table (>= 1.11.8), tidyr,
wyz.code.offensiveProgramming (>= 1.1.22), R6 (>= 2.4.0)
methods, data.table (>= 1.11.8), tidyr, lubridate (>= 1.7.4),
wyz.code.offensiveProgramming (>= 1.1.9), R6 (>= 2.4.0)
methods,Hmisc,RGtk2,x12 (>= 1.1-0), cairoDevice, grid,
lattice,stringr
BiocGenerics, cowplot (>= 1.1.1), curl (>= 4.3.2), data.table
(>= 1.14.2), DBI, GenomeInfoDb, GenomicRanges, ggplot2 (>=
3.3.6), ggrepel, ggridges, httr, IRanges, jsonlite (>= 1.7.2),
PupillometryR, RMySQL, scales, stringr (>= 1.4.0),
SummarizedExperiment (>= 1.4.0), utils (>= 4.0.3), viridis
raster, rgdal, sp, jpeg, tiff, shiny, shinyjs, shinyBS,
shinyAce, shinyTime, shinyFiles, shinydashboard, shinythemes,
colourpicker, rjson, stringr, data.table, lubridate, plotly,
moments, RCurl, methods, utils, graphics, stats
adimpro, colourpicker, data.table, graphics, jpeg, lubridate,
methods, moments, plotly, RCurl, raster, rgdal, rjson, shiny,
shinyjs, shinyBS, shinyAce, shinyTime, shinyFiles,
shinydashboard, shinythemes, sp, stats, stringr, tiff, utils
colourpicker, data.table, graphics, jpeg, lubridate, methods,
moments, plotly, RCurl, raster, rgdal, rjson, shiny, shinyjs,
shinyBS, shinyAce, shinyTime, shinyFiles, shinydashboard,
shinythemes, sp, stats, stringr, tiff, utils
colourpicker, data.table, graphics, jpeg, lubridate, methods,
moments, RCurl, raster, rgdal, rjson, sp, stats, stringr, tiff,
utils, shiny, shinyjs,
dplyr, forcats, ggplot2, magrittr, methods, rlang, stringr,
tidyr, viridis
htmltools, knitr, servr (>= 0.5), rmarkdown
htmltools, knitr (>= 1.21), servr (>= 0.13), xfun (>= 0.6),
rmarkdown
htmltools, knitr (>= 1.30), servr (>= 0.13), xfun (>= 0.6),
rmarkdown
htmltools, knitr (>= 1.30), servr (>= 0.13), xfun (>= 0.18),
rmarkdown
htmltools, knitr (>= 1.16), servr (>= 0.5), rmarkdown
htmltools, knitr (>= 1.16), servr (>= 0.5), xfun, rmarkdown
htmltools, knitr (>= 1.16), servr (>= 0.5), xfun (>= 0.2),
rmarkdown
htmltools, knitr (>= 1.21), servr (>= 0.13), xfun (>= 0.5),
rmarkdown
colorspace, glue, methods, purrr, utils, whisker
stats4, utils, methods, texreg (>= 1.30.2), Matrix, parallel,
boot, coda
stats4, utils, methods, statnet, statnet.common, network, sna,
texreg (>= 1.33), Matrix, parallel, boot, coda, stats, ROCR,
igraph, vegan, lme4 (>= 1.0)
stats4, utils, methods, statnet, statnet.common, network, sna,
ergm (>= 3.2.4), texreg (>= 1.34), Matrix, parallel, boot,
coda, stats, ROCR, igraph, vegan, lme4 (>= 1.0), Rcpp (>=
0.11.0), speedglm
bupaR, dplyr, XML, xml2, data.table, tidyr
bupaR, dplyr, XML, xml2, data.table, tidyr, purrr, stringr,
lubridate
Matrix (>= 1.1-0), methods, data.table (>= 1.9.6), magrittr
(>= 1.5),
Matrix (>= 1.1-0), methods, data.table (>= 1.9.6), magrittr
(>= 1.5), jsonlite (>= 1.0),
Matrix (>= 1.1-0), methods, data.table (>= 1.9.6), jsonlite
(>= 1.0),
assertthat, binom, dplyr, ggplot2, graphics, grDevices,
labeling, magrittr, pander, png, scales, stats, tibble, utils
assertthat, binom, Deriv, DescTools, dplyr, ggplot2, glue,
graphics, grDevices, gtable, Hmisc, labeling, magrittr,
minpack.lm, pander, png, RCurl, readr, scales, stats, stringr,
tibble, utils
gtools, numDeriv, optimParallel, splines, stringr, survexp.fr
httr, RJSONIO, methods, data.table, stats, R6
aod, glmmML, numDeriv, metafor, mvmeta, stats
plotrix, aod, glmmML, numDeriv, metafor, mvmeta, stats, MASS
xml2, stringr, tidyr, fs, stats, utils, lubridate, rlang
xml2, stringr, readr, tibble, httr, utils
xml2, stringr, readr, tibble, httr, utils, lubridate
dplyr, tidyr, ggplot2, purrr, rlang, tibble, qpdf
methods, utils, graphics, stats, grDevices
rstudioapi (>= 0.10), testthat (>= 2.3.1), plyr, dplyr,
tibble, rlang, utils, stats, checkmate (>= 2.0.0), lifecycle
clipr (>= 0.7.0), rstudioapi (>= 0.10), testthat (>= 2.3.1),
plyr, dplyr, tibble, rlang, utils, withr (>= 2.0.0), stats,
checkmate (>= 2.0.0), lifecycle
clipr (>= 0.7.0), checkmate (>= 2.0.0), dplyr, fansi (>=
0.4.1), lifecycle, plyr, rlang, rstudioapi (>= 0.10), stats,
testthat (>= 2.3.1), tibble, utils, withr (>= 2.0.0)
dplyr (>= 1.0.2), purrr (>= 0.3.4), stringr (>= 1.4.0),
magrittr, glue (>= 1.4.2), rlang (>= 0.4.10), cli, tidyselect,
readr, janitor, tm, haven (>= 2.5.0)
dplyr (>= 0.7.0), ggforce, grDevices, gridExtra, purrr (>=
0.2.0), readr, rlang (>= 0.1.2), stringr, tibble (>= 1.3.1),
tidyr (>= 0.6), utils, stats, vpc (>= 1.0.0)
dplyr (>= 0.7.0), ggforce, grDevices, purrr (>= 0.2.0), readr,
rlang (>= 0.1.2), stringr, tibble (>= 1.3.1), tidyr (>= 0.6),
utils, stats, vpc (>= 1.0.0)
Hmisc, survival, dplyr, methods, lazyeval, gam, splines, grid,
readr
Hmisc, survival, dplyr, tibble, methods, lazyeval, gam,
splines, grid, readr
dplyr, scales, foreach, ggplot2, grid, lubridate
dplyr (>= 0.7.0), scales, foreach, ggplot2, grid, lubridate
Matrix, glmnet, xgboost (>= 0.71.2), dplyr, fuzzyjoin, rlang,
methods
Matrix, glmnet (>= 3.0), xgboost (>= 0.71.2), dplyr,
fuzzyjoin, rlang, methods
Rcpp (>= 0.12.19), foreach, bigmemory, methods
stats, pdp, dplyr, ggplot2, mgcv, magrittr, purrr, tidyr
stats, pdp, dplyr, ggplot2, mgcv, magrittr, purrr, tidyr, pROC
(>= 1.15.3)
dplyr, httr, ncdf4, readr, sp, stats, utils
ggplot2, reshape2, lpSolveAPI, stats, utils
ggplot2, reshape2, lpSolveAPI, shiny, stats, utils
stats, utils, graphics, ggplot2, reshape2, lpSolveAPI, shiny
ggplot2, glpkAPI, graphics, lpSolveAPI, reshape2, stats, utils
dplyr, ggplot2, graphics, lpSolveAPI, magrittr, reshape2,
stats, utils
ggplot2, lpSolveAPI, reshape2, stats, utils
ggplot2, glpkAPI, lpSolveAPI, reshape2, stats, utils
ggplot2, glpkAPI, lpSolveAPI, reshape2, stats
parallel, mclust, MESS, data.table, biomaRt, Rcpp, Rsamtools,
IRanges
datasets, stats, randtoolbox, lhs, MLmetrics, graphics,
parallel
httr, jsonlite, lubridate, magrittr, purrr, R6, stringr
yaml, csv (>= 0.6.2), encode, units, spork, ggplot2, scales,
dplyr (>= 0.8.1), rlang, xtable, tidyr, vctrs, pillar
yaml, csv (>= 0.5.4), encode, ggplot2, knitr, dplyr (>=
0.8.1), rlang
yaml, csv (>= 0.5.4), encode, units, spork, ggplot2, dplyr (>=
0.8.1), rlang
yaml, csv (>= 0.5.4), encode, units, spork, ggplot2, dplyr (>=
0.8.1), rlang, xtable
yaml, csv (>= 0.5.4), encode, units, spork, ggplot2, dplyr (>=
0.8.1), rlang, xtable, tidyr
stats, randtoolbox, lhs, parallel, datasets
circular, cowplot, data.table, ggplot2, ggrepel, nloptr, plyr,
Rcpp, reshape2, splusTimeSeries, stats, tictoc, TMB, viridis,
zoo
dplyr, tibble, tidyr, utils, pROC, MLmetrics, rlang,
tidyselect
dplyr, utils, pROC, rlang, tidyselect, Rcpp, generics
dplyr, utils, pROC (>= 1.15.0), rlang (>= 0.4.0), tidyselect,
Rcpp, generics
dplyr (>= 0.8.5), generics, pROC (>= 1.15.0), rlang (>=
0.4.0), tidyselect, utils
dplyr, magrittr, Matrix, Rcpp (>= 0.12.18), rlang, stats
stringr, curl, tidyr, lubridate, furrr, purrr, future, tibble,
zoo, cli, readr, rvest, dplyr, quantmod (>= 0.4.20), magrittr,
humanize, methods
stringr, tidyr, lubridate, furrr, purrr, future, tibble, zoo,
cli, readr, rvest, dplyr, quantmod (>= 0.4.20), magrittr,
humanize, methods, pingr
httr, RCurl, rjson, plyr, jsonlite, stringr
crayon, fs, glue, magrittr, miniUI, purrr (>= 0.3.2), rlang,
rmarkdown, rstudioapi, shiny, shinyBS, stringr, usethis (>=
1.5.0), whoami, withr, yaml
crayon, fs, glue, magrittr, miniUI, purrr (>= 0.3.2), rlang
(>= 0.4.0), rmarkdown, rstudioapi, shiny, shinyBS, stringr,
usethis (>= 1.5.0), whoami, withr, yaml
crayon, fs, glue, magrittr, miniUI, purrr (>= 0.3.2), rlang
(>= 0.4.0), rmarkdown (>= 2.10), rstudioapi, shiny, shinyBS,
stringr, usethis (>= 1.5.0), whoami, withr, yaml
crayon, fs, glue, magrittr, purrr (>= 0.3.2), rlang (>=
0.4.10), rmarkdown (>= 2.10), rstudioapi, stringr, usethis (>=
1.5.0), whoami, withr, yaml
dplyr, ggplot2, reshape2, yaml, gridExtra, rpart.plot, stats,
utils
dplyr, ggplot2, reshape2, yaml, gridExtra, rpart.plot, stats,
lubridate, utils
magrittr, tibble, ggplot2, dbplyr, dplyr, tidyr, purrr, cli,
crayon, multiwayvcov, lmtest, broom, Matrix, msm, DBI, duckdb,
rappdirs, httr, scales, munsell, pander, gtable, colorspace,
rstudioapi
magrittr, tibble, ggplot2, dbplyr, dplyr, tidyr, purrr, cli,
crayon, sandwich, lmtest, broom, Matrix, msm, DBI, duckdb,
utils, rappdirs, httr, rstudioapi
magrittr, tibble, ggplot2, dbplyr, dplyr, tidyr, purrr, cli,
crayon, sandwich, lmtest, broom, Matrix, msm, DBI, duckdb,
utils, rappdirs, tools, httr, rstudioapi
stringr, writexl, reticulate, purrr, magrittr, tibble, dplyr
checkr, ggplot2, graphics, scales, stats, tools,
chk, yesno, ggplot2, graphics, scales, stats, tools, purrr,
lifecycle
chk, ggplot2, graphics, lifecycle, purrr, scales, stats,
tools, yesno
chk, ggplot2, graphics, lifecycle, purrr, stats, tibble,
tidyplus, tools, yesno
spelling, dplyr, readxl, stringr, eulerr, Peptides, utils,
svDialogs, tcltk
Rcpp (>= 0.12.1), boot (>= 1.3-2), glassoFast, wavethresh,
coda, calculus (>= 0.2.0)
DT (>= 0.2), shinyjs, shiny, shinydashboard, shinyBS, yuima,
quantmod, sde, ggplot2
DT (>= 0.2), shinyjs, shiny, shinydashboard, shinyBS, yuima,
quantmod, sde, ggplot2, plotly
DT (>= 0.2), shinyjs, shiny, shinydashboard, shinyBS, yuima,
quantmod, sde, ggplot2, plotly, ghyp
rootSolve, tidyr, ggplot2, data.table, tibble, dplyr
logging, dplyr, rootSolve, tidyr, ggplot2, data.table, tibble,
knitcitations, covr
dplyr, pscl (>= 1.5.5), MASS, doRNG, foreach, doParallel,
questionr, ggplot2, plotly, viridis, hrbrthemes, parallel
crul (>= 0.5.0), jsonlite (>= 1.5), tibble
Rcpp (>= 1.0.2), nleqslv, stats, evmix, graphics, Rdpack
doParallel, foreach, ggplot2, iterators, parallel, reshape2,
plyr, utils
ggplot2, foreach, iterators, reshape2, plyr, utils
ggplot2, data.table, reshape2, utils, Rcpp
dplyr, purrr, rstudioapi, tibble, Zelig, ZeligChoice, ZeligEI
Amelia, dplyr, MatchIt, purrr, rstudioapi, tibble, WhatIf,
Zelig, ZeligChoice, ZeligEI
R6, httr, jsonlite, xml2, keyring, tools, parallel
R6, httr, jsonlite, xml2, keyring, tools
R6, httr, jsonlite, XML, xml2, keyring, tools, atom4R
grid, graphics, MASS, tcltk, graph, stats, methods, PairViz
grid, graphics, stats, methods, MASS, graph, loon, PairViz
grid, graphics, stats, methods, MASS, graph, PairViz
grid, graphics, loon, stats, methods, MASS, graph, PairViz
magrittr, tidyverse, rlang, dplyr, tidyr, purrr, cli
stats, graphics, grDevices, utils, car, mgcv, vegan, Imap,
nnls, glm2
stats, graphics, grDevices, utils, car, mgcv, vegan, geodist,
nnls, glm2
rlang, stringr, raster, udunits2, tidycensus, tidyr, dplyr
rlang, stringr, raster, tidycensus, tidyr, dplyr
rlang, stringr, raster, tidycensus, tidyr, dplyr, jsonlite,
httr, curl, RSQLite, DBI
methods, utils, stats, graphics, grDevices, parallel
methods, gtools, compositions, Rcpp (>= 0.12.0), RcppParallel
(>= 5.0.1), rstan (>= 2.18.1), rstantools (>= 2.1.1)
httr, jsonlite, readr, mockery, webmockr
httr, jsonlite, readr, mockery, webmockr, base64url
httr, jsonlite, readr, mockery, webmockr, base64url, dplyr,
MMWRweek, utils, rlang, magrittr
ggplot2 (>= 2.0.0), methods, RColorBrewer, raster, reshape2,
rgdal
stats, utils, graphics, grDevices, lattice
stats, utils, graphics, grDevices, lattice (>= 0.18-1)
utils, graphics, grDevices, lattice (>= 0.20-27)
car, coda, foreign, geomorph, ggplot2, graphics, grDevices,
MASS, pgirmess, raster, readxl, rjags, sp, spdep, splancs,
stats, tcltk, tcltk2, tkrplot, utils, vegan, xlsx
car, coda, foreign, geomorph, ggplot2, graphics, grDevices,
MASS, pgirmess, raster, readxl, rjags, sp, spdep, splancs,
stats, tcltk, tcltk2, tkrplot, utils, vegan
graphics, utils, stats, plyr, scales, grDevices
filehash, jpeg, png, ipred, rpart, e1071, tree, utils
svMisc (>= 0.9-67), svDialogs (>= 0.9-53), filehash, jpeg,
png, tiff, utils, digest, tools, MASS, mda, shiny, DT
data.table, dplyr, lubridate, magick, openxlsx, paws, pbapply,
stringr, syuzhet, utils
RCurl, dismo, rfigshare, methods, testthat, roxygen2,
SDMTools, randomForest
dismo, methods, plyr, randomForest, RCurl, rfigshare, rgdal,
roxygen2, rworldmap, SDMTools, sp, testthat
dismo, methods, plyr, randomForest, RCurl, rfigshare, rgdal,
roxygen2, rworldmap, sp, testthat
RCurl, dismo, rfigshare, methods, testthat, roxygen2,
SDMTools, randomForest, rgdal, sp, plyr
stringr, magrittr, RColorBrewer, flextable, officer, moonBook,
scales
stringr, magrittr, RColorBrewer, flextable, officer,
rstudioapi, scales
DBI, DistributionUtils, Rcpp (>= 0.12.0), colorspace,
lubridate, mixtools, stats
DistributionUtils, Rcpp (>= 0.12.0), mixtools, stats
magrittr, rvest, stats, stringr, utils, dplyr, ggplot2,
lubridate, assertthat
Biobase (>= 1.11.42), Category (>= 2.0.2), methods
Biobase (>= 1.11.42), Category (>= 2.2.3), methods
Biobase, methods, geneplotter, graphics, graph, MASS, utils
MASS, KernSmooth, RColorBrewer, geneplotter, rrcov
methods, Biobase (>= 1.15.14), AnnotationDbi (>= 0.1.15), RBGL
Biobase (>= 1.15.29), Category (>= 2.3.26), methods,
AnnotationDbi (>= 0.0.89)
Biobase, methods, geneplotter, graphics, MASS, utils
Biobase, graphics, grDevices, methods, multtest, stats, tcltk,
utils
affxparser, affy (>= 1.16), stats, utils, preprocessCore
methods, utils, DBI, RSQLite, BiocGenerics, Biobase, IRanges
Biobase, Biostrings, DESeq, GenomicRanges, Hmisc, IRanges,
R2HTML, RColorBrewer, Rsamtools, ShortRead, XML, biomaRt,
edgeR, grDevices, graphics, methods, rJava, stats, svMisc,
utils
affy, Biobase, graphics, grDevices, limma, methods, stats,
utils, xtable
methods, BiocGenerics, IRanges, GenomicRanges, Biostrings
Biostrings, ipred, e1071, klaR, randomForest, class, tree,
nnet, rpart, party, foreign, Biobase, utils, stats, grDevices
graphics, methods, stats, utils, BiocGenerics, IRanges
methods, xcms, RBGL, graph, graphics, grDevices, stats, utils,
Hmisc, igraph
Biobase, CGHbase, CGHcall, methods, stats, utils
graph, methods, Biobase (>= 1.15.29), AnnotationDbi (>=
0.1.15), RBGL, GSEABase, genefilter, annotate (>= 1.15.6),
stats, utils
gplots, BiocGenerics, biomaRt, multtest, IRanges, Biostrings,
BSgenome, GO.db, limma, AnnotationDbi
Biostrings, fBasics, GenomicRanges, graphics, grDevices,
HilbertVis, IRanges, methods, ShortRead, stats, timsac, utils
IRanges, Biostrings, ShortRead, graphics, methods, stats,
utils
annotate, AnnotationDbi, Biobase, graphics, grDevices,
methods, stats, IRanges, rtracklayer
DNAcopy, grDevices, graphics, stats, utils
graph, KEGGgraph, lattice, mvtnorm, R.methodsS3, RBGL,
Rgraphviz, rrcov, NCIgraph
biomaRt, hwriter, methods, stringr, statmod (>= 1.4.15)
methods, plyr, qvalue, stats4, AnnotationDbi, DO.db,
org.Hs.eg.db, igraph, scales, ggplot2, graphics
RColorBrewer, amap, edgeR (>= 2.3.58), gplots, limma, DESeq,
grDevices, stats, utils, IRanges, zlibbioc
Biobase, cluster, graphics, grDevices, lattice, methods, stats
methods, graphics, BiocGenerics, IRanges (>= 1.13.9), DESeq
methods, isa2, eisa, GO.db, KEGG.db, AnnotationDbi
limma, genefilter, Biobase, BiocGenerics, Matrix,
AnnotationDbi
methods, utils, stats, BiocGenerics, snpStats, ff,
AnnotationDbi, Biobase, bit, VariantAnnotation
methods, Biobase, graph, Rgraphviz, GO.db, AnnotationDbi,
SparseM
graphics, grDevices, reshape2, stats, utils
BiocGenerics, annotate, AnnotationDbi, Biobase, graph,
methods, XML
methods, graphics, stats, utils, genefilter, Biobase,
GSEABase, les (>= 1.1.6)
methods, DBI, RSQLite, DNAcopy, survival, lmtest
Biobase (>= 2.5.5), affxparser, RColorBrewer, Biostrings
Biobase, MASS, graphics, stats, survival, limma
gmodels, graphics, gtools (>= 2.4.0), mvtnorm, stats
methods, DBI (>= 0.2-5), RSQLite (>= 0.8-1), BiocGenerics,
IRanges, GenomicRanges, Biostrings (>= 2.23.2), rtracklayer (>=
1.15.1), biomaRt, RCurl, utils, Biobase (>= 2.15.1)
IRanges (>= 1.13.19), rtracklayer (>= 1.15.5), lattice,
RColorBrewer, biomaRt (>= 2.11.0), GenomicRanges (>= 1.7.14),
AnnotationDbi (>= 1.17.11), Biobase (>= 2.15.3), BiocGenerics
(>= 0.1.4)
graph, igraph0, GSEABase, BioNet, cellHTS2, AnnotationDbi,
biomaRt
affy, Biobase, gplots, graphics, grDevices, limma, methods,
RColorBrewer, stats, stats4, utils
methods, Biobase, Biostrings, graphics, grDevices, ShortRead
methods, utils, stats, BiocGenerics, stats4
affxparser, DBI, GLAD, oligo, oligoClasses, stats
biomaRt, ENVISIONQuery, DAVIDQuery, AffyCompatible,
R.methodsS3, R.oo, utils
multtest, relimp, WriteXLS,gdata, RColorBrewer, geneplotter
Biobase, graphics, grDevices, methods, stats
e1071 (>= 1.5-12), pamr (>= 1.22), randomForest (>= 3.9-6),
RColorBrewer (>= 0.1-3), Biobase (>= 2.5.5), graphics,
grDevices, stats, utils
methods, BiocGenerics, Biostrings, BSgenome, graphics, gtools,
IRanges, stats, utils
graphics, plyr, IRanges, preprocessCore, vsn, grid, reshape
methods, DNAcopy, utils, msm, lattice, BiocGenerics,
VanillaICE (>= 1.17.22), ff, SNPchip (>= 2.0.3), Biobase,
foreach, oligoClasses (>= 1.17.38)
graphics, grid, methods, BiocGenerics, IRanges (>= 1.13.5),
lattice, rGADEM, stats, utils
igraph, HTSanalyzeR, PANR, RedeR, pvclust, MASS
graph, KEGGgraph, methods, RBGL, RCytoscape, R.methodsS3
multtest (>= 1.7.3), graphics, grDevices, stats
graphics, grDevices, limma, marray, methods, stats
graphics, marray, OLIN, tcltk, tkWidgets, widgetTools
Biobase, graphics, methods, stats, twilight
graphics, grDevices, MASS, methods, pvclust, stats, utils
methods, utils, Biobase, DBI, RSQLite, AnnotationDbi
AnnotationDbi, Biobase, Category, GO.db, graph, graphics,
GSEABase, KEGG.db, methods, ScISI, stats, stats4
methods, BiocGenerics, stats4, IRanges, GenomicRanges,
BSgenome, graphics, grDevices, stats
methods, graphics, grDevices, stats, GenomeGraphs, fda ,
IRanges, GenomicRanges, BSgenome, stats4, BiocGenerics
graphics, grDevices, Icens, stats, utils
BiocGenerics (>= 0.1.3), Biobase (>= 2.15.1), biomaRt,
Biostrings, BSgenome, IRanges (>= 1.13.10), methods, R2HTML,
Rsamtools, rtracklayer, ShortRead
graphics, grDevices, methods, stats, MASS, rgl
BiocGenerics, AnnotationDbi, Biostrings, ChIPpeakAnno,
graphics, IRanges (>= 1.13.5), multtest, stats, utils
RColorBrewer, ICS, ICSNP, cellHTS2, geneplotter, gplots, grid,
hwriter, lattice, latticeExtra, limma, methods, splots (>=
1.13.12)
geneplotter, limma, biomaRt, car, splots, methods
Rgraphviz, sfsmisc, graphics, methods, graph, grDevices
rJava, graphics, stats, utils, grDevices
methods, AnnotationDbi, reactome.db, stats4, plyr, igraph0,
qvalue, graphics, org.Hs.eg.db
BiocGenerics, IRanges (>= 1.13.5), GenomicRanges, BSgenome,
gplots, grid, MASS, gsmoothr, edgeR, DNAcopy, Ringo,
aroma.affymetrix
stats4, graph, graphics, grDevices, grid, methods, utils
BiocGenerics (>= 0.1.11), genefilter, limma, vsn, stats4
Biobase (>= 2.5.5), e1071, graphics, grDevices, kernlab,
methods, pamr, stats, utils
mclust, Biostrings, graphics, grDevices, IRanges, methods,
ShortRead, stats
methods, utils, IRanges, GenomicRanges, Biostrings, zlibbioc,
bitops, BiocGenerics (>= 0.1.3)
AnnotationDbi, Biobase, GO.db, ScISI, graphics, lattice,
methods, stats, BiocGenerics
graphics, lattice, grid, foreach, IRanges, utils, methods,
oligoClasses (>= 1.17.25), Biobase
graphics, grDevices, methods, RColorBrewer, stats, utils
AnnotationDbi, GO.db, RpsiXML, annotate, methods,
org.Sc.sgd.db, utils
BiocGenerics, IRanges, GenomicRanges, Biostrings, Biobase,
hwriter, Rsamtools, zlibbioc, lattice
mclust, hwriter, RColorBrewer, fields, methods
methods, Hmisc, minqa, stats, Biobase, plyr, IRanges
graphics, grDevices, methods, stats, tcltk, utils
stats, utils, methods, Biobase, oligoClasses (>= 1.17.36),
lattice, IRanges (>= 1.13.22), grid, msm, crlmm (>= 1.13.12),
foreach
methods, BiocGenerics (>= 0.1.0), IRanges (>= 1.13.5), Biobase
(>= 2.15.1), Rsamtools (>= 1.7.41), AnnotationDbi (>= 1.17.11),
Biostrings (>= 2.23.4), zlibbioc, BSgenome, GenomicFeatures,
snpStats, DBI
Biobase, BiocGenerics, genefilter, graphics, grDevices,
gtools, MergeMaid, methods, stats, utils, mvtnorm
Biobase, cluster, grDevices, graphics, methods, multtest,
stats, survival, splines, utils
AnnotationDbi, Biobase (>= 1.5.12), cluster (>= 1.9.1), GO.db
(>= 1.8.1), graphics, grDevices, KEGG.db (>= 1.8.1), methods,
multtest (>= 1.6.0), stats (>= 2.1.0)
affxparser (>= 1.16.0), affy, graphics, methods, Biobase
affy, affyPLM, Biobase, genefilter, graphics, grDevices,
lattice, RColorBrewer, simpleaffy, stats, utils, xtable
BiocGenerics, Biobase, affyio (>= 1.13.3), BiocInstaller,
graphics, grDevices, methods, preprocessCore, stats, utils,
zlibbioc
biomaRt, limma, GOstats, annotate, annaffy, genefilter, gcrma,
splines, xtable, AnnotationDbi, lattice
Biobase, AnnotationDbi, DBI, xtable, graphics, utils, stats,
methods, XML (>= 0.92-2)
affy, affyPLM (>= 1.27.3), beadarray, Biobase, Cairo (>=
1.4-6), genefilter, graphics, grDevices, grid, Hmisc, hwriter,
lattice, latticeExtra, limma, methods, RColorBrewer, setRNG,
simpleaffy, stats, SVGAnnotation (>= 0.9-0), utils, vsn (>=
3.23.3), XML
graphics, grDevices, grid, gridBase, hexbin, limma, marray,
methods, RColorBrewer, stats, utils
Biobase, AnnotationDbi, KEGG.db, limma, cluster, GOstats,
graphics, methods, stats
BeadDataPackR, limma, AnnotationDbi, stats4, BiocGenerics,
reshape2
Biobase (>= 2.5.5), limma, mvtnorm, methods, stats
Rgraphviz, geneplotter, graph, BiocGenerics, methods
Biobase, graph (>= 1.9.26), methods, RBGL (>= 1.13.5), tools,
utils, XML, RCurl
methods, scales, Hmisc, RColorBrewer, dichromat, BiocGenerics,
IRanges, GenomicRanges, Biostrings, Rsamtools, GenomicFeatures
Biobase (>= 1.15.29), AnnotationDbi (>= 0.1.15), hwriter,
GSEABase, Category (>= 2.21.2), GOstats, annotate, colorspace,
graph, RCytoscape (>= 1.5.11)
BSgenome, Biobase, oligo (>= 1.11.31), oligoClasses(>=
1.17.39), ff, preprocessCore, methods, stats, Biostrings,
IRanges, siggenes, nor1mix, gtools, grDevices, graphics, utils,
limma, parallel, sva(>= 3.1.2)
methods, BiocGenerics, IRanges, BSgenome, GenomicRanges,
lattice, ShortRead, stats
methods, stats4, ggplot2, DBI, plyr, AnnotationDbi, GO.db,
KEGG.db, org.Hs.eg.db, DOSE
DBI, affxparser, oligo, DNAcopy, preprocessCore, lattice
methods, graphics, BiocGenerics, IRanges, Rsamtools,
MASS, gplots, lattice, grDevices, graphics, stats
methods, Biobase (>= 2.15.4), BiocGenerics, affyio (>=
1.23.2), ellipse, genefilter (>= 1.37.1), mvtnorm,
preprocessCore (>= 1.17.7), splines, stats, SNPchip, utils,
lattice, ff, foreach
graphics, grDevices, minpack.lm (>= 1.0-4), stats, utils
affy, MASS, Biobase (>= 1.13.41), methods, graphics
tcltk, graphics, grDevices, stats, utils
Biobase, BiocGenerics, affy, lumi, methylumi, sfsmisc
gplots, graphics, MASS, methods, SparseM, stats, utils
Biobase, BiocGenerics (>= 0.1.14), feature, graph, graphics,
grDevices, MASS, methods, rrcov, stats, utils, stats4
Biobase, BiocGenerics (>= 0.1.6), flowCore, flowViz, graphics,
grDevices, methods, stats, stats4
flowCore, XML (>= 1.96), methods, Biobase
Biobase, graphics, grDevices, methods, rrcov, stats, feature,
flowCore
rrcov, flowClust,flowCore, graphics, methods, stats,
utils, BiocGenerics (>= 0.1.6)
caroline, flowClust, flowCore, flowMeans, TTR
methods, BiocGenerics, geneplotter, flowCore, flowViz, IRanges
BiocGenerics, MASS, flowViz, flowCore, fda (>= 2.2.6),
Biobase, methods, grDevices, graphics, stats, utils,
KernSmooth, lattice,compositions
flowCore, methods, flowViz, stats, flowClust
Biobase, graphics, grDevices, methods, flowCore, flowMeans,
sfsmisc, rrcov, flowClust, flowMerge, stats
Biobase, flowCore, graph, methods, RUnit, stats, utils, XML,
flowViz
stats4, Biobase, flowCore, graphics, grDevices, grid,
KernSmooth, lattice, latticeExtra, MASS, methods, RColorBrewer,
stats, utils
Biobase, XML, flowCore, graph, graphics, lattice, methods,
stats, stats4, utils
Biobase, DBI, methods, preprocessCore, stats, utils
Biobase, MASS, DBI, affy, methods, oligo, oligoClasses,
preprocessCore, utils, BiocGenerics
Biobase, affy (>= 1.23.2), affyio (>= 1.13.3), IRanges,
Biostrings (>= 2.11.32), splines
graphics, grDevices, methods, stats, tcltk, utils, xtable
utils, rtracklayer, GenomicFeatures (>= 1.3.15)
AnnotationDbi, annotate (>= 1.13.7), Biobase (>= 1.99.10),
graphics, methods, stats, survival
annotate, AnnotationDbi, Biobase (>= 2.5.5), graphics,
grDevices, grid, methods, RColorBrewer, stats, utils
methods, BiocGenerics, Biobase, DNAcopy, graphics, IRanges,
stats, GenomicRanges, Biostrings, BSgenome, bigmemory
methods, biovizBase(>= 1.4.2), reshape2, ggplot2(>= 0.9),
BiocGenerics, Biobase, IRanges, GenomicRanges, GenomicFeatures,
Rsamtools, BSgenome, gridExtra, scales, plyr,
VariantAnnotation, Hmisc, rtracklayer
methods, Biobase, Biostrings, BSgenome, graphics, grDevices,
stats, utils, IRanges
Biobase (>= 2.5.5), survival, AnnotationDbi, annotate,
multtest, graphics
mgcv, graphics, stats, utils, AnnotationDbi
methods, stats, tools, utils, BiocGenerics (>= 0.1.11)
AnnotationDbi, graph, graphics, methods, org.Hs.eg.db, stats,
utils
Biobase, RGtk2, cairoDevice, flowCore, flowStats, flowViz,
grDevices, graphics, methods, utils
tools, Biobase, hwriter, methods, vsn, stats, utils, e1071
graphics, grDevices, stats, survival, utils
AnnotationDbi,graph,DBI, graph, grDevices, methods, stats,
tools, utils
Biobase, graphics, grDevices, methods, stats, tools, utils
Matrix, penalized, graphics, grDevices, stats
affy (>= 1.23.4), methylumi, genoset, GenomicRanges, IRanges,
rtracklayer, annotate, Biobase (>= 2.5.5), mgcv (>= 1.4-0),
hdrcde, KernSmooth, preprocessCore, RSQLite, DBI,
AnnotationDbi, MASS, graphics, stats, stats4, methods
Biobase, graphics, grDevices, limma, Mfuzz, stats, utils
Biobase, affy, methods, stats, utils, zlibbioc
Biostrings, ca, graphics, grDevices, grid, gridBase, IRanges,
stats, utils
Biobase, graphics, lattice, annotate, genefilter,
AnnotationDbi, stats4, BiocGenerics
beanplot, RColorBrewer, nor1mix, siggenes, limma,
preprocessCore, crlmm, matrixStats, mclust
Biostrings, IRanges, seqLogo, parallel, methods, grid,graphics
boot, e1071, graph, graphics, grDevices, methods, RBGL (>=
1.8.1), RColorBrewer, Rgraphviz, stats, utils
graphics, grDevices, marray, methods, nnet, stats
methods, BiocGenerics, IRanges, Biobase, ShortRead,
GenomicRanges, stats
Biobase (>= 2.15.1), methods, graphics, BiocGenerics (>=
0.1.14), IRanges (>= 1.13.30), Biostrings (>= 2.23.6), affyio
(>= 1.23.2), ff, foreach, BiocInstaller, utils
affyio (>= 1.23.2), affxparser (>= 1.27.5), Biobase (>=
2.15.4), Biostrings (>= 2.23.6), BiocGenerics (>= 0.1.14), DBI
(>= 0.2-5), ff, graphics, methods, preprocessCore (>= 1.17.7),
splines, stats, stats4, utils, zlibbioc
survival, limma, Hmisc, gplots, Category, AnnotationDbi,
hopach, biomaRt, GSEABase, genefilter, xtable, annotate, mgcv,
SNPchip, hgu133a.db, HTSanalyzeR
Biobase, flowCore, graphics, grDevices, lattice, MASS,
methods, robustbase, stats, utils
Biobase, Category, graph, graphics, grDevices, lattice,
methods, RColorBrewer, stats
Biobase, BiocGenerics, graphics, grDevices, grid, MASS,
methods, RColorBrewer, rrcov, stats4, utils
methods, annotate, Matrix, graph, Biobase, GGBase,
AnnotationDbi
reshape, ggplot2, Biostrings, biovizBase, graphics, methods,
plyr, stats
Biostrings, IRanges, methods, graphics, seqLogo
stats, methods, BiocGenerics, IRanges, Biobase, affxparser,
stats4
GenomicRanges, IRanges, edgeR, DESeq, DBI, RMySQL (>= 0.6-0)
SparseM, GO.db, annotate, AnnotationDbi, survival, Biobase
graphics, methods, SparseM, stats, utils
baySeq, graphics, grDevices, IRanges, methods, utils,
GenomicRanges
graphics, marray, MASS, mvtnorm, quadprog, snowfall, stats
methods, utils, grDevices, graphics, stats, BiocGenerics,
Biobase, affy, genefilter, gcrma
aCGH, cluster, DNAcopy, GLAD, graphics, grDevices, limma,
methods, stats, tilingArray, utils
graphics, grDevices, methods, stats, survival, utils, Matrix
Biobase (>= 2.5.5), graphics, grDevices, gtools, methods,
RColorBrewer, stats, utils
annotate, Biobase, graphics, grDevices, grid, methods, utils,
XML
ipred, SuppDists, KernSmooth, survivalROC, bootstrap, grid,
rmeta
methods, BiocGenerics, Biobase, AnnotationDbi, gplots,
graphics, puma, stats, utils, annotate, DBI, RSQLite
strucchange, affy, vsn, genefilter, RColorBrewer, grid, stats4
Biobase, graphics, limma (>= 1.8.6), MASS, marray, methods,
stats
methods, graph, Biobase, SparseM, AnnotationDbi, lattice
affy, affyPLM, AnnotationDbi, Biobase, gcrma, GEOquery,
graphics, methods, reshape2, stats, utils
methods, affy (>= 1.23.4), limma, lattice
methods, utils, DBI, RSQLite, BiocGenerics, Biobase
BiocGenerics, graph, methods, Biobase, AnnotationDbi, RBGL,
GSEABase (>= 1.19.3), genefilter, annotate (>= 1.15.6), stats,
utils
Biobase, GEOquery, frma, affy, bigmemory, biganalytics
BiocGenerics, annotate, AnnotationDbi, Biobase (>= 2.17.8),
graphics, grDevices, methods, stats, IRanges, rtracklayer
genefilter, geneplotter, methods, MASS, RColorBrewer
methods, plyr, qvalue, stats4, AnnotationDbi, DO.db,
org.Hs.eg.db, igraph, scales, reshape2, graphics, GOSemSim
RColorBrewer, amap, edgeR (>= 2.3.58), gplots, DESeq,
grDevices, stats, utils, IRanges, zlibbioc
methods, graphics, stats, abind, utils, tiff, jpeg, png
AnnotationDbi, IRanges, Rsamtools (>= 1.6.1), rtracklayer(>=
1.14.1), methods, ChIPpeakAnno (>= 2.2.0), GenomicRanges,
VariantAnnotation, plyr, org.Hs.eg.db, snpStats, ggplot2 (>=
0.9.0), reshape (>= 0.8.4), scales
AnnotationDbi (>= 0.0.89), Biobase (>= 1.15.29), Category (>=
2.3.26), GO.db (>= 1.13.0), RBGL, annotate (>= 1.13.2), graph
(>= 1.15.15), methods, stats , AnnotationForge
methods, DBI, RSQLite, DNAcopy, survival, lmtest, quantsmooth
IRanges (>= 1.13.19), rtracklayer (>= 1.15.5), lattice,
RColorBrewer, biomaRt (>= 2.11.0), GenomicRanges (>= 1.7.14),
AnnotationDbi (>= 1.17.11), Biobase (>= 2.15.3), BiocGenerics
(>= 0.1.4), GenomicFeatures (>= 1.9.7), BSgenome (>= 1.25.1),
Biostrings (>= 2.25.1), biovizBase (>= 1.5.7)
graph, igraph0, GSEABase, BioNet, cellHTS2, AnnotationDbi,
biomaRt, RankProd
plyr, IRanges, preprocessCore, vsn, grid, reshape2, stats4,
affy
methods, DNAcopy, utils, msm, lattice, BiocGenerics,
VanillaICE (>= 1.19.23), ff, SNPchip (>= 2.3.10), Biobase (>=
2.17.8), foreach, oligoClasses (>= 1.19.34), GenomicRanges
graphics, grid, methods, BiocGenerics, IRanges (>= 1.13.5),
Biostrings (>= 1.24.0), lattice, rGADEM, stats, utils
graphics, limma, hgu133plus2.db, hgu133a.db, KEGG.db,
AnnotationDbi, Biobase, methods, nlme
methods, stats4, IRanges, GenomicRanges, graphics, grDevices,
stats
methods, PICS, graphics, grDevices, stats, Gviz, fda,
BSgenome, stats4, BiocGenerics, Rsamtools
BiocGenerics (>= 0.1.3), Biobase (>= 2.15.1), biomaRt,
Biostrings, BSgenome, IRanges (>= 1.13.10), methods, R2HTML,
Rsamtools, rtracklayer, ShortRead, VariantAnnotation
methods, AnnotationDbi, reactome.db, stats4, plyr, igraph,
qvalue, graphics
BiocGenerics, IRanges (>= 1.13.5), GenomicRanges, BSgenome,
gplots, grid, MASS, gsmoothr, edgeR (>= 2.99.2), DNAcopy,
Ringo, aroma.affymetrix
Biobase,hwriter,Category,GOstats,limma,lattice,AnnotationDbi,edgeR,
annotate,PFAM.db, GSEABase, BiocGenerics(>= 0.1.6)
graphics, lattice, grid, foreach, utils, methods, oligoClasses
(>= 1.19.30), Biobase, GenomicRanges
methods, utils, IRanges, GenomicRanges, BSgenome
methods, graph, RBGL, parallel, BiocGenerics
BiocGenerics, methods, Hmisc, minqa, stats, Biobase (>=
0.3.2), plyr, IRanges
stats, utils, methods, Biobase, oligoClasses (>=
1.19.36),lattice, IRanges (>= 1.13.22), grid, msm, crlmm,
foreach, GenomicRanges, matrixStats
methods, BiocGenerics (>= 0.1.0), IRanges, Biobase (>=
2.15.1), Rsamtools (>= 1.9.4), AnnotationDbi (>= 1.17.11),
Biostrings (>= 2.25.2), zlibbioc, BSgenome, GenomicFeatures (>=
1.9.35), DBI
IRanges, Rsamtools (>= 1.9.31), GenomicRanges, BiocGenerics,
Biostrings, parallel, gmapR (>= 0.99.28), GenomicFeatures,
VariantAnnotation, methods
BiocGenerics, zlibbioc, graphics, grDevices, methods
biomaRt, limma, GOstats, annotate, annaffy, genefilter, gcrma,
splines, xtable, AnnotationDbi, lattice, gplots
DBI, RMySQL (>= 0.6-0), digest, Biobase, grid, lattice,
Rsamtools, genefilter, IRanges, BiocGenerics
Biobase, AnnotationDbi, DBI, xtable, graphics, utils, stats,
methods, XML (>= 0.92-2), BiocGenerics (>= 0.1.13)
Biobase, graph (>= 1.9.26), methods, RBGL (>= 1.13.5), tools,
utils, XML, RCurl, RUnit
methods, stats, grDevices, scales, Hmisc, RColorBrewer,
dichromat, BiocGenerics, IRanges, GenomicRanges, Biostrings,
Rsamtools, GenomicFeatures
scales, stats, graphics, Biobase, locfit
BiocGenerics, Biobase, AnnotationDbi, hwriter, GSEABase,
Category, GOstats, annotate, colorspace, graph, RCytoscape (>=
1.5.11)
methods, stats4, DBI, plyr, AnnotationDbi, GO.db, KEGG.db,
org.Hs.eg.db, DOSE
methods, Biobase (>= 2.15.4), BiocGenerics, affyio (>=
1.23.2), ellipse, genefilter (>= 1.37.1), mvtnorm, splines,
stats, SNPchip, utils, lattice, ff, foreach, RcppEigen
bnlearn (>= 2.8), infotheo, gtools, pcalg, RColorBrewer,
plotrix, MASS
stats4, Biobase, flowCore, graphics, grDevices, grid,
KernSmooth, lattice, latticeExtra, MASS, methods, RColorBrewer,
stats, utils, hexbin,IDPmisc
Biobase, limma (>= 3.12.1), GSEAlm, Category, bigmemoryExtras
(>= 0.99.3), Matrix (>= 1.0.9), parallel, annotate, genefilter,
RColorBrewer, lattice, latticeExtra
Biobase, affy (>= 1.23.2), affyio (>= 1.13.3), IRanges,
Biostrings (>= 2.11.32), splines, BiocInstaller
methods, biovizBase(>= 1.5.9), reshape2, gtable, ggplot2(>=
0.9.2), BiocGenerics, Biobase, IRanges, GenomicRanges,
GenomicFeatures, Rsamtools, BSgenome, gridExtra, scales, plyr,
VariantAnnotation, Hmisc, rtracklayer
IRanges, Rsamtools (>= 1.7.4), rtracklayer (>= 1.17.15),
GenomicRanges, GenomicFeatures, Biostrings, VariantAnnotation,
tools, Biobase
methods, stats, stats4, tools, utils, BiocGenerics (>= 0.1.11)
methods, graphics, grDevices, stats, utils, KernSmooth
affy (>= 1.23.4), methylumi (>= 2.3.2), annotate, Biobase (>=
2.5.5), lattice, mgcv (>= 1.4-0), hdrcde, KernSmooth,
preprocessCore, RSQLite, DBI, AnnotationDbi, MASS, graphics,
stats, stats4, methods
lumi, methylumi, Gviz, genoset, GenomicRanges, IRanges,
rtracklayer, GenomicFeatures, annotate, Biobase (>= 2.5.5),
AnnotationDbi, genefilter, biomaRt, methods
BiocGenerics, beanplot, RColorBrewer, nor1mix, siggenes,
limma, preprocessCore, crlmm, matrixStats, mclust
boot, e1071, graph, graphics, grDevices, methods, RBGL (>=
1.8.1), RColorBrewer, stats, utils, Rgraphviz
BiocGenerics, Biobase (>= 2.17.8), methods, graphics, IRanges
(>= 1.13.30), GenomicRanges, Biostrings (>= 2.23.6), affyio (>=
1.23.2), ff, foreach, BiocInstaller, utils
affyio (>= 1.25.0), affxparser (>= 1.29.11), Biostrings (>=
2.25.12), BiocGenerics (>= 0.3.2), DBI (>= 0.2-5), ff,
graphics, methods, preprocessCore (>= 1.19.0), splines, stats,
stats4, utils, zlibbioc
methods, Biostrings, IRanges, ShortRead, GenomicRanges,
Biobase
XMLSchema (>= 0.6.0), SSOAP (>= 0.8.0), Biobase
corpcor (>= 1.6.2), graphics, igraph, marray, MASS, mvtnorm,
quadprog, penalized (>= 0.9-39), snowfall, stats
graphics, grDevices, methods, stats, survival, utils, Matrix,
BiocGenerics
hwriter, tcltk, tcltk2, RColorBrewer, lattice, qvalue,
multtest, utils, Biobase
methods, affy, preprocessCore, GenomicRanges, waveslim,
IRanges
multtest, qvalue, stats, utils, BiocInstaller
methods, stats, utils, rjson, BiocGenerics, BiocInstaller (>=
1.10.0), AnnotationDbi, GenomicRanges
Biobase, Biostrings, DESeq, GenomicRanges, Hmisc, IRanges,
R2HTML, RColorBrewer, Rsamtools, ShortRead, XML, biomaRt,
edgeR, grDevices, graphics, methods, rJava, stats, svMisc,
utils, sendmailR, bitops
methods, BiocGenerics, Biobase, IRanges, GenomicRanges,
rtracklayer, parallel, betareg, lokern, Formula
Rsamtools, GenomicRanges, IRanges, data.table, beanplot,
rtracklayer, som, VGAM
gplots, BiocGenerics, biomaRt, multtest, IRanges, Biostrings,
BSgenome, GO.db, limma, AnnotationDbi, GenomicFeatures
graphics, methods, stats, RCurl, DBI, digest, BiocGenerics
Biobase, ALL, graphics, stats, utils, cluster
GenomicRanges, IRanges, Biobase, locfit, genefilter, methods,
RColorBrewer, lattice
biomaRt, hwriter, methods, stringr, GenomicRanges, Rsamtools,
statmod (>= 1.4.15)
annotate, hgu133a.db, hgu133a2.db, hgu133plus2.db, RUnit,
BiocGenerics, xtable
methods, graphics, stats, abind, utils, tiff, jpeg, png,
locfit
methods, DBI, RSQLite, GWASExactHW, DNAcopy, survival, lmtest,
quantsmooth
methods, utils, stats, BiocGenerics, IRanges
IRanges (>= 1.13.19), rtracklayer (>= 1.15.5), lattice,
RColorBrewer, biomaRt (>= 2.11.0), GenomicRanges (>= 1.7.14),
AnnotationDbi (>= 1.17.11), Biobase (>= 2.15.3), BiocGenerics
(>= 0.1.4), GenomicFeatures (>= 1.9.7), BSgenome (>= 1.25.1),
Biostrings (>= 2.25.1), biovizBase (>= 1.5.7), Rsamtools(>=
1.11.1)
DESeq (>= 1.8.3), edgeR (>= 2.6.12), DESeq2, GenomicRanges,
IRanges
BiocGenerics (>= 0.2.0), IRanges (>= 1.14.3), GenomicRanges
(>= 1.7.12), Rsamtools (>= 1.8.5), Biostrings (>= 2.24.1),
chipseq (>= 1.6.1), rtracklayer (>= 1.17.19), GenomicFeatures
(>= 1.9.31), VariantTools (>= 1.1.16), VariantAnnotation (>=
1.5.41)
methods, Biobase, Biostrings, graphics, grDevices, rtracklayer
Biostrings, BSgenome, Rsamtools, graphics, gtools, IRanges,
methods, stats, utils, GenomicRanges, edgeR, GenomicFeatures,
DNAcopy, biomaRt, rtracklayer
plyr, IRanges, preprocessCore, vsn, grid, reshape2, stats4,
affy, impute
methods, DNAcopy, utils, msm, lattice, BiocGenerics,
VanillaICE (>= 1.21.24), ff, Biobase (>= 2.17.8), foreach,
oligoClasses (>= 1.21.12), GenomicRanges, matrixStats
methods, stats4, IRanges, GenomicRanges, graphics, grDevices,
stats, Rsamtools
methods, PICS, graphics, grDevices, stats, Gviz, fda,
BSgenome, stats4, BiocGenerics
methods, zlibbioc, BiocGenerics, IRanges, BiocInstaller,
Biobase, Biostrings, GenomicRanges, BSgenome, Rsamtools,
GenomicFeatures, ShortRead
BiocGenerics (>= 0.1.3), Biobase (>= 2.15.1), biomaRt,
Biostrings, BSgenome, IRanges (>= 1.17.24), methods, R2HTML,
Rsamtools, rtracklayer, ShortRead, VariantAnnotation, xtable,
tools
methods, AnnotationDbi, reactome.db, org.Hs.eg.db, stats4,
plyr, igraph, qvalue, graphics
BiocGenerics, IRanges (>= 1.13.5), GenomicRanges, BSgenome,
gplots, grid, MASS, gsmoothr, edgeR (>= 2.99.2), DNAcopy,
Ringo, aroma.affymetrix, Rsolnp, snowfall, parallel
Biobase,hwriter,Category,GOstats,limma,lattice,AnnotationDbi,edgeR,
annotate,PFAM.db, GSEABase, BiocGenerics(>= 0.1.6), grid, XML,
R.utils, ggplot2, ggbio
graphics, lattice, grid, foreach, utils, methods, oligoClasses
(>= 1.21.12), Biobase, GenomicRanges
foreach, lars, sn, DNAcopy, methods, rebmix, GenomicRanges,
IRanges
methods, utils, igraph, BiocGenerics, IRanges, GenomicRanges,
GenomicFeatures, graph, Rgraphviz
stats, utils, methods, Biobase, oligoClasses (>=
1.21.12),lattice, IRanges (>= 1.13.22), grid, msm, iterators,
foreach, GenomicRanges, matrixStats
methods, BiocGenerics, IRanges, Biostrings, Biobase,
Rsamtools, AnnotationDbi (>= 1.17.11), zlibbioc, BSgenome,
GenomicFeatures (>= 1.9.35), DBI, utils
IRanges, Rsamtools (>= 1.11.10), GenomicRanges, BiocGenerics,
Biostrings, parallel, gmapR (>= 1.1.16), GenomicFeatures,
VariantAnnotation, methods, RBGL, graph, Matrix, rtracklayer
biomaRt, limma, GOstats, annotate, annaffy, genefilter, gcrma,
splines, xtable, AnnotationDbi, lattice, gplots, R2HTML,
oligoClasses, ReportingTools, hwriter
Biobase, graph (>= 1.9.26), methods, RBGL (>= 1.13.5), tools,
utils, XML, RCurl, RUnit, knitr
methods, grDevices, stats, scales, Hmisc, RColorBrewer,
dichromat, BiocGenerics, IRanges, GenomicRanges, Biostrings,
Rsamtools, GenomicFeatures
VGAM, mgcv, GenomicFeatures, survival, sqldf
methods, Biobase, igraph, gRbase (>= 1.6.6), qpgraph,
KEGGgraph, corpcor, RBGL
BiocGenerics, DBI, affxparser, oligo, DNAcopy, preprocessCore,
lattice
methods, Biobase (>= 2.15.4), BiocGenerics, affyio (>=
1.23.2), illuminaio, ellipse, mvtnorm, splines, stats, SNPchip,
utils, lattice, ff, foreach, RcppEigen, matrixStats
bnlearn (>= 2.8), gtools, pcalg, RColorBrewer, plotrix, MASS
snow, tools, snowfall, RUnit, methods,ChemmineR,RCurl,digest,
BiocGenerics
methods, BiocGenerics, Biobase, IRanges, GenomicRanges,
beadarray
Biobase, XML,flowCore, graph, graphics, lattice, methods,
stats, stats4, utils
Biobase, annotate, AnnotationDbi, bigmemory, bigmemoryExtras,
BiocGenerics, brew, graphics, grDevices, GSEABase, hwriter,
IRanges, methods, parallel, Rook, stats, utils
Biobase, BiocGenerics, methods, GSEAlm, Category, bigmemory,
bigmemoryExtras (>= 1.1.2), Matrix (>= 1.0.9), parallel,
annotate, genefilter, AnnotationDbi
methods, biovizBase(>= 1.7.8), reshape2, gtable, ggplot2(>=
0.9.2), BiocGenerics, Biobase, IRanges, GenomicRanges,
GenomicFeatures, Rsamtools, BSgenome, gridExtra, scales, plyr,
VariantAnnotation, Hmisc, rtracklayer
Biobase, survival, AnnotationDbi, annotate, multtest, graphics
IRanges, Rsamtools (>= 1.7.4), rtracklayer (>= 1.17.15),
GenomicRanges, GenomicFeatures, Biostrings, VariantAnnotation,
tools, Biobase, BSgenome
affy (>= 1.23.4), methylumi (>= 2.3.2), annotate, Biobase (>=
2.5.5), lattice, mgcv (>= 1.4-0), hdrcde, nleqslv, KernSmooth,
preprocessCore, RSQLite, DBI, AnnotationDbi, MASS, graphics,
stats, stats4, methods
Biobase, graphics, grDevices, limma, Mfuzz, stats, utils, MASS
Biobase, graphics, lattice, annotate, genefilter,
AnnotationDbi, stats4, BiocGenerics, AnnotationForge, minfi
BiocGenerics, beanplot, RColorBrewer, nor1mix, siggenes,
limma, preprocessCore, illuminaio, matrixStats, mclust
mclust, MSBVAR, caret, e1071, sampling, class, kernlab,
lattice, nnet, randomForest, proxy, BiocGenerics, stats4,
RColorBrewer, scales, MASS, knitr
Rgraphviz, graph, png, AnnotationDbi, methods, utils
Biobase, gplots, igraph, relations, marray
BiocGenerics, CGHbase, graphics, grDevices, ic.infer, marray,
methods, quadprog, Rcsdp, stats, stats4, utils
parallel, methods, stats, GenomicRanges, IRanges
methods, Matrix (>= 1.0), graphics, annotate, graph (>=
1.37.6), Biobase, GGBase, AnnotationDbi, mvtnorm, qtl,
Rgraphviz
XML, XMLSchema (>= 0.6.0), SSOAP (>= 0.8.0), Biobase
hwriter, tcltk, tcltk2, RColorBrewer, lattice, qvalue,
multtest, utils, Biobase, knitr
affy, affyPLM, AnnotationDbi, Biobase, gcrma, GEOquery,
graphics, methods, reshape2, stats, utils, tseries, outliers
bit, ffbase, DNAcopy, snapCGH, tilingArray, aCGH, GLAD,
waveslim, cluster
methods, BiocGenerics, Biostrings, IRanges, GenomicFeatures,
Rsamtools, AnnotationDbi
methods, stats, utils, rjson, BiocGenerics, BiocInstaller (>=
1.11.0), AnnotationDbi, GenomicRanges
Biobase, BiocGenerics, Biostrings, DESeq, GenomicRanges,
Hmisc, IRanges, R2HTML, RColorBrewer, Rsamtools, ShortRead,
XML, biomaRt, edgeR, grDevices, graphics, methods, rJava,
stats, svMisc, utils, sendmailR, bitops
foreach, DNAcopy, methods, oligoClasses (>= 1.21.3)
methods, BiocGenerics, Biobase, IRanges, GenomicRanges,
rtracklayer, parallel, betareg, lokern, Formula, globaltest
methods, parallel, foreach, tools, BatchJobs, BBmisc
graphics, methods, stats, utils, BiocGenerics, IRanges,
XVector
sva, IlluminaHumanMethylation450kmanifest, limma, RPMM,
DNAcopy, preprocessCore, impute, marray, wateRmelon
IRanges, XVector, Biostrings, ShortRead, graphics, methods,
stats, utils
Biostrings, parallel, RSQLite, IRanges, stats, XVector
BiocGenerics (>= 0.7.5), methods, locfit, genefilter,
RColorBrewer, lattice
BiocGenerics (>= 0.7.5), biomaRt, hwriter, methods, stringr,
GenomicRanges, Rsamtools, statmod (>= 1.4.15)
methods, plyr, qvalue, stats4, AnnotationDbi, DO.db,
org.Hs.eg.db, igraph, scales, reshape2, graphics, GOSemSim,
grid
affy, frma, frmaTools, hgu133plus2.db, hgu133plus2frmavecs,
sva, rgl, ConsensusClusterPlus, cluster, siggenes, ROCR, pamr,
survival, gplots, AnnotationDbi, Biobase
RColorBrewer, amap, edgeR (>= 2.3.58), gplots, grDevices,
stats, utils, IRanges, zlibbioc
BiocGenerics (>= 0.7.1), methods, graphics, stats, abind,
tiff, jpeg, png, locfit
igraph (>= 0.6), RCurl, hwriter, R.utils, XML
methods, AnnotationDbi, GO.db, org.Hs.eg.db, Rcpp
org.Hs.eg.db, AnnotationDbi, topGO, cluster, flexmix, RBGL,
graph, Matrix, corpcor, Rcpp, utils
methods, DBI (>= 0.2-5), RSQLite (>= 0.8-1), BiocGenerics,
IRanges, GenomicRanges, Biostrings (>= 2.23.2), rtracklayer (>=
1.15.1), biomaRt (>= 2.17.1), RCurl, utils, Biobase (>= 2.15.1)
IRanges (>= 1.19.5), XVector, rtracklayer (>= 1.15.5),
lattice, RColorBrewer, biomaRt (>= 2.11.0), GenomicRanges (>=
1.7.14), AnnotationDbi (>= 1.17.11), Biobase (>= 2.15.3),
BiocGenerics (>= 0.1.4), GenomicFeatures (>= 1.9.7), BSgenome
(>= 1.25.1), Biostrings (>= 2.25.1), biovizBase (>= 1.5.7),
Rsamtools(>= 1.11.1), latticeExtra(>= 0.6-26)
DESeq (>= 1.8.3), edgeR (>= 2.6.12), DESeq2 (>= 1.2.8),
GenomicRanges, IRanges
graph, igraph, GSEABase, BioNet, cellHTS2, AnnotationDbi,
biomaRt, RankProd
BiocGenerics (>= 0.2.0), IRanges (>= 1.14.3), GenomicRanges
(>= 1.7.12), Rsamtools (>= 1.8.5), Biostrings (>= 2.24.1),
chipseq (>= 1.6.1), rtracklayer (>= 1.17.19), GenomicFeatures
(>= 1.9.31), VariantTools (>= 1.3.6), VariantAnnotation (>=
1.5.41)
methods, zlibbioc, BiocGenerics, IRanges, BiocInstaller,
Biobase, Biostrings, GenomicRanges, BSgenome, Rsamtools (>=
1.13.1), GenomicFeatures, ShortRead (>= 1.19.1)
BiocGenerics (>= 0.1.3), Biobase (>= 2.15.1), biomaRt,
Biostrings, BSgenome, IRanges (>= 1.19.5), XVector, methods,
R2HTML, Rsamtools, ShortRead, VariantAnnotation, xtable, tools
Rgraphviz, sfsmisc, graphics, methods, graph, grDevices,
flowType (>= 2.0.0)
methods, AnnotationDbi, reactome.db, org.Hs.eg.db, DOSE,
stats4, plyr, igraph, qvalue, graphics, graphite
IRanges (>= 1.20.0), GenomicRanges, BSgenome, gplots, grid,
MASS, gsmoothr, edgeR (>= 3.4.0), DNAcopy, Ringo,
aroma.affymetrix, Rsolnp, parallel, Biostrings, Rsamtools,
cluster
Biobase,hwriter,Category,GOstats,limma(>=
3.17.5),lattice,AnnotationDbi,edgeR, annotate,PFAM.db,
GSEABase, BiocGenerics(>= 0.1.6), grid, XML, R.utils, ggplot2,
ggbio, DESeq2, IRanges
utils, BiocGenerics (>= 0.1.3), zlibbioc, bitops
methods, Biostrings, GenomicRanges, IRanges, VariantAnnotation
Biostrings(>= 2.29.19), RSQLite(>= 0.11.4), seqLogo
methods, BiocGenerics, IRanges, XVector, Biostrings (>=
2.29.2), Biobase, Rsamtools, AnnotationDbi (>= 1.17.11),
zlibbioc, BSgenome, GenomicFeatures (>= 1.13.11), DBI, utils,
rtracklayer
IRanges, Rsamtools (>= 1.11.10), GenomicRanges, BiocGenerics,
Biostrings, parallel, gmapR (>= 1.3.8), GenomicFeatures,
VariantAnnotation, methods, Matrix, rtracklayer, BiocParallel
affyio (>= 1.13.3), BiocInstaller, graphics, grDevices,
methods, preprocessCore, stats, utils, zlibbioc
bigmemory, biganalytics, methods, BiocGenerics, Biobase
methods, grDevices, stats, scales, Hmisc, RColorBrewer,
dichromat, BiocGenerics, IRanges, GenomicRanges (>= 1.13.3),
Biostrings, Rsamtools (>= 1.13.1), GenomicFeatures
AnnotationDbi, hwriter, GSEABase, Category, GOstats, annotate,
colorspace, graph, RCytoscape (>= 1.5.11)
methods, GenomicRanges (>= 1.10.0), IRanges (>= 1.16.0),
BiocGenerics (>= 0.2.0)
chipenrich.data, methods, GenomicRanges (>= 1.10.0), IRanges
(>= 1.16.0), mgcv, plyr (>= 1.7.0), lattice, latticeExtra,
grid, stringr (>= 0.6), reshape
methods, Biobase, igraph, gRbase (>= 1.6.6), qpgraph,
KEGGgraph, corpcor, RBGL, Rcpp
methods, stats4, DBI, plyr, AnnotationDbi, GO.db, KEGG.db,
org.Hs.eg.db, DOSE, GOSemSim
yaml, seqinr, Biostrings, biomaRt, BSgenome, methods, gmp,
mclust, rtfbs, gplots, IRanges
methods, Biobase (>= 2.15.4), BiocGenerics, affyio (>=
1.23.2), illuminaio, ellipse, mvtnorm, splines, stats, SNPchip,
utils, lattice, ff, foreach, RcppEigen (>= 0.3.1.2.1),
matrixStats, VGAM
Rsamtools (>= 1.10.2), Biostrings (>= 2.26.3), IRanges,
GenomicRanges (>= 1.13.18), GenomicFeatures (>= 1.13.15),
biomaRt (>= 2.17.1), stringr, RCurl, plyr, VariantAnnotation
(>= 1.7.28), rtracklayer, RSQLite, AnnotationDbi
bnlearn (>= 2.8), gtools, pcalg, RColorBrewer, plotrix, MASS,
Rcpp
graphics, methods, parallel, utils, BiocGenerics (>= 0.8.0),
LSD (>= 2.5)
Biobase, BiocGenerics (>= 0.1.14), feature, graph, graphics,
grDevices, MASS, methods, rrcov, stats, utils, stats4, corpcor
flowCore, flowViz, graphics, methods, kza, minpack.lm, gplots
flowClust, flowCore, flowMeans, TTR, caroline(>= 0.6.6)
BiocGenerics, MASS, flowViz, flowCore, fda (>= 2.2.6),
Biobase, methods, grDevices, graphics, stats, utils,
KernSmooth, lattice
Biobase, BiocGenerics, graph, graphics, lattice, methods,
stats, stats4, utils, RBGL, XML, IDPmisc,
Cairo, tools,hexbin,gridExtra,Rgraphviz ,data.table ,plyr
,latticeExtra ,Rcpp
Biobase, annotate, AnnotationDbi, BiocGenerics, brew,
graphics, grDevices, GSEABase, hwriter, IRanges, methods,
parallel, Rook, stats, utils
Biobase, BiocGenerics, methods, GSEAlm, Category, Matrix (>=
1.0.9), parallel, annotate, genefilter, AnnotationDbi
Biobase, affy (>= 1.23.2), affyio (>= 1.13.3), XVector,
Biostrings (>= 2.11.32), splines, BiocInstaller
AnnotationDbi, graphics, grDevices, grid, RColorBrewer, stats,
utils
methods, biovizBase(>= 1.10.5), reshape2, gtable, ggplot2(>=
0.9.2), lattice, BiocGenerics, Biobase, IRanges, GenomicRanges
(>= 1.13.3), GenomicFeatures, Rsamtools (>= 1.13.1), BSgenome,
gridExtra, scales, plyr, VariantAnnotation, Hmisc, rtracklayer
IRanges, Rsamtools (>= 1.7.4), rtracklayer (>= 1.17.15),
GenomicRanges, GenomicFeatures, Biostrings, VariantAnnotation
(>= 1.7.34), tools, Biobase, BSgenome, methods
rhdf5, ggplot2, reshape, bit64, IRanges, GenomicRanges,
Biostrings
Biobase, cluster, graphics, grDevices, methods, stats, utils,
BiocGenerics
shiny, GenomicRanges, Gviz, RColorBrewer, ggplot2, reshape2,
rtracklayer, GO.db, plyr, gridSVG, XML
affy (>= 1.23.4), methylumi (>= 2.3.2), GenomicFeatures,
GenomicRanges, annotate, Biobase (>= 2.5.5), lattice, mgcv (>=
1.4-0), nleqslv, KernSmooth, preprocessCore, RSQLite, DBI,
AnnotationDbi, MASS, graphics, stats, stats4, methods
Biobase, graphics, lattice, annotate, genefilter,
AnnotationDbi, minfi, stats4, BiocGenerics
IRanges, beanplot, RColorBrewer, nor1mix, siggenes, limma,
preprocessCore, illuminaio, matrixStats, mclust, genefilter,
nlme
affyio (>= 1.25.0), affxparser (>= 1.29.11), BiocGenerics (>=
0.3.2), DBI (>= 0.2-5), ff, graphics, methods, preprocessCore
(>= 1.19.0), splines, stats, stats4, utils, zlibbioc
mclust, MSBVAR, caret, e1071, sampling, class, kernlab,
lattice, nnet, randomForest, proxy, FNN, BiocGenerics, stats4,
RColorBrewer, scales, MASS, knitr
Rgraphviz, graph, png, AnnotationDbi, KEGGREST, methods, utils
survival, limma, Hmisc, gplots, Category, AnnotationDbi,
hopach, biomaRt, GSEABase, genefilter, xtable, annotate, mgcv,
SNPchip, hgu133a.db, HTSanalyzeR, ellipse
Streamer, DBI, RSQLite, methods, IRanges, reshape2, batch
parallel, methods, stats, GenomicRanges (>= 1.13.3), IRanges
Biobase, methods, knitr, tools, Nozzle.R1, xtable, pander
methods, parallel, Matrix (>= 1.0), annotate, graph (>=
1.40.1), Biobase, GGBase, AnnotationDbi, mvtnorm, qtl,
Rgraphviz
methods, IRanges, XVector, Biostrings, ShortRead,
GenomicRanges, Biobase
GenomicRanges , IRanges, edgeR, DESeq, DBI
bit, ffbase, DNAcopy, tilingArray, GLAD, waveslim, cluster,
aCGH, snapCGH
methods, BiocGenerics, IRanges, Biostrings, Rsamtools,
GenomicFeatures, AnnotationDbi
methods, stats, utils, rjson, BiocGenerics, httr,
BiocInstaller (>= 1.11.0), AnnotationDbi, GenomicRanges,
interactiveDisplay (>= 1.0.23)
methods, BiocGenerics, IRanges, GenomicRanges, XVector,
Biostrings, Rsamtools
biocViews (>= 1.31.9), BiocInstaller, graph, devtools (>=
1.4.1), httr, knitr, tools, optparse, codetools, methods
methods, parallel, foreach, tools, BatchJobs, BBmisc,
BiocGenerics
graphics, methods, stats, utils, BiocGenerics, IRanges,
XVector, zlibbioc
affy, ggplot2, annotate, grid, gridExtra, tcltk, Biobase
Rcpp, data.table, RColorBrewer, scales, grid, plyr, knitr,
abind, clue, grDevices, utils
sva, IlluminaHumanMethylation450kmanifest, limma, RPMM,
DNAcopy, preprocessCore, impute, marray, wateRmelon, plyr
BiocGenerics (>= 0.8.0), Rsamtools (>= 1.14.2), GenomicRanges
(>= 1.14.4), chipseq (>= 1.12.0), GenomicAlignments (>=
0.99.2), gtools, BiocParallel, methods, IRanges, reshape2,
Nozzle.R1, Biobase,grDevices, stats, utils
BiocGenerics (>= 0.1.0), GO.db, BSgenome, GenomicFeatures,
AnnotationDbi, limma, multtest
AnnotationDbi, BiocGenerics, IRanges, GenomicFeatures,
GenomicRanges, ggplot2, gplots, grDevices, gtools, Matrix,
plyr, RColorBrewer, rtracklayer,
TxDb.Hsapiens.UCSC.hg19.knownGene
Biobase (>= 2.17.8), graphics, grDevices, methods, stats,
IRanges, rtracklayer
rtracklayer, Rgraphviz, ggplot2, GenomicFeatures,
TxDb.Mmusculus.UCSC.mm9.knownGene
BiocGenerics (>= 0.7.5), methods, locfit, genefilter,
geneplotter, RColorBrewer, lattice
BiocGenerics, biomaRt, hwriter, methods, stringr, Rsamtools,
statmod, geneplotter, genefilter, RColorBrewer
methods, plyr, qvalue, stats4, AnnotationDbi, DO.db, igraph,
scales, reshape2, graphics, GOSemSim, grid
RColorBrewer, amap, edgeR (>= 2.3.58), gplots, grDevices,
stats, utils, IRanges, zlibbioc, lattice
graphics, stats, utils, parallel, methods, ROCR, DESeq,
baySeq, snow, edgeR
limma, genefilter, Biobase, BiocGenerics, Matrix,
AnnotationDbi, digest
methods, utils, stats, BiocGenerics, snpStats, ff, Rsamtools,
AnnotationDbi, Biobase, bit, VariantAnnotation, hexbin,
rtracklayer, Gviz, stats4, IRanges, GenomicRanges, iterators,
Biostrings, ROCR, biglm
BiocGenerics, IRanges, ShortRead, rtracklayer, ggplot2
methods, stats, BiocGenerics, IRanges, GenomicRanges,
Biostrings, Rsamtools, BiocParallel
methods, DBI (>= 0.2-5), RSQLite (>= 0.8-1), Biostrings (>=
2.23.2), rtracklayer (>= 1.15.1), biomaRt (>= 2.17.1), RCurl,
utils, Biobase (>= 2.15.1), GenomeInfoDb
methods, utils, stats, BiocGenerics, IRanges, XVector
IRanges (>= 1.19.5), XVector, rtracklayer (>= 1.15.5),
lattice, RColorBrewer, biomaRt (>= 2.11.0), GenomicRanges (>=
1.7.14), AnnotationDbi (>= 1.17.11), Biobase (>= 2.15.3),
GenomicFeatures (>= 1.9.7), BSgenome (>= 1.31.5), Biostrings
(>= 2.31.8), biovizBase (>= 1.5.7), Rsamtools(>= 1.11.1),
latticeExtra(>= 0.6-26), matrixStats(>= 0.8.14),
GenomicAlignments (>= 0.99.11)
BiocGenerics (>= 0.2.0), IRanges (>= 1.14.3), GenomicRanges
(>= 1.7.12), Rsamtools (>= 1.8.5), Biostrings (>= 2.24.1),
chipseq (>= 1.6.1), hwriter (>= 1.3.0), Cairo (>= 1.5.5),
GenomicFeatures (>= 1.9.31), BiocParallel, parallel, tools,
rtracklayer (>= 1.17.19), GenomicAlignments, VariantTools (>=
1.3.6)
Biostrings, graphics, grDevices, rtracklayer, RColorBrewer,
Matrix
BiocGenerics, stats4, graphics, stats, utils, MASS, Biobase,
quantreg, limma, affy, SparseM, vsn
methods, Formula, data.table, pracma, MCMCpack, coda, modeest,
ggplot2, reshape, plyr, Biobase, MASS, testthat, Rcpp
plyr, IRanges, preprocessCore, vsn, grid, reshape2, stats4,
affy, impute, pcaMethods, mzID (>= 1.1.5)
RSQLite (>= 0.8-1), Biobase, AnnotationDbi, IRanges,
Biostrings, Rsamtools, GenomicRanges, VariantAnnotation
RSQLite (>= 0.8-1), Biobase, AnnotationDbi, IRanges,
Biostrings, GenomicRanges, VariantAnnotation
methods, AnnotationDbi (>= 1.16.10), DBI, RSQLite, IRanges,
Biobase
methods, DNAcopy, utils, msm, lattice, BiocGenerics,
VanillaICE (>= 1.26.1), ff, Biobase (>= 2.23.6), foreach,
oligoClasses (>= 1.24.0), IRanges, GenomicRanges, matrixStats
graphics, grDevices, gridExtra, Matrix, parallel,
RColorBrewer, reshape, scales, utils
graphics, grid, methods, IRanges (>= 1.13.5), Biostrings (>=
1.24.0), lattice, rGADEM, stats, utils
methods, stats4, IRanges, GenomicRanges, graphics, grDevices,
stats, Rsamtools, GenomicAlignments
methods, zlibbioc, BiocGenerics, IRanges, BiocInstaller,
Biobase, Biostrings, GenomicRanges, BSgenome, Rsamtools (>=
1.13.1), GenomicFeatures, ShortRead (>= 1.19.1),
GenomicAlignments
BiocGenerics (>= 0.1.3), biomaRt, BSgenome, IRanges, XVector,
methods, R2HTML, Rsamtools, ShortRead, VariantAnnotation,
xtable, tools, TeachingDemos
RedeR, minet, snow, limma, data.table, ff, car, IRanges
IRanges, ggbio, ggplot2, VariantAnnotation, h5vc, exomeCopy,
SomaticSignatures, Rsamtools, shiny, GenomicRanges
RCurl, rjson, rcdk, foreach, doParallel, Biostrings, GOSemSim,
ChemmineR, fmcsR
AnnotationDbi, reactome.db, org.Hs.eg.db, DOSE, igraph,
graphite
IRanges (>= 1.20.0), GenomicRanges, GenomicAlignments,
BSgenome, gplots, grid, MASS, gsmoothr, edgeR (>= 3.4.0),
DNAcopy, Ringo, aroma.affymetrix, Rsolnp, parallel, Biostrings,
Rsamtools, cluster
Biobase,hwriter,Category,GOstats,limma(>=
3.17.5),lattice,AnnotationDbi,edgeR, annotate,PFAM.db,
GSEABase, BiocGenerics(>= 0.1.6), grid, XML, R.utils, DESeq2(>=
1.3.41), IRanges, ggplot2, ggbio
R.utils, Biobase, rpx, biocViews, interactiveDisplay,
BiocInstaller
methods, parallel, Biostrings, GenomicRanges, IRanges,
VariantAnnotation
Biobase, GenomicRanges (>= 1.15.26), IRanges (>= 1.21.22),
hwriter, methods, zlibbioc, lattice, latticeExtra,
GenomeInfoDb, GenomicRanges, IRanges, VariantAnnotation,
Biostrings, ggplot2, ggbio, stringr, reshape2, NMF, methods,
pcaMethods, gtools
methods, utils, igraph, BiocGenerics, IRanges, GenomicRanges,
GenomicFeatures, GenomicAlignments, graph, Rgraphviz
IRanges (>= 1.21.43), XVector, Biostrings (>= 2.31.19),
Biobase, AnnotationDbi (>= 1.17.11), zlibbioc, BSgenome,
GenomicFeatures (>= 1.15.15), DBI, utils, rtracklayer
DBI, RSQLite (>= 0.8-1), Biobase, IRanges (>= 1.21.13),
AnnotationDbi, BiocParallel, Biostrings (>= 2.29.19),
GenomicRanges, Rsamtools, BSgenome,
BSgenome.Hsapiens.UCSC.hg19, VariantAnnotation, shiny
Rsamtools (>= 1.11.10), BiocGenerics, Biostrings, parallel,
gmapR (>= 1.5.15), GenomicFeatures, Matrix, rtracklayer,
BiocParallel, GenomeInfoDb
affy, affyPLM (>= 1.27.3), beadarray, Biobase, Cairo (>=
1.4-6), genefilter, graphics, grDevices, grid, gridSVG, Hmisc,
hwriter, lattice, latticeExtra, limma, methods, RColorBrewer,
setRNG, stats, SVGAnnotation (>= 0.9-0), utils, vsn (>=
3.23.3), XML
BeadDataPackR, limma, AnnotationDbi, stats4, reshape2,
GenomicRanges, IRanges, illuminaio
gplots, BiocGenerics, Biobase, methods, grid, hwriter,
ReportingTools, graphics
methods, grDevices, stats, scales, Hmisc, RColorBrewer,
dichromat, BiocGenerics, IRanges, GenomicRanges (>= 1.13.3),
Biostrings, Rsamtools (>= 1.13.1), GenomicAlignments,
GenomicFeatures, AnnotationDbi, VariantAnnotation
matrixStats, limma, doRNG, BiocGenerics, utils
BiocGenerics, EBarrays, gaga, gtools, GenomicFeatures, mgcv,
Rsamtools, rtracklayer, sqldf, survival, VGAM
methods, Biobase, Rcpp, igraph, gRbase (>= 1.6.6), qpgraph,
KEGGgraph, corpcor, RBGL
methods, stats4, plyr, AnnotationDbi, GO.db, KEGG.db, DOSE,
GOSemSim
tcltk, knitr (>= 1.2), markdown, ROCR, lattice (>= 0.16),
gplots, gtools, gdata, caTools, grid, KernSmooth, MASS,
ggplot2, stringr, modeest, edgeR, limma, vioplot, methods
IRanges, GenomicRanges, Rsamtools (>= 1.10.2),
GenomicAlignments, Biostrings (>= 2.26.3), GenomicFeatures (>=
1.13.15), biomaRt (>= 2.17.1), stringr, RCurl, plyr,
VariantAnnotation (>= 1.7.28), rtracklayer, RSQLite,
AnnotationDbi
Biobase (>= 2.24.0), BiocGenerics (>= 0.10.0), biomaRt (>=
2.20.0), Biostrings (>= 2.32.1), DESeq (>= 1.16.0), edgeR (>=
3.6.6), genomeIntervals (>= 1.20.1), GenomicAlignments (>=
1.0.2), GenomicRanges (>= 1.16.3), graphics, IRanges (>=
1.22.9), LSD (>= 2.5), methods, parallel, Rsamtools (>=
1.16.1), ShortRead (>= 1.22.0), utils
Biobase, BiocGenerics (>= 0.1.14), graph, graphics, methods,
rrcov, stats, utils, stats4, corpcor
rrcov,flowCore, graphics, methods, stats, utils
BiocGenerics, MASS, flowViz, flowCore, fda (>= 2.2.6),
Biobase, methods, grDevices, graphics, stats, utils,
KernSmooth, lattice,ks
Biobase, graph, methods, stats, utils, flowViz, corpcor,
RUnit, XML
Biobase, annotate, AnnotationDbi, BiocGenerics, brew,
graphics, grDevices, GSEABase, hwriter, IRanges, methods,
parallel, stats, utils
grid, grDevices, graphics, stats, utils, biovizBase(>=
1.12.1), reshape2, gtable, Biobase, IRanges (>= 1.21.19),
GenomicRanges (>= 1.13.3), GenomicFeatures, Rsamtools (>=
1.13.1), GenomicAlignments, BSgenome, gridExtra, scales,
VariantAnnotation, Hmisc, rtracklayer, Biostrings
IRanges, Rsamtools (>= 1.7.4), rtracklayer (>= 1.17.15),
GenomicFeatures, Biostrings, VariantAnnotation (>= 1.9.4),
tools, Biobase, BSgenome, GenomicAlignments
methods, Biostrings, IRanges, GenomicRanges, BiocGenerics,
snpStats, Rsamtools, rtracklayer
rhdf5, reshape, IRanges, Biostrings, Rsamtools, methods,
GenomicRanges, abind, BiocParallel, BatchJobs, h5vcData
methods, grid, graph, hypergraph, Rgraphviz, stats4
shiny, RColorBrewer, ggplot2, reshape2, plyr, gridSVG, XML,
Category, AnnotationDbi
edgeR, NOISeq, baySeq, NBPSeq, biomaRt, utils, gplots,
corrplot, vsn, brew, rjson, log4r
Biobase, graphics, lattice, annotate, genefilter,
AnnotationDbi, minfi, stats4, BiocGenerics, illuminaio
IRanges, beanplot, RColorBrewer, nor1mix, siggenes, limma,
preprocessCore, illuminaio, matrixStats, mclust, genefilter,
nlme, reshape
Biobase, RJSONIO, stringr, reshape2, ggplot2, KEGGREST, plyr,
XML, RCurl, flexmix, Matrix, methods, tools
XML, plyr, parallel, doParallel, foreach, iterators
Biobase, methods, BiocGenerics, graphics, stats
BiocGenerics (>= 0.3.2), Biobase (>= 2.17.8), methods,
graphics, IRanges (>= 1.13.30), GenomicRanges, Biostrings (>=
2.23.6), affyio (>= 1.23.2), ff, foreach, BiocInstaller, utils
mclust (>= 4.3), MSBVAR, caret, e1071, sampling, class,
kernlab, lattice, nnet, randomForest, proxy, FNN, BiocGenerics,
stats4, RColorBrewer, scales, MASS, knitr
Biobase, flowCore, graphics, grDevices, lattice, MASS,
methods, robustbase, stats, utils, flowStats
Streamer, DBI, RSQLite, IRanges, reshape2, plyr, batch,
RColorBrewer
methods, parallel, Matrix (>= 1.0), annotate, graph (>=
1.41.2), Biobase, GGBase, AnnotationDbi, mvtnorm, qtl,
Rgraphviz
GenomicRanges, GenomicAlignments(>= 0.99.4), methods,
rtracklayer, IRanges
XML (>= 1.98-0), BiocGenerics (>= 0.7.7), IRanges (>=
1.19.34), XVector (>= 0.1.3), GenomicRanges (>= 1.15.26),
Biostrings (>= 2.29.18), BSgenome (>= 1.23.1), zlibbioc, RCurl
(>= 1.4-2), Rsamtools (>= 1.13.1), GenomicAlignments, tools
methods, reshape2, scales, gridExtra, XML
sqldf, hash, ggplot2, graphics,grDevices, RColorBrewer
graphics, grDevices, stats, utils, BiocGenerics
hwriter, tcltk, tcltk2, RColorBrewer, lattice, qvalue,
multtest, utils, Biobase, knitr, Biostrings, cleaver,
BiocParallel
methods, AnnotationDbi, gplots, graphics, puma, stats, utils,
annotate, DBI, RSQLite
GenomicAlignments, GenomicFeatures, Gviz, pbapply, Rsamtools,
rtracklayer, scales
Category, methods, AnnotationDbi, annotate (>= 1.17.4)
flowCore, graphics, lattice, latticeExtra, geneplotter, MASS, grid
methods, Biobase (>= 1.15.14), AnnotationDbi (>= 0.1.15), RBGL, GSEABase
Biobase (>= 2.1.0), graphics, methods, stats, utils, affyio, preprocessCore
tools, Biobase, graph (>= 1.9.26), RBGL (>= 1.13.5), XML
XML (>= 1.98-0), rJava, IRanges, Biostrings
graph, methods, Biobase (>= 1.15.29), AnnotationDbi (>= 0.1.15), RBGL,
GSEABase, genefilter, annotate (>= 1.15.6), stats, utils
Biobase, MASS, graphics, stats, survival
AnnotationDbi, Biobase, Category, GO.db, GSEABase, KEGG.db, ScISI, graph, graphics, methods, stats
graph, graphics, grDevices, grid, methods, utils
Biobase, RBGL, XML (>= 1.9), graph, hypergraph, methods, utils
Biobase, e1071, graphics, grDevices, kernlab, methods, pamr,
stats, utils
AnnotationDbi, Biobase, GO.db, ScISI, graphics, lattice, methods, stats
AnnotationDbi, GO.db, RpsiXML, annotate, methods, org.Sc.sgd.db, utils
IRanges, Biostrings, Biobase, BSgenome, hwriter
Biobase, cluster, graphics, grDevices, methods, multtest,
splines, stats, survival, utils
biomaRt, limma, GOstats, annotate, annaffy,
genefilter, gcrma, splines, xtable, AnnotationDbi
Biobase, AnnotationDbi, xtable, graphics, utils, stats, methods
Biobase, RColorBrewer, affy, beadarray, genefilter,
grDevices, graphics, hwriter, lattice, latticeExtra,
limma, marray, methods, simpleaffy, stats, stats4,
utils, vsn
affyio, preprocessCore, utils, stats, genefilter, splines, Biobase, mvtnorm
Biobase, feature, graph, graphics, grDevices, MASS, methods,
rrcov, stats, utils
MASS, flowCore, fda, Biobase, methods, grDevices, graphics, stats, utils, flowViz
Biobase, flowCore, graphics, grDevices, grid, KernSmooth,
lattice, latticeExtra, MASS, methods, RColorBrewer, stats,
utils
AnnotationDbi, annotate (>= 1.13.7), Biobase (>= 1.99.10), graphics,
methods, stats, survival
annotate, AnnotationDbi, Biobase, graphics, grDevices, grid,
methods, RColorBrewer, stats, utils
AnnotationDbi,graph,DBI, graph, grDevices, methods, RSQLite,
stats, tools, utils
graphics, IRanges, Biostrings, methods, Biobase
splines, affxparser, graphics, utils, stats, DBI, Biobase (>= 1.13.58), methods, affyio
Biobase (>= 1.13.58), Biostrings, IRanges
Biobase, Category, graph, graphics, grDevices, lattice, methods, RColorBrewer, stats
Biobase, graphics, grDevices, grid, MASS, methods,
RColorBrewer, rrcov, utils
Biobase, KernSmooth, grDevices, graphics, hexbin, lattice,
methods, prada, stats, survival, utils
affy, Biobase, gcrma, genefilter, graphics, grDevices,
methods, stats, utils
Biobase, graphics, grDevices, gtools, methods, RColorBrewer, stats, utils
annotate, Biobase, graphics, grDevices, grid, methods, utils, XML
strucchange, affy, vsn, genefilter, RColorBrewer, grid
methods, graph (>= 1.14.0), Biobase (>= 1.99.0),
SparseM (>= 0.73), AnnotationDbi (>= 1.1.35), lattice
affy, Biobase, graphics, grDevices, limma, methods, stats, utils, xtable
Biostrings, ipred, e1071, klaR, randomForest, class, tree, nnet,
rpart, party, foreign, Biobase, utils, stats, grDevices
graphics, methods, stats, utils, IRanges, Biobase
biomaRt, multtest, IRanges, Biostrings, BSgenome, GO.db, limma
Biostrings, BSgenome, fBasics, graphics, grDevices, HilbertVis, IRanges, methods, ShortRead, stats, timsac, utils
IRanges, Biostrings, ShortRead, graphics, methods, stats, utils
annotate, AnnotationDbi, Biobase, graphics, grDevices, methods, stats, IRanges, rtracklayer
AnnotationDbi, IRanges (>= 1.1.6), annaffy
annotate, AnnotationDbi, Biobase, graph, methods, XML
methods, DBI, RSQLite, IRanges (>= 1.3.14), Biostrings (>= 2.13.54), BSgenome
affy, Biobase, gplots, graphics, grDevices, limma, methods, RColorBrewer, stats, utils
Biobase (>= 2.5.5), e1071, graphics, grDevices, kernlab, methods, pamr,
stats, utils
Biostrings, graphics, grDevices, IRanges, methods, ShortRead, stats
Biobase (>= 2.5.5), graphics, grDevices, methods, oligoClasses (>= 1.7.8), stats, utils
Biobase, cluster, grDevices, graphics, methods, multtest, stats,
survival, splines, utils
affyio (>= 1.13.3), Biobase (>= 2.5.5), graphics, grDevices, methods,
preprocessCore, stats, utils
BSgenome, IRanges, lattice, methods, ShortRead, stats
affyio, preprocessCore, utils, stats, genefilter, splines, mvtnorm, oligoClasses, ellipse, methods, SNPchip
Biobase, flowCore, flowViz, graphics, grDevices, methods, stats
Biobase, flowCore, XML (>= 1.96), methods, stats, utils
rrcov, flowClust,flowCore, graphics, methods, stats, utils
MASS, flowCore, fda (>= 2.1.3), Biobase, methods, grDevices, graphics,
stats, utils, flowViz, KernSmooth, lattice
annotate, AnnotationDbi, Biobase (>= 2.5.5), graphics, grDevices, grid,
methods, RColorBrewer, stats, utils
Biobase (>= 2.5.5), survival, AnnotationDbi, annotate, multtest, graphics
boot, e1071, graph, graphics, grDevices, methods, RBGL (>= 1.8.1), RColorBrewer, Rgraphviz, stats, utils
graphics, methods, IRanges (>= 1.3.16), Biostrings (>= 2.13.9), Biobase (>= 2.5.5)
splines, affxparser (>= 1.17.3), graphics, utils, stats, DBI (>= 0.2-4), Biobase (>= 2.5.5), methods, affyio (>= 1.13.3)
flowCore, graphics, lattice, Biobase, methods, MASS
Biobase (>= 2.5.5), affxparser, methods, IRanges
graphics, grDevices, methods, stats, survival, utils
Biobase (>= 2.5.5), graphics, grDevices, gtools, methods, RColorBrewer, stats, utils
methods, xcms, RBGL, graph, graphics, grDevices, stats, utils
biomaRt, multtest, IRanges, Biostrings, BSgenome, GO.db,limma
Biostrings, fBasics, GenomicRanges, graphics, grDevices, HilbertVis, IRanges, methods, ShortRead, stats, timsac, utils
AnnotationDbi, IRanges (>= 1.1.6), annaffy, GSEABase, rtracklayer
boot, graphics, stats, utils, genefilter
Biobase, graphics, grDevices, methods, stats, samr
gdata (>= 2.3.0), gplots (>= 2.3.1), gtools (>= 2.2.3),
graphics, grDevices, methods, stats, utils, xtable
methods, DBI (>= 0.2-5), RSQLite (>= 0.8-1), IRanges, GenomicRanges,
Biostrings (>= 2.16.5), rtracklayer (>= 1.7.11), biomaRt, RCurl, utils
e1071 (>= 1.5-12), pamr (>= 1.22), randomForest (>= 3.9-6),
RColorBrewer (>= 0.1-3), Biobase (>= 2.5.5), graphics, grDevices, stats, utils
graphics, grid, IRanges, lattice, methods, rGADEM, stats, utils
AnnotationDbi, Biobase, Category, GO.db, graph, graphics, GSEABase, KEGG.db, methods, ScISI, stats
IRanges, GenomicRanges, BSgenome, methods, graphics, grDevices, stats
methods, utils, IRanges, GenomicRanges, Biostrings
Biobase (>= 2.7.4), graphics, grDevices, methods, oligoClasses (>= 1.9.52), stats, utils
IRanges, GenomicRanges, Biostrings, Biobase, hwriter, Rsamtools
AnnotationDbi, Biobase (>= 1.5.12), cluster (>= 1.9.1),
GO.db (>= 1.8.1), graphics, grDevices, KEGG.db (>= 1.8.1),
methods, multtest (>= 1.6.0), stats (>= 2.1.0)
affxparser (>= 1.16.0), gcrma, affy, graphics, methods
Biobase, graph (>= 1.9.26), methods, RBGL (>= 1.13.5), tools, utils, XML
BSgenome, Biobase, oligo (>= 1.11.31),
oligoClasses(>= 1.9.42), ff, preprocessCore, methods, stats,
Biostrings, IRanges, siggenes, nor1mix, gtools, grDevices,
graphics, utils
BSgenome, GenomicRanges, IRanges, lattice, methods, ShortRead, stats
affyio (>= 1.15.2),
ellipse,
ff,
genefilter,
mvtnorm,
preprocessCore,
splines,
stats,
SNPchip,
utils
gplots, graphics, MASS, methods, SparseM, stats, utils, xcms
Biobase, graphics, grDevices, methods, rrcov, stats, feature, flowCore
MASS, flowViz, flowCore, fda (>= 2.1.3), Biobase, methods, grDevices,
graphics, stats, utils, KernSmooth, lattice
Biobase, flowCore, graph, methods, RUnit, stats, utils, XML, flowViz
Biobase, methods, affy, preprocessCore, stats, utils
Biobase, MASS, affy, methods, preprocessCore, utils
utils, rtracklayer, Biostrings, GenomicFeatures (>= 0.5.5)
methods, Biobase, Biostrings, BSgenome, graphics, grDevices, stats, utils
Biobase, RGtk2, cairoDevice, flowCore, flowStats (>= 1.3.20),
flowViz, grDevices, graphics, methods, utils
AnnotationDbi,graph,DBI, graph, grDevices, methods,
stats, tools, utils
Biobase, affyio, methods, stats, utils, oligo
Biostrings, ca, graphics, grDevices, grid, gridBase, IRanges, stats, utils
graphics, Biostrings (>= 2.15.11), affyio (>= 1.15.2)
affyio (>= 1.15.2),
affxparser (>= 1.17.3),
Biobase (>= 2.7.3),
DBI (>= 0.2-4),
graphics,
methods,
preprocessCore (>= 1.9.0),
splines,
stats,
utils
baySeq, graphics, grDevices, IRanges, methods, utils
aCGH, cluster, DNAcopy, GLAD, graphics, grDevices, limma,
methods, multtest, stats, tilingArray, utils
Biobase, methods, AnnotationDbi, gplots, graphics, puma, stats, utils
Biobase, graphics, grDevices, methods, multtest, stats,
tcltk, utils
affxparser, affy (>= 1.16), stats, utils
methods, xcms, RBGL, graph, graphics, grDevices, stats, utils, Hmisc
graph, KEGGgraph, lattice, mvtnorm, R.methodsS3, RBGL, Rgraphviz, rrcov
Biobase, digest, marray (>= 1.5.10), methods, SSOAP (>= 0.1.2), utils
methods, DBI (>= 0.2-5), RSQLite (>= 0.8-1), IRanges, GenomicRanges,
Biostrings (>= 2.17.6), rtracklayer (>= 1.7.11), biomaRt, RCurl, utils
graph, igraph, GSEABase, BioNet, cellHTS2, AnnotationDbi, biomaRt
Biostrings, BSgenome, graphics, gtools, IRanges, methods,
stats, utils
Biobase, biomaRt, Biostrings, BSgenome, IRanges, methods, R2HTML, Rsamtools, rtracklayer, ShortRead
Biobase, genefilter, graphics, grDevices, gtools, MergeMaid,
methods, stats, utils
Biobase, AnnotationDbi, DBI, xtable, graphics, utils, stats, methods
Biobase, RColorBrewer, affy, beadarray, genefilter,
grDevices, graphics, hwriter, lattice, latticeExtra,
limma, marray, methods, RJSONIO, simpleaffy, stats, stats4,
SVGAnnotation (>= 0.7.2), utils, XML
Biobase, AnnotationDbi, KEGG.db, GSEAlm, limma, cluster, GOstats,
graphics, methods, stats
affy, MASS,  Biobase (>= 1.13.41), methods,  graphics
Biobase, MASS, affy, affyPLM, methods, preprocessCore, utils
boot, gplots, GSRI (>= 1.1.7), RColorBrewer
affy (>= 1.23.4), methylumi, annotate, Biobase (>= 2.5.5), mgcv (>= 1.4-0), hdrcde, KernSmooth, preprocessCore, RSQLite, DBI, AnnotationDbi, MASS, graphics, stats, methods
methods, Rdbi (>= 1.0.2), RdbiPgSQL (>= 1.0.2)
methods, annotate, Matrix, graph, Biobase, AnnotationDbi
Biobase, IRanges, edgeR, DESeq, DBI,  RMySQL (>= 0.6-0)
Biobase, methods, AnnotationDbi, gplots, graphics, puma, stats, utils, annotate, DBI, RSQLite
Biobase, graphics, limma (>= 1.8.6), MASS, marray, methods, stats
Biobase, Biostrings, DESeq, GenomicRanges, Hmisc, IRanges, R2HTML, RColorBrewer, Rsamtools, ShortRead, XML, biomaRt, edgeR, grDevices, graphics, methods, rJava, stats, svMisc, utils
graphics, methods, stats, utils, IRanges
methods, xcms, RBGL, graph, graphics, grDevices, stats, utils, Hmisc, igraph
methods, AnnotationDbi, GO.db, org.Hs.eg.db, org.Ag.eg.db, org.At.tair.db, org.Bt.eg.db, org.Ce.eg.db, org.Cf.eg.db, org.Dm.eg.db, org.Dr.eg.db, org.EcK12.eg.db, org.EcSakai.eg.db, org.Gg.eg.db, org.Mm.eg.db, org.Mmu.eg.db, org.Pf.plasmo.db, org.Pt.eg.db, org.Rn.eg.db, org.Sc.sgd.db, org.Sco.eg.db, org.Ss.eg.db, org.Xl.eg.db
methods, graphics, stats, utils, genefilter, Biobase, GSEABase, les (>= 1.1.6)
Biobase, biomaRt, Biostrings, BSgenome, IRanges (>= 1.10.2), methods, R2HTML, Rsamtools, rtracklayer, ShortRead
RColorBrewer, ICS, ICSNP, cellHTS2, geneplotter, gplots,
grid, hwriter, lattice, latticeExtra,
limma, methods, qvalue, splots (>= 1.13.12)
affy, affyPLM (>= 1.27.3), beadarray, Biobase, Cairo (>= 1.4-6), genefilter,
graphics, grDevices, grid, Hmisc, hwriter, lattice, latticeExtra,
limma, methods, RColorBrewer, setRNG, simpleaffy, stats,
SVGAnnotation (>= 0.9-0), utils, vsn, XML
Biobase, AnnotationDbi, KEGG.db, limma, cluster,
GOstats, graphics, methods, stats
methods, qvalue, AnnotationDbi, GO.db, KEGG.db, org.Hs.eg.db, org.Mm.eg.db, org.Sc.sgd.db
affyio (>= 1.19.2),
ellipse,
ff (>= 2.2-1),
genefilter (>= 1.33.0),
mvtnorm,
preprocessCore (>= 1.13.4),
splines,
stats,
SNPchip,
utils
MASS, flowViz, flowCore, fda (>= 2.2.6), Biobase, methods, grDevices,
graphics, stats, utils, KernSmooth, lattice
Biobase, MASS, DBI, affy, methods, oligo, oligoClasses, preprocessCore, utils
Biobase, DNAcopy, graphics, IRanges, methods, stats
methods, Biobase, Biostrings, BSgenome, graphics, grDevices, stats, utils, IRanges
Biobase, RGtk2, cairoDevice, flowCore, flowStats,
flowViz, grDevices, graphics, methods, utils
affy (>= 1.23.4), methylumi, annotate, Biobase (>= 2.5.5), mgcv (>= 1.4-0), hdrcde,  KernSmooth, preprocessCore, RSQLite, DBI, AnnotationDbi, MASS, graphics, stats, methods
Biobase, graphics, lattice, annotate, genefilter, AnnotationDbi
graphics, Biostrings (>= 2.19.0), affyio (>= 1.19.2)
affyio (>= 1.19.4),
affxparser (>= 1.23.1),
Biobase (>= 2.11.8),
Biostrings,
DBI (>= 0.2-5),
ff,
graphics,
methods,
splines,
stats,
utils
survival, limma, Hmisc, gplots, Category, AnnotationDbi, hopach, biomaRt, GSEABase, genefilter, xtable, annotate
GenomicRanges, IRanges, edgeR, DESeq, DBI,  RMySQL (>= 0.6-0)
methods, utils, Biobase, DBI, RSQLite, IRanges
gplots, biomaRt, multtest, IRanges, Biostrings, BSgenome,
GO.db,limma, AnnotationDbi
hwriter, methods, stringr, statmod (>= 1.4.12)
methods, plyr, qvalue, AnnotationDbi, DO.db
AnnotationDbi, IRanges (>= 1.1.6), annaffy, rtracklayer, bit,
Rsamtools
methods, AnnotationDbi, GO.db, org.Hs.eg.db, org.Ag.eg.db,
org.At.tair.db, org.Bt.eg.db, org.Ce.eg.db, org.Cf.eg.db,
org.Dm.eg.db, org.Dr.eg.db, org.EcK12.eg.db, org.EcSakai.eg.db,
org.Gg.eg.db, org.Mm.eg.db, org.Mmu.eg.db, org.Pf.plasmo.db,
org.Pt.eg.db, org.Rn.eg.db, org.Sc.sgd.db, org.Sco.eg.db,
org.Ss.eg.db, org.Xl.eg.db
graphics, grDevices, reshape, stats, utils
methods, DBI, RSQLite, DNAcopy, survival
methods, DBI (>= 0.2-5), RSQLite (>= 0.8-1), IRanges,
GenomicRanges, Biostrings (>= 2.17.6), rtracklayer (>=
1.13.14), biomaRt, RCurl, utils, Biobase
graph, igraph, GSEABase, BioNet, cellHTS2, AnnotationDbi,
biomaRt
affy, Biobase, gplots, graphics, grDevices, limma, methods,
RColorBrewer, stats, utils
plyr, graphics, xcms, IRanges, preprocessCore, vsn, grid,
reshape
graphics, grid, IRanges, lattice, methods, rGADEM, stats,
utils
graphics, grDevices, igraph, MASS, methods, pvclust, stats,
utils
AnnotationDbi, Biobase, Category, GO.db, graph, graphics,
GSEABase, KEGG.db, methods, ScISI, stats
IRanges, GenomicRanges, BSgenome, methods, graphics,
grDevices, stats
Biobase, biomaRt, Biostrings, BSgenome, IRanges (>= 1.11.3),
methods, R2HTML, Rsamtools, rtracklayer, ShortRead
AnnotationDbi, Biostrings, ChIPpeakAnno, graphics,
IRanges,multtest, stats, utils
GenomicRanges, IRanges, BSgenome, gplots, grid, MASS,
gsmoothr, edgeR, DNAcopy, Ringo, aroma.affymetrix, zoo
Biostrings, graphics, grDevices, IRanges, methods, ShortRead,
stats
methods, utils, IRanges, GenomicRanges, Biostrings, zlibbioc,
rtracklayer, bitops
AnnotationDbi, Biobase, GO.db, ScISI, graphics, lattice,
methods, stats
Biobase (>= 2.7.4), graphics, grDevices, methods, oligoClasses
(>= 1.9.52), stats, utils
IRanges, GenomicRanges, Biostrings, Biobase, hwriter,
Rsamtools, zlibbioc, lattice
SNPchip (>= 1.15.0), stats, Biobase, lattice, utils, IRanges,
grid
AnnotationDbi, Biobase, BSgenome, GenomicFeatures, IRanges (>=
1.11.17), snpStats, DBI
Biobase, genefilter, graphics, grDevices, gtools, MergeMaid,
methods, stats, utils, mvtnorm
affxparser (>= 1.16.0), gcrma, affy, graphics, methods,
Biobase
affyio (>= 1.13.3), Biobase (>= 2.5.5), BiocInstaller,
graphics, grDevices, methods, preprocessCore, stats, utils,
zlibbioc
biomaRt, limma, GOstats, annotate, annaffy, genefilter, gcrma,
splines, xtable, AnnotationDbi
Biobase, AnnotationDbi, DBI, xtable, graphics, utils, stats,
methods
affy, affyPLM (>= 1.27.3), beadarray, Biobase, Cairo (>=
1.4-6), genefilter, graphics, grDevices, grid, Hmisc, hwriter,
lattice, latticeExtra, limma, methods, RColorBrewer, setRNG,
simpleaffy, stats, SVGAnnotation (>= 0.9-0), utils, vsn, XML
Rgraphviz, geneplotter, graph, IRanges, methods
methods, scales, RColorBrewer, dichromat, IRanges,
GenomicRanges, Biostrings
BSgenome, Biobase, oligo (>= 1.11.31), oligoClasses(>=
1.9.42), ff, preprocessCore, methods, stats, Biostrings,
IRanges, siggenes, nor1mix, gtools, grDevices, graphics, utils
BSgenome, GenomicRanges, IRanges, lattice, methods, ShortRead,
stats
methods, DBI, qvalue, AnnotationDbi, GO.db, KEGG.db,
org.Hs.eg.db, org.Mm.eg.db, org.Sc.sgd.db
affyio (>= 1.19.2), ellipse, ff (>= 2.2-1), genefilter (>=
1.33.0), mvtnorm, preprocessCore (>= 1.13.4), splines, stats,
SNPchip, utils, lattice
Biobase, flowCore, flowViz, graphics, grDevices, methods,
stats
rrcov, flowClust,flowCore, graphics, methods, stats,
utils
MASS, flowViz, flowCore, fda (>= 2.2.6), Biobase, methods,
grDevices, graphics, stats, utils, KernSmooth, lattice
Biobase, Rgraphviz, XML, flowCore, graph, graphics, lattice,
methods, stats, utils
Biobase, MASS, DBI, affy, methods, oligo, oligoClasses,
preprocessCore, utils
Biobase, DNAcopy, graphics, IRanges, methods, stats,
GenomicRanges, BSgenome, Biostrings, bigmemory
methods, biovizBase, ggplot2, IRanges, GenomicRanges,
GenomicFeatures, Rsamtools, BSgenome, gridExtra, scales
affy (>= 1.23.4), methylumi, annotate, Biobase (>= 2.5.5),
mgcv (>= 1.4-0), hdrcde, KernSmooth, preprocessCore, RSQLite,
DBI, AnnotationDbi, MASS, graphics, stats, methods
Biobase, graphics, lattice, annotate, genefilter,
AnnotationDbi
beanplot, RColorBrewer, nor1mix, siggenes, limma,
preprocessCore, crlmm, matrixStats
Biobase, GenomicRanges, graphics, IRanges, methods, ShortRead,
stats
graphics, Biostrings (>= 2.19.0), affyio (>= 1.19.2), IRanges
affyio (>= 1.19.4), affxparser (>= 1.23.1), Biobase (>=
2.11.8), Biostrings, DBI (>= 0.2-5), ff, graphics, methods,
preprocessCore (>= 1.13.5), splines, stats, utils, zlibbioc
survival, limma, Hmisc, gplots, Category, AnnotationDbi,
hopach, biomaRt, GSEABase, genefilter, xtable, annotate, mgcv,
SNPchip, hgu133a.db
Biobase, methods, AnnotationDbi, gplots, graphics, puma,
stats, utils, annotate, DBI, RSQLite
methods, BiocGenerics, AnnotationDbi, Biostrings, S4Vectors,
IRanges, Rsamtools, GenomicFeatures, Gviz, lattice,
GenomeInfoDb
methods, utils, DBI, RSQLite, stats4, BiocGenerics, Biobase,
S4Vectors
methods, utils, DBI, RSQLite, BiocGenerics, S4Vectors, Biobase
methods, stats, BiocGenerics, S4Vectors, IRanges, XVector,
GenomeInfoDb, GenomicRanges, Biostrings, Rsamtools, rtracklayer
methods, BiocGenerics, Biobase, S4Vectors, IRanges,
GenomicRanges, rtracklayer, parallel, betareg, lokern, Formula,
globaltest
biocViews (>= 1.33.7), BiocInstaller, graph, devtools (>=
1.4.1), httr, knitr, tools, optparse, codetools, methods
parallel, foreach, tools, BatchJobs, BBmisc, BiocGenerics
utils, Rsamtools, GenomicRanges, IRanges, data.table,
beanplot, rtracklayer, som, VGAM
methods, utils, stats, stats4, BiocGenerics, graph, Biobase,
AnnotationDbi, RBGL, GSEABase (>= 1.19.3), genefilter, annotate
(>= 1.15.6)
Rsamtools, GenomeInfoDb, GenomicRanges, rtracklayer, idr
sva, IlluminaHumanMethylation450kmanifest, limma, RPMM,
DNAcopy, preprocessCore, impute, marray, wateRmelon,plyr
BiocGenerics (>= 0.11.3), S4Vectors (>= 0.1.0), IRanges (>=
1.99.17), Rsamtools (>= 1.17.28), GenomicAlignments (>=
1.1.16), chipseq (>= 1.12.0), gtools, BiocParallel, methods,
reshape2, Nozzle.R1, Biobase, grDevices, stats, utils
BiocGenerics, AnnotationDbi, data.table, IRanges,
GenomeInfoDb, GenomicRanges, GenomicFeatures, ggplot2, gplots,
grDevices, gtools, methods, plotrix, plyr, RColorBrewer,
rtracklayer, S4Vectors, TxDb.Hsapiens.UCSC.hg19.knownGene
BiocGenerics, zlibbioc, Rcpp (>= 0.11.0)
rjson, graphics, methods, stats, RCurl, DBI, digest,
BiocGenerics, Rcpp (>= 0.11.0)
rtracklayer, Rgraphviz, ggplot2, GenomicFeatures,
TxDb.Mmusculus.UCSC.mm9.knownGene, pcaMethods, reshape2,
pathview
plyr, utils, ggplot2, Nozzle.R1, coda, edgeR
BiocGenerics (>= 0.7.5), Biobase, BiocParallel, genefilter,
methods, locfit, geneplotter, ggplot2, Hmisc
annotate, annotationTools, biomaRt, Biobase, BiocGenerics,
corpcor, GenomicRanges, hwriter, IRanges, mclust,
MUGAExampleData, org.Hs.eg.db, org.Mm.eg.db, QTLRel, Rsamtools,
RUnit, XML
methods, plyr, qvalue, stats4, AnnotationDbi, DO.db, igraph,
scales, reshape2, graphics, GOSemSim, grid, ggplot2
RColorBrewer, amap, edgeR (>= 2.3.58), gplots, grDevices,
stats, utils, IRanges, zlibbioc, lattice, S4Vectors
BiocGenerics (>= 0.7.1), methods, graphics, grDevices, stats,
abind, tiff, jpeg, png, locfit
methods, graphics, BiocGenerics, IRanges (>= 1.13.9), DESeq,
aroma.light, Rsamtools (>= 1.5.75)
KEGGREST, MASS, RColorBrewer, Rgraphviz, SPIA, graph, limma,
mixtools, neaGUI, qvalue, safe, stringr
igraph (>= 0.6), hwriter, R.utils, XML, plotrix, reshape2,
RColorBrewer, png
DESeq2, Biobase, Biostrings, GenomicRanges, Rsamtools, ggbio,
reshape2, rtracklayer, fda, GenomicAlignments, gtools, Matrix
limma, genefilter, Biobase, BiocGenerics, Matrix,
AnnotationDbi, digest, GenomicRanges
methods, utils, stats, BiocGenerics, snpStats, ff, Rsamtools,
AnnotationDbi, Biobase, bit, VariantAnnotation, hexbin,
rtracklayer, Gviz, stats4, S4Vectors, IRanges, GenomeInfoDb,
GenomicRanges, iterators, Biostrings, ROCR, biglm, ggplot2,
reshape2
BiocGenerics, S4Vectors, IRanges, ShortRead, rtracklayer,
ggplot2
methods, stats, stats4, AnnotationDbi (>= 0.0.89), Biobase (>=
1.15.29), Category (>= 2.3.26), GO.db (>= 1.13.0), RBGL,
annotate (>= 1.13.2), graph (>= 1.15.15), AnnotationForge
methods, BiocGenerics, Biobase, GSEABase (>= 1.17.4)
methods, DBI, RSQLite, GWASExactHW, DNAcopy, survival,
sandwich, lmtest, quantsmooth
methods, stats, BiocGenerics, S4Vectors, IRanges,
GenomicRanges, Biostrings, Rsamtools, BiocParallel
Rsamtools, GenomicRanges, IRanges, data.table, stringr,
rtracklayer, ggplot2, gridExtra, methods, igraph, plotrix
Rcpp (>= 0.11.2), BiocGenerics, S4Vectors, Biobase
XVector (>= 0.5.7), rtracklayer (>= 1.25.13), lattice,
RColorBrewer, biomaRt (>= 2.11.0), AnnotationDbi (>= 1.27.5),
Biobase (>= 2.15.3), GenomicFeatures (>= 1.17.22), BSgenome (>=
1.33.1), Biostrings (>= 2.33.11), biovizBase (>= 1.13.8),
Rsamtools (>= 1.17.28), latticeExtra (>= 0.6-26), matrixStats
(>= 0.8.14), GenomicAlignments (>= 1.1.16)
BiocGenerics (>= 0.2.0), IRanges (>= 1.21.39), GenomicRanges
(>= 1.7.12), Rsamtools (>= 1.8.5), Biostrings (>= 2.24.1),
chipseq (>= 1.6.1), hwriter (>= 1.3.0), Cairo (>= 1.5.5),
GenomicFeatures (>= 1.9.31), BiocParallel, parallel, tools,
rtracklayer (>= 1.17.19), GenomicAlignments, VariantTools (>=
1.7.7)
Rcpp, tkrplot, multtest, relimp, gdata, geneplotter,
RColorBrewer, Iso, IsoGene, ORCME, ORIClust, orQA, goric, xlsx,
ff, Biobase
methods, Formula, data.table, pracma, MCMCpack, coda, modeest,
testthat, Rcpp, scales
gdata, pls, sfsmisc, MASS, rpart, rda, genefilter
shiny (>= 0.11), mzID (>= 1.2), MSGFplus, shinyFiles (>=
0.4.0), xlsx, tools
MSnbase (>= 1.12.1), mzID (>= 1.3.5), R.cache, foreach,
doParallel, parallel, reshape2, methods, iterators, data.table,
Biobase, mzR
plyr, IRanges, preprocessCore, vsn, grid, reshape2, stats4,
affy, impute, pcaMethods, mzID (>= 1.1.5), MALDIquant (>=
1.9.8), digest, lattice, ggplot2
methods, AnnotationDbi (>= 1.16.10), RSQLite, Biobase
methods, matrixStats, BiocParallel, shiny, ggplot2,
RColorBrewer, minfi, IlluminaHumanMethylation450kmanifest,
FDb.InfiniumMethylation.hg19
oligoClasses, S4Vectors, VanillaICE (>= 1.28.1), Biobase,
DNAcopy, BiocGenerics, ff, foreach, matrixStats, IRanges,
lattice, GenomicRanges (>= 1.18.1), GenomeInfoDb, data.table,
grid
methods, parallel, Xmisc (>= 0.2.1), rbamtools (>= 2.6.0),
changepoint (>= 1.1.5)
BiocGenerics, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb,
fda, CSAR, ICSNP
Rcpp (>= 0.11.1), parallel, data.table, graph, Rgraphviz
BiocGenerics, graph, RBGL, AnnotationDbi, stats
e1071, limma, MASS, mRMRe, randomForest, ROCR, sva
cleaver (>= 1.3.6), Biobase, Biostrings, IRanges, S4Vectors,
mzID, mzR (>= 1.99.1), MSnbase (>= 1.13.5), Pviz
biovizBase, Biostrings, GenomicRanges, IRanges, data.table,
methods
methods, zlibbioc, BiocGenerics, S4Vectors, IRanges,
BiocInstaller, Biobase, Biostrings, GenomicRanges, BSgenome,
Rsamtools (>= 1.13.1), GenomicFeatures (>= 1.17.13), ShortRead
(>= 1.19.1), GenomicAlignments
IRanges, ggbio, ggplot2, exomeCopy, SomaticSignatures,
Rsamtools, shiny, methods, VGAM, dplyr, reshape2, GenomeInfoDb,
S4Vectors
DOSE, AnnotationDbi, reactome.db, org.Hs.eg.db, igraph,
graphite
S4Vectors, IRanges (>= 1.20.0), GenomeInfoDb, GenomicRanges,
GenomicAlignments, BSgenome, gplots, grid, MASS, gsmoothr,
edgeR (>= 3.4.0), DNAcopy, Ringo, aroma.affymetrix, Rsolnp,
parallel, Biostrings, Rsamtools, cluster, rtracklayer
Biobase,hwriter,Category,GOstats,limma(>=
3.17.5),lattice,AnnotationDbi,edgeR, annotate,PFAM.db,
GSEABase, BiocGenerics(>= 0.1.6), grid, XML, R.utils, DESeq2(>=
1.3.41), ggplot2, ggbio, IRanges
R.utils, Biobase, rpx, biocViews, BiocInstaller,
interactiveDisplay, shiny
affy, boot, impute, splines, graphics, qvalue, reshape2
BiocGenerics, Biostrings, IRanges, methods, reshape2,
S4Vectors, knitr (>= 1.7), BiocStyle
methods, utils, stats, stats4, BiocGenerics
AnnotationDbi, BiocGenerics, Biostrings, GenomicAlignments,
GenomicFeatures, GenomeInfoDb, igraph, parallel, Rsamtools,
rtracklayer, S4Vectors (>= 0.2.3)
graphics, lattice, grid, foreach, utils, methods, oligoClasses
(>= 1.21.12), Biobase, GenomicRanges, IRanges, GenomeInfoDb
methods, utils, S4Vectors, IRanges, GenomicRanges, BSgenome
Biobase, gridExtra, ggplot2, methods, grid, MASS, calibrate,
gplots
methods, Biostrings, GenomicRanges, IRanges, S4Vectors,
VariantAnnotation
Biobase, S4Vectors (>= 0.2.2), IRanges (>= 1.99.27),
GenomeInfoDb (>= 1.1.19), GenomicRanges (>= 1.17.39), hwriter,
methods, zlibbioc, lattice, latticeExtra,
S4Vectors, IRanges, GenomeInfoDb, Biostrings, ggplot2, ggbio,
reshape2, NMF, pcaMethods, Biobase, methods, proxy
ggplot2, shiny, plyr, grid, fastICA, igraph, TSP, combinat,
mgcv, gplots
methods, BiocGenerics, S4Vectors, Hmisc, minqa, stats, Biobase
(>= 0.3.2), plyr, IRanges
R.utils, edgeR, DESeq2, GenomicRanges, igraph, DESeq, fields,
limma, TeachingDemos, SPIA, clipper, topologyGSA
Biobase, oligoClasses (>= 1.24.0), IRanges (>= 1.14.0),
S4Vectors, foreach, matrixStats, data.table, grid, lattice,
methods, GenomeInfoDb, crlmm
utils, DBI, zlibbioc, Biobase, S4Vectors (>= 0.2.3), IRanges
(>= 2.0.1), XVector (>= 0.5.6), Biostrings (>= 2.33.5),
AnnotationDbi (>= 1.27.9), BSgenome, rtracklayer (>= 1.25.16),
GenomicFeatures (>= 1.17.13)
DBI, RSQLite (>= 1.0.0), Biobase, S4Vectors, IRanges (>=
1.99.17), AnnotationDbi, BiocParallel, Biostrings (>= 2.33.11),
GenomeInfoDb (>= 1.2.2), GenomicRanges (>= 1.17.19),
GenomicFeatures, Rsamtools (>= 1.17.8), BSgenome,
BSgenome.Hsapiens.UCSC.hg19, VariantAnnotation (>= 1.12.2),
shiny
Rsamtools (>= 1.17.6), BiocGenerics, Biostrings, parallel,
gmapR (>= 1.7.2), GenomicFeatures (>= 1.17.13), Matrix,
rtracklayer (>= 1.25.3), BiocParallel, GenomeInfoDb, BSgenome
biomaRt, limma, GOstats, annotate, annaffy, genefilter, gcrma,
splines, xtable, AnnotationDbi, lattice, gplots, oligoClasses,
ReportingTools, hwriter
limma, tcltk, affy, BiocInstaller, affyio, R2HTML, xtable,
gcrma, AnnotationDbi
Biobase, DBI, xtable, graphics, utils, stats, methods,
BiocGenerics (>= 0.11.2)
affy, affyPLM (>= 1.27.3), beadarray, Biobase, Cairo (>=
1.4-6), genefilter, graphics, grDevices, grid, gridSVG (>=
1.4-3), Hmisc, hwriter, lattice, latticeExtra, limma, methods,
RColorBrewer, setRNG, stats, SVGAnnotation (>= 0.9-0), utils,
vsn (>= 3.23.3), XML
GenomicRanges (>= 1.17.25), IRanges (>= 1.99.22), S4Vectors
(>= 0.1.2), RColorBrewer, splines, sva, limma, rtracklayer (>=
1.25.13), Biobase (>= 2.25.0), GenomeInfoDb
BiocGenerics, Biobase, methods, grid, graphics, NMF
methods, grDevices, stats, scales, Hmisc, RColorBrewer,
dichromat, BiocGenerics, S4Vectors (>= 0.2.4), IRanges (>=
1.99.28), GenomeInfoDb (>= 1.1.3), GenomicRanges (>= 1.17.19),
Biostrings (>= 2.33.11), Rsamtools (>= 1.17.28),
GenomicAlignments (>= 1.1.16), GenomicFeatures (>= 1.17.13),
AnnotationDbi, VariantAnnotation (>= 1.11.4)
beadarray(>= 2.0.0), Biobase(>= 2.0.0), BiocGenerics,
grDevices, stats, graphics
BiocGenerics, EBarrays, gaga, gtools, GenomeInfoDb,
GenomicFeatures, limma, mgcv, Rsamtools, rtracklayer,
S4Vectors, sqldf, survival, VGAM
chipenrich.data, methods, GenomicRanges (>= 1.10.0), IRanges
(>= 1.16.0), mgcv, plyr (>= 1.7.0), lattice, latticeExtra,
grid, stringr (>= 0.6), rms
methods, stats4, plyr, ggplot2, AnnotationDbi, GO.db, KEGG.db,
DOSE, GOSemSim
AnnotationDbi, BiocGenerics, Biostrings, Rsamtools, parallel,
grDevices, gplots, IRanges, GenomicFeatures, XVector,
methylPipe, GO.db, S4Vectors, GenomeInfoDb
methods, Biobase (>= 2.15.4), BiocGenerics, affyio (>=
1.23.2), illuminaio, ellipse, mvtnorm, splines, stats, SNPchip,
utils, lattice, ff, foreach, RcppEigen (>= 0.3.1.2.1),
matrixStats, VGAM, parallel
Rsamtools, edgeR, limma, GenomicFeatures, AnnotationDbi,
methods, GenomicAlignments, S4Vectors, IRanges, GenomeInfoDb
IRanges, GenomicRanges, Rsamtools (>= 1.10.2),
GenomicAlignments, Biostrings (>= 2.26.3), GenomicFeatures (>=
1.17.13), biomaRt (>= 2.17.1), stringr, RCurl, plyr,
VariantAnnotation (>= 1.7.28), rtracklayer, RSQLite,
AnnotationDbi
derfinder (>= 1.0.0), GenomeInfoDb (>= 1.2.2),
GenomicFeatures, GenomicRanges (>= 1.17.40), ggbio (>=
1.13.13), ggplot2, IRanges (>= 1.99.28), plyr, RColorBrewer,
reshape2, scales
AnnotationDbi (>= 1.27.9), BiocParallel, bumphunter (>=
1.3.3), derfinderHelper (>= 1.0.0), GenomeInfoDb (>= 1.2.2),
GenomicAlignments, GenomicFeatures, GenomicFiles, GenomicRanges
(>= 1.17.40), Hmisc, IRanges (>= 1.99.28), qvalue, Rsamtools,
rtracklayer, S4Vectors (>= 0.2.3)
Biobase (>= 2.26.0), BiocGenerics (>= 0.12.1), biomaRt (>=
2.22.0), Biostrings (>= 2.34.1), DESeq (>= 1.18.0), edgeR (>=
3.8.5), genomeIntervals (>= 1.22.0), GenomicAlignments (>=
1.2.1), GenomeInfoDb (>= 1.2.4), GenomicRanges (>= 1.18.4),
graphics, IRanges (>= 2.0.1), LSD (>= 3.0), methods, parallel,
Rsamtools (>= 1.18.2), S4Vectors (>= 0.4.0), ShortRead (>=
1.24.0), utils
S4Vectors, httpuv (>= 1.3.0), rjson, OrganismDbi, R6 (>=
2.0.0), mime (>= 0.2), GenomeInfoDb, GenomicFeatures
edgeR, gplots, grid, gtools, limma, locfit, MASS, plyr,
QuasiSeq, qvalue, reshape2, ROCR, scales, stringr
annotate, data.table, DOSE, FactoMineR, GO.db, GOstats,
graphite, igraph, IRanges, MASS, nnet, reshape2, Rgraphviz,
scales
methods, flowCore, EBImage, vegan, hexbin, ggplot2, grid
flowCore, graphics, car, gplots, RFOC, GEOmap, methods,
grDevices
Biobase, BiocGenerics, graph, graphics, lattice, methods,
stats, stats4, utils, RBGL, XML, IDPmisc,
Cairo, tools,gridExtra,Rgraphviz ,data.table ,plyr
,latticeExtra ,Rcpp ,RColorBrewer
AnnotationDbi, annotate, Biobase, graphics, methods, stats,
survival
S4Vectors (>= 0.2.3), GenomeInfoDb (>= 1.1.3), IRanges,
methods, graphics
grid, grDevices, graphics, stats, utils, biovizBase (>=
1.13.8), reshape2, gtable, Biobase, S4Vectors (>= 0.2.3),
IRanges (>= 1.99.28), GenomeInfoDb (>= 1.1.3), GenomicRanges
(>= 1.17.40), Biostrings, Rsamtools (>= 1.17.28),
GenomicAlignments (>= 1.1.16), BSgenome, gridExtra, scales,
VariantAnnotation (>= 1.11.4), Hmisc, rtracklayer (>= 1.25.16),
GenomicFeatures (>= 1.17.13), OrganismDbi, GGally
S4Vectors, IRanges, Rsamtools (>= 1.17.8), rtracklayer (>=
1.25.5), GenomicFeatures (>= 1.17.13), Biostrings,
VariantAnnotation (>= 1.11.4), tools, Biobase, BSgenome,
GenomicAlignments (>= 1.1.9), BiocParallel
mgcv, graphics, stats, utils, AnnotationDbi,
GO.db,BiocGenerics
stats, stats4, tools, utils, BiocGenerics (>= 0.1.11)
methods, BiocGenerics, S4Vectors, IRanges, GenomeInfoDb,
GenomicRanges, snpStats, Biostrings, Rsamtools, rtracklayer
rhdf5, reshape, S4Vectors, IRanges, Biostrings, Rsamtools,
methods, GenomicRanges, abind, BiocParallel, BatchJobs,
h5vcData, GenomeInfoDb
foreach, iterators, rtracklayer, plyr, BSgenome, ggplot2,
scales
interactiveDisplayBase, shiny, RColorBrewer, ggplot2,
reshape2, plyr, gridSVG, XML, Category, AnnotationDbi
methods, Rcpp (>= 0.11.2), Matrix, XVector (>= 0.5.8),
S4Vectors (>= 0.2.4), e1071, LiblineaR
qtl, GenABEL, MASS, outliers, graphics, stats, utils
lumi, methylumi, Gviz, genoset, GenomicRanges, IRanges,
rtracklayer, GenomicFeatures, annotate, Biobase (>= 2.5.5),
AnnotationDbi, genefilter, biomaRt, methods, parallel
marray, gplots, IRanges, BiocGenerics, Gviz,
GenomicAlignments, Biostrings, parallel, data.table,
GenomeInfoDb, S4Vectors
BiocGenerics, S4Vectors, IRanges, GenomeInfoDb, GenomicRanges,
Biobase, graphics, lattice, annotate, genefilter,
AnnotationDbi, minfi, stats4, illuminaio
DBI, RSQLite, stringr, sqldf, plyr, methods
S4Vectors, IRanges, beanplot, RColorBrewer, nor1mix, siggenes,
limma, preprocessCore, illuminaio, matrixStats, mclust,
genefilter, nlme, reshape, MASS, quadprog
limma, minfi, methylumi, IlluminaHumanMethylation450kmanifest,
statmod
BiocGenerics, cluster, combinat, fastICA, grid, irlba,
matrixStats, methods, parallel, reshape2, stats, utils, limma
gProfileR, stringr, topGO, GOstats, annotate, AnnotationDbi,
graph
httr (>= 0.3), jsonlite (>= 0.9.7), S4Vectors, Hmisc, sqldf
methods, BiocGenerics, S4Vectors, IRanges, Biobase, ShortRead,
GenomicRanges, stats
BiocGenerics (>= 0.3.2), Biobase (>= 2.17.8), methods,
graphics, IRanges (>= 1.13.30), GenomicRanges, Biostrings (>=
2.23.6), affyio (>= 1.23.2), ff, foreach, BiocInstaller, utils,
S4Vectors
som, fastICA, scatterplot3d, pixmap, fdrtool, ape, igraph,
KernSmooth, parallel, biomaRt, Biobase
pRolocdata, shiny (>= 0.9.1), tools (>= 3.1.0)
mclust (>= 4.3), caret, e1071, sampling, class, kernlab,
lattice, nnet, randomForest, proxy, FNN, BiocGenerics, stats,
RColorBrewer, scales, MASS, knitr, mvtnorm
Biostrings (>= 2.21.11), IRanges (>= 1.11.31), S4Vectors
limma, fields, GenomicRanges, ggplot2, plyr, tools, methods,
data.table
Streamer, DBI, RSQLite (>= 1.0.0), IRanges, reshape2, plyr,
RColorBrewer,ggplot2
Biostrings (>= 2.32.0), IRanges, S4Vectors
rTANDEM, plyr, seqinr, Nozzle.R1, ggplot2, reshape2, parallel,
Rcpp (>= 0.11.1)
Biobase, methods, knitr, tools, Nozzle.R1, xtable, pander,
S4Vectors
methods, parallel, Matrix (>= 1.0), grid, annotate, graph (>=
1.44.0), Biobase, S4Vectors, BiocParallel, AnnotationDbi,
IRanges, GenomeInfoDb, GenomicRanges, GenomicFeatures, mvtnorm,
qtl, Rgraphviz
Biobase, minfi, doParallel, foreach, iterators, ggplot2,
methods
shiny (>= 0.9), rTRM, MotifDb, org.Hs.eg.db, org.Mm.eg.db
derfinder (>= 1.0.0), derfinderPlot (>= 1.0.0), devtools (>=
1.6), GenomeInfoDb, GenomicRanges, ggbio (>= 1.13.13), ggplot2,
grid, gridExtra, IRanges, knitcitations (>= 1.0.1), knitr (>=
1.6), knitrBootstrap (>= 0.9.0), mgcv, RColorBrewer, rmarkdown
(>= 0.3.3)
GenomicRanges, GenomicAlignments(>= 0.99.4), methods,
rtracklayer, S4Vectors
XML, XMLSchema (>= 0.6.0), SSOAP (>= 0.8.0), Biobase, utils
methods, IRanges, BSgenome, digest, rtracklayer,
GenomicRanges, Biostrings, shiny (>= 0.11.0), DBI, RSQLite,
RJSONIO, plotrix, fields, grid, kohonen, Cairo, parallel,
GenomeInfoDb, class, S4Vectors, ggplot2, reshape2, gridExtra
GenomicRanges, gbm, Hmisc, stats, graphics
graphics, grDevices, stats, utils, BiocGenerics, zlibbioc
hwriter, RColorBrewer, lattice, qvalue, multtest, utils,
Biobase, knitr, Biostrings, cleaver, BiocParallel
BiocGenerics, rjson, grid, ggplot2, limma, edgeR, DESeq2,
GOstats, GO.db, annotate, pheatmap, BatchJobs
methods, AnnotationDbi, gplots, graphics, stats, utils,
annotate, DBI, RSQLite
IRanges, GenomicRanges, XVector, Rsamtools, XML, tractor.base,
stringr, RColorBrewer, methods
Biostrings, foreach, GenomicFeatures, ggplot2, Hmisc, IRanges,
mclust, rtracklayer, seqinr, stringr, wmtsa
methods, BiocGenerics, AnnotationDbi, Biostrings, S4Vectors,
IRanges, Rsamtools, GenomicFeatures, Gviz, lattice, seqinr,
GenomeInfoDb, VariantAnnotation
utils, methods, RSQLite, BiocInstaller, BiocGenerics,
S4Vectors, interactiveDisplayBase, httr, AnnotationDbi
methods, BiocGenerics, Biobase, S4Vectors, IRanges,
GenomeInfoDb, GenomicRanges, rtracklayer, parallel, betareg,
lokern, Formula, globaltest
igraph (>= 1.0.1), AnnotationDbi, Biobase
GenomicRanges, IRanges, plyr, geosphere, mixdist, dplyr, shape
fields, grid, irlba, lattice, signal, sp, stats4, utils
sva, IlluminaHumanMethylation450kmanifest, limma, RPMM,
DNAcopy, preprocessCore, impute, marray, wateRmelon, plyr,
IRanges, GenomicRanges
BiocGenerics (>= 0.1.0), GO.db, BSgenome, GenomicFeatures,
AnnotationDbi, limma, multtest, RBGL, graph, BiocInstaller,
stats
BiocGenerics, boot, AnnotationDbi, IRanges, GenomeInfoDb,
GenomicRanges, GenomicFeatures, ggplot2, gplots, grDevices,
gtools, methods, plotrix, dplyr, parallel, plyr, magrittr,
RColorBrewer, rtracklayer, S4Vectors,
TxDb.Hsapiens.UCSC.hg19.knownGene
Biostrings, fBasics, GenomicRanges, IRanges, graphics,
grDevices, HilbertVis, ShortRead, stats, timsac, utils
rjson, graphics, stats, RCurl, DBI, digest, BiocGenerics, Rcpp
(>= 0.11.0), ggplot2
methods, circlize (>= 0.2.3), GetoptLong, colorspace,
RColorBrewer
matrixStats, gtools, data.table, S4Vectors, chipseq, IRanges,
Rsamtools, DNAcopy, GenomicAlignments, GenomicRanges,
CopyhelpeR, GenomeInfoDb, futile.logger
methods, DBI, S4Vectors, IRanges, XVector
annotate, annotationTools, biomaRt, Biobase, BiocGenerics,
corpcor, GenomicRanges, hwriter, IRanges, mclust,
MUGAExampleData, org.Hs.eg.db, org.Mm.eg.db, QTLRel, Rsamtools,
RUnit, XML, S4Vectors
RColorBrewer, amap, edgeR (>= 2.3.58), gplots, grDevices,
stats, utils, IRanges, zlibbioc, lattice, systemPipeR, tools
grid, TSP, limma, rhdf5, knitr, abind, gplots, igraph
BiocGenerics (>= 0.7.1), methods, graphics, grDevices, stats,
abind, tiff, jpeg, png, locfit, fftwtools (>= 0.9-7)
AnnotationDbi, ComplexHeatmap, DESeq2, EDASeq, GenomicRanges,
GO.db, KEGGREST, KEGGgraph, MASS, PathNet, ReportingTools,
Rgraphviz, S4Vectors, SparseM, SPIA, biocGraph, biomaRt, edgeR,
geneplotter, graph, hwriter, limma, mixtools, neaGUI, npGSEA,
safe, stringr, topGO
org.Hs.eg.db, AnnotationDbi, topGO, cluster, flexmix, RBGL,
graph, Matrix, corpcor, Rcpp
methods, ncdf, gdsfmt, DBI, RSQLite, GWASExactHW, DNAcopy,
survival, sandwich, lmtest, logistf, quantsmooth
methods, utils, tools, DBI (>= 0.2-5), RSQLite (>= 0.8-1),
RCurl, XVector, Biostrings (>= 2.23.3), rtracklayer (>=
1.25.2), biomaRt (>= 2.17.1), Biobase (>= 2.15.1)
Rsamtools, GenomicRanges, IRanges, BiocGenerics, data.table,
stringr, rtracklayer, GenomeInfoDb, ggplot2, gridExtra,
methods, igraph, plotrix, S4Vectors, dplyr
Rcpp (>= 0.11.2), S4Vectors, Biobase, IRanges
Biostrings, GenomeInfoDb, GenomicRanges, IRanges, httr, rjson,
Rsamtools, S4Vectors
GenomicAlignments, BSgenome, Rsamtools, rtracklayer, MASS,
parallel, GenomeInfoDb
XVector (>= 0.5.7), rtracklayer (>= 1.25.13), lattice,
RColorBrewer, biomaRt (>= 2.11.0), AnnotationDbi (>= 1.27.5),
Biobase (>= 2.15.3), GenomicFeatures (>= 1.17.22), BSgenome (>=
1.33.1), Biostrings (>= 2.33.11), biovizBase (>= 1.13.8),
Rsamtools (>= 1.17.28), latticeExtra (>= 0.6-26), matrixStats
(>= 0.8.14), GenomicAlignments (>= 1.1.16), GenomeInfoDb (>=
1.1.3), BiocGenerics (>= 0.11.3), digest(>= 0.6.8)
BiocGenerics (>= 0.2.0), IRanges (>= 1.21.39), GenomicRanges
(>= 1.7.12), Rsamtools (>= 1.8.5), Biostrings (>= 2.24.1),
chipseq (>= 1.6.1), hwriter (>= 1.3.0), Cairo (>= 1.5.5),
GenomicFeatures (>= 1.9.31), BiocParallel, parallel, tools,
rtracklayer (>= 1.17.19), GenomicAlignments, VariantTools (>=
1.6.1)
doParallel, lme4, Matrix, BiocGenerics, GenomicRanges,
IRanges, foreach, AnnotationDbi, S4Vectors, GenomeInfoDb
biomaRt, ENVISIONQuery, DAVIDQuery, AffyCompatible,
R.methodsS3, utils
AnnotationDbi, BSgenome, cleanUpdTSeq, Gviz, seqinr, limma,
IRanges, GenomeInfoDb
Rcpp, tkrplot, multtest, relimp, geneplotter, RColorBrewer,
Iso, IsoGene, ORCME, ORIClust, orQA, goric, ff, Biobase, jpeg
BiocGenerics, stats4, graphics, stats, utils, MASS, Biobase,
quantreg, limma, affy, SparseM, vsn, zlibbioc
cgdsr, parallel, stringr, reshape2, data.table, RColorBrewer,
methods, LowMACAAnnotation
GenomicRanges, Biostrings, graphics, gtools, IRanges, methods,
stats, utils, edgeR, DNAcopy, biomaRt, rtracklayer,
preprocessCore
methods, Formula, data.table, pracma, MCMCpack, coda, modeest,
testthat, Rcpp, scales, Kmisc
shiny, mzID (>= 1.2), MSGFplus, shinyFiles (>= 0.4.0), tools
MSnbase (>= 1.12.1), mzID (>= 1.3.5), R.cache, foreach,
doParallel, parallel, reshape2, methods, iterators, data.table,
Biobase, ProtGenerics
plyr, IRanges, preprocessCore, vsn, grid, reshape2, stats4,
affy, impute, pcaMethods, mzID (>= 1.5.2), MALDIquant (>=
1.12.0), digest, lattice, ggplot2, S4Vectors, Rcpp
RSQLite (>= 1.0.0), Biobase, AnnotationDbi, IRanges,
Biostrings, Rsamtools, GenomicRanges, VariantAnnotation
methods, TFBSTools, IRanges, XVector, Biostrings
Biobase, BiocParallel, BiocGenerics,
FDb.InfiniumMethylation.hg19, ggplot2, grid, gridBase, hexbin,
IlluminaHumanMethylation450kmanifest, matrixStats, minfi,
methods, RColorBrewer, shiny
methods, oligoClasses, S4Vectors, VanillaICE (>= 1.29.3),
Biobase, DNAcopy, BiocGenerics, ff, foreach, matrixStats,
IRanges, lattice, GenomicRanges (>= 1.17.16), GenomeInfoDb,
data.table, grid, stats
methods, parallel, Xmisc (>= 0.2.1), rbamtools (>= 2.6.0),
changepoint (>= 2.1.1)
BiocGenerics, graph, RBGL, AnnotationDbi, GenomicFeatures,
stats
limma, AnnotationDbi, GSA, foreach, doRNG, hgu133plus2.db,
hgu133a.db, KEGG.db, nlme
graphics, grDevices, MASS, methods, pvclust, stats, utils,
RedeR
methods, stats4, IRanges, GenomicRanges, graphics, grDevices,
stats, Rsamtools, GenomicAlignments, S4Vectors
methods, PICS, graphics, grDevices, stats, Gviz, fda,
BSgenome, stats4, BiocGenerics, IRanges, S4Vectors
cleaver (>= 1.3.6), Biobase, Biostrings, IRanges, S4Vectors,
mzID, mzR (>= 1.99.1), MSnbase (>= 1.15.5), Pviz, biomaRt,
GenomicRanges, rtracklayer
methods, car, nlme, nortest, MASS, logistf
methods, zlibbioc, BiocGenerics, S4Vectors, IRanges,
BiocInstaller, Biobase, Biostrings, BSgenome, Rsamtools (>=
1.19.38), GenomicFeatures (>= 1.17.13), ShortRead (>= 1.19.1),
GenomicAlignments, BiocParallel, GenomeInfoDb
parallel, clues, ggplot2, pheatmap, IRanges, clValid,
igraph,data.table,GenomicRanges,S4Vectors, DAVIDQuery,
ggbio,reshape2,Hmisc
BiocGenerics (>= 0.1.3), biomaRt, BSgenome, XVector, methods,
R2HTML, Rsamtools, ShortRead, VariantAnnotation, xtable, tools,
TeachingDemos, S4Vectors
methods, httpuv (>= 1.3.2), Rcpp (>= 0.11.5), jsonlite (>=
0.9.15), igraph, BiocGenerics
Biostrings(>= 2.32.1), GenomicRanges(>= 1.16.4), Rsamtools(>=
1.16.1), rtracklayer(>= 1.24.2)
corrplot, MASS, stats, lattice, grDevices, gridExtra,
snowfall, psych, BiocParallel, grid, bladderbatch, reshape2
DOSE, AnnotationDbi, reactome.db, igraph, graphite
BiocGenerics, Biostrings, IRanges, methods, S4Vectors, knitr
(>= 1.7), BiocStyle, plyr, markdown, grid, reshape2
AnnotationDbi, BiocGenerics, Biostrings, GenomicAlignments,
GenomicFeatures, GenomeInfoDb, igraph, parallel, Rsamtools,
rtracklayer, S4Vectors
methods, utils, IRanges, GenomeInfoDb, GenomicRanges, BSgenome
methods, utils, BiocGenerics, S4Vectors, IRanges,
GenomeInfoDb, GenomicRanges, BSgenome
Biobase, gridExtra, ggplot2, methods, grid, MASS, calibrate,
gplots, edgeR, limma, foreach, affy
AnnotationDbi, mclust, GenomicRanges, IRanges, zoo, squash,
pls,rtracklayer,ROCR,verification
methods, gdsfmt, GenomicRanges, IRanges, S4Vectors,
GWASExactHW, VariantAnnotation
Biobase, S4Vectors (>= 0.5.11), IRanges (>= 1.99.27),
GenomeInfoDb (>= 1.1.19), GenomicRanges (>= 1.17.39), hwriter,
methods, zlibbioc, lattice, latticeExtra,
methods, utils, igraph, BiocGenerics, S4Vectors, IRanges,
GenomeInfoDb, GenomicRanges, GenomicFeatures, Rsamtools,
GenomicAlignments, graph, Rgraphviz
Biostrings(>= 2.33.3), RSQLite(>= 0.11.4), seqLogo,
GenomicRanges(>= 1.17.7), caTools(>= 1.14), XVector(>= 0.5.8),
rtracklayer(>= 1.25.3), BSgenome(>= 1.30.0), S4Vectors(>=
0.2.3), IRanges(>= 1.99.28), methods, gtools(>= 3.0.0), CNEr(>=
0.99.8), BiocParallel(>= 0.5.6), DirichletMultinomial(>=
1.7.1), TFMPvalue(>= 0.0.5), BiocGenerics
VGAM, VennDiagram, reshape2, nls2, foreach, doParallel,
parallel
ggplot2, shiny, plyr, grid, fastICA, igraph, combinat, mgcv,
mclust, gplots
methods, BiocGenerics (>= 0.3.2), S4Vectors, Hmisc, minqa,
stats, Biobase (>= 0.3.2), plyr, IRanges
R.utils, methods, Biobase, parallel, edgeR, DESeq2,
GenomicRanges, RBGL, DESeq, fields, limma, TeachingDemos,
KEGGgraph, qpgraph, clipper
Rsamtools (>= 1.19.38), zlibbioc, gplots, IRanges
Biobase, oligoClasses (>= 1.24.0), IRanges (>= 1.14.0),
S4Vectors, foreach, matrixStats, data.table, grid, lattice,
methods, GenomeInfoDb, crlmm, tools
utils, DBI, zlibbioc, Biobase, S4Vectors (>= 0.5.14), IRanges
(>= 2.1.27), XVector (>= 0.5.6), Biostrings (>= 2.33.5),
AnnotationDbi (>= 1.27.9), BSgenome, rtracklayer (>= 1.25.16),
GenomicFeatures (>= 1.19.17)
DBI, RSQLite (>= 1.0.0), Biobase, S4Vectors, IRanges (>=
2.1.18), RBGL, graph, AnnotationDbi, BiocParallel, Biostrings
(>= 2.33.11), GenomeInfoDb (>= 1.3.6), GenomicRanges (>=
1.19.13), GenomicFeatures, Rsamtools (>= 1.17.8), BSgenome,
Gviz, shiny
Rsamtools (>= 1.17.6), BiocGenerics, Biostrings, parallel,
gmapR (>= 1.7.2), GenomicFeatures (>= 1.17.13), Matrix,
rtracklayer (>= 1.25.3), BiocParallel, GenomeInfoDb, BSgenome,
Biobase
methods, utils, S4Vectors, IRanges, GenomeInfoDb,
GenomicRanges, BSgenome
limma, GOstats, gcrma, splines, xtable, AnnotationDbi,
lattice, gplots, oligoClasses, ReportingTools, hwriter
limma, tcltk, affy, BiocInstaller, affyio, tkrplot, affyPLM,
R2HTML, xtable, gcrma, AnnotationDbi
Biobase, DBI, xtable, graphics, utils, stats, methods,
BiocGenerics (>= 0.13.8)
methods, BiocGenerics, Rcpp (>= 0.10.6), IRanges,
GenomicRanges, zlibbioc
grDevices, stats, scales, Hmisc, RColorBrewer, dichromat,
BiocGenerics, S4Vectors (>= 0.2.4), IRanges (>= 1.99.28),
GenomeInfoDb (>= 1.1.3), GenomicRanges (>= 1.17.19), Biostrings
(>= 2.33.11), Rsamtools (>= 1.17.28), GenomicAlignments (>=
1.1.16), GenomicFeatures (>= 1.17.13), AnnotationDbi,
VariantAnnotation (>= 1.11.4)
MASS, limma(>= 3.22.0), ridge, Biobase, nem
scales, stats, graphics, Biobase, locfit, gtools
matrixStats, limma, doRNG, BiocGenerics, utils,
GenomicFeatures, AnnotationDbi
GSEABase,GSEAlm,tkrplot, geNetClassifier,RUnit, Formula,
rpart, Biobase, phenoTest
AnnotationDbi, hwriter, GSEABase, Category (>= 2.33.1),
GOstats, annotate, colorspace, graph, RCytoscape (>= 1.5.11)
DOSE, GOSemSim, AnnotationDbi, methods, stats4, plyr, ggplot2,
GO.db, KEGGREST, magrittr, qvalue
colortools, hash, grDevices, gridExtra, rtracklayer, IRanges,
S4Vectors, GenomicRanges, ggbio, ggplot2, trackViewer
methods, seqinr, yaml, rtfbs, gplots, mclust, gmp,
BiocGenerics (>= 0.13.8), IRanges, Biostrings, BSgenome,
biomaRt
methods, class, foreach, parallel, doParallel, fastcluster,
corrplot, reshape2, devtools
AnnotationDbi, BiocGenerics, Biostrings, Rsamtools, parallel,
grDevices, gplots, IRanges, GenomicFeatures, XVector,
methylPipe, GO.db, S4Vectors, GenomeInfoDb, ggplot2
methods, stats, DNAcopy, rtracklayer, GenomicRanges, IRanges,
GenomeInfoDb
methods, corpcor, BiocParallel, ggplot2, plyr
IRanges, GenomicRanges, Rsamtools (>= 1.10.2),
GenomicAlignments, Biostrings (>= 2.26.3), GenomicFeatures (>=
1.17.13), biomaRt (>= 2.17.1), stringr, RCurl, plyr,
VariantAnnotation (>= 1.13.44), rtracklayer, RSQLite,
AnnotationDbi
tcltk, stats, Rtsne, e1071, flowCore, ggplot2, gplots, vegan,
reshape, Biobase
derfinder (>= 1.1.0), GenomeInfoDb (>= 1.3.3),
GenomicFeatures, GenomicRanges (>= 1.17.40), ggbio (>=
1.13.13), ggplot2, IRanges (>= 1.99.28), plyr, RColorBrewer,
reshape2, scales
AnnotationDbi (>= 1.27.9), BiocParallel, bumphunter (>=
1.7.6), derfinderHelper (>= 1.1.0), GenomeInfoDb (>= 1.3.3),
GenomicAlignments, GenomicFeatures, GenomicFiles, GenomicRanges
(>= 1.17.40), Hmisc, IRanges (>= 1.99.28), qvalue (>= 1.99.0),
Rsamtools, rtracklayer, S4Vectors (>= 0.2.3)
Rsamtools, Biostrings, BSgenome, rhdf5, edgeR, limma, csaw,
locfit, methods, IRanges, S4Vectors, GenomeInfoDb, BiocGenerics
Biobase (>= 2.28.0), BiocGenerics (>= 0.14.0), BiocParallel
(>= 1.2.7), biomaRt (>= 2.24.0), Biostrings (>= 2.36.1), DESeq
(>= 1.20.0), edgeR (>= 3.10.2), genomeIntervals (>= 1.24.1),
GenomicAlignments (>= 1.4.1), GenomeInfoDb (>= 1.4.1),
GenomicRanges (>= 1.20.5), graphics, IRanges (>= 2.2.5), LSD
(>= 3.0), methods, parallel, Rsamtools (>= 1.20.4), S4Vectors
(>= 0.6.1), ShortRead (>= 1.26.0), locfit, utils
methods, splines, sva, snm, qvalue(>= 1.99.0), MASS
methods, RSQLite, DBI, Biobase, GenomeInfoDb, AnnotationDbi,
rtracklayer, S4Vectors
methods, Matrix, IRanges, GenomicRanges, parallel
Biobase, BiocGenerics (>= 0.1.14), graph, graphics, methods,
rrcov, stats, utils, stats4, corpcor, Rcpp
Biobase, BiocGenerics (>= 0.1.6), graphics, grDevices,
methods, stats, stats4
flowCore, flowViz, graphics, kza, methods, minpack.lm, gplots
Biobase, BiocGenerics, graph, graphics, lattice, methods,
stats, stats4, utils, RBGL, XML, tools,gridExtra,Rgraphviz
,data.table ,plyr ,latticeExtra ,Rcpp ,RColorBrewer ,stringr
brew, BiocGenerics, annotate, AnnotationDbi, grDevices,
GSEABase, hwriter, parallel, yaml
Biobase, methods, GSEAlm, Category, Matrix (>= 1.0.9),
parallel, annotate, genefilter, AnnotationDbi, DESeq
GenomicRanges, methods, BatchJobs, BBmisc, S4Vectors, ff,
ffbase, BiocGenerics, foreach, doParallel
snpStats, GenomicRanges, VariantAnnotation, methods, Biobase,
BatchJobs, gQTLBase, GenomeInfoDb, S4Vectors, limma,
BiocGenerics, gam, dplyr, AnnotationDbi, IRanges,
GenomicFeatures, ggplot2, reshape2, doParallel, foreach
GenomicRanges, GenomicAlignments, IRanges, Rsamtools,
data.table, plyr, reshape2, ggplot2, methods, rtracklayer,
gridBase, impute
Matrix, glmnet, cellHTS2, Biobase, biomaRt, doParallel,
parallel, foreach, reshape2
ape, Biostrings, colorspace, EBImage, ggplot2, grid,
gridExtra, jsonlite, magrittr, methods, reshape2, stats4
methods, Biobase, Biostrings, graphics, grDevices, stats,
utils, IRanges (>= 1.3.53)
stats, stats4, tools, utils, BiocGenerics (>= 0.13.11)
methods, BiocGenerics, S4Vectors, IRanges, GenomeInfoDb,
GenomicRanges, snpStats, Biostrings, Rsamtools, rtracklayer,
gQTLstats, Gviz, VariantAnnotation
rhdf5, reshape, S4Vectors, IRanges, Biostrings, Rsamtools (>=
1.19.38), methods, GenomicRanges, abind, BiocParallel,
BatchJobs, h5vcData, GenomeInfoDb
sonicLength, plyr, GenomicRanges, BiocGenerics, rSFFreader
methods, stats, Rcpp (>= 0.11.2), Matrix, XVector (>= 0.7.3),
S4Vectors (>= 0.5.11), e1071, LiblineaR
limma, tcltk, BiocInstaller, tkrplot, R2HTML, xtable, gcrma,
AnnotationDbi
multtest, clusterSim, apcluster, limma, e1071, AnnotationDbi,
methods, parmigene,igraph,reactome.db
AnnotationDbi, DBI, GO.db, KEGG.db, cluster, Matrix
rtracklayer, gplots, biomaRt, tools, GenomicAlignments,
ggplot2, muStat, Rsamtools
lumi, methylumi, Gviz, genoset, GenomicRanges,
VariantAnnotation, IRanges, rtracklayer, GenomicFeatures,
annotate, Biobase (>= 2.5.5), AnnotationDbi, genefilter,
biomaRt, methods, parallel
S4Vectors, GenomeInfoDb, IRanges, beanplot, RColorBrewer,
nor1mix, siggenes, limma, preprocessCore, illuminaio,
matrixStats, mclust, genefilter, nlme, reshape, MASS, quadprog,
GEOquery
limma, minfi, methylumi, IlluminaHumanMethylation450kmanifest,
statmod, ruv, stringr,
IlluminaHumanMethylation450kanno.ilmn12.hg19, org.Hs.eg.db
methods, graphite, genefilter, BiocGenerics, gplots, GSEABase,
Biobase
Rcpp (>= 0.11.1), BiocGenerics, IRanges (>= 1.20.0),
S4Vectors, tools
httr (>= 0.3), jsonlite (>= 0.9.7), S4Vectors, Hmisc, sqldf,
plyr
Biobase, BiocGenerics (>= 0.13.6), ProtGenerics
boot, e1071, graph, graphics, grDevices, methods, RBGL (>=
1.8.1), RColorBrewer, stats, utils, Rgraphviz, statmod,
plotrix, limma
Rcpp (>= 0.11.0), minet, randomForest, c3net, PCIT, GeneNet,
tools, pracma, corpcor, fdrtool
glasso, mvtnorm, parcor, GeneNet, huge, CompQuadForm, ggm,
mclust, parallel, GSA, limma, multtest, ICSNP, glmnet, network,
ggplot2
dmt, ggplot2, graph, igraph, parallel, plyr, qvalue,
RColorBrewer
methods, BiocGenerics, IRanges, Biobase, GenomicRanges,
Rsamtools, stats, graphics, parallel, S4Vectors
BiocGenerics (>= 0.3.2), Biobase (>= 2.17.8), methods,
graphics, IRanges (>= 2.1.10), GenomicRanges (>= 1.19.6),
Biostrings (>= 2.23.6), affyio (>= 1.23.2), ff, foreach,
BiocInstaller, utils, S4Vectors, RSQLite
affyio (>= 1.35.0), affxparser (>= 1.39.4), DBI (>= 0.3.1),
ff, graphics, methods, preprocessCore (>= 1.29.0), RSQLite (>=
1.0.0), splines, stats, stats4, utils, zlibbioc
Biobase, mclust (>= 4.3), caret, e1071, sampling, class,
kernlab, lattice, nnet, randomForest, proxy, FNN, BiocGenerics,
stats, RColorBrewer, scales, MASS, knitr, mvtnorm, gtools,
plyr, ggplot2, biomaRt
BiocGenerics, Biobase, gplots, igraph, relations, marray
Streamer, DBI, RSQLite (>= 1.0.0), IRanges, reshape2, plyr,
RColorBrewer,ggplot2, Biobase
Rcpp (>= 0.11.1), parallel, stats, graphics, Biobase,
BiocGenerics, Matrix, GenomeInfoDb, IRanges, Biostrings,
BSgenome (>= 1.32.0)
Biostrings (>= 2.32.0), IRanges, S4Vectors, logspline, limma
parallel, methods, stats, GenomicRanges (>= 1.13.3), IRanges,
Biobase, GenomeInfoDb, S4Vectors
Biobase (>= 2.5.5), affy (>= 1.46.0), affyio, oligoClasses
data.table, rBiopaxParser, igraph, STRINGdb, graphics, gplots,
Biobase, BiocGenerics, AnnotationDbi, biomaRt, AnnotationHub,
GenomicRanges
methods, parallel, Matrix (>= 1.0), grid, annotate, graph (>=
1.45.1), Biobase, S4Vectors, BiocParallel, AnnotationDbi,
IRanges, GenomeInfoDb, GenomicRanges, GenomicFeatures, mvtnorm,
qtl, Rgraphviz
Biobase, minfi, doParallel, foreach, iterators, ggplot2,
methods, RColorBrewer
methods, GenomeInfoDb, IRanges, Biostrings, data.table, sqldf,
RColorBrewer
methods, rjson, GetoptLong (>= 0.0.9), RCurl
bumphunter (>= 1.7.6), derfinder (>= 1.1.0), derfinderPlot (>=
1.1.0), devtools (>= 1.6), GenomeInfoDb, GenomicRanges, ggbio
(>= 1.13.13), ggplot2, grid, gridExtra, IRanges, knitcitations
(>= 1.0.1), knitr (>= 1.6), knitrBootstrap (>= 0.9.0), mgcv,
RColorBrewer, rmarkdown (>= 0.3.3), whisker
gplots, biomaRt, org.Hs.eg.db, GO.db, GenomicRanges, hash,
AnnotationDbi
nnet, WGCNA, GSA, biomaRt, GenomicRanges, seq2pathway.data
Biostrings, GenomicRanges, IRanges, KernSmooth, plotrix
methods, IRanges, BSgenome, digest, rtracklayer,
GenomicRanges, Biostrings, shiny (>= 0.11.0), DBI, RSQLite,
plotrix, fields, grid, kohonen, Cairo, parallel, GenomeInfoDb,
class, S4Vectors, ggplot2, reshape2, gridExtra, jsonlite, DT,
RColorBrewer
Rcpp (>= 0.11.2), entropy, scatterplot3d, MASS, TSP, ggplot2,
reshape2, fields, proxy, parallel, Rtsne, fastICA, cluster
IRanges, ggplot2, rtracklayer, GenomicAlignments,
GenomicRanges, GenomeInfoDb, Rsamtools, reshape2, Biostrings,
preprocessCore, chipseq, methods, BiocParallel, S4Vectors
BiocGenerics, GenomicRanges, GenomicAlignments,
VariantAnnotation, rjson, grid, ggplot2, limma, edgeR, DESeq2,
GOstats, GO.db, annotate, pheatmap, BatchJobs
mixtools, stats, parallel, e1071, KernSmooth
Biobase, QDNAseq, ggplot2, grid, stats, utils, methods,
grDevices, GenomicRanges
bit, ffbase, DNAcopy, tilingArray, waveslim, cluster, aCGH,
snapCGH
BiocParallel, GenomicRanges, IRanges, S4Vectors,
SummarizedExperiment, multtest
assertthat, BiocParallel, ChIPseeker, corrplot, data.table,
dplyr, GenomicRanges, GGally, genefilter, gghalves, ggplot2,
ggseqlogo, Gviz, magrittr, org.Hs.eg.db, plyr, reshape2,
rtracklayer, stats, stringr, tibble, tidyr,
TxDb.Hsapiens.UCSC.hg19.knownGene,
TxDb.Hsapiens.UCSC.hg38.knownGene, utils
callr (>= 3.0.0.9001), Matrix, Rcpp, BiocFileCache, DT,
MultiAssayExperiment, circlize, curatedTCGAData, foreach,
glmnet, httr, limma, matrixStats, readr, reshape2, tibble,
rmarkdown, graphics, grid, parallel, stats, knitr, ggplot2,
gridExtra, utils
igraph, Biobase, survival, MASS, stats, RColorBrewer
GenomicRanges, GenomicFeatures, GenomicAlignments, DESeq,
SummarizedExperiment, Rsubread, stats, methods
BiocParallel, ggplot2, grDevices, gridExtra, methods, PepsNMR,
plyr, quadprog, ropls, stats, SummarizedExperiment, TSdist,
utils, Matrix, zoo
gplots, graphics, grDevices, msm, Rlab, stats, sva, utils,
ggplot2, yaml
BiocParallel, GenomicAlignments, GenomicFeatures,
GenomicRanges, IRanges, IVAS, Rsamtools, biomaRt, limma,
S4Vectors, stats, DRaWR, GenomeInfoDb, Gviz, Matrix, dplyr,
fgsea, reshape2, igraph, graphics, e1071, methods, rtracklayer,
scales, grid, ggplot2, mGSZ, utils
GenomicRanges, GenomicFeatures, BiocGenerics, IRanges,
GenomicAlignments, Gviz, S4Vectors, AnnotationDbi, Rsamtools,
BiocStyle
BSgenome, Biostrings, ChIPpeakAnno, IRanges, GenomicRanges,
GenomicAlignments, GenomeInfoDb, GenomicScores, graphics, grid,
limma, Rsamtools (>= 1.31.2), randomForest, rtracklayer, stats,
motifStack, preseqR, utils, KernSmooth, edgeR
data.table, graphics, grDevices, GSEABase, methods, mixtools,
R.utils, shiny, stats, SummarizedExperiment, BiocGenerics,
S4Vectors, utils
methods, BiocGenerics, AnnotationDbi, BSgenome (>= 1.47.3),
VariantAnnotation (>= 1.25.11), Biostrings (>= 2.47.6),
S4Vectors (>= 0.17.25), IRanges (>= 2.13.12), Rsamtools (>=
1.99.3), GenomicFeatures (>= 1.31.3), Gviz, lattice,
latticeExtra, gridExtra, seqinr, GenomeInfoDb, nlme
methods, log4r, tools, rjson, Biobase, graph
ggplot2, ROCR, knitr, qvalue, locfit, methods, stats, utils,
plyr, DESeq2
methods, utils, grDevices, graphics, stats, foreach,
doParallel, BiocGenerics (>= 0.31.6), S4Vectors, GenomeInfoDb,
IRanges, Rsamtools, bamsignals, DNAcopy, ecp, Biostrings,
GenomicAlignments, reshape2, ggdendro, ggrepel, ReorderCluster,
mclust
GenomicFeatures, Rsamtools, rtracklayer, BiocGenerics,
jsonlite, BiocManager, biocViews, AnnotationDbi, Biobase,
Biostrings, DBI, GenomeInfoDb (>= 1.15.4), OrganismDbi,
RSQLite, rBiopaxParser, AnnotationForge, futile.logger (>=
1.3.0), XML, RCurl
utils, methods, grDevices, RSQLite, BiocManager, BiocVersion,
curl, rappdirs, AnnotationDbi (>= 1.31.19), S4Vectors,
interactiveDisplayBase, httr, yaml, dplyr
Biobase, BiocGenerics, Biostrings, DESeq, GenomicRanges,
Hmisc, IRanges (>= 2.13.11), R2HTML, RColorBrewer, Rsamtools,
ShortRead, XML, biomaRt, edgeR, grDevices, graphics, methods,
rJava, stats, svMisc, utils, sendmailR, bitops
methods, foreach, S4Vectors (>= 0.9.25), IRanges (>= 2.13.24),
DNAcopy, oligoClasses (>= 1.21.3)
Biostrings, GenomicRanges, IRanges, graphics, grDevices,
methods, stats, utils
MSnbase, devtools, RColorBrewer, dplyr, rlang, plyr, mzR,
assertthat, scales, methods, entropy, cluster, grDevices,
graphics, stats, utils
Rcpp, doRNG, MASS, data.table, R.utils, doParallel, parallel,
foreach, methods, stats, graphics, ggplot2, DRIMSeq,
BiocParallel
Biobase, BiocGenerics, coda, cowplot, data.table, ggExtra,
ggplot2, graphics, grDevices, KernSmooth, MASS, matrixStats,
methods, Rcpp (>= 0.11.3), S4Vectors, scran, stats, stats4,
SummarizedExperiment, viridis, utils, Matrix
SummarizedExperiment, VariantAnnotation, Rsamtools, grDevices,
GenomicRanges, IRanges, Biostrings
Rcpp (>= 0.12.12), RcppArmadillo, RcppEigen, stats
ggplot2, SingleCellExperiment, data.table, stats, utils,
graphics, compiler
futile.logger, Rdpack, Matrix, data.table (>= 1.11.8), Rcpp,
outliers, abind, stats, graphics, utils, methods
assertthat, methods, MASS, doParallel, parallel, e1071, earth,
foreach, randomForest, stats, IRanges, S4Vectors, data.table,
graphics, truncnorm, mvtnorm, Rcpp (>= 0.12.14), matrixcalc,
magrittr, kernlab, ggplot2, cowplot, BiocStyle
methods, utils, stats, BiocGenerics, S4Vectors, IRanges,
XVector, GenomeInfoDb, GenomicRanges, Biostrings, Rsamtools,
rtracklayer
devtools, stringi, gtools, stats, utils, SummarizedExperiment,
Biostrings, IRanges
gplots, methods, grDevices, stats, SummarizedExperiment
AnnotationDbi, AnnotationFilter, biomaRt, Biostrings,
BSgenome, data.table, dplyr, ensembldb, GenomeInfoDb,
GenomicFeatures, GenomicRanges, magrittr, Matrix, methods,
plyranges, Rcpp, RcppParallel, S4Vectors, stats, stringr,
tibble, tidyr, zeallot
GenomicAlignments, GenomeInfoDb, doParallel, parallel, doBy,
reshape2, scales, coda, foreach, ggplot2, methods, utils,
graphics, stats
VariantAnnotation, Rsamtools, biomaRt, GenomicRanges,
S4Vectors, utils, stats, grDevices, graphics
utils, rmarkdown, knitr, pander, gplots, MCMCpack, shiny, sva,
corpcor, moments, matrixStats, ggvis, d3heatmap, reshape2,
limma, grDevices, graphics, stats, methods, Matrix
data.table, RCurl, digest, methods, stats, utils, dplyr,
graph, Biobase
methods, BiocGenerics, Biobase, S4Vectors, IRanges,
GenomeInfoDb, GenomicRanges, SummarizedExperiment, rtracklayer,
parallel, betareg, lokern, Formula, globaltest
stats, utils, grDevices, lattice, BiocParallel, glmnet, rms,
nsprcomp, ranger, e1071, variancePartition, ggplot2, pROC,
vioplot, CMplot
BiocParallel, RJSONIO, whisker, yaml, pheatmap, ggplot2, plyr,
utils, stats, RColorBrewer, Hmisc, psych, knitr
igraph, cluster, psych, stringr, GenomicRanges
biocViews (>= 1.33.7), BiocManager, stringdist, graph, httr,
tools, optparse, codetools, methods, utils, knitr
methods, stats, utils, dplyr, RSQLite, DBI, rappdirs, curl,
httr
Rcpp, S4Vectors, BiocParallel, stats, methods, Matrix
ComplexHeatmap, S4Vectors, bigrquery, shiny, stats, httr,
rjson, dplyr, magrittr, grid, utils, DT, GenomicRanges,
IRanges, ggplot2, SummarizedExperiment, DBI, GenomicFeatures,
curatedTCGAData, scales, ggpubr, plyr, car, graph, Rgraphviz
stats, utils, futile.logger, parallel, snow
BiocFileCache, BiocManager, biocViews, tibble, methods, rlang,
tidyselect, stringr, rvest, rex, dplyr, xml2, rappdirs, readr,
httr, htmltools, DT, tools, utils, igraph, tidyr, jsonlite, gh,
RBGL, graph, magrittr
methods, tibble, utils, rlang, plyr, rtracklayer,
AnnotationDbi, KEGGREST
BiocGenerics, S4Vectors, Matrix, methods, utils, DelayedArray,
BiocParallel, irlba, rsvd, Rcpp
bookdown, knitr (>= 1.12), rmarkdown (>= 1.2), stats, utils,
yaml, BiocManager
BiocStyle, bookdown, git2r, httr, knitr, rmarkdown,
rstudioapi, stringr, tools, utils, usethis
beeswarm, Biobase, DESeq2, devtools, dplyr, ggdendro, ggplot2,
glmnet, graphics, grDevices, grid, gtable, ipflasso, methods,
RColorBrewer, reshape2, scales, stats, SummarizedExperiment,
survival, tibble
BiocGenerics (>= 0.31.6), BiocStyle, Biobase, ggplot2,
WriteXLS, gtools, RColorBrewer, limma, grid, gtable, gridExtra,
biovizBase, e1071, methods, grDevices, stats, utils
beanplot, BiocGenerics, BiocParallel, BSgenome, data.table,
DelayedArray, formula.tools, GenomeInfoDb, GenomicAlignments,
GenomicRanges (>= 1.37.16), ggplot2 (>= 2.2.0), gtools, IRanges
(>= 2.18.0), KernSmooth, memoise, plyr, Rsamtools, reshape,
rtracklayer, S4Vectors, som, stringdist, stringi,
SummarizedExperiment, utils, vegan, VGAM
methods, rJava, BiocParallel, stats, Biobase,
SummarizedExperiment, corpcor, geometry, NMF, nnls, DMwR,
pcaPP, apcluster, graphics
Biobase, circlize, ComplexHeatmap, ConsensusClusterPlus,
cowplot, data.table, dplyr, drc, DT, flowCore, FlowSOM,
ggplot2, ggrepel, ggridges, graphics, grDevices, grid,
gridExtra, htmltools, limma, magrittr, Matrix, matrixStats,
methods, nnls, plotly, purrr, RColorBrewer, reshape2, Rtsne,
SingleCellExperiment, SummarizedExperiment, S4Vectors, scales,
scater, shiny, shinydashboard, shinyBS, shinyjs, stats, utils
methods, scales, dplyr, data.table (>= 1.9.4), WGCNA, grid,
ggplot2, ggpmisc, ggthemes, ggrepel, sna, clusterProfiler,
fgsea, stringr, knitr, rmarkdown, igraph, DT, htmltools,
pracma, intergraph, grDevices, utils, network, matrixStats,
ggdendro, gridExtra, gtable
SummarizedExperiment, FactoMineR, factoextra, IRanges,
graphics, modes, parallel, plyr, cluster, diptest, stats,
matrixStats
gplots, shiny, plotly, pheatmap, bioDist, dendextend, cowplot,
corrplot, grDevices, stats, graphics, reshape2, S4Vectors,
SummarizedExperiment
XML, RCurl, RBGL, parallel, foreach, doParallel, openxlsx,
igraph, circlize, graph, stats, utils, grDevices, graphics,
methods, biomaRt
bitops,gplots,grDevices,som,
dplyr,gridExtra,png,stringr,S4Vectors, IRanges,
GenomeInfoDb,graphics, stats, utils
S4Vectors, grDevices, stats, utils, NOISeq, IRanges,
Rsamtools, exomeCopy, foreach, ggplot2, plyr, GenomeInfoDb,
gplots, reshape2, stringr, testthat, graphics, methods, shiny,
shinyFiles, shinyjs, grid, openxlsx
BiocParallel, GDSArray, GenomeInfoDb, IRanges, S4Vectors,
SNPRelate, SummarizedExperiment, data.table, edgeR, gdsfmt,
grDevices, lattice, limma, methods, plyr, qqman, rappdirs,
reshape2, stats, utils
IRanges, GenomicRanges, SummarizedExperiment, pracma,
regioneR, assertthat, karyoploteR, CopyNumberPlots, graphics,
utils, VariantAnnotation, Rsamtools, GenomeInfoDb, Biostrings,
methods
BiocGenerics, S4Vectors, IRanges, data.table, ggplot2,
Biobase, stats, methods, ComplexHeatmap, MIRA, tidyr, grid,
grDevices, simpleCache, fitdistrplus
methods, Rcpp, data.table, RColorBrewer, scales, grid, plyr,
knitr, abind, clue, grDevices, utils, pdist, magrittr,
reshape2, dplyr, tidyr, rlang, BiocStyle, rmarkdown
parallel, data.table, seqinr, S4Vectors (>= 0.9.25), IRanges,
BSgenome, BiocParallel, hash
RCurl, stringr, S4Vectors, stringdist, ggplot2, igraph, utils,
grid, gridExtra, methods, stats, BiocFileCache, rappdirs
shiny, ConsensusClusterPlus, RColorBrewer, gplots, jsonlite,
ape, WGCNA, RTCGAToolbox
SNFtool, iCluster, cluster, impute, limma,
ConsensusClusterPlus, grDevices, survival
Biobase, dplyr, irlba, lattice, Matrix, matter, magrittr,
mclust, nlme, parallel, signal, sp, stats4, utils, viridisLite
utils, stats, graph, RBGL, GSEABase, genefilter, annotate, DBI
BiocFileCache, BiocParallel, dplyr, rlang, glue, memoise,
purrr (>= 0.3.0), rappdirs, tidyr, lubridate
BiocNeighbors, ggplot2, scater, viridis, cowplot,
SummarizedExperiment, SingleCellExperiment, tidyr, magrittr,
dplyr, ggridges, stats, purrr, listarrays, methods,
BiocParallel, BiocGenerics
BiocGenerics, Biobase, cba, dendextend, dtw, EnvStats,
ggplot2, ggrepel, grDevices, igraph, maptree, methods, mgcv,
reshape2, Rtsne, stats, splines, SummarizedExperiment, utils
Rsamtools, GenomeInfoDb, GenomicRanges, rtracklayer, idr,
RColorBrewer, genomation
prettydoc,Hmisc,globaltest,sva,illuminaio,rmarkdown,IlluminaHumanMethylation450kmanifest,IlluminaHumanMethylationEPICanno.ilm10b2.hg19,
limma,RPMM, DNAcopy, preprocessCore,impute, marray, wateRmelon,
plyr,goseq,missMethyl,kpmt,ggplot2,
GenomicRanges,qvalue,isva,doParallel,bumphunter,quadprog,shiny,shinythemes,plotly
(>= 4.5.6),RColorBrewer,dendextend, matrixStats,combinat
ChIC.data (>= 1.3.3), caTools, methods,GenomicRanges, IRanges,
parallel, progress, caret, grDevices, stats, utils, graphics,
S4Vectors, BiocGenerics
BiocGenerics (>= 0.11.3), S4Vectors (>= 0.1.0), IRanges (>=
1.99.17), Rsamtools (>= 1.17.28), GenomicAlignments (>=
1.1.16), chipseq (>= 1.12.0), gtools, BiocParallel, methods,
reshape2, Nozzle.R1, Biobase, grDevices, stats, utils,
GenomicFeatures, TxDb.Hsapiens.UCSC.hg19.knownGene,
TxDb.Hsapiens.UCSC.hg18.knownGene,
TxDb.Mmusculus.UCSC.mm10.knownGene,
TxDb.Mmusculus.UCSC.mm9.knownGene,
TxDb.Rnorvegicus.UCSC.rn4.ensGene,
TxDb.Celegans.UCSC.ce6.ensGene,
TxDb.Dmelanogaster.UCSC.dm3.ensGene
tools, stringr, Rsamtools, GenomicRanges, IRanges, seqplots,
ggplot2, LSD, corrplot, methods, stats, grDevices, graphics,
utils, BiocGenerics, S4Vectors
methods, utils, GenomeInfoDb, stats, BiocParallel,
GenomicRanges (>= 1.14.4), ggplot2 (>= 1.0), data.table (>=
1.9.6), Rsamtools (>= 1.16.1), IRanges (>= 1.6), S4Vectors (>=
0.8), biovizBase (>= 1.18), broom (>= 0.4), RColorBrewer (>=
1.1), dplyr (>= 0.5), scales (>= 0.4.0), viridis (>= 0.3),
hexbin (>= 1.27), rmarkdown
BiocGenerics (>= 0.1.0), GO.db, biomaRt, BSgenome,
GenomicFeatures, GenomeInfoDb, matrixStats, AnnotationDbi,
limma, multtest, RBGL, graph, BiocManager, stats, regioneR,
DBI, ensembldb, Biobase, seqinr, idr, GenomicAlignments,
DelayedArray, SummarizedExperiment, rtracklayer, Rsamtools
AnnotationDbi, BiocGenerics, boot, enrichplot, IRanges,
GenomeInfoDb, GenomicRanges, GenomicFeatures, ggplot2, gplots,
graphics, grDevices, gtools, methods, plotrix, dplyr, parallel,
magrittr, RColorBrewer, rtracklayer, S4Vectors, stats,
TxDb.Hsapiens.UCSC.hg19.knownGene, utils
Biostrings, fBasics, GenomicRanges, IRanges (>= 2.5.14),
graphics, grDevices, HilbertVis, ShortRead, stats, timsac,
utils
rjson, graphics, stats, RCurl, DBI, digest, BiocGenerics, Rcpp
(>= 0.11.0), ggplot2,grid,gridExtra, png,base64enc,DT,rsvg
matrixStats, MASS, Hmisc, Delaporte, methods, grDevices,
graphics, stats, utils
Biobase (>= 2.17.8), graphics, grDevices, methods, stats,
IRanges, rtracklayer, GenomicRanges
mzR, S4Vectors, dbscan, RColorBrewer, ape, network, GGally,
ggplot2, plotly, methods, utils, stats, sna, grDevices,
graphics, Biobase, gplots, MSnbase
methods, pracma, princurve (>= 2.0.5), scatterplot3d,
RColorBrewer, grDevices, graphics, utils, stats
BiocParallel, cluster, methods, gplots, graphics, grDevices,
RColorBrewer, Rcpp, S4Vectors, SingleCellExperiment, stats,
SummarizedExperiment, tools, utils, rhdf5
circlize (>= 0.4.5), GetoptLong, colorspace, clue,
RColorBrewer, GlobalOptions (>= 0.1.0), parallel, png
regioneR, IRanges, Rsamtools, SummarizedExperiment,
VariantAnnotation, methods, stats, GenomeInfoDb, GenomicRanges,
cn.mops, rhdf5, utils
SQUAREM, slam, maptpx, plyr(>= 1.7.1), cowplot, gtools,
flexmix, picante, limma, parallel, reshape2, stats, utils,
graphics, grDevices
S4Vectors (>= 0.7.21), IRanges(>= 2.3.23), GenomicRanges,
GenomicAlignments, parallel, tools
AnnotationDbi, BiocParallel, Biostrings, methods,
GenomeInfoDb, GenomicAlignments, GenomicRanges, grDevices,
grid, gridExtra, IRanges, reshape2, Rsamtools, S4Vectors (>=
0.9.38), utils
data.table, methods, MergeMaid, ConsensusClusterPlus, limma,
cluster, dplyr, Biobase, grDevices, stats, graphics, utils
doParallel, dplyr, glmnet, rpart, rpart.plot, stats,
flowCore,grDevices, graphics, utils
flowCore (>= 1.43.10), flowWorkspace (>= 3.33.10), openCyto
(>= 1.11.3), XML, data.table, jsonlite, RBGL, ncdfFlow,
Rgraphviz, Biobase, methods, graph, graphics, utils, base64enc,
plyr, dplyr, grDevices, ggcyto (>= 1.11.4), yaml,
lattice, stats, corpcor, RUnit
MSnbase, RColorBrewer,stats,preprocessCore,Cairo,png,
lattice,reshape2,gplots,pcaMethods,ggplot2,
limma,knitr,tmvtnorm,norm,impute, stringr, grDevices, graphics,
openxlsx, utils, cp4p (>= 0.3.5), scales, Matrix, vioplot,
imp4p (>= 0.8), highcharter (>= 0.7.0), DAPARdata (>= 1.16.0),
siggenes, graph, lme4, readxl, clusterProfiler, dplyr,
tidyr,AnnotationDbi, vsn, FactoMineR, factoextra, visNetwork
methods, stats, utils, ggplot2, fdrtool, reshape2,
GenomicRanges, SummarizedExperiment, smoothmest, plyr, tidyr,
assertthat, S4Vectors, purrr, soGGi, ChIPpeakAnno
Rcpp (>= 0.12.7), DESeq2, edgeR, SummarizedExperiment,
ComplexHeatmap, grid, parallel, BiocParallel, grDevices,
graphics, stats, methods, utils
checkmate, data.table, DESeq2, edgeR (>= 3.13.4),
GenomicRanges, methods, S4Vectors, stats, SummarizedExperiment
utils, methods, Biobase, BiocGenerics, broom, circlize,
ComplexHeatmap, cowplot, ConsensusClusterPlus, cluster, DESeq2,
dplyr, edgeR, ggplot2, ggdendro, grid, ggrepel, grDevices,
knitr, logging, lasso2, magrittr, Nozzle.R1, psych,
RColorBrewer, reshape, rlang, scales, stats, stringr,
S4Vectors, SummarizedExperiment, tidyr, tibble
ggplot2, dplyr, purrr, readr, tibble, tidyr,
SummarizedExperiment (>= 1.11.5), MSnbase, limma, vsn, fdrtool,
ggrepel, ComplexHeatmap, RColorBrewer, circlize, shiny,
shinydashboard, DT, rmarkdown, assertthat, gridExtra, grid,
stats, imputeLCMD, cluster
BiocParallel, BiocGenerics, ChIPpeakAnno, data.table,
DelayedArray, GenomeInfoDb, GenomicAlignments, glue, IRanges,
plyr, Rcpp (>= 0.12.13), rtracklayer, S4Vectors (>= 0.23.19),
SummarizedExperiment, tools, utils
BiocGenerics (>= 0.7.5), Biobase, BiocParallel, genefilter,
methods, stats4, locfit, geneplotter, ggplot2, Hmisc, Rcpp (>=
0.11.0)
BiocGenerics, data.table(>= 1.11.8), GenomeInfoDb,
GenomicRanges, methods, S4Vectors, SummarizedExperiment, stats,
utils
BiocGenerics, biomaRt, hwriter, methods, stringr, Rsamtools,
statmod, geneplotter, genefilter
graph, igraph, RBGL, circlize, limma, edgeR, EBSeq, NBPSeq,
DESeq, stats, grDevices, graphics, pheatmap, utils, ggplot2,
Matrix, jsonlite, tools, DESeq2, methods
utils, stats, speedglm, MASS, data.table, splines, arm,
rtracklayer, benchmarkme, tibble, matrixStats, fastDummies,
graphics
utils, stats, grDevices, rtracklayer, multcomp, calibrate,
graphics
Matrix, MASS, RcppRoll,GenomicRanges, IRanges, GenomeInfoDb,
methods, mvtnorm, stats, parallel
parallel, Rcpp, RcppRoll, betareg, grDevices, graphics,
methods, stats, utils
ExperimentHub, bsseq, GenomeInfoDb, limma, edgeR, DSS,
missMethyl, GenomicRanges, methods, graphics, plyr, Gviz,
IRanges, stats, utils, S4Vectors
GenomicFeatures, Gviz, readxl, plyr, rtracklayer,
IlluminaHumanMethylation450kanno.ilmn12.hg19,
IlluminaHumanMethylationEPICanno.ilm10b4.hg19
dplyr, tidyr, numbers, purrr, stringr, DNABarcodes, stats,
utils, methods
AnnotationDbi, BiocParallel, DO.db, fgsea, ggplot2, GOSemSim
(>= 2.0.0), methods, qvalue, reshape2, S4Vectors, stats, utils
utils, stats, MASS, GenomicRanges, IRanges, S4Vectors,
BiocGenerics, methods, BiocParallel, limma, edgeR, ggplot2,
reshape2
DESeq2, limma, EDASeq, RColorBrewer, sva, Hmisc, pheatmap,
FactoMineR, corrplot, randomForest, e1071, caret, MASS,
lubridate, plsVarSel, kknn, FSelector, methods, stats, utils,
graphics, grDevices, reshape2, ineq, arm, pls, RSNNS, edgeR
matrixStats, stats, truncdist, base64enc, ggplot2
GenomicRanges, data.table, stringr, diffr, dplyr, methods,
rjson, utils, R.utils, foreach, withr, rtracklayer,
GenomeInfoDb, settings, filehash
methods, matrixStats (>= 0.55.0), Matrix, S4Vectors (>=
0.17.5), IRanges, HDF5Array (>= 1.7.10), BiocParallel
RColorBrewer, amap, edgeR, gplots, grDevices, limma,
GenomicAlignments, locfit, stats, utils, IRanges, lattice,
systemPipeR, tools, Rcpp, dplyr, ggplot2, BiocParallel,
parallel, S4Vectors, Rsamtools (>= 1.99.1), DESeq2, methods,
graphics, ggrepel
matrixTests, matrixStats, MetaCycle (>= 1.2.0), data.table,
ggplot2, ggExtra, dplyr, broom, shiny, shinyBS,
shinycssloaders, shinydashboard, shinyjs, BiocStyle, rmarkdown,
knitr, kableExtra, magick, VennDiagram, UpSetR, heatmaply,
viridis, plotly, DT, gridExtra, methods, stats,
SummarizedExperiment, BiocGenerics, S4Vectors, zip, reshape2
biomaRt, data.table, utils, stats, Biostrings,
SummarizedExperiment, VariantAnnotation, AnnotationDbi,
GenomeInfoDb, IRanges, GenomicRanges, methods
methods, drc, stats, httr, jsonlite, reshape2 , vsn, affy,
limma, stringr, ggplot2, graphics, grDevices, calibrate,
corrgram, gridExtra, DT, shiny, shinydashboard, readxl,
d3heatmap, prodlim, matrixStats
S4Vectors, BiocParallel, Rcpp, Matrix, methods, utils, stats,
edgeR, rhdf5, HDF5Array, R.utils, dqrng
ExperimentHub, utils, magrittr, dplyr, tidyr, mclust, ggplot2,
purrr, reshape2, viridis, ggthemes, stats, methods
BiocGenerics (>= 0.7.1), graphics, grDevices, stats, abind,
tiff, jpeg, png, locfit, fftwtools (>= 0.9-7), utils,
htmltools, htmlwidgets, RCurl
methods, graphics, BiocGenerics, IRanges (>= 1.13.9), DESeq,
aroma.light, Rsamtools (>= 1.5.75), biomaRt, Biostrings,
AnnotationDbi, GenomicFeatures, GenomicRanges, BiocManager
gplots, Biobase, GEOquery, limma, arrayQualityMetrics, impute,
RColorBrewer, zoo, igraph, plyr, Matrix, MASS, RCurl, affy
PADOG (>= 1.6.0), GSVA (>= 1.12.0), globaltest (>= 5.18.0),
limma (>= 3.20.9), edgeR (>= 3.6.8), HTMLUtils (>= 0.1.5),
hwriter (>= 1.2.2), gplots (>= 2.14.2), ggplot2 (>= 1.0.0),
safe (>= 3.4.0), stringi (>= 0.5.0), parallel, stats, metap,
grDevices, graphics, utils, org.Hs.eg.db, org.Mm.eg.db,
org.Rn.eg.db, RColorBrewer, methods, EGSEAdata (>= 1.3.1),
Glimma (>= 1.4.0), htmlwidgets, plotly, DT
GenomicRanges, ggplot2, reshape, grid, grDevices, graphics,
methods, parallel, stats, utils, IRanges, GenomeInfoDb,
S4Vectors, GenomicFeatures, TCGAbiolinks (>= 2.9.2), plyr,
Matrix, dplyr, Gviz, ComplexHeatmap, circlize,
MultiAssayExperiment, SummarizedExperiment, biomaRt,
doParallel, downloader, ggrepel, lattice, magrittr, readr,
scales, rvest, xml2, plotly, gridExtra, rmarkdown, stringr,
tibble, tidyr, progress, purrr, ggpubr, rtracklayer,
DelayedArray
emdist, BiocParallel, matrixStats, ggplot2, CDFt,
preprocessCore
tools, jsonlite, RCurl, tidyr, data.table, methods
methods, tools, jsonlite, RCurl, tidyr, data.table, dplyr,
stringr, stringi, utils, AnnotationHub, GenomicRanges,
rtracklayer, S4Vectors, GenomeInfoDb
matrixStats, stats, GetoptLong, Rcpp, utils, locfit, circlize
(>= 0.4.5), IRanges
AnnotationDbi, BiocFileCache, BiocManager, ComplexHeatmap,
GSEABase, GO.db, KEGGREST, KEGGgraph, Rgraphviz, S4Vectors,
SPIA, biocGraph, edgeR, geneplotter, graphite, hwriter, limma,
methods, pathview, rappdirs, safe, topGO
MASS, e1071, quadprog, parallel, stats, matrixStats, stringr,
locfdr
GenomicFeatures, stringr, GenomeInfoDb, igraph, MASS, nnls,
limma, matrixStats, RBGL, prodlim, graph, methods, utils,
stats, doParallel, foreach, affxparser, GenomicRanges,
S4Vectors, IRanges, qvalue, cobs, rhdf5, BSgenome,
BSgenome.Hsapiens.UCSC.hg38, Biostrings
stats, methods, grDevices, graphics, utils
methods, ExperimentHub, BiocManager, DBI, BiocCheck, httr,
curl, biocViews, graph
utils, S4Vectors, BiocManager, curl, rappdirs
ggplot2, gridExtra, pbapply, parallel, SummarizedExperiment,
stats, mclust
methods, igraph, Matrix, KEGGREST, plyr, stats, graphics,
utils
gap (>= 1.1-17), Matrix, BiocGenerics, utils, survey
methods, shiny, stats, IRanges, Biostrings, ShortRead, DT,
methods, S4Vectors, graphics, htmltools, shinyBS, Rcpp (>=
0.12.12)
methods, BiocGenerics, Biobase, tools, dplyr, IRanges,
Biostrings, S4Vectors, kebabs, igraph, Matrix, digest,
filehash, Rcpp, ggplot2, gtable, grid, reshape2, ggdendro,
BiocParallel, utils, stats
data.table, fdrtool, grDevices, graphics, Rcpp, stats, utils
stats, utils, flowCore, ConsensusClusterPlus, BiocGenerics,
tsne, flowWorkspace, CytoML, XML, RColorBrewer
DESeq2, Biobase, Biostrings, GenomicRanges,
SummarizedExperiment, Rsamtools, ggbio, reshape2, rtracklayer,
fda, GenomicAlignments, gtools, Matrix
shiny, fda, doParallel, GenomicAlignments, Rcpp, methods,
foreach, parallel, GenomeInfoDb, Rsamtools, grDevices,
graphics, stats, RColorBrewer
methods, BiocGenerics, Biobase, S4Vectors, IRanges,
GenomicRanges, Rsamtools (>= 1.6.1), rtracklayer (>= 1.14.1),
ChIPpeakAnno (>= 2.2.0), VariantAnnotation, plyr, snpStats,
ggplot2 (>= 0.9.0), reshape (>= 0.8.4), scales
BiocGenerics, Biostrings, dplyr, GenomeInfoDb, GenomicRanges,
httr, IRanges, jsonlite, methods, VariantAnnotation
AnnotationDbi, BiocGenerics, dplyr, DT, GenomeInfoDb,
openxlsx, GenomicFeatures, methods, purrr, S4Vectors, shiny,
shinyjs, tidyr, shinythemes
stats, utils, methods, Matrix, fastmatch, plyr, dplyr,
magrittr, data.table, igraph, graph, RBGL, GO.db, org.Hs.eg.db,
org.Mm.eg.db, GOSemSim, GEOquery, AnnotationDbi, Biobase,
BiocFileCache, matrixStats
DaMiRseq, MLSeq, stats, methods, SummarizedExperiment
BiocManager, Biobase, utils, methods, RSQLite,
AnnotationForge, devtools, dplR, stringr, graphics, stats,
affxparser, data.table
shiny, jsonlite, rjson, XML, limma, edgeR, DESeq2,
clusterProfiler, DOSE, org.Hs.eg.db, biomaRt, survival,
survminer, pathview, ggplot2, gplots, DT, GenomicDataCommons,
BiocParallel
tools, S4Vectors (>= 0.17.34), SNPRelate, SeqArray
tcltk, ggplot2, methods, stats, grDevices, graphics, utils
Biobase, BiocGenerics, GWASTools, gdsfmt, GenomicRanges,
IRanges, S4Vectors, SeqArray, SeqVarTools, SNPRelate,
data.table, dplyr, foreach, graphics, grDevices, igraph,
Matrix, methods, reshape2, stats, utils
httr, readr (>= 1.3.1), xml2, dplyr, tidyr, magrittr, limma
limma, genefilter, Biobase, BiocGenerics, S4Vectors, IRanges,
Matrix, AnnotationDbi, digest, GenomicRanges,
SummarizedExperiment
methods, utils, stats, BiocGenerics (>= 0.25.1), snpStats, ff,
Rsamtools, AnnotationDbi, Biobase, bit, VariantAnnotation,
hexbin, rtracklayer, Gviz, stats4, S4Vectors (>= 0.9.25),
IRanges, GenomeInfoDb, GenomicRanges (>= 1.29.6), iterators,
Biostrings, ROCR, biglm, ggplot2, reshape2
Biobase, changepoint, data.table, genefilter, graphics,
GSEABase, HH, lattice, latticeExtra, plyr, scatterplot3d, stats
methods, Biobase, graph, Rgraphviz, GO.db, AnnotationDbi, DBI,
SparseM
BiocGenerics, S4Vectors (>= 0.9.38), IRanges, Rsamtools,
ShortRead, rtracklayer, ggplot2, BiocManager, grDevices, utils,
stats, GenomeInfoDb
Rcpp (>= 0.11.5), mapplots (>= 1.5), gtools (>= 3.5.0),
GenomicRanges (>= 1.28.4), IRanges, AnnotationDbi, utils,
grDevices, graphics, stats,
AnnotationDbi, dendextend, doParallel, foreach, parallel,
org.Hs.eg.db, GO.db, Rcpp, stats, graphics,
MultiAssayExperiment, IRanges, S4Vectors
methods, stats, stats4, AnnotationDbi (>= 0.0.89), GO.db (>=
1.13.0), RBGL, annotate (>= 1.13.2), AnnotationForge, Rgraphviz
plyr, grid, gProfileR, reshape2, limma, ggplot2, gtable
AnnotationDbi, AnnotationHub, BiocFileCache, BiocParallel,
edgeR, EnrichmentBrowser, ExperimentHub, grDevices, graphics,
KEGGandMetacoreDzPathwaysGEO, KEGGdzPathwaysGEO, methods,
rappdirs, S4Vectors, stats, utils
methods, BiocGenerics, Biobase, GSEABase (>= 1.17.4),
geneplotter, shiny, shinythemes
BiocParallel, Biostrings, CRISPRseek, ChIPpeakAnno,
data.table, matrixStats, BSgenome, parallel, IRanges (>=
2.5.5), S4Vectors (>= 0.9.6), GenomicAlignments (>= 1.7.3),
GenomeInfoDb, Rsamtools, hash, limma
graphics, stats, utils, methods, gdsfmt, DBI, RSQLite,
GWASExactHW, DNAcopy, survival, sandwich, lmtest, logistf,
quantsmooth
splancs, mvoutlier, methods, stats, diptest, flowCore, flowFP
AnnotationDbi, biomaRt, BiocGenerics, Biostrings, DBI, FField,
GenomicFeatures, GenomicRanges (>= 1.25.4), ggplot2 (>= 2.1.0),
grid, gridExtra (>= 2.0.0), gtable, gtools, IRanges (>= 2.7.5),
plyr (>= 1.8.3), reshape2, Rsamtools, scales, stats, utils,
viridis, data.table, BSgenome, grDevices, GenomeInfoDb,
VariantAnnotation
biomaRt, caTools, dplyr, ggplot2, graphics, grDevices, gtools,
ggpubr, magrittr, maxLik, RColorBrewer, reshape2, stats,
tibble, utils
snpStats, mvtnorm, GGtools, Rsamtools, igraph, kernlab,
FactoMineR, plspm, IRanges, GenomicRanges,
data.table,grDevices, graphics,stats, utils, methods
plyr, graph, htmlwidgets, Rgraphviz, rjson, XML, methods,
grDevices, stats, graphics
S4Vectors (>= 0.9.25), Biobase (>= 2.5.5), affxparser,
RColorBrewer, Biostrings
stats, stats4, utils, RCurl, GenomeInfoDbData
methods, utils, stats, BiocGenerics, S4Vectors, IRanges,
GenomicRanges, Biostrings, Rsamtools, BiocParallel
stats, httr, xml2, jsonlite, utils, rlang, readr,
GenomicRanges, IRanges, dplyr, rappdirs, SummarizedExperiment,
S4Vectors, tibble
methods, utils, stats, tools, DBI, RSQLite (>= 2.0), RCurl,
XVector (>= 0.19.7), Biostrings (>= 2.47.6), rtracklayer (>=
1.39.7), biomaRt (>= 2.17.1), Biobase (>= 2.15.1)
GenomicAlignments (>= 1.7.7), IRanges, S4Vectors (>= 0.9.25),
VariantAnnotation (>= 1.27.9), GenomeInfoDb
Rsamtools, rtracklayer, GenomicRanges (>= 1.29.6), IRanges,
BiocGenerics (>= 0.15.3), data.table, stringr, GenomeInfoDb,
ggplot2, grid, gridExtra, methods, igraph, S4Vectors (>=
0.13.13), dplyr, Gviz, Biobase, graphics, stats, utils,
grDevices
grDevices, stats, utils, plyr, gridExtra, sjstats, parallel,
ggbio, S4Vectors, IRanges, GenomeInfoDb, Rdpack
utils, XML, Biobase, IRanges (>= 2.3.23), Biostrings,
BSgenome, GenomeInfoDb, AnnotationHub
GenomicFeatures, GenomeInfoDb, rtracklayer, bumphunter,
derfinder, AnnotationDbi, IRanges, org.Hs.eg.db, utils, methods
methods, BiocGenerics (>= 0.21.2), Rcpp (>= 0.11.2), IRanges
(>= 2.19.13), data.table, stats4
DBI, RMySQL, RSQLite, numDeriv, RColorBrewer, parallel, stats,
methods, graphics, grDevices, xtable, tools, brew, stringr,
RJSONIO, ggplot2, ggrepel, tidyr, utils, RCurl, XML
edgeR, grDevices, jsonlite, methods, stats, S4Vectors, utils
annotate, AnnotationDbi, Biobase, dendextend, GSEABase, VGAM
AnnotationDbi, ape, bnlearn, Category, DT, gRbase, GSEABase,
gRain, GOstats, org.Hs.eg.db, org.Mm.eg.db, reshape2, shiny,
WGCNA, data.table, grDevices, graphics, stats, utils
GenomicAlignments, BSgenome, Rsamtools, rtracklayer, MASS,
parallel, GenomeInfoDb, SummarizedExperiment, stats, utils
GenomicFeatures, rtracklayer,AnnotationDbi, GenomicRanges,
magrittr, ggplot2, methods, stats,utils,dplyr
BiocFileCache, S4Vectors, curl, googleAuthR, httr, jsonlite,
methods, plyr, readr, rlang, stringr, tibble, tidygraph, tidyr,
utils
S4Vectors, vctrs, curl, httr, jsonlite, methods, plyr, rlang,
tibble, tidygraph, utils
utils, tools, Matrix, BiocGenerics (>= 0.32.0), S4Vectors,
IRanges
AnnotationHub, assertthat, dplyr, ExperimentHub, kableExtra,
knitr, magrittr, methods, readr, S4Vectors, tibble, utils
AnnotationHub, assertthat, dplyr, ExperimentHub, kableExtra,
knitr, magrittr, methods, readr, S4Vectors,
SummarizedExperiment, phyloseq, MultiAssayExperiment,
data.table
dplyr, openxlsx, ggplot2, tibble, xml2, stats, utils,
gridExtra
edgeR (>= 3.9.14), DESeq2 (>= 1.10.1), DESeq (>= 1.22.1),
BiocParallel (>= 1.4.3), Biobase, utils, stats, grDevices,
graphics, methods
BiocGenerics (>= 0.2.0), S4Vectors (>= 0.9.25), IRanges (>=
1.21.39), GenomicRanges (>= 1.23.21), Rsamtools (>= 1.8.5),
Biostrings (>= 2.24.1), chipseq (>= 1.6.1), hwriter (>= 1.3.0),
Cairo (>= 1.5.5), GenomicFeatures (>= 1.9.31), BiocParallel,
parallel, tools, rtracklayer (>= 1.17.19), GenomicAlignments,
VariantTools (>= 1.7.7), GenomeInfoDb, SummarizedExperiment,
methods
ggplot2, viridis, RColorBrewer, scales, reshape2, stringr,
data.table, GenomeInfoDb, GenomicRanges, stats, IRanges,
grDevices, S4Vectors, digest, tibble, jsonlite, BiocParallel,
R.utils, readr, methods
data.table, ggplot2, gridExtra, mgcv, stats, InteractionSet,
GenomicRanges, IRanges, S4Vectors, BiocParallel, QDNAseq,
KernSmooth, methods, utils, graphics, pheatmap, gtools, rhdf5
R2jags, abind, cowplot, grid, forcats, stringr, GenomicRanges,
S4Vectors, XVector, Biostrings, GenomicFeatures,
BSgenome.Hsapiens.UCSC.hg19, BiocGenerics, tidyr, grDevices,
stats, TxDb.Hsapiens.UCSC.hg19.knownGene, utils, methods, Rcpp
Biostrings, graphics, grDevices, rtracklayer, RColorBrewer,
Matrix, parallel, GenomeInfoDb
methods, utils, HilbertVis, png, grDevices, circlize (>=
0.3.3), IRanges, GenomicRanges, polylabelr
shiny, ssrch, S4Vectors, SummarizedExperiment, utils
methods, slam, lpsymphony, fdrtool, BiocGenerics
Rcpp, stats, splines, methods, utils, DESeq2,
SummarizedExperiment, fdrtool, genefilter, qvalue, Biobase,
BiocGenerics, BiocParallel, dplyr, grid, ggplot2, cowplot
doParallel, lme4, BiocGenerics, GenomicRanges, IRanges,
foreach, AnnotationDbi, S4Vectors, GenomeInfoDb, stats,
ggfortify, grDevices, methods, Matrix, utils, graphics,
gridExtra, grid, lattice, Rsamtools, survival, BiocParallel,
GenomicAlignments, parallel
STRINGdb, Biostrings, igraph, graphics, utils, seqinr
pROC, deSolve, rootSolve, KernSmooth, gdata, GenomicFeatures,
GenomicRanges, IRanges, BiocGenerics, GenomicAlignments,
Rsamtools, S4Vectors, GenomeInfoDb, DESeq2, plgem,
SummarizedExperiment, TxDb.Mmusculus.UCSC.mm9.knownGene, shiny
rhdf5, dplyr, magrittr, tidyr, ShortRead, Biostrings, ggplot2,
methods, BiocGenerics, XVector, tibble, stats, BiocParallel,
bit64, stringr, utils
doParallel, lme4, BiocGenerics, GenomicRanges, IRanges,
foreach, AnnotationDbi, S4Vectors, GenomeInfoDb, ggfortify,
grDevices, methods, Matrix, BiocParallel,utils, stats
biomaRt, ENVISIONQuery, AffyCompatible, R.methodsS3, utils
d3heatmap, shinyBS, shinyFiles, shinythemes, ggplot2
utils, R6, data.table, curl, httr, Rlabkey (>= 2.3.1),
Biobase, pheatmap, ggplot2 (>= 3.2.0), scales, stats, gplots,
plotly, heatmaply (>= 0.7.0), jsonlite, rmarkdown,
preprocessCore, flowCore, flowWorkspace, digest
Biobase, BiocParallel, ComplexHeatmap, circlize, compiler,
cowplot, DESeq2, ggplot2, grDevices, knitr, Matrix, methods,
S4Vectors, stats, SummarizedExperiment, utils
AnnotationDbi, BSgenome, cleanUpdTSeq, Gviz, seqinr,
preprocessCore, IRanges, GenomeInfoDb, depmixS4, limma,
BiocParallel
seqLogo, Biostrings, GenomicFeatures, IRanges, seqinr,
graphics, grDevices, stats, utils, grid, methods, DBI, RMySQL,
GenomicAlignments, BiocParallel, BiocGenerics, DEXSeq, DESeq2
Biostrings, RCurl, XML, xml2, RJSONIO, sqldf, igraph, httr,
S4Vectors, IRanges, GenomicRanges, SummarizedExperiment,
methods
IRanges, S4Vectors, GenomeInfoDb, BiocGenerics, methods,
Matrix, Rcpp
igraph (>= 1.0.1), FGNet (>= 3.0.7), knitr (>= 1.12.3), stats,
utils, grDevices, graphics
IsoCorrectoR, readxl, tcltk2, tcltk, utils
dplyr, magrittr, methods, quadprog, readr, readxl, stringr,
tibble, tools, utils, pracma, WriteXLS
methods, BSgenome, plyr, reshape2, gridExtra, Biostrings (>=
2.50.0), IRanges, GenomicRanges, DRIMSeq, RColorBrewer,
rtracklayer, VennDiagram, DBI, grDevices, graphics, stats,
utils, GenomeInfoDb, grid, tximport (>= 1.7.1), edgeR,
futile.logger, stringr, dplyr, magrittr, readr, XVector
DESeq2 (>= 1.10.0), statmod, Hmisc, plotrix, stringr, Biobase
(>= 2.30.0), locfit, BiocGenerics (>= 0.7.5), BiocParallel,
genefilter, geneplotter, S4Vectors, IRanges, GenomicRanges,
methods, XML (>= 2.3-0), graph, utils, RCurl
data.table, BiocParallel, sqldf, stats, grid, grDevices
stringr, factoextra, kernlab, ggplot2, reshape2, gplots,
caret, RCurl, XML, class, praznik, R.utils, e1071,
randomForest, httr, jsonlite, sva (>= 3.30.1), cqn (>= 1.28.1),
edgeR (>= 3.24.3), biomaRt (>= 2.38.0), limma (>= 3.38.3),
arrayQualityMetrics (>= 3.38.0), tximport (>= 1.10.1),
tximportData (>= 1.10.0), rhdf5 (>= 2.26.2), Biobase, multtest,
pathview (>= 1.22.3), grDevices, graphics, stats, utils
Rcpp (>= 0.11.0), DOSE, ggtree, gridExtra, ape, grid, png,
Biobase, sva, reshape2, utils, grDevices, org.Hs.eg.db,
clusterProfiler, ggplot2, ReactomePA
BiocGenerics, S4Vectors, IRanges, GenomicRanges, data.table,
reshape2, utils, stats, methods
methods, stats, utils, AnnotationDbi, RSQLite, DBI, Biobase
akima, ggplot2, irr, jsonlite, parallel, plot3D, plyr, RCurl,
ROCR, testthat
BiocParallel, circlize, compiler, ComplexHeatmap, ggplot2,
gplots, grDevices, grid, knitr, Matrix, methods, RColorBrewer,
SingleCellExperiment, splines, stats, SummarizedExperiment,
utils
scales, cluster, graphics, ggpubr, gridExtra, vegan, rio,
MultiAssayExperiment, emmeans, reshape2, data.table
Rcpp (>= 0.12.2), RcppArmadillo (>= 0.8.100.1.0), fpc, vegan,
mclust, apcluster, ggplot2, ellipse, limma, utils, statmod,
MASS, igraph, grDevices, graphics, fastcluster, ggdendro, zoo,
stats, amap, Rtsne, gmodels
grid, SQUAREM, LaplacesDemon, stats, graphics, utils, ggplot2,
gridBase, Biostrings
DelayedArray, GenomicRanges, HDF5Array, Matrix, stats,
stringr, utils
cgdsr, parallel, stringr, reshape2, data.table, RColorBrewer,
methods, LowMACAAnnotation, BiocParallel, motifStack,
Biostrings, httr, grid, gridBase
data.table, plyr, dplyr, reshape, VennDiagram, ggplot2, ineq,
RColorBrewer, circlize, grid, utils, stats, ggtree, msa,
Biostrings, phangorn, stringdist, UpSetR
ggplot2, Matrix, doSNOW, NMF, RColorBrewer, cluster, parallel,
foreach, doParallel, matrixcalc, dendextend, sigclust, Rtsne,
survival, corpcor, umap
parallel, Rcpp, BiocGenerics, S4Vectors, IRanges,
GenomicRanges, SummarizedExperiment, BiSeq
RColorBrewer, gplots, bbmle, statmod, grDevices, graphics,
stats, matrixStats, Matrix, irlba, reldist, Hmisc, methods
readxl, graphics, tools, utils, grDevices, ggplot2, ggrepel,
methods, stats, latticeExtra, lattice, rmarkdown, png, grid,
gridExtra, prettydoc, rvest, xml2
VGAM, coda, BSgenome, BSgenome.Hsapiens.UCSC.hg19, S4Vectors,
methods, preprocessCore, GenomicAlignments, Rsamtools,
Biostrings, GenomicRanges, IRanges, VariantAnnotation,
SummarizedExperiment, GenomeInfoDb, rtracklayer, graphics,
stats, grDevices, utils, zlibbioc, vcfR
clusterProfiler, DOSE, enrichplot, gridExtra, biomaRt, sva,
ggsci, ggplot2, ggrepel, ggpubr, data.table, pheatmap, png,
grDevices, grid, stats, utils, dendextend, scales, Biobase,
msigdbr, KEGGgraph, KEGGREST, graph, graphics, pathview, XML
Biobase, BiocGenerics, S4Vectors, data.table, ggplot2, plyr,
stringr, abind, methods, parallel, reshape2, stats, stats4,
graphics, utils, SummarizedExperiment(>= 1.5.3), progress
stats, graphics, utils, limma (>= 3.30.13),
SummarizedExperiment (>= 1.10.0), preprocessCore (>= 1.36.0),
BiocFileCache, rappdirs, rpx, xml2, RCurl, ggplot2, reshape2,
PairedData
BiocParallel, graphics, utils, stats, AnnotationDbi, GO.db,
org.Hs.eg.db, GGally, ggplot2, scales, cluster, WGCNA
GenomicAlignments, GenomicRanges, IRanges, Biostrings,
DNAcopy, Rsamtools, parallel, stringr
GenomicRanges, limma, DMRcate, vegan, BiocGenerics, minfi,
IRanges, S4Vectors, methods, parallel, ggplot2 (>= 2.0.0),
permute, Gviz, missMethyl, isva, SummarizedExperiment,
SmartSVA, graphics, stats, utils, matrixStats
AnnotationDbi, Biobase, BiocParallel, compiler, data.table,
edgeR, futile.logger, ggdendro, ggplot2, GO.db, GOstats, graph,
graphics, grDevices, grid, GSEABase, ismev, limma, matrixStats,
org.Hs.eg.db, RBGL, reshape2, Rgraphviz, RJSONIO, stats, utils,
vegan
methods, Formula, data.table, pracma, MCMCpack, coda, modeest,
testthat, Rcpp, scales,
BiocGenerics, S4Vectors, IRanges, GenomicRanges, data.table,
ggplot2, Biobase, stats, bsseq, methods
gdata, pls, sfsmisc, MASS, rpart, genefilter, fpc, ggvis,
shiny, gbm, RColorBrewer, hwriter, threejs (>= 0.2.2), mlbench,
stats4, tools, grDevices, graphics, stats
methods, DESeq2, edgeR, limma, Biobase, SummarizedExperiment,
plyr, foreach, utils, sSeq, xtable
ensemblVEP (>= 1.20.0), gmapR, Rsamtools, VariantAnnotation,
BiocParallel, Biobase, BiocGenerics, dplyr, GenomeInfoDb,
GenomicRanges, IRanges, S4Vectors, tidyr, VariantTools,
magrittr, methods, grDevices, graphics, stats, utils, stringr,
data.table
GenomicRanges, locfit, BSgenome, Biostrings, shiny, ggplot2,
RColorBrewer, graphics, grDevices, parallel, S4Vectors, methods
Maaslin2, metafor, fpc, igraph, ggplot2, dplyr, tidyr,
cowplot, utils, stats, grDevices
grDevices, graphics, stats, utils, WGCNA, dynamicTreeCut,
igraph, cluster, AMOUNTAIN, RColorBrewer
rhdf5, dplyr, reshape2, pheatmap, corrplot, ggplot2,
ggbeeswarm, methods, scales, GGally, RColorBrewer, cowplot,
ggrepel, MultiAssayExperiment, Biobase, doParallel, foreach,
reticulate, grDevices, stats, utils
HiddenMarkov, zoo, methods, matrixStats, dplyr, stringi,
lazyeval, rlang, stats, utils, purrr, scales, stringr, tibble,
tidyr, ggplot2, Biobase, IRanges, S4Vectors
BiocParallel, methods, progress, stats, SummarizedExperiment
MSnbase (>= 1.12.1), mzID (>= 1.3.5), R.cache, foreach,
doParallel, parallel, methods, iterators, data.table, Biobase,
ProtGenerics, reshape2, dplyr, mzR
BiocParallel, IRanges (>= 2.13.28), plyr, preprocessCore, vsn,
grid, stats4, affy, impute, pcaMethods, MALDIquant (>= 1.16),
mzID (>= 1.5.2), digest, lattice, ggplot2, XML, scales, MASS,
Rcpp
shiny, MSstatsQC, ggExtra, gridExtra, plotly, dplyr,
RecordLinkage, grid
ggplot2, BiocParallel, caret, gridExtra, reshape2, stats,
utils, grDevices, graphics, MSstats
limma, lme4, lmerTest, dplyr, tidyr, statmod, methods,
reshape2, data.table, matrixStats, stats, utils, ggplot2,
grDevices, graphics, MSstats
lme4, marray, limma, gplots, ggplot2, methods, grid, ggrepel,
preprocessCore, reshape2, survival, statmod, minpack.lm, utils,
grDevices, graphics, stats, doSNOW, snow, foreach, data.table,
MASS, dplyr, tidyr, broom, purrr, stringr
utils, IRanges, GenomeInfoDb, GenomicRanges, GenomicFeatures,
VariantAnnotation, Homo.sapiens, MTseeker
xml2, utils, gmapR, methods, IRanges, Biobase, circlize,
jsonlite, graphics, Rsamtools, grDevices, Biostrings,
rtracklayer, VariantTools, Homo.sapiens, BiocGenerics,
GenomicRanges, GenomicFeatures, SummarizedExperiment
glm2, ppcor, qvalue, car, boot, grid, ggplot2, gridExtra,
igraph, SummarizedExperiment, KEGGgraph, RCurl, KEGGREST,
ComplexHeatmap, stats, utils
robustbase, biglm, pcaPP, edgeR, metagenomeSeq, lpsymphony,
pscl, pbapply, car, dplyr, vegan, chemometrics, ggplot2,
pheatmap, cplm, logging, data.table, lmerTest, hash, optparse,
MASS, MuMIn, grDevices, stats, utils
utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb,
BSgenome
methods, AnnotationDbi (>= 1.31.19), RSQLite, Biobase
data.table, parallel, ROCR, matrixcalc, clues, ggplot2,
doParallel, foreach, MCMCpack, cowplot, magrittr, mvtnorm,
truncnorm, assertthat, BiocStyle, stats, utils
flowCore (>= 1.4),tidyr (>=
0.7),fastcluster,ggplot2,metafor,cluster,FlowSOM, grDevices,
graphics, stats, utils
beanplot (>= 1.2), GenomicRanges (>= 1.34.0), gplots (>=
3.0.1), Matrix (>= 1.2), matrixStats (>= 0.54), Rcpp,
RColorBrewer (>= 1.1), stats (>= 3.4), SummarizedExperiment (>=
1.12), utils (>= 3.4)
methods, data.table, dplyr, tidyr, plotly, ggplot2, cowplot,
parallel, metafor, metap, rlang, topconfects, grDevices,
graphics, stats, htmlwidgets
KEGGgraph, hpar, igraph, RCurl, KEGGREST, EnsDb.Hsapiens.v75,
stats, graphics, utils, org.Hs.eg.db, biomaRt, AnnotationDbi,
MWASTools, mygene
methods, utils, stats, S4Vectors, bsseq, DSS, methylKit,
DNAcopy, GenomicRanges, IRanges, GenomeInfoDb, BiocParallel
Biobase, BiocParallel, BiocGenerics, ggplot2, grid, gridBase,
grDevices, graphics, hexbin, matrixStats, minfi (>= 1.22.0),
methods, RColorBrewer, shiny, stats, SummarizedExperiment,
utils
foreach, RPMM, RColorBrewer, ggplot2, RCurl, impute,
data.table, limma, R.matlab, digest
methods, BiocGenerics, Biobase, S4Vectors (>= 0.23.18),
IRanges, GenomeInfoDb, GenomicRanges (>= 1.17.16),
SummarizedExperiment (>= 1.15.4), oligoClasses, DNAcopy, ff,
foreach, matrixStats, lattice, data.table, grid, stats, utils
methods, assertive, BiocGenerics, GenomicRanges, S4Vectors,
IRanges, XVector, stringi, stringr
parmigene, randomForest, SummarizedExperiment, gplots,
circlize, RColorBrewer, HiveR, clusterProfiler, DOSE, Biobase,
limma, grDevices, graphics, TCGAbiolinks, GEOquery, stats,
RISmed, grid, utils
methods, stats, grid, S4Vectors, IRanges (>= 1.13.5),
Biostrings, lattice, rGADEM, utils
graphics, grDevices, stats, methods, fields
methods, GenomicRanges (>= 1.25.93), BiocGenerics, S4Vectors
(>= 0.23.19), IRanges, Biobase, stats, tidyr, utils
BiocGenerics, GenomicRanges, IRanges, S4Vectors,
SummarizedExperiment, methods, utils, ggplot2, ggrepel, qqman,
limma
stats, parallel, S4Vectors, BiocGenerics (>= 0.18.0),
VariantAnnotation (>= 1.18.1), reshape2 (>= 1.4.1), plyr (>=
1.8.3), ggplot2 (>= 2.1.0), pracma (>= 1.8.8),
SummarizedExperiment (>= 1.2.2), IRanges (>= 2.6.0),
GenomeInfoDb (>= 1.12.0), Biostrings (>= 2.40.0), ggdendro (>=
0.1-20), cowplot (>= 0.9.2)
graphics, methods, baseline, signal, GenomicAlignments,
GenomeInfoDb, rtracklayer, limma, trackViewer, stats, utils,
Rsamtools, metap, EmpiricalBrownsMethod,ATACseqQC, corrplot,
csaw
DESeq2, mgcv(>= 1.8-24), BiocParallel, genefilter, methods,
stats,
edgeR, stats, MASS, car, mppa, BiocParallel, ggplot2, reshape2
graph, KEGGgraph, methods, RBGL, RCy3, R.methodsS3
vsn, preprocessCore, limma, MASS, ape, car, ggplot2, methods,
Biobase, RcmdrMisc, raster, utils, stats, SummarizedExperiment,
matrixStats, ggforce
multtest (>= 1.7.3), graphics, grDevices, stats, akima
HelloRanges, fpc, stats, MultiAssayExperiment, pdftools,
methods, grDevices, utils,clValid, NbClust, cowplot, rmarkdown,
kableExtra, rtracklayer, IRanges, GenomeInfoDb, reshape2,
ggplot2, factoextra, rgl, corrplot, MASS, graphics, FactoMineR,
PerformanceAnalytics, tidyr, data.table, cluster, magick
BBmisc, Biobase, BiocGenerics, compiler, DESeq2 (>= 1.16.1),
GenomicRanges, ggplot2, grDevices, heatmaply, pheatmap, gplots,
graphics, IRanges, matrixStats, plotly, plyr, pcaMethods,
PRROC, RColorBrewer, Rcpp, reshape2, S4Vectors, scales,
splines, stats, utils
stats, utils, methods, BiocParallel, SummarizedExperiment,
limma, fdrtool, Rcpp
utils, ape, Biostrings, GenomicRanges, IRanges, methods,
topGO, jsonlite
SummarizedExperiment, gss, plyr, zoo, pracma, ggplot2,
BiocParallel, parallel, grDevices, graphics, stats, utils,
methods, BiocGenerics
GEOmetadb, RSQLite, data.table, methods, tools, utils,
AnnotationDbi, RCurl, stats, DT, knitr, Rtsne,
dendextend, clusteval, ggplot2, ggfortify
biomaRt, grDevices, graphics, utils, methods,
Rcpp (>= 0.12.4), parallel, data.table, graph, Rgraphviz,
gtools, igraph, methods, RColorBrewer, grDevices, car, dplyr,
smatr, ggplot2, ggrepel, nem
RSQLite, S4Vectors, GenomeInfoDb, IRanges, GenomicRanges,
GenomicFeatures, AnnotationDbi, methods, tools, utils,
BiocFileCache, DBI, dbplyr
Biobase, BiocManager, GenomicRanges (>= 1.31.13), graph,
IRanges, RBGL, DBI, S4Vectors (>= 0.9.25), stats
e1071, gplots, gtools, limma, MASS, mRMRe, randomForest, ROCR,
sva
SummarizedExperiment, S4Vectors, stats, methods, abind,
BiocParallel
stats, utils, dplyr, rlang, iterators, parallel, foreach,
doParallel, qvalue, rtracklayer, ggplot2, GenomicRanges,
S4Vectors
methods, stats, utils, Matrix, DelayedMatrixStats,
DelayedArray, BiocSingular, BiocParallel, Rcpp, dqrng
ROTS, limma, affy, genefilter, preprocessCore,
aroma.affymetrix, aroma.core
S4Vectors (>= 0.9.25), Rsamtools (>= 1.10.2), GenomicFeatures
(>= 1.19.8), biomaRt (>= 2.17.1), stringr, RCurl, Nozzle.R1,
VariantAnnotation (>= 1.7.28), rtracklayer, RSQLite, ggplot2,
AnnotationDbi, customProDB (>= 1.21.5), pheatmap, dplyr,
processx, readr, seqinr
stats, CompQuadForm, Matrix, survival, Biobase, GSEABase
bnlearn, reshape2, sva, stats, utils, Biobase
shiny, tools, jsonlite, pcaMethods, FindMyFriends, igraph,
stats, utils
limma, corpcor,matrixStats, reshape2, scales, ggplot2,
rentrez, DT, tidyr, plyr, dplyr, phyloseq, shiny, stats,
methods, XML, graphics, utils, BiocStyle, edgeR, DESeq2,
ComplexHeatmap, plotly, webshot, vegan, shinyjs, glmnet,
gmodels, ROCR, RColorBrewer, knitr, devtools, ape
goseq, Biobase, DOSE, reshape2, igraph, org.Hs.eg.db,
org.Mm.eg.db, BiocGenerics, AnnotationDbi, JunctionSeq,
BiasedUrn, GO.db,gdata, geneLenDataBase, grDevices, graphics,
stats, utils, VennDiagram, RColorBrewer, ensembldb,
AnnotationHub, S4Vectors, dplyr, plotly, webshot, htmlwidgets ,
mgcv ,gridExtra, grid ,gplots, tibble , EnrichmentBrowser,
annotate , KEGGREST
cleaver (>= 1.3.6), Biobase, Biostrings (>= 2.47.5), IRanges
(>= 2.13.11), S4Vectors (>= 0.17.24), mzID, mzR (>= 1.99.1),
MSnbase (>= 1.15.5), Pviz, biomaRt, GenomicRanges (>= 1.31.7),
rtracklayer (>= 1.39.6), ensembldb (>= 1.99.13), BiocParallel,
AnnotationFilter
Matrix, ptw, ggplot2, gridExtra, matrixStats, reshape2,
methods, graphics, stats
Biobase, piano, magicaxis, RColorBrewer, parallel, caTools,
methods, downloader, stats, utils, graphics, grDevices, lsa,
reshape2
SmoothWin, methods, car, nlme, nortest, MASS, msgps, logistf,
knitr, tools, pingr, ggplot2, reshape, corrplot, graph, lme4,
graphics, grDevices, utils, stats
ape, bioDist, BiocStyle, Biostrings, colourpicker, data.table,
DT, energy, ExperimentHub, ggplot2, gridExtra, pbapply,
RColorBrewer, shiny, shinyBS, shinyjs, OmaDB, plyr, xml2, zoo
Matrix, ggbio, GenomicRanges, GenomeInfoDb, supraHex, scales,
grDevices, ggrepel, ROCR, randomForest, glmnet, Gviz, lattice,
caret, plot3D, stats
bnlearn (>= 4.4.1), C50 (>= 0.1.2), MASS, matrixStats,
partykit, Rgraphviz, WGCNA, GO.db, impute, preprocessCore,
grDevices, graphics, stats, utils, parallel, pheatmap (>=
1.0.8), dplyr, gdata
DESeq2, ROTS, vsn, stats, utils, methods, gridExtra, MASS,
data.table, ggplot2, Biobase, S4Vectors, BiocParallel
graphics, grDevices, stats, utils, methods, cgdsr, parallel,
stringr, reshape2, data.table, RColorBrewer, BiocParallel,
magrittr, biomaRt, XML, httr, jsonlite, ggplot2, ggrepel, grid,
S4Vectors, IRanges, GenomicRanges, LowMACAAnnotation,
googleVis, shiny, shinyBS, DT, brglm, matrixStats
diagram, stringr, ggplot2, reshape2, grDevices, matrixcalc,
stats, gplots, methods, utils, graphics
DAPAR (>= 1.18.1), DAPARdata (>= 1.16.0), rhandsontable,
data.table, shinyjs, DT, shiny, shinyBS, shinyAce, highcharter
(>= 0.7.0), htmlwidgets, webshot, R.utils, shinythemes,
XML,later, rclipboard, shinycssloaders, future, promises,
colourpicker, BiocManager, shinyTree, shinyWidgets, sass,
tibble
gdata, biomaRt, ggplot2, ggrepel, gtools, stats, matrixStats,
graphics
mzR (>= 2.3.2), MSnbase, Biostrings, GenomeInfoDb, utils,
Biobase, BiocManager, RCurl
GenomicRanges (>= 1.20.3), IRanges (>= 2.2.1), RColorBrewer,
S4Vectors, data.table, grDevices, graphics, stats, utils,
SummarizedExperiment, GenomeInfoDb, GenomicFeatures, Rsamtools,
Biostrings, BiocGenerics, rtracklayer, ggplot2, gridExtra,
futile.logger, VGAM, tools, methods, rhdf5, Matrix
methods, grDevices, graphics, utils, BiocGenerics, S4Vectors
(>= 0.9.25), IRanges, BiocManager, Biobase, Biostrings,
BSgenome, Rsamtools (>= 1.99.1), GenomicFeatures (>= 1.17.13),
ShortRead (>= 1.19.1), GenomicAlignments, BiocParallel,
GenomeInfoDb, rtracklayer, GenomicFiles, Rhisat2, AnnotationDbi
methods, parallel, clues, ggplot2, pheatmap, clValid, igraph,
data.table, reshape2, Hmisc, RCurl, BiocGenerics, S4Vectors,
IRanges (>= 2.13.12), GenomeInfoDb, GenomicRanges (>= 1.31.8),
ggbio
utils, grDevices, graphics, stats, tools, xtable, R2HTML,
TeachingDemos, BiocGenerics, S4Vectors (>= 0.17.25), IRanges
(>= 2.13.12), XVector, GenomicRanges (>= 1.31.8),
SummarizedExperiment, biomaRt, BSgenome (>= 1.47.3), Rsamtools,
ShortRead (>= 1.37.1)
biomaRt, AnnotationDbi, GenomicRanges,
BSgenome.Hsapiens.UCSC.hg19, GenomeInfoDb (>= 1.12.0),
Biostrings, rtracklayer, org.Hs.eg.db, GenomicFeatures,
rmarkdown (>= 0.9.5), genomation (>= 1.5.5), knitr (>= 1.12.3),
BiocGenerics, S4Vectors, stats, plotrix, pbapply, RSQLite,
proxy, DBI, pheatmap, ggplot2, cowplot, ggseqlogo, methods,
utils
RColorBrewer, alabama, edgeR, reshape2, tseries, vegan, VGAM,
ggplot2 (>= 2.2.1.9000), nleqslv, phyloseq, tensor, MASS,
stats, grDevices, graphics, methods
httr, methods, RJSONIO, XML, utils, BiocGenerics, igraph,
stats, graph, R.utils
methods, httpuv (>= 1.5.0), BiocGenerics, base64enc, utils
readr, rtracklayer, graphics, stats, utils, methods, settings,
BiocGenerics, S4Vectors, Biostrings, GenomicRanges, IRanges,
GenomeInfoDb, BiocParallel, doParallel, parallel, foreach,
caret, kernlab, ranger, BSgenome, AnnotationHub, org.Hs.eg.db,
impute, iterators
httr, rJava, GenomicRanges, rtracklayer, data.table, utils,
plyr, xml2, methods, S4Vectors, dplyr, stats, glue,
BiocGenerics
graphics, stats, utils, grid, gridExtra, reshape2, gplots,
ggplot2, plotrix, RColorBrewer, STRINGdb, MCL, linkcomm,
dynamicTreeCut, sqldf, gsubfn, hash, png, igraph,
BgeeDB, knitr, RITANdata
glmnet, pROC, ggplot2, graphics, stats, Biobase, methods,
utils
plyr, dplyr, DBI, data.table, reshape2, methods, sqldf, tools,
utils, RSQLite
Rcpp (>= 0.12.5), consensusSeekeR, BiocGenerics, GenomeInfoDb,
S4Vectors (>= 0.23.10), BiocParallel, stats, graphics, methods,
grDevices
Rsamtools, tools, reticulate, ballgown, gridExtra, rafalib,
FactoMineR, factoextra, corrplot, PerformanceAnalytics,
reshape2, DESeq2, systemPipeR, systemPipeRdata,
clusterProfiler, org.Hs.eg.db, org.Sc.sgd.db, stringr,
pheatmap, grDevices, graphics, stats, utils, DOSE, Biostrings,
parallel
stats, grDevices, grid, ggplot2, gplots, utils, TMB, nloptr
methods, S4Vectors, IRanges, BiocGenerics, GenomicRanges, Gviz
methods, assertive, BiocGenerics, S4Vectors, IRanges,
GenomicRanges, stats, ranger
methods, S4Vectors, BiocGenerics, IRanges, GenomicRanges, Gviz
methods, stats, graphics, grDevices, grid, matrixStats,
assertive, BiocGenerics, XVector, Biostrings, BiocParallel,
GenomicFeatures, GenomicAlignments, GenomeInfoDb, rtracklayer,
Rsamtools, BSgenome, RColorBrewer, colorRamps, biovizBase,
ggplot2, Gviz, reshape2, stringi, stringr, ROCR
Biostrings(>= 2.32.1), GenomicRanges(>= 1.16.4), IRanges(>=
2.10.5), Rsamtools(>= 1.16.1), rtracklayer(>= 1.24.2),
GenomicAlignments(>= 1.5.12), S4Vectors(>= 0.14.7), graphics,
stats, utils
ggplot2, parallel, NBPSeq, qvalue, SummarizedExperiment,
stats, utils, methods
BiocGenerics, data.table, DelayedArray, GenomicRanges,
GenomeInfoDb, httr, IRanges, limma, methods, RaggedExperiment,
RCircos, RCurl, RJSONIO, S4Vectors (>= 0.23.10), stats,
stringr, SummarizedExperiment, survival, TCGAutils, XML
XML, assertthat, stringi, rvest, data.table, xml2, dplyr,
purrr, survival, survminer, ggplot2, ggthemes, viridis, knitr,
scales
RedeR, minet, viper, mixtools, snow, limma, data.table,
IRanges, igraph, S4Vectors, SummarizedExperiment
survival, RColorBrewer, grDevices, graphics, stats, utils,
scales, data.table, egg, ggplot2, pheatmap, dunn.test
GENLIB, gRain, snpStats, kinship2, methods, stats, utils
BiocGenerics, GenomeInfoDb, IRanges, methods, S4Vectors,
stats, SummarizedExperiment
S4Vectors, IRanges, GenomeInfoDb, GenomicRanges, gtools,
BSgenome, BSgenome.Hsapiens.UCSC.hg19,
TxDb.Hsapiens.UCSC.hg19.knownGene, phastCons100way.UCSC.hg19,
SummarizedExperiment, GenomicScores
methods, BiocGenerics, S4Vectors, IRanges, GenomeInfoDb,
ggbio, ggplot2, exomeCopy, SomaticSignatures, Rsamtools, shiny,
VGAM, dplyr, reshape2
utils, grDevices, stats, graphics, rgl, plotrix, S4Vectors (>=
0.23.19), IRanges, GenomeInfoDb, GenomicAlignments
AUCell (>= 1.1.6), BiocGenerics, data.table, feather,
graphics, GSEABase, methods, R.utils, stats,
SummarizedExperiment, utils
stats, utils, methods, RCurl, rjson, foreach, doParallel,
Biostrings, GOSemSim, ChemmineR, fmcsR, rcdk (>= 3.3.8)
dplyr, rappdirs, jsonlite, methods, utils, tximport
utils, stats, BiocParallel, batchtools, DiagrammeR, shiny,
R.utils, codetools
jsonlite, httr, progress, ggplot2, methods
AnnotationDbi, DOSE (>= 3.5.1), enrichplot, ggplot2, ggraph,
reactome.db, igraph, graphite
parallel, S4Vectors (>= 0.17.25), IRanges (>= 2.13.12),
GenomeInfoDb, GenomicRanges, Biostrings, Rsamtools,
GenomicAlignments, rtracklayer, BSgenome (>= 1.47.3), gplots,
grid, MASS, gsmoothr, edgeR (>= 3.4.0), DNAcopy, Ringo,
aroma.affymetrix, Rsolnp, cluster
GenomicFeatures, SGSeq, GenomicRanges, methods, utils
BiocGenerics, GenomeInfoDb, GenomicRanges, IRanges, reshape2,
GenomicFeatures, grid, plyr, S4Vectors, GenomicAlignments,
ggplot2, ggbio, Rsamtools, rtracklayer, data.table, sqldf
Rcpp (>= 0.12.8), methods, S4Vectors, GenomicRanges,
SummarizedExperiment, devtools, TBX20BamSubset,
TxDb.Mmusculus.UCSC.mm9.knownGene, org.Mm.eg.db, DESeq2,
BiocStyle
BiocGenerics (>= 0.25.1), Biostrings, IRanges, methods,
S4Vectors, knitr (>= 1.7), BiocStyle, plyr, markdown, grid,
reshape2, Rcpp (>= 0.11.6), biovizBase, shiny, Rsamtools,
GenomicAlignments, GenomicFiles
utils, BiocGenerics (>= 0.25.1), S4Vectors (>= 0.17.25),
IRanges (>= 2.13.12), XVector (>= 0.19.7), zlibbioc, bitops,
BiocParallel
methods, stats, utils, RcppParallel, SPAtest (>= 3.0.0)
Rdpack, grDevices, methods, stats, utils, xml2, rsvg, igraph,
rmarkdown, knitr, SummarizedExperiment, AnnotationDbi
graphics, stats, utils, methods, e1071, parallel, foreach,
doParallel, doRNG, shiny, ggplot2, pheatmap (>= 1.0.8), ROCR,
robustbase, rrcov, cluster, WriteXLS, Rcpp (>= 0.11.1),
SummarizedExperiment, SingleCellExperiment, BiocGenerics,
S4Vectors
SingleCellExperiment, SummarizedExperiment, stats, methods,
graphics, grDevices, parallel, quantreg, cluster, moments,
data.table, BiocParallel, S4Vectors, ggplot2, forcats,
BiocGenerics
SummarizedExperiment, data.table, pheatmap, seriation,
ComplexHeatmap, circlize, methods
AnnotationDbi, BiocGenerics (>= 0.31.5), Biostrings (>=
2.47.6), GenomicAlignments (>= 1.15.7), GenomicFeatures (>=
1.31.5), GenomeInfoDb, RUnit, S4Vectors (>= 0.23.19),
grDevices, graphics, igraph, parallel, rtracklayer (>= 1.39.7),
stats
beanplot, glmnet, graphics, grDevices, grid, gridBase,
gridExtra, LiblineaR, matrixStats, methods, ParamHelpers, pROC,
PRROC, RColorBrewer, scales, stats, stringr, utils, infotheo,
progress, corrplot
mzR, ggplot2, grid, reshape2, grDevices, stats, utils
parallel, Matrix, stats, methods, Rcpp, pracma, RcppAnnoy,
RSpectra
magrittr (>= 1.5), matrixStats, dplyr, stats, tidyr, utils,
Rcpp (>= 1.0.0)
scales, plyr, Hmisc, AnnotationDbi, org.Hs.eg.db, ggplot2,
reactome.db, KEGG.db, BioNet, goseq, methods, IRanges, igraph,
Biobase,tools, S4Vectors, geneLenDataBase, grDevices, graphics,
stats, utils
methods, graphics, lattice, grid, foreach, utils, Biobase,
S4Vectors (>= 0.9.25), IRanges, GenomeInfoDb, GenomicRanges,
SummarizedExperiment, oligoClasses (>= 1.31.1)
DESeq2, cluster, ggplot2, lattice, GenomeInfoDb, BiocParallel,
VariantAnnotation, BiocGenerics, IRanges, methods,
SummarizedExperiment, RColorBrewer, Biostrings, grDevices,
gridExtra, stats, grid, utils, reshape2, scales, S4Vectors
graphics, ggplot2, seqLogo, Biostrings, biomaRt,
GenomicAlignments, GenomicRanges, GenomicFeatures, Gviz,
IRanges, S4Vectors, GenomeInfoDb, utils, plyr,stringr, methods,
BSgenome.Mmusculus.UCSC.mm9, googleVis
Biobase, stats, ppcor, logging, foreach, doRNG, data.table,
MASS, expm, gRbase, glmnet, igraph, iterators,
DBI, lazyeval, methods, tools, stats, BiocGenerics, RSQLite,
tibble
GenomicRanges, IRanges, S4Vectors, BiocGenerics, GenomeInfoDb,
Gviz, Rsolnp
Biobase, gridExtra, ggplot2, methods, stats, grid, MASS,
calibrate, gplots, edgeR, limma, foreach, affy
png, sqldf, plyr, igraph, RCurl, methods, RColorBrewer,
gplots, hash, plotrix
methods, stats, SummarizedExperiment, edgeR, ggplot2, limma,
lmtest, parallel, pls
data.table, reshape2, grid, ggplot2, stats, grDevices,
graphics, utils, biomaRt
tibble, dplyr, FNN, flowCore, Rtsne, ggplot2, magrittr, utils,
stats, readr
methods, parallel, IRanges, GenomicRanges, GenomeInfoDb,
Biostrings, S4Vectors
e1071, GenomicRanges, gdsfmt, ggplot2, GGally, IRanges,
methods, rbokeh, RColorBrewer, reshape2, rmarkdown, S4Vectors,
stats, utils
grDevices, graphics, stats, methods, Biobase, gdsfmt,
GenomicRanges, IRanges, S4Vectors, GWASExactHW, logistf,
Matrix, dplyr, rlang, tidyr
Rcpp, methods, stats, xptr, BiocGenerics
Biobase, S4Vectors (>= 0.17.25), IRanges (>= 2.13.12),
GenomeInfoDb (>= 1.15.2), GenomicRanges (>= 1.31.8), hwriter,
methods, zlibbioc, lattice, latticeExtra,
quadprog (>= 1.5-5), methods, Biobase, BSgenome (>= 1.46.0),
VariantAnnotation (>= 1.24.5), Biostrings, GenomeInfoDb,
GenomicRanges, rtracklayer, SummarizedExperiment, graphics,
stats, utils
S4Vectors (>= 0.23.19), methods, BiocGenerics, utils, stats
methods, Matrix, S4Vectors, DelayedArray, DelayedMatrixStats,
BiocNeighbors, BiocParallel, stats, utils, Rcpp, ExperimentHub
GenomicRanges, exomeCopy, stringr, IRanges, S4Vectors
methods, ggplot2, scater (>= 1.13.27), shiny, jpeg, magrittr,
utils, S4Vectors
BiocGenerics (>= 0.31.6), nnlasso, nnls, parallel, data.table,
Biostrings, GenomicRanges, IRanges, BSgenome,
BSgenome.Hsapiens.1000genomes.hs37d5, GenomeInfoDb, ggplot2,
gridExtra
dplyr, PRIMME, cluster, Matrix, parallel, BiocParallel,
magrittr, HiCcompare, GenomicRanges
httr, igraph, utils, stats, miRNAtap, miRNAtap.db,
AnnotationDbi, org.Hs.eg.db, ggplot2, gridExtra, gplots,
grDevices, lattice, latticeExtra, visNetwork, TCGAbiolinks,
gdata, MAGeCKFlute,networkD3
methods, utils, graphics, igraph, BiocGenerics, S4Vectors (>=
0.17.5), BiocParallel, IRanges (>= 2.20.1), GenomeInfoDb,
GenomicRanges (>= 1.23.21), GenomicFeatures, Rsamtools,
GenomicAlignments, graph, Rgraphviz
SpidermiR, graphite, AnnotationDbi, e1071, ROCR, MLmetrics,
grDevices, igraph, reshape2, ggplot2
methods, assertive, BiocGenerics, XVector, stringr, stringi
assertthat, Biostrings, stringr, dplyr, methods, rlang
Rtsne, scatterplot3d, caret, e1071, ggplot2, gridExtra,
networkD3, ggrepel, graphics, stats, org.Hs.eg.db,
AnnotationDbi
utils, stats, tools, Matrix, BiocGenerics (>= 0.15.3),
S4Vectors (>= 0.23.20), IRanges (>= 2.13.16), GenomeInfoDb (>=
1.13.1)
seqinr, methods, Biostrings, stringr, BiocGenerics
shiny (>= 0.14.1), downloader (>= 0.4), grid, DT, plotly,
readr, maftools, stringr (>= 1.1.0), SummarizedExperiment,
ggrepel, data.table, caret, shinyFiles (>= 0.6.2), ggplot2 (>=
2.1.0), pathview, ELMER (>= 2.0.0), clusterProfiler, parallel,
TCGAbiolinks (>= 2.5.5), shinyjs (>= 0.7), colourpicker,
sesame, shinyBS (>= 0.61)
downloader (>= 0.4), survminer, grDevices, dplyr, gridExtra,
graphics, tibble, grid, GenomicRanges, XML (>= 3.98.0),
data.table, EDASeq (>= 2.0.0), edgeR (>= 3.0.0), jsonlite (>=
1.0.0), plyr, knitr, methods, biomaRt, ggplot2, ggthemes,
survival, stringr (>= 1.0.0), IRanges, scales, rvest (>=
0.3.0), stats, utils, selectr, S4Vectors, R.utils,
SummarizedExperiment (>= 1.4.0), genefilter, readr,
RColorBrewer, doParallel, GenomeInfoDb, GenomicFeatures,
parallel, tools, tidyr, sva, limma, purrr, xml2, httr (>=
1.2.1), purrrogress, ggrepel (>= 0.6.3)
AnnotationDbi, BiocGenerics, GenomeInfoDb, GenomicFeatures,
GenomicRanges, GenomicDataCommons, IRanges, methods,
MultiAssayExperiment, RaggedExperiment (>= 1.5.7), rvest,
S4Vectors, stats, stringr, SummarizedExperiment, utils, xml2
edgeR, BiocGenerics, reshape2, GenomicRanges, IRanges,
SummarizedExperiment, GenomicAlignments, Rsamtools, e1071,
cluster, ggplot2, grid, grDevices, stats, utils, methods,
locfit
arules, fields, GenomicRanges, graphics, stringr, methods,
stats, gplots
GenomicRanges, IRanges, biomaRt, GenomicFeatures, grDevices,
dplyr, stats, utils, R.utils, methods, org.Hs.eg.db
GenomicRanges, S4Vectors, grDevices, graphics, stats, utils,
IRanges, methods
methods, dplyr, magrittr, miniUI, shiny, Rsamtools, GSEABase
gss, mvtnorm, stats, zoo, cluster, utils, BiocParallel,
flexclust, grDevices, graphics, Biobase, SPEM
GSVA (>= 1.26.0), pheatmap, grDevices, RColorBrewer, pracma,
GGally, R.utils, forestplot, ggplot2, ggpubr, survival, grid,
stats, methods
ggplot2, tidyr, foreach, doParallel, openxlsx, stringr, RCurl,
parallel, MASS
biobroom, broom, data.table, doParallel, foreach,
futile.logger, ggplot2, grDevices, gridExtra, grid, knitr,
limma, MASS, mefa, nls2, openxlsx (>= 2.4.0), parallel, plyr,
purrr, RColorBrewer, RCurl, reshape2, rmarkdown, splines,
stats, stringr, utils, VennDiagram, VGAM
bnlearn, Rgraphviz, gtools, parallel, foreach, doParallel,
iterators, RColorBrewer, circlize, cgdsr, igraph, grid,
gridExtra, xtable, gtable, scales, R.matlab, grDevices,
graphics, stats, utils, methods
AnnotationHub, BiocGenerics, BiocParallel, dplyr,
GenomicAlignments, GenomeInfoDb, GenomicRanges, gtools,
IRanges, methods, readxl, Rsamtools (>= 1.14.3), rtracklayer,
S4Vectors, SummarizedExperiment, tools, utils
AnnotationFilter, BiocGenerics (>= 0.25.1), BiocParallel,
Biostrings, ensembldb, ensemblVEP, GenomeInfoDb, GenomicRanges,
GGally, ggplot2, Gviz, limma, IRanges (>= 2.7.1), reshape2,
Rsamtools, S4Vectors (>= 0.11.11), SummarizedExperiment,
VariantAnnotation (>= 1.19.9)
grDevices, stats, utils, S4Vectors, IRanges, BiocGenerics,
reshape2, GenomeInfoDb, BiocParallel, Biostrings, cowplot,
graphics, GenomicAlignments, Hmisc
graphics, grDevices, methods, stats, utils, stringr,
assertthat
dynamicTreeCut, dplyr, edgeR, DESeq2, ggplot2 (>= 3.0.0),
graphics, Hmisc, limma, methods, magrittr, proxy, stats,
tibble, tidyr, vegan, viridis, utils
ggplot2, grid, gridExtra, deSolve, dplyr, locfit
methods, stats, utils, grDevices, htmlwidgets, jsonlite,
data.table, Biobase, GenomeInfoDb, IRanges, S4Vectors, knitr
Rcpp, graph, methods, Biobase, RBGL, SummarizedExperiment,
gRbase, limma, corpcor
BiocGenerics, S4Vectors (>= 0.9.25), IRanges, zlibbioc, gplots
methods, utils, ape, dplyr, SummarizedExperiment
stats, utils, graphics, grDevices, segmented, gplots,
parallel, magrittr, BiocParallel, DT, S4Vectors,
SummarizedExperiment, methods, shiny, shinyFiles
methods, rjson, GenomicRanges, IRanges, BiocParallel,
GenomeInfoDb, S4Vectors, SummarizedExperiment, utils
AnnotationHub, AnnotationDbi, BiocGenerics, Biostrings,
BSgenome, data.table (>= 1.9.4), DT, GenomicFeatures,
GenomeInfoDb, GenomeInfoDbData, GenomicAlignments,
GenomicRanges, ggplot2, ggrepel, gsubfn, mirbase.db, moments,
Organism.dplyr, S4Vectors, shiny, shinydashboard, shinyFiles,
shinyjs, Sushi, yaml
stringr, R.utils, WriteXLS, stats, doParallel, foreach,
GenomicRanges, IRanges, VariantAnnotation
tools, GenomicRanges, VariantAnnotation (>= 1.29.3),
GenomicFiles (>= 1.17.3), S4Vectors (>= 0.19.19), Rsamtools
Biobase, S4Vectors (>= 0.23.18), IRanges (>= 1.14.0),
oligoClasses (>= 1.31.1), foreach, matrixStats, data.table,
grid, lattice, methods, GenomeInfoDb (>= 1.11.4), crlmm, tools,
stats, utils, BSgenome.Hsapiens.UCSC.hg18
utils, DBI, zlibbioc, Biobase, S4Vectors (>= 0.17.24), IRanges
(>= 2.13.13), XVector (>= 0.19.7), Biostrings (>= 2.47.6),
AnnotationDbi (>= 1.27.9), rtracklayer (>= 1.39.7), BSgenome
(>= 1.47.3), GenomicFeatures (>= 1.31.3)
tools, utils, stats, methods, gdsfmt, SNPRelate, SeqArray,
SeqVarTools, DelayedArray, Biostrings, IRanges
utils, stats, Biobase, S4Vectors (>= 0.9.25), IRanges (>=
2.3.23), RBGL, graph, AnnotationDbi, BiocParallel, Biostrings
(>= 2.33.11), GenomeInfoDb (>= 1.3.6), GenomicRanges (>=
1.19.13), SummarizedExperiment, GenomicFeatures, Rsamtools (>=
1.17.8), BSgenome, GenomicScores (>= 1.0.0), Gviz, shiny,
shinythemes, shinyjs, DT, shinyTree
Rsamtools (>= 1.31.2), BiocGenerics, Biostrings, parallel,
GenomicFeatures (>= 1.31.3), Matrix, rtracklayer (>= 1.39.7),
BiocParallel, GenomeInfoDb, BSgenome, Biobase
utils, grDevices, stats, methods, dplyr, purrr, tibble,
magrittr, ggplot2, UpSetR, VennDiagram, grid, futile.logger
data.table, AnnotationDbi, AnnotationForge, biomaRt,
dendextend, DiagrammeR, DT, dynamicTreeCut, GOSemSim, ggplot2,
GO.db, grDevices, heatmaply, htmlwidgets, igraph, methods,
plotly, topGO, RColorBrewer, R.utils, scales, stats, UpSetR,
utils, webshot
limma, matrixStats, locfit, stats, graphics
pracma, matrixStats, locfit, ggplot2, methods, Biobase, dplyr,
magrittr, roar
stats, utils, data.table, IRanges, VariantAnnotation,
seqminer, ggplot2, biomaRt, readxl, S4Vectors
BiocGenerics, genefilter, graphics, grDevices, gtools,
MergeMaid, methods, stats, utils, mvtnorm, RColorBrewer,
GeneMeta, siggenes
mclust, plyr, alluvial, ggplot2, igraph, gridExtra, tools,
grDevices, graphics, utils, STRINGdb
methods, utils, zlibbioc, BiocGenerics, S4Vectors, IRanges
methods, stats, utils, BBmisc, Biobase, grDevices, ggplot2,
scales, ComplexHeatmap, parallel, doParallel, Rmisc, grid,
nlme, PharmacoGx, downloader
lsei, SomaticSignatures, VariantAnnotation, GenomeInfoDb,
reshape2, gridExtra, corrplot, dendextend, GetoptLong,
circlize, gtrellis, PMCMR, ComplexHeatmap, KEGGREST, grDevices
ggplot2, RColorBrewer, circlize, reshape2, VennDiagram, plyr,
flexdashboard, BiocParallel (>= 1.1.25), png, grid, gridExtra,
rmarkdown, knitr, vegan, ggcorrplot, ggdendro, plotly,
BiocStyle, stringr, utils, methods, grDevices, stats, tools,
graphics
methods, graphics, stats, utils, calibrate, origami (>=
1.0.0), SummarizedExperiment, S4Vectors, tmle
affxparser (>= 1.16.0), affy, graphics, Biobase
affyio (>= 1.13.3), BiocManager, graphics, grDevices, methods,
preprocessCore, stats, utils, zlibbioc
affy, limma, GOstats, gcrma, splines, xtable, AnnotationDbi,
ggplot2, gplots, oligoClasses, ReportingTools, hwriter,
lattice, S4Vectors, edgeR, RSQLite, BiocGenerics, DBI, Glimma
grDevices, graphics, stats, utils, tcltk, tkrplot, limma,
affy, affyio, affyPLM, gcrma, BiocGenerics, BiocManager,
R2HTML, xtable
rmarkdown, tools, methods, ggplot2, GGally, dplyr, rjson,
shiny, shinydashboard, DT, stats, utils, tximport (>= 1.11.5),
cowplot
Biostrings, IRanges, GenomicRanges, GenomicAlignments,
Rsamtools, SummarizedExperiment, GenomicFeatures, speedglm,
splines, graph, RBGL, stringr, stats, methods, graphics,
GenomeInfoDb, S4Vectors
stats, DBI, limma, lumi, agricolae, RMySQL, DESeq2,
SummarizedExperiment, gplots, gage, S4Vectors
assertthat, shiny, shinyjs, DESeq2, caret, plotly, ggplot2,
rentrez, reshape2, covr, ape, vegan, dplyr, magrittr,
MultiAssayExperiment, SummarizedExperiment, S4Vectors (>=
0.23.19), XML, forcats, scales, lattice, glmnet, tsne, DMwR,
plotROC, DT, reactable, utils, limma, methods, stats, tibble,
biomformat, umap, Matrix
Biobase, DBI, xtable, graphics, utils, stats, methods,
BiocGenerics (>= 0.13.8), RCurl
AnnotationDbi, AnnotationHub, dplyr, GenomicFeatures,
GenomicRanges, GenomeInfoDb (>= 1.10.3), ggplot2, IRanges,
methods, readr, regioneR, reshape2, rtracklayer, S4Vectors (>=
0.23.10), stats, utils
multtest,qvalue,limma,DESeq2,edgeR,RColorBrewer, grDevices,
graphics, stats, utils, SummarizedExperiment
emdbook, SummarizedExperiment, GenomicRanges, methods, stats,
utils, Rcpp
shiny, shinyjs, DT, VariantAnnotation, BSgenome,
BSgenome.Hsapiens.UCSC.hg19, TxDb.Hsapiens.UCSC.hg19.knownGene,
Homo.sapiens, SNPlocs.Hsapiens.dbSNP144.GRCh37,
XtraSNPlocs.Hsapiens.dbSNP144.GRCh37, rsnps, Biostrings,
MafDb.1Kgenomes.phase3.hs37d5, MafDb.ExAC.r1.0.hs37d5,
MafDb.ESP6500SI.V2.SSA137.hs37d5, MafDb.gnomADex.r2.1.hs37d5,
COSMIC.67, rentrez, PolyPhen.Hsapiens.dbSNP131,
SIFT.Hsapiens.dbSNP137, seqinr, openxlsx, Rsamtools, stringr,
utils, stats, GenomicRanges, S4Vectors, GenomicFeatures,
IRanges, GenomicScores, SummarizedExperiment
affy, affyPLM (>= 1.27.3), beadarray, Biobase, genefilter,
graphics, grDevices, grid, gridSVG (>= 1.4-3), Hmisc, hwriter,
lattice, latticeExtra, limma, methods, RColorBrewer, setRNG,
stats, utils, vsn (>= 3.23.3), XML, svglite
AnnotationDbi, biomaRt, bit64, circlize, cluster,
ComplexHeatmap, corrplot, data.table, dplyr, factoextra,
FactoMineR, getopt, ggdendro, ggplot2, gplots, ggrepel,
gProfileR, graphics, grDevices, grid, limma, MSstats, openxlsx,
org.Hs.eg.db, org.Mm.eg.db, PerformanceAnalytics, pheatmap,
plotly, plyr, RColorBrewer, scales, seqinr, stats, stringr,
tidyr, UpSetR, utils, VennDiagram, yaml
BSgenome, BiocFileCache, BiocParallel, Rcpp, data.table,
ggplot2, grDevices, graphics, grid, motifStack, rappdirs,
stats, testit, utils
Biobase, limma, cluster, GOstats, graphics, stats,
reactome.db, KEGGREST, org.Hs.eg.db, utils, methods
GenomicRanges (>= 1.17.25), IRanges (>= 1.99.22), S4Vectors
(>= 0.9.39), RColorBrewer, splines, sva, limma, rtracklayer (>=
1.29.25), Biobase (>= 2.25.0), GenomeInfoDb
ggplot2, stringr, XML, raster, dplyr, data.table, tidyr,
magrittr, DT, lazyeval, ShortRead
SummarizedExperiment, S4Vectors, BiocGenerics, Rcpp, stats,
methods, utils, BiocNeighbors, BiocSingular, Matrix,
DelayedArray, DelayedMatrixStats, scater, BiocParallel
Rcpp (>= 0.12.12), BB, foreach, iterators, doSNOW, Matrix,
parallel, MASS, locfit, fitdistrplus, stats, methods, graphics,
grDevices, SingleCellExperiment, SummarizedExperiment,
BiocParallel, utils
BeadDataPackR, limma, AnnotationDbi, stats4, reshape2,
GenomicRanges, IRanges, illuminaio, methods, ggplot2
stats, utils, GEOquery, graphics, BiocGenerics
shiny (>= 1.0.5), AlgDesign (>= 1.1.7.3), import (>= 1.1.0),
methods, shinythemes, Biobase, geNetClassifier,
AnnotationFuncs, org.Hs.eg.db, DOSE, clusterProfiler,
reactome.db, ReactomePA, DiagrammeR(>= 1.0.5), visNetwork,
htmlwidgets, plyr, tibble, DT (>= 0.12), dplyr (>= 0.8.5)
Biobase, graph (>= 1.9.26), methods, RBGL (>= 1.13.5), tools,
utils, XML, RCurl, RUnit, BiocManager
utils, XML, AnnotationDbi, progress, stringr, httr, openssl,
BiocFileCache, rappdirs
stats, methods, dplyr, tibble, ggplot2, ggsci, superheat,
assertthat, future, doFuture, tmle (>= 1.4.0.1), S4Vectors,
BiocGenerics, BiocParallel, SummarizedExperiment, limma
grDevices, stats, scales, Hmisc, RColorBrewer, dichromat,
BiocGenerics, S4Vectors (>= 0.23.19), IRanges (>= 1.99.28),
GenomeInfoDb (>= 1.5.14), GenomicRanges (>= 1.23.21),
SummarizedExperiment, Biostrings (>= 2.33.11), Rsamtools (>=
1.17.28), GenomicAlignments (>= 1.1.16), GenomicFeatures (>=
1.21.19), AnnotationDbi, VariantAnnotation (>= 1.11.4),
ensembldb (>= 1.99.13), AnnotationFilter (>= 0.99.8), rlang
readr, qualV, Matrix, impute, HDF5Array, S4Vectors, Rsamtools,
data.table, Biobase, GenomicRanges, BiocGenerics,
VariantAnnotation, DelayedMatrixStats, SummarizedExperiment,
GenomeInfoDb, Mus.musculus, Homo.sapiens, matrixStats,
rtracklayer, QDNAseq, dmrseq, methods, utils, R.utils, gtools
grid, stats, grDevices, utils, circlize, viridis,
RColorBrewer, ComplexHeatmap, SummarizedExperiment, pasilla
beadarray(>= 2.0.0), Biobase(>= 2.0.0), Rcpp (>= 0.12.8),
BiocGenerics, grDevices, stats, graphics
Rcpp (>= 0.12.12), IRanges, GenomeInfoDb, S4Vectors,
matrixStats, preprocessCore, sva, parallel, EBImage, utils
Biostrings (>= 2.52.0), BSgenome.Hsapiens.UCSC.hg19 (>=
1.4.0), bumphunter (>= 1.26.0), cowplot (>= 1.0.0), derfinder
(>= 1.18.1), derfinderPlot (>= 1.18.1), GenomicRanges (>=
1.36.0), ggplot2 (>= 3.1.1), RColorBrewer (>= 1.1), utils,
grDevices, GenomicState (>= 0.99.7)
plyr, kernlab, gbm, stringr, cowplot, ggplot2, biomaRt,
Biostrings, parallel, utils, stats,
BSgenome.Hsapiens.UCSC.hg38, rtracklayer, GenomicRanges,
GenomeInfoDb, IRanges, S4Vectors, data.table
methods, utils, grDevices, stats, S4Vectors, GenomeInfoDb (>=
1.12.3), IRanges, Rsamtools, GenomicAlignments, ggplot2,
BiocGenerics, gtools, doParallel, foreach
dplyr, Rcpp, tibble, stringr, magrittr, purrr, BiocParallel,
crayon, utils, tidyr, curl, xml2, grDevices, rlang,
BiocFileCache, rappdirs
IRanges (>= 2.11.16), GenomeInfoDb, scales, stats, graphics,
Biobase, locfit, gtools, data.table (>= 1.11.8), S4Vectors (>=
0.23.11), R.utils (>= 2.0.0), DelayedMatrixStats (>= 1.5.2),
permute, limma, DelayedArray (>= 0.9.8), Rcpp, BiocParallel,
BSgenome, Biostrings, utils, HDF5Array (>= 1.11.9), rhdf5
matrixStats, limma, doRNG, BiocGenerics, utils,
GenomicFeatures, AnnotationDbi, stats
biomaRt, cowplot, data.table, dplyr, fgsea, ggplot2, ggrepel,
graphics, httr, limma, methods, pbapply, R.utils, readxl,
reshape2, rhdf5, stats, tools, utils
GSEABase, tkrplot, geNetClassifier, RUnit, Formula, rpart,
survival, Biobase, phenoTest, circlize, plyr, graphics, stats,
utils, grDevices
BiocGenerics (>= 0.31.6), coda, EBarrays, gaga, gtools,
GenomeInfoDb, GenomicFeatures, limma, mgcv, Rsamtools,
rtracklayer, S4Vectors (>= 0.9.25), sqldf, survival, VGAM
AnnotationDbi, hwriter, GSEABase, Category (>= 2.33.1),
GOstats, annotate, colorspace, graph, RCy3 (>= 1.99.29),
methods, grDevices, utils
BiocFileCache, RColorBrewer, cgdsr, genefilter, gplots,
grDevices, stats, utils, xlsx
stats, S4Vectors, utils, methods, Matrix,
SummarizedExperiment, SingleCellExperiment, Rtsne, graphics,
grDevices, gtools, RColorBrewer, ape, Rmpi, irlba, Rcpp, Rdpack
(>= 0.7)
MAST, ggplot2, Matrix, dplyr, magrittr, stats, utils, rlang,
BiocGenerics, S4Vectors, readr, tibble, DelayedArray
stats, plyr, foreach, ggplot2, RColorBrewer, grid, scales,
gtable, grDevices, graphics, matrixStats, doParallel, digest,
gridExtra, methods, reshape2, MAST, S4Vectors, data.table,
Rcpp, RcppEigen, uwot, enrichR, stringi, SummarizedExperiment,
MCMCprecision, ggrepel, Rtsne, withr, dendextend, ggdendro,
pROC, magrittr
prada, GSEABase, Category, stats4, BiocGenerics
topicmodels, slam, maptpx, igraph, xtable, gplots
methods, jsonlite, httr, data.table, pbapply, tidyr, R.utils,
Rsamtools, BiocParallel, foreach, utils, parallel, doParallel
AnnotationDbi, e1071, ggplot2, graphics, grDevices, grid,
mvoutlier, org.Hs.eg.db, org.Mm.eg.db, robustbase, stats,
topGO, utils
BiocGenerics, S4Vectors, IRanges, GenomicRanges, Biobase
methods, grid, Rsamtools, GenomeInfoDb, GenomicAlignments,
RColorBrewer, graphics, AnnotationDbi, RCircos, org.Hs.eg.db,
org.Mm.eg.db, rmarkdown, graph, Rgraphviz, DT, plyr, dplyr,
BiocStyle, ArgumentCheck, gtools, magick
AnnotationDbi, BiocGenerics, methods, GenomicRanges,
GenomeInfoDb, IRanges, readr, rtracklayer, S4Vectors, utils
AnnotationDbi, BiocGenerics, chipenrich.data, GenomeInfoDb,
GenomicRanges, grDevices, grid, IRanges, lattice, latticeExtra,
MASS, methods, mgcv, org.Dm.eg.db, org.Dr.eg.db, org.Hs.eg.db,
org.Mm.eg.db, org.Rn.eg.db, parallel, plyr, rms, rtracklayer,
S4Vectors (>= 0.23.10), stats, stringr, utils
methods, stats, lattice, BiocGenerics, IRanges, GenomicRanges,
ShortRead
graphics, stats, utils, methods, survival
cluster, DPpackage, ICSNP, ellipse, vegan
IRanges, GenomeInfoDb, GenomicRanges, ggplot2, nabor,
BiocParallel, BiocGenerics, Biostrings, TFBSTools, Rsamtools,
S4Vectors, methods, Rcpp, grid, plotly, shiny, miniUI, stats,
utils, graphics, DT, Rtsne, Matrix, SummarizedExperiment,
RColorBrewer, BSgenome
methods, utils, grDevices, graphics, stats, foreach,
doParallel, BiocGenerics (>= 0.31.6), S4Vectors, GenomeInfoDb,
IRanges, reshape2, Rsamtools, GenomicAlignments, bamsignals,
mvtnorm
dplyr, magrittr, readr, rtracklayer, stringr, Biostrings,
BSgenome, stringi, DESeq2, edgeR, GenomicRanges, IRanges,
seqinr, R.utils, reshape2, ggplot2, utils, rlang, S4Vectors,
stats, AnnotationHub, GenomeInfoDb,
BSgenome.Hsapiens.UCSC.hg19,
BSgenome, GenomicRanges, seqinr, e1071, GenomeInfoDb, IRanges,
utils, BSgenome.Drerio.UCSC.danRer7
Rcpp (>= 0.12.15), xcms(>= 3.0.0), MSnbase, igraph, qlcMatrix,
matrixStats, methods
methods, NMF, RColorBrewer, ape (>= 5.0), cluster, stats,
limma, howmany, locfdr, matrixStats, graphics, parallel,
RSpectra, kernlab, stringr, S4Vectors, grDevices, DelayedArray
(>= 0.7.48), HDF5Array (>= 1.7.10), Matrix, Rcpp, edgeR,
scales, zinbwave, phylobase, pracma
AnnotationDbi, DOSE (>= 3.5.1), enrichplot (>= 0.99.7),
ggplot2, GO.db, GOSemSim, magrittr, methods, plyr, qvalue,
rvcheck, stats, tidyr, utils
BiocGenerics, Biobase, IRanges, Rsamtools, GenomeInfoDb,
S4Vectors, exomeCopy
colortools, hash,grDevices, gridExtra, rtracklayer, IRanges,
S4Vectors, GenomicRanges, stats, corrplot
methods, stats, utils, Biostrings, Biobase, dplyr, stringr,
purrr, ggplot2, data.table
affy, siggenes, GEOquery, vsn, igraph, acde, Biobase, limma,
graphics, stats, utils, STRINGdb, SummarizedExperiment, minet,
rmarkdown
methods, class, gplots, mclust, amap, apcluster, foreach,
parallel, doParallel, fastcluster, corrplot, biwt, Biobase,
reshape2, dplyr, devtools
grDevices, graphics, grid, stats, utils, ComplexHeatmap (>=
2.0.0), matrixStats, GetoptLong, circlize (>= 0.4.7),
GlobalOptions (>= 0.1.0), clue, parallel, RColorBrewer,
cluster, skmeans, png, mclust, crayon, methods, xml2,
microbenchmark, httr, knitr, markdown, digest, impute, brew,
Rcpp (>= 0.11.0), BiocGenerics, eulerr
airway, AnnotationDbi, BiocParallel, Biobase, Biostrings,
data.table, dendextend, DESeq2 (>= 1.20.0), EDASeq, ensembldb,
edgeR, EnsDb.Hsapiens.v86, GenomicAlignments, GenomicFeatures,
limma, org.Hs.eg.db, pcaMethods, RColorBrewer, Rsamtools,
RUVSeq, S4Vectors, stats, SummarizedExperiment,
TxDb.Dmelanogaster.UCSC.dm3.ensGene, utils
Biobase, GSVA, gdata, genefu, limma, matrixStats,
randomForest, stats, utils, methods
GenomeInfoDb, rtracklayer, stringr, S4Vectors, methods
matrixStats, gplots, grDevices, methods, graphics, stats,
utils
data.table, grDevices, clue, cluster, gplots, BiocGenerics (>=
0.31.6), S4Vectors, IRanges, GenomicRanges, Rcpp, TSP,
GenomicFiles, gtools, rtracklayer, BiocParallel, DNAcopy,
colorspace, reshape2, ggplot2, methods, exomeCopy,
GenomicAlignments, diagram
edgeR, DESeq2, capushe, Rmixmod, e1071, BiocParallel, ggplot2
(>= 2.1.0), scales, HTSFilter, corrplot, HTSCluster (>= 2.0.8),
grDevices, graphics, stats, methods, compositions, mvtnorm
rmarkdown (>= 0.9.5), edgeR, DESeq2 (>= 1.16.0), dplyr, tidyr,
ggplot2, grDevices, tools, SummarizedExperiment, genefilter,
DT, GenomeInfoDbData, caTools, randtests, stats, utils, methods
parallel, genefilter, grDevices, stats, graphics
DT, utils, GUIDEseq, GenomicRanges, GenomicFeatures,
BiocManager, BSgenome, AnnotationDbi, hash
methods, Biobase (>= 2.15.4), BiocGenerics, affyio (>=
1.23.2), illuminaio, ellipse, mvtnorm, splines, stats, SNPchip,
utils, lattice, ff, foreach, RcppEigen (>= 0.3.1.2.1),
matrixStats, VGAM, parallel, graphics, limma, beanplot
Rcpp, BiocGenerics, Rsamtools, edgeR, limma, GenomicFeatures,
AnnotationDbi, methods, S4Vectors, IRanges, GenomeInfoDb,
stats, BiocParallel, utils
ccaPP, ggplot2, limma, reshape2, shiny, stats, stringr, utils
methods, plyr, BiocGenerics, S4Vectors (>= 0.9.25), Biobase
magrittr, methods, S4Vectors, tidyr, utils
AnnotationHub, ExperimentHub, HDF5Array, S4Vectors, stats,
SummarizedExperiment, utils
S4Vectors (>= 0.9.25), DBI, GenomeInfoDb, GenomicRanges,
Rsamtools (>= 1.10.2), GenomicAlignments, Biostrings (>=
2.26.3), GenomicFeatures (>= 1.32.0), stringr, RCurl, plyr,
VariantAnnotation (>= 1.13.44), rtracklayer, RSQLite,
AhoCorasickTrie, methods
viridis, methods, shiny, graphics, stats, grDevices, utils,
BiocGenerics, S4Vectors, flowCore, Biobase, Rcpp,
BiocNeighbors, SummarizedExperiment
flowCore, ggplot2, ggridges, RColorBrewer, reshape2, stats,
grDevices, Rdpack, methods, grid, FlowSOM
pheatmap, Biostrings, UniProt.ws, BiocGenerics, utils
igraph, foreach, plyr, stringr, reshape2, methods, Matrix,
graphics, stats, RColorBrewer, circlize, doRNG
Biobase (>= 1.10.0), RColorBrewer (>= 0.1-3), xtable, lattice,
BiocGenerics
plotrix, clue, parallel, ggplot2, openxlsx, R.utils, flowCore,
flowDensity (>= 1.13.3), SamSPECTRAL, flowPeaks
shiny, jsonlite, shinyjs, shinydashboard, shinyBS, gplots, DT,
ggplot2, RColorBrewer, annotate, AnnotationDbi, DESeq2, DOSE,
igraph, grDevices, graphics, stats, utils, GenomicRanges,
IRanges, S4Vectors, SummarizedExperiment, stringi, reshape2,
d3heatmap, org.Hs.eg.db, org.Mm.eg.db, limma, edgeR,
clusterProfiler, methods, sva, RCurl, enrichplot, colourpicker,
plotly, heatmaply, Harman, pathview
stats, methods, ggplot2, foreign, graphics, BiocStyle,
Biobase, cluster, gplots, RColorBrewer, locfit, made4, ade4,
sfsmisc, scatterplot3d, gdata, grDevices, utils, reshape2,
gridExtra
methods, Matrix, quadprog(>= 1.5-5), vcfR, GenomicRanges,
stats, GenomicFeatures, Biostrings, BiocGenerics, S4Vectors,
plyr, utils, graphics, BSgenome.Hsapiens.UCSC.hg19,
TxDb.Hsapiens.UCSC.hg19.knownGene, VariantAnnotation,
SummarizedExperiment, ggseqlogo, gridExtra, data.table
IRanges, GenomicRanges, SummarizedExperiment, ggplot2, DESeq2
IRanges (>= 1.99.27), Matrix, methods, S4Vectors (>= 0.2.2)
derfinder (>= 1.1.0), GenomeInfoDb (>= 1.3.3),
GenomicFeatures, GenomicRanges (>= 1.17.40), ggbio (>=
1.13.13), ggplot2, graphics, grDevices, IRanges (>= 1.99.28),
limma, methods, plyr, RColorBrewer, reshape2, S4Vectors (>=
0.9.38), scales, utils
BiocGenerics (>= 0.25.1), AnnotationDbi (>= 1.27.9),
BiocParallel (>= 1.15.15), bumphunter (>= 1.9.2),
derfinderHelper (>= 1.1.0), GenomeInfoDb (>= 1.3.3),
GenomicAlignments, GenomicFeatures, GenomicFiles, GenomicRanges
(>= 1.17.40), Hmisc, IRanges (>= 2.3.23), methods, qvalue (>=
1.99.0), Rsamtools (>= 1.25.0), rtracklayer, S4Vectors (>=
0.23.19), stats
methods, graphics, grDevices, utils, stats, Matrix, Rcpp (>=
0.10.3), RcppEigen, RSpectra (>= 0.14-0), irlba, pcaMethods,
Biobase, BiocGenerics, SummarizedExperiment,
SingleCellExperiment, ggplot2, ggplot.multistats, tidyr,
tidyselect, ggthemes, VIM, knn.covertree, proxy, RcppHNSW,
smoother, scales, scatterplot3d
Rsamtools, Rhtslib, Biostrings, BSgenome, rhdf5, edgeR, limma,
csaw, locfit, methods, IRanges, S4Vectors, GenomeInfoDb,
BiocGenerics, grDevices, graphics, stats, utils, Rcpp,
rtracklayer
stats, DiffCorr, psych, igraph, BiocGenerics
flowCore, FlowSOM, SummarizedExperiment, S4Vectors, limma,
edgeR, lme4, multcomp, dplyr, tidyr, reshape2, magrittr, stats,
methods, utils, grDevices, graphics, ComplexHeatmap, circlize,
grid
methods, GenomicRanges, foreach, plyr, dplyr, reshape2,
ggplot2, matrixStats, Sushi, edgeR, locfit, statmod, biomaRt,
GenomeInfoDb, S4Vectors, IRanges, grDevices, graphics, stats,
utils, Biobase, readr, data.table, rtracklayer, pbapply, limma
grDevices, stats, methods, Matrix, MASS, expm, igraph, Rcpp,
RcppArmadillo, RcppParallel, plyr, precrec
Biobase, stats, biwt, gtools, MASS, tools
GenomicRanges, nlme, ggplot2, S4Vectors, RColorBrewer,
bumphunter, DelayedMatrixStats (>= 1.1.13), matrixStats,
BiocParallel, outliers, methods, locfit, IRanges, grDevices,
graphics, stats, utils, annotatr, AnnotationHub, rtracklayer,
GenomeInfoDb, splines
sva, impute, digest, mnormt, methods, grDevices, graphics,
stats, SummarizedExperiment, utils
edgeR, methods, stats, graphics, matrixStats, mclust, lme4,
RUnit, SummarizedExperiment, digest, S4Vectors
ggplot2, httr, dplyr, readr, stringr, tidyr
Biobase (>= 2.44.0), BiocFileCache (>= 1.7.10), BiocGenerics
(>= 0.30.0), BiocParallel (>= 1.18.1), biomaRt (>= 2.40.5),
Biostrings (>= 2.52.0), DESeq (>= 1.36.0), edgeR (>= 3.26.8),
GenomeInfoDb (>= 1.20.0), genomeIntervals (>= 1.40.0),
GenomicAlignments (>= 1.20.1), GenomicRanges (>= 1.36.1),
SummarizedExperiment (>= 1.14.1), graphics, IRanges (>=
2.18.3), LSD (>= 4.0), locfit, methods, parallel, rappdirs (>=
0.3.1), Rsamtools (>= 2.0.3), S4Vectors (>= 0.22.1), ShortRead
(>= 1.42.0), utils
graphics, stats, utils, methods, locfit, Rcpp
methods, splines, sva, snm, jackstraw, qvalue(>= 1.99.0), MASS
R.utils, gplots, sna, wordcloud, igraph, pheatmap, edgeR,
DESeq2, clusterProfiler, S4Vectors, ggplot2, org.Hs.eg.db,
org.Mm.eg.db, limma, DOSE, AnnotationDbi
snow, tools, snowfall, RUnit, methods, ChemmineR, RCurl,
digest, BiocGenerics, gespeR,RcppAnnoy (>= 0.0.9)
BSgenome, rtracklayer, motifmatchr, TFBSTools, R.utils,
methods, JASPAR2018, GenomeInfoDb, GenomicRanges, IRanges,
BiocGenerics, S4Vectors, utils, parallel, stats, ggpubr,
heatmap3, ggplot2, clusterProfiler, rmarkdown, grDevices,
magrittr
AnnotationDbi, cowplot, DOSE (>= 3.5.1), europepmc, ggplot2,
ggplotify, ggraph, ggridges, GOSemSim, graphics, grDevices,
grid, gridExtra, igraph, methods, purrr, RColorBrewer,
reshape2, stats, utils
S4Vectors (>= 0.9.25), Biostrings, SummarizedExperiment,
GenomeInfoDb, stats
methods, RSQLite (>= 1.1), DBI, Biobase, GenomeInfoDb,
AnnotationDbi (>= 1.31.19), rtracklayer, S4Vectors (>=
0.23.10), Rsamtools, IRanges (>= 2.13.24), ProtGenerics,
Biostrings (>= 2.47.9), curl
BoolNet, e1071, gtools, stats, igraph, nem, utils, lattice,
latticeExtra, RColorBrewer, pcalg, minet, grDevices, graph
BiocGenerics, MCMCpack, Rsamtools, parallel, GenomeInfoDb,
beadarray
data.table, doParallel, EntropyExplorer, graphics, stats,
grDevices, pheatmap, utils, qvalue, WGCNA, ReactomePA
epivizrData (>= 1.5.1), epivizrServer, htmltools, rjson,
methods, BiocGenerics
S4Vectors, GenomicRanges, SummarizedExperiment (>= 0.2.0),
OrganismDbi, GenomicFeatures, GenomeInfoDb, IRanges, ensembldb
git2r, epivizrServer, GenomeInfoDb, BiocGenerics,
GenomicFeatures, S4Vectors
epivizrServer (>= 1.1.1), epivizrData (>= 1.3.4),
GenomicRanges, S4Vectors, IRanges
edgeR, gplots, grid, gtools, limma, locfit, MASS, plyr,
qvalue, reshape2, ROCR, scales, stringr
rtracklayer (>= 1.38.1), S4Vectors (>= 0.23.18), BiocGenerics,
GenomicRanges, SummarizedExperiment, ggplot2, GenomeInfoDb,
Biobase, shiny, BiocParallel, IRanges, AnnotationDbi
Rcpp (>= 0.12.11), methods, knitr, Rbowtie2, rtracklayer,
ggplot2, Biostrings, ChIPseeker, clusterProfiler, igraph,
rJava, DiagrammeR, magrittr, digest, BSgenome, AnnotationDbi,
GenomicFeatures, R.utils, GenomeInfoDb, BiocGenerics,
S4Vectors, IRanges, rmarkdown, tools, VennDiagram, grid,
JASPAR2016, TFBSTools, grDevices, graphics, stats, utils,
parallel, corrplot, BiocManager, motifmatchr
mpm, hexbin, Rtsne, MLP, grid, Biobase, MASS, stats, utils,
grDevices, methods
corrplot (>= 0.84), grDevices, graphics, reshape2, ggplot2,
ggdendro, plotrix, stats, matrixStats, Rdpack
fda, RColorBrewer, genomation, ggplot2, ComplexHeatmap,
grDevices, stats, utils
methods, graphics, stats, BiocGenerics, S4Vectors, IRanges
stats, plyr, VariantAnnotation, SummarizedExperiment,
rtracklayer, GenomicRanges, methods, IRanges
FCBF, parallel, progress, dplyr, ggplot2, ggrepel, igraph,
grid, intergraph, stringr, clusterProfiler, data.table,
grDevices, methods, network, scales, sna, utils, stats,
SingleCellExperiment, pathwayPCA
data.table, BiocParallel, stats, ggplot2 (>= 2.2.0),
gridExtra, grid, fastmatch, Matrix, utils
graphics, stats, utils, methods, abind, gtools, qvalue,
S4Vectors, SummarizedExperiment, matrixStats, svMisc, Rcpp
ggplot2, flowCore, plyr, changepoint, knitr, reshape2,
RColorBrewer, scales, methods, graphics, stats, utils,
rmarkdown
BiocGenerics, methods, Biobase, graph, ellipse, flowViz,
flowCore, clue, corpcor, mnormt, parallel
Biobase, BiocGenerics (>= 0.29.2), grDevices, graphics,
methods, stats, utils, stats4, Rcpp, matrixStats
flowCore, graphics, flowViz (>= 1.46.1), car, sp, rgeos,
gplots, RFOC, flowWorkspace (>= 3.33.1), methods, stats,
grDevices
flowCore, car, caTools, knitr, rmarkdown, minpack.lm, shiny,
methods, graphics, stats, utils
FlowSOM, Rtsne, ggplot2, destiny, gmodels, flowUtils, Biobase,
Matrix, flowCore, sva, matrixStats, methods, mclust, prettydoc,
RANN(>= 2.5), Rcpp (>= 0.12.0), BiocNeighbors, cluster,
pheatmap, scatterpie, umap, scatterplot3d, limma, stringr,
grDevices, grid, stats
BiocGenerics, MASS, flowCore (>= 1.51.6), flowWorkspace,
ncdfFlow(>= 2.19.5), flowViz, fda (>= 2.2.6), Biobase, methods,
grDevices, graphics, stats, cluster, utils, KernSmooth,
lattice, ks, RColorBrewer, rrcov
Biobase, graph, methods, stats, utils, corpcor, RUnit, XML,
flowCore (>= 1.32.0)
Biobase, BiocGenerics, graph, graphics, grDevices, lattice,
methods, stats, stats4, utils, RBGL, tools, gridExtra,
Rgraphviz, data.table, dplyr, latticeExtra, Rcpp, RColorBrewer,
stringr, scales, flowViz, matrixStats, digest, RcppParallel,
flowCore(>= 1.51.4), ncdfFlow(>= 2.31.1)
colorRamps, abind, BiocParallel, graphics, stats, utils,
plotly, shiny
RUnit, methods, ChemmineR, BiocGenerics, parallel
pls, matrixStats, minfi, methods,
IlluminaHumanMethylation450kmanifest,
IlluminaHumanMethylation450kanno.ilmn12.hg19, GenomeInfoDb,
grDevices, graphics, stats
brew, BiocGenerics, annotate, AnnotationDbi, graphics,
grDevices, GSEABase, hwriter, parallel, stats, utils, yaml
Biobase, methods, GSEAlm, Category, Matrix (>= 1.0.9),
parallel, annotate, genefilter, AnnotationDbi, DESeq,
grDevices, graphics, stats, utils, bigmemory, bigmemoryExtras
(>= 1.1.2)
Biobase, limma, RobustRankAggreg, ggplot2, PANTHER.db,
rmarkdown, grDevices, graphics, stats, utils, parallel
GenomicRanges, methods, BatchJobs, BBmisc, S4Vectors,
BiocGenerics, foreach, doParallel, bit, ff, rtracklayer,
ffbase, GenomicFiles, SummarizedExperiment
methods, snpStats, BiocGenerics, S4Vectors (>= 0.9.25),
IRanges, GenomeInfoDb, GenomicFiles, GenomicRanges,
SummarizedExperiment, VariantAnnotation, Biobase, BatchJobs,
gQTLBase, limma, mgcv, dplyr, AnnotationDbi, GenomicFeatures,
ggplot2, reshape2, doParallel, foreach, ffbase, BBmisc,
beeswarm, HardyWeinberg, graphics, stats, utils, shiny, plotly,
erma, ggbeeswarm
BiocGenerics, GenomeInfoDb, S4Vectors, IRanges, Biostrings,
BSgenome, GenomicRanges, Rsamtools, GenomicAlignments,
matrixStats, MASS, splines, grDevices, graphics, stats, methods
Biobase, affy (>= 1.23.2), affyio (>= 1.13.3), XVector,
Biostrings (>= 2.11.32), splines, BiocManager
MASS, hypergea (>= 1.3.0), gplots, Rcpp (>= 0.11.3), graphics,
stats, utils
dplyr, grDevices, ggplot2, magrittr, mixtools, scales,
pbmcapply, parallel, stats, utils
BiocGenerics, IRanges (>= 2.13.15), GenomicRanges (>=
1.31.10), GenomicFeatures (>= 1.31.5), Biostrings,
VariantAnnotation, rtracklayer, S4Vectors (>= 0.17.28),
GenomeInfoDb, Biobase
utils, GenomicRanges, org.Hs.eg.db, BiocGenerics,
GenomeInfoDb, GenomicFeatures, IRanges, rtracklayer
utils, methods, stats, Biobase, BiocGenerics
data.table, dplyr, graphics, networkD3, RColorBrewer,
SnowballC, tm, utils, wordcloud, AnnotationDbi, BiocStyle,
org.Rn.eg.db
BiocGenerics (>= 0.31.2), AnnotationDbi, annotate, Biobase,
graphics, methods, stats, survival
igraph, snow, ape, grDevices, graphics, stats, utils,
data.table
Biostrings (>= 2.47.6), BSgenome (>= 1.47.3), data.table,
GenomeInfoDb, GenomicRanges (>= 1.31.8), GenomicAlignments (>=
1.15.6), S4Vectors (>= 0.17.25), ggplot2, gridBase, impute,
IRanges (>= 2.13.12), matrixStats, methods, parallel, plotrix,
plyr, readr, reshape2, Rsamtools (>= 1.31.2), seqPattern,
rtracklayer (>= 1.39.7), RUnit, Rcpp (>= 0.12.14)
S4Vectors (>= 0.23.18), GenomeInfoDb (>= 1.1.3), IRanges (>=
2.5.12), methods, graphics
ggplot2, rtracklayer, BiocGenerics, GenomicRanges,
GenomeInfoDb, IRanges, methods, BiocParallel, graphics, stats
rstan (>= 2.17.3), ranger, parallel, foreach, doParallel,
e1071, Biostrings, rPref
repo (>= 2.1.1), foreach, stats, utils, GSEABase, methods,
Biobase, XML, rhdf5, digest, iterators
Matrix, glmnet, cellHTS2, Biobase, biomaRt, doParallel,
parallel, foreach, reshape2, dplyr
grid, grDevices, graphics, stats, utils, gridExtra, scales,
reshape2, gtable, Hmisc, biovizBase (>= 1.29.2), Biobase,
S4Vectors (>= 0.13.13), IRanges (>= 2.11.16), GenomeInfoDb (>=
1.1.3), GenomicRanges (>= 1.29.14), SummarizedExperiment,
Biostrings, Rsamtools (>= 1.17.28), GenomicAlignments (>=
1.1.16), BSgenome, VariantAnnotation (>= 1.11.4), rtracklayer
(>= 1.25.16), GenomicFeatures (>= 1.29.11), OrganismDbi,
GGally, ensembldb (>= 1.99.13), AnnotationDbi,
AnnotationFilter, rlang
plyr, scales, data.table, RColorBrewer, gridExtra, rlang
ape, dplyr, ggplot2 (>= 3.0.0), grid, magrittr, methods,
purrr, rlang, rvcheck, tidyr, tidytree (>= 0.2.6), treeio (>=
1.8.0), utils
methods, Biobase, Biostrings (>= 2.47.6), graphics, grDevices,
stats, utils, IRanges (>= 2.13.12)
SummarizedExperiment, STRINGdb, biomaRt, futile.logger,
sparsebn, sparsebnUtils, forcats, dplyr, readr, ggplot2,
survminer, reshape2, stats, stringr, rlang, parallel, methods,
loose.rock (>= 1.0.12)
S4Vectors (>= 0.17.25), IRanges (>= 2.13.12), BiocGenerics (>=
0.25.1), rtracklayer (>= 1.39.7), GenomicFeatures (>= 1.31.3),
Biostrings, VariantAnnotation (>= 1.25.11), tools, Biobase,
BSgenome, GenomicAlignments (>= 1.15.6), BiocParallel
AnnotationDbi, biomaRt, GO.db, graphics, memoise, stats, utils
igraph, biomaRt, Rcpp, data.table, OrganismDbi, AnnotationDbi,
grDevices, stats, utils, GenomicRanges, IRanges
Matrix, Rcpp, stats, ggplot2, methods, cowplot, matrixStats
AnnotationDbi, checkmate, graph, httr, rappdirs, stats, utils
methods, utils, stats, GenomeInfoDb, AnnotationHub, digest
SummarizedExperiment, nloptr, fGarch, methods, BiocParallel,
graphics
circlize (>= 0.3.3), GetoptLong, grDevices, utils
methods, BiocGenerics, S4Vectors (>= 0.9.25), IRanges,
GenomeInfoDb, GenomicRanges (>= 1.29.6), GenomicFeatures,
Biostrings, Rsamtools, rtracklayer, AnnotationDbi, utils
GWASTools, survival, VariantAnnotation, parallel, matrixStats,
SummarizedExperiment, stats, utils, SNPRelate
rhdf5, reshape, S4Vectors, IRanges, Biostrings, Rsamtools (>=
1.99.1), methods, GenomicRanges, abind, BiocParallel,
BatchJobs, h5vcData, GenomeInfoDb
methods, grDevices, graphics, stats, Biostrings,
GenomicRanges, IRanges, KernSmooth, plotrix, Matrix, EBImage,
RColorBrewer, BiocGenerics, GenomeInfoDb
foreach, iterators, rtracklayer, dplyr, BSgenome, ggplot2,
scales, methods
sonicLength, dplyr, BiocGenerics, GenomicRanges, readxl,
methods
coin, stats, limma, grDevices, utils, graphics,
preprocessCore, servr, DelayedArray, matrixStats, methods,
S4Vectors
ggplot2, ggforce, DT, R6, magrittr, dplyr, purrr, stats,
scales, rlang, openxlsx, msigdbr, kableExtra, rmarkdown, gh,
igraph, visNetwork
fields, ggplot2, truncnorm, tidyr, data.table, dplyr,
grDevices, graphics, stats, utils, rlang
shiny (>= 0.9.1.9008), shinydashboard, shinyBS, reshape2,
ggplot2 (>= 2.0.0), scales, ROCR, dplyr, DT, limma, methods,
UpSetR
stats, graphics, preprocessCore, grDevices, randomForest,
affy, limma, parallel, GeneSelectMMD, rgl, MASS, lmtest,
scatterplot3d, utils
methods, BiocGenerics, S4Vectors, utils, stats, shiny,
shinydashboard, shinyAce, shinyjs, DT, rintrojs, ggplot2,
colourpicker, igraph, vipor, mgcv, reshape2, rentrez,
AnnotationDbi, graphics, grDevices, viridisLite, cowplot,
scales, dplyr
irlba, stats, cluster, graphics, SummarizedExperiment,
BiocParallel
stats, utils, methods, graphics, grDevices, ggplot2,
GenomicFeatures, ShortRead, BiocParallel, Biostrings,
S4Vectors, Rsamtools, BiocGenerics, IRanges, GenomicAlignments,
GenomicRanges, rtracklayer, SummarizedExperiment,
VariantAnnotation, limma, edgeR, csaw, DESeq2,
TxDb.Dmelanogaster.UCSC.dm6.ensGene
DESeq2, SummarizedExperiment, GenomicRanges, IRanges,
S4Vectors, ggplot2 (>= 2.0.0), d3heatmap, pheatmap,
pcaExplorer, IHW, gplots, UpSetR, goseq, stringr, dplyr, limma,
GOstats, GO.db, AnnotationDbi, shiny (>= 0.12.0),
shinydashboard, shinyBS, DT, rentrez, rintrojs, ggrepel, knitr,
rmarkdown, shinyAce, BiocParallel, grDevices, base64enc,
methods
dplyr (>= 0.7.6), futile.logger (>= 1.4.3), GenomeInfoDb (>=
1.14.0), GenomicRanges (>= 1.30), ggplot2 (>= 3.1.1),
grDevices, idr (>= 1.2), IRanges (>= 2.18.0), magrittr (>=
1.5), methods, reticulate (>= 1.13), scales (>= 1.0.0), stats,
stringr (>= 1.3.1), utils
methods, BiocGenerics, httpuv, utils, MotifDb, seqLogo,
rtracklayer, VariantAnnotation, randomcoloR
graphics, grDevices, RColorBrewer, gplots, futile.logger,
stats, utils, methods, ape, Matrix, fastcluster, dplyr,
HiddenMarkov, ggplot2, edgeR, coin, caTools, digest, reshape,
rjags, fitdistrplus, future, foreach, doParallel, BiocGenerics,
SummarizedExperiment, SingleCellExperiment, tidyr, parallel,
coda, gridExtra, argparse
interactiveDisplayBase (>= 1.7.3), shiny, RColorBrewer,
ggplot2, reshape2, plyr, gridSVG, XML, Category, AnnotationDbi
Biostrings, GenomicRanges, RSQLite, DBI, IRanges, stats,
assertthat
AnnotationDbi, assertive.sets, BiocGenerics, Biobase, broom,
cluster, cowplot, DEGreport, DESeq2, IRanges, dplyr,
GenomicRanges, gplots, ggplot2, gtools, gridExtra, grid,
grDevices, graphics, GGally, limma, methods, RColorBrewer,
readr, reshape, rlang, stats, stringr, S4Vectors, tidyr, tibble
magrittr, graphics, utils, GenomicRanges, SummarizedExperiment
shiny, survival, survminer, hwriter, plotly, ggplot2,
S4Vectors, graphics, stats, utils, UpSetR
regioneR, GenomicRanges, IRanges, Rsamtools, stats, graphics,
memoise, rtracklayer, GenomeInfoDb, S4Vectors, biovizBase,
digest, bezier, GenomicFeatures, bamsignals, AnnotationDbi,
grDevices, VariantAnnotation
methods, stats, Rcpp (>= 0.11.2), Matrix, XVector (>= 0.7.3),
S4Vectors (>= 0.5.11), e1071, LiblineaR, graphics, grDevices,
utils, apcluster
aod, Biobase, DESeq2, DSS, ggplot2, gplots, graphics,
grDevices, matrixStats, stats, utils, foreach, doParallel,
parallel
Matrix, snpStats, VariantAnnotation, GenomeInfoDb, httr,
BiocGenerics, ensembldb, EnsDb.Hsapiens.v75, Rsamtools,
GenomicFiles (>= 1.13.6), BiocGenerics (>= 0.25.1)
methods, grDevices, graphics, limma, R2HTML, tcltk, tkrplot,
xtable, utils
methods, stats, utils, data.table, S4Vectors, rlang, dplyr,
tidyr, forcats, ggplot2, limma, fgsea, ropls, magrittr
pheatmap, wordcloud, RColorBrewer, data.table, methods,
grDevices, stats, graphics, GenomicRanges, BiocParallel,
S4Vectors
affy (>= 1.23.4), methylumi (>= 2.3.2), GenomicFeatures,
GenomicRanges, annotate, lattice, mgcv (>= 1.4-0), nleqslv,
KernSmooth, preprocessCore, RSQLite, DBI, AnnotationDbi, MASS,
graphics, stats, stats4, methods
biomaRt, fgsea, GenomicFeatures, GenomicRanges, ggplot2,
graphics, grDevices, Gviz, IRanges, limma, parallel, S4Vectors,
stats, SummarizedExperiment, utils
Biobase, graphics, grDevices, venn, mclust, stats, MASS
data.table, RColorBrewer, methods, wordcloud, grDevices,
survival
dplyr, rtracklayer, reshape2, Gviz, DT, GenomeInfoDb, stats,
utils, IRanges, methods, BiocGenerics, parallel, data.table
BiocGenerics, ProtGenerics, digest, irlba, utils
methods, DelayedArray, Rcpp, SingleCellExperiment,
SummarizedExperiment, ClusterR, benchmarkme, Matrix
AnnotationDbi, DOSE (>= 3.5.1), enrichplot, GOSemSim (>=
1.99.3), MeSH.db, methods, rvcheck, utils
methods, stats, utils, fdrtool, MeSH.db, MeSH.AOR.db,
MeSH.PCR.db, MeSHDbi, MeSH.Hsa.eg.db, MeSH.Aca.eg.db,
MeSH.Bsu.168.eg.db, MeSH.Syn.eg.db, cummeRbund, org.Hs.eg.db,
Category, S4Vectors, BiocGenerics, RSQLite
optimx, Formula, plyr, multtest, BiocParallel, ggplot2
rtracklayer, tools, GenomicAlignments, GenomeInfoDb, IRanges,
ggplot2, Rsamtools, DBChIP, purrr, data.table, methods, dplyr,
magrittr
rtracklayer, gplots, tools, GenomicAlignments, GenomeInfoDb,
GenomicFeatures, IRanges, ggplot2, muStat, Rsamtools, DBChIP,
matrixStats, purrr, data.table, magrittr, methods, utils,
ensembldb, EnsDb.Hsapiens.v86, stringr
parallel, matrixStats, foreach, Matrix, gplots, graphics,
grDevices, stats, utils, Wrench, IHW
epivizr, epivizrData, epivizrServer, epivizrStandalone, vegan,
GenomeInfoDb, phyloseq, httr
methylKit, GenomicRanges, GenomeInfoDb, parallel,
BiocGenerics, S4Vectors, methods, stats, IRanges, msm
Rcpp (>= 0.12.4.5), methods, utils, grDevices, stats,
GenomeInfoDb, IRanges, Biostrings, reshape2, minpack.lm,
data.table
DelayedArray, HDF5Array, BSgenome, rjson, DelayedMatrixStats,
parallel, methods, ggplot2, matrixStats, graphics, stats, utils
grDevices, stats, utils, lumi, methylumi, Gviz, genoset,
SummarizedExperiment, IRanges, GenomicRanges,
VariantAnnotation, rtracklayer, GenomicFeatures, annotate,
Biobase (>= 2.5.5), AnnotationDbi, genefilter, biomaRt,
methods, parallel
Biobase, GenomicRanges, IRanges, S4Vectors, dplyr, magrittr,
minfi, bsseq, quadprog, plyranges, stats, utils, bumphunter,
genefilter, methods, IlluminaHumanMethylation450kmanifest,
IlluminaHumanMethylation450kanno.ilmn12.hg19
RobustRankAggreg, ggplot2, stringr, stats, clusterProfiler,
missMethyl, org.Hs.eg.db, reactome.db, BiocParallel, GO.db,
AnnotationDbi, shiny,
IlluminaHumanMethylation450kanno.ilmn12.hg19,
IlluminaHumanMethylationEPICanno.ilm10b4.hg19
methylKit, BiocParallel, GenomicRanges, IRanges, S4Vectors,
methods, parallel, ggplot2, gridExtra, rebus
IRanges, data.table (>= 1.9.6), parallel, S4Vectors (>=
0.13.13), GenomeInfoDb, KernSmooth, qvalue, emdbook, Rsamtools,
gtools, fastseg, rtracklayer, mclust, mgcv, Rcpp, R.utils,
limma, grDevices, graphics, stats, utils
BiocGenerics, S4Vectors, IRanges, GenomeInfoDb, GenomicRanges,
SummarizedExperiment, Biobase, graphics, lattice, annotate,
genefilter, AnnotationDbi, minfi, stats4, illuminaio
stats, cluster, methods, ggplot2, ggsci, gridExtra, superheat,
dplyr, gtools, tmle (>= 1.4.0.1), future, doFuture, S4Vectors,
BiocGenerics, BiocParallel, SummarizedExperiment, GenomeInfoDb,
bumphunter, IRanges, limma, minfi
methods, stats, ggplot2, Rcpp, dplyr, ggmcmc, MCMCpack,
MCMCglmm, coda, magrittr, tibble, Biobase
AnnotationDbi, DBI, RSQLite, methods, gtools
methods, stats, utils, RCurl, httr, stringr, Hmisc, energy,
entropy, Roleswitch, gplots, glmnet, impute, limma,
pcalg,TCGAbiolinks,dplyr,SummarizedExperiment, ctc,
heatmap.plus, InvariantCausalPrediction, Category, GOstats,
org.Hs.eg.db
WGCNA, flashClust, dynamicTreeCut, GFA, igraph, linkcomm, MCL,
NMF, biclust, runibic, iBBiG, fabia, BicARE, isa2, s4vd,
BiBitR, rqubic, Biobase, PMA, stats, dbscan, subspace, mclust,
SOMbrero, ppclust, miRspongeR, Rcpp, utils,
SummarizedExperiment, GSEABase, org.Hs.eg.db,
MatrixCorrelation, energy
utils, methods, graphics, KernSmooth, stats
corpcor, parallel, igraph, MCL, clusterProfiler, ReactomePA,
DOSE, survival, grDevices, graphics, stats, varhandle,
linkcomm, utils, Rcpp, org.Hs.eg.db
graphics, ggplot2, MASS, tmvtnorm, Matrix, mvtnorm, pbapply,
stats
dplyr, reshape2, Rtsne, scales, stats, tidyr, utils, vegan
BiocGenerics, S4Vectors, preprocessCore, grDevices, methods,
grid, gtable, scales, DBI, affy, affyPLM, oligo, oligoClasses
S4Vectors, GenomeInfoDb, Biobase (>= 2.33.2), IRanges,
beanplot, RColorBrewer, lattice, nor1mix, siggenes, limma,
preprocessCore, illuminaio (>= 0.23.2), DelayedMatrixStats (>=
1.3.4), mclust, genefilter, nlme, reshape, MASS, quadprog,
data.table, GEOquery, stats, grDevices, graphics, utils,
DelayedArray (>= 0.9.8), HDF5Array, BiocParallel
graph,ROntoTools, ggplot2, org.Hs.eg.db, AnnotationDbi,
Rgraphviz
limma, minfi, methylumi, IlluminaHumanMethylation450kmanifest,
statmod, ruv, stringr,
IlluminaHumanMethylation450kanno.ilmn12.hg19, org.Hs.eg.db,
AnnotationDbi, BiasedUrn, GO.db,
IlluminaHumanMethylationEPICmanifest,
IlluminaHumanMethylationEPICanno.ilm10b4.hg19
igraph, ellipse, corpcor, RColorBrewer, parallel, dplyr,
tidyr, reshape2, methods, matrixStats, rARPACK, gridExtra,
grDevices, graphics, stats, utils
rstan (>= 2.17.3),rstantools (>=
1.5.0),MASS,Matrix,stats4,ggplot2
cluster, nem, epiNEM, graph, Rgraphviz, flexclust, lattice,
naturalsort, snowfall, stats4, tsne, methods, graphics, stats,
utils, Linnorm, data.table, Rcpp, RcppEigen, matrixStats,
grDevices
methods, graphite, genefilter, BiocGenerics, gplots, GSEABase,
Biobase, parallel, corpcor, svd, cluster, grDevices, graphics,
stats, utils
parallel, igraph (>= 1.0.1), BiocGenerics, HSMMSingleCell (>=
0.101.5), plyr, cluster, combinat, fastICA, grid, irlba (>=
2.0.0), matrixStats, densityClust (>= 0.3), Rtsne, MASS,
reshape2, limma, tibble, dplyr, qlcMatrix, pheatmap, stringr,
proxy, slam, viridis, stats, biocViews, RANN(>= 2.5), Rcpp (>=
0.12.0)
MASS, splines, lattice, IRanges, GenomicRanges,
GenomicAlignments, Rsamtools, GenomeInfoDb, S4Vectors
XML, scales, htmlwidgets,grDevices, stats, stats4, graphics,
utils, ggplot2
methods, compiler, grDevices, grImport, stringr, BiocGenerics,
S4Vectors (>= 0.9.25), IRanges, GenomeInfoDb, GenomicRanges,
Biostrings, BSgenome, rtracklayer, VariantAnnotation,
BiocParallel, motifStack, Gviz, matrixStats, TFMPvalue,
SummarizedExperiment
Matrix, Rcpp, methods, TFBSTools, Biostrings, BSgenome,
S4Vectors, SummarizedExperiment, GenomicRanges, IRanges,
Rsamtools, GenomeInfoDb
S4Vectors, scales, stats, graphics, statmod
plyr, dplyr, dbplyr, magrittr, foreach, parallel, doSNOW,
stringr, mzR, reshape2, fastcluster, ggplot2, DBI, RSQLite,
uuid, jsonlite
BSgenome, easyRNASeq, edgeR, GenomicAlignments,
GenomicFeatures, GenomeInfoDb, ggbio, ggplot2, IRanges,
parallel, plyr, Rsamtools, R.utils, stats,
SummarizedExperiment, S4Vectors, utils
mclust, ctc, survival, cluster, dendextend, amap, graphics,
grDevices
data.table, dplyr, HiCcompare, edgeR, BiocParallel, qqman,
pheatmap, methods, metap, GenomicRanges, graphics, stats,
utils, pbapply, GenomeInfoDbData, BLMA, GenomeInfoDb
stats, XML, RCurl, purrr (>= 0.2.2), tibble (>= 1.2), methods,
BiocGenerics, AnnotationDbi, dplyr,
methods, parallel, doParallel, foreach, grDevices, graphics,
utils, SummarizedExperiment, stats
BiocParallel, blme, ComplexHeatmap, data.table, DESeq2,
doParallel, dplyr, edgeR, ggplot2, glmmTMB, grDevices, grid,
limma, lmerTest, lme4, magrittr, Matrix, matrixStats, methods,
parallel, progress, purrr, reshape2, scales, sctransform,
stats, SingleCellExperiment, SummarizedExperiment, S4Vectors,
tibble, variancePartition, viridis
httr, jsonlite, S4Vectors, Hmisc, plyr, magrittr, GenomeInfoDb
XML, plyr, parallel, doParallel, foreach, iterators,
ProtGenerics
Biobase, BiocGenerics (>= 0.13.6), ProtGenerics (>= 1.17.3),
ncdf4
hash(>= 2.2.6), openxlsx(>= 4.0.17), rentrez(>= 1.1.0), stats,
grDevices, graphics, stringr, knitr, testthat, utils,
AnnotationDbi, httr, org.Hs.eg.db, rtracklayer
entropy, SummarizedExperiment, SingleCellExperiment, Matrix,
cluster, data.table, stats, methods, DelayedArray, HDF5Array
Rcpp (>= 0.11.0), minet, GENIE3, c3net, PCIT, GeneNet, tools,
pracma, Matrix, corpcor, fdrtool
Rcpp, RcppParallel, parallel, grDevices, graphics, stats,
utils, dynamicTreeCut, WGCNA, impute, colorspace, methods,
R.utils
glasso, mvtnorm, parcor, GeneNet, huge, CompQuadForm, ggm,
mclust, parallel, GSA, limma, multtest, ICSNP, glmnet, network,
ggplot2, grDevices, graphics, stats, utils
stats, Matrix, dplyr, doParallel, foreach, parallel,
sparseMVN, ggplot2, gridExtra, pROC
Biostrings, checkmate, dplyr (>= 0.8.0), FactoMineR, ggdendro,
grDevices, grid, kableExtra, lubridate, methods, pander,
parallel, plotly, readr, reshape2, rmarkdown, Rsamtools,
scales, ShortRead, stats, stringr, tidyr, tidyselect (>=
0.2.3), truncnorm, utils, viridisLite, XVector, zoo
limma, mvtnorm, utils, methods, arm, HTqPCR (>= 1.16.0)
methods, stats, utils, grDevices, parallel, GenomeInfoDb,
GenomicRanges, IRanges, Rcpp (>= 0.11), qvalue (>= 2.2),
bamsignals (>= 1.4), rtracklayer (>= 1.32)
Biobase, BiocGenerics, Biostrings, GenomeInfoDb,
GenomicRanges, IRanges, Rsamtools, S4Vectors, ShortRead, dplyr,
ggplot2, magrittr, parallel, stats, utils
stats, IRanges, S4Vectors, graphics, methods
BiocGenerics (>= 0.27.1), Biobase (>= 2.17.8), methods,
graphics, IRanges (>= 2.5.17), GenomicRanges (>= 1.23.7),
SummarizedExperiment, Biostrings (>= 2.23.6), affyio (>=
1.23.2), ff, foreach, BiocManager, utils, S4Vectors (>=
0.9.25), RSQLite, DBI
stats, utils, grDevices, graphics, methods, rexposome, limma,
sva, ggplot2, ggrepel, PMA, omicade4, gridExtra, MultiDataSet,
SmartSVA, isva, parallel, SummarizedExperiment, stringr
compositions, DT, grDevices, knitr, jsonlite, matrixStats,
rmarkdown, shiny, stats, vegan, zCompositions
methods, matrixStats, graphics, stats, SummarizedExperiment,
MultiAssayExperiment, RaggedExperiment
ggplot2, ggrepel, RColorBrewer, mclust, stats,
SummarizedExperiment
Rtsne, plotly, gplots, grDevices, graphics, stats, utils,
methods, flowCore
Biobase, S4Vectors, methods, AnnotationDbi, stats, utils,
shiny, graph, Rgraphviz, ontologyPlot, dplyr, magrittr
methods,Biobase,BiocGenerics,gtools,flowCore(>=
1.31.17),flowViz,ncdfFlow(>= 2.11.34),flowWorkspace(>=
3.33.1),flowStats(>= 3.29.1),flowClust(>=
3.11.4),MASS,clue,plyr,RBGL,graph,data.table,ks,RColorBrewer,lattice,rrcov,R.utils
fastICA, tsne, scatterplot3d, pixmap, fdrtool, ape, biomaRt,
Biobase, RcppParallel, Rcpp
limma, stats, reshape, ggplot2, grDevices, RColorBrewer,
pheatmap, knitr, methods, devtools
shiny (>= 0.9.1), scales, dplyr, DT (>= 0.1.40), graphics,
utils, ggplot2
Biobase, mclust (>= 4.3), caret, e1071, sampling, class,
kernlab, lattice, nnet, randomForest, proxy, FNN, hexbin,
BiocGenerics, stats, dendextend, RColorBrewer, scales, MASS,
knitr, mvtnorm, LaplacesDemon, coda, mixtools, gtools, plyr,
ggplot2, biomaRt, utils, grDevices, graphics
matrixStats, igraph, ggplot2, grid, reshape, plyr, RUnit,
hexbin
GenomicRanges, Rsamtools, IRanges, S4Vectors, GenomeInfoDb,
grDevices
EMT, mclust, Matching, data.table, stats, grDevices, graphics,
utils
KEGGgraph, XML, Rgraphviz, graph, png, AnnotationDbi,
KEGGREST, methods, utils
lars, methods, parallel, stats, survival, utils
utils, httr, igraph, plyr, rjson, R.utils, jsonlite, readr
DESeq2, SummarizedExperiment, GenomicRanges, IRanges,
S4Vectors, genefilter, ggplot2 (>= 2.0.0), d3heatmap, scales,
NMF, plyr, topGO, limma, GOstats, GO.db, AnnotationDbi, shiny
(>= 0.12.0), shinydashboard, shinyBS, ggrepel, DT, shinyAce,
threejs, biomaRt, pheatmap, knitr, rmarkdown, base64enc, tidyr,
grDevices, methods
dplyr, ggplot2, tidyr, assertthat, lme4, splines, igraph,
foreach, parallel, doParallel, diffusr, lazyeval, tibble, grid,
utils, graphics, scales, magrittr, formula.tools, rlang
ggplot2, protolite, Biobase, GEOquery, Rook, htmltools,
httpuv, jsonlite, limma, opencpu, assertthat, methods, httr,
rhdf5, utils, parallel, stringr, fgsea (>= 1.9.4), svglite,
gtable, stats, Matrix, Matrix.utils, pheatmap, scales, ccaPP,
grid, grDevices, AnnotationDbi
SingleCellExperiment, RColorBrewer, igraph, transport, pracma,
cluster, Rtsne, destiny, Seurat, RANN, ggplot2, maptree,
pheatmap, scatterplot3d, VGAM, methods, grDevices, graphics,
stats, utils, cowplot, S4Vectors, BiocGenerics,
SummarizedExperiment, Biobase
Rcpp (>= 0.12.8), SummarizedExperiment, methods, stats, dplyr,
tibble, ggplot2, tidyr
BiocGenerics, Biobase, gplots, igraph, relations, marray,
fgsea, shiny, DT, htmlwidgets, shinyjs, shinydashboard,
visNetwork, scales, grDevices, graphics, stats, utils, methods
BSgenome, digest, visNetwork, magrittr, methods, Biostrings,
GenomeInfoDb, parallel, stats, utils
Streamer, IRanges, reshape2, plyr, RColorBrewer,ggplot2,
Biobase
methods, dplyr, rlang (>= 0.2.0), magrittr, tidyselect (>=
1.0.0), rtracklayer, GenomicAlignments, GenomeInfoDb,
Rsamtools, S4Vectors (>= 0.23.10), utils
Rcpp (>= 0.11.1), parallel, stats, graphics, grDevices, utils,
Biobase, BiocGenerics, Matrix, GenomeInfoDb, IRanges,
Biostrings, BSgenome (>= 1.32.0)
methods, S4Vectors, utils, shiny, ontoProc, ggplot2, graphics
Biostrings (>= 2.32.0), IRanges, S4Vectors, logspline, limma,
zlibbioc
cubature, doParallel, evmix, foreach, magrittr, methods,
parallel, purrr, stats, tcR, truncdist, vegan, VGAM
Rcpp (>= 0.12.3), GenomicRanges, IRanges, S4Vectors, methods
methods, BiocParallel, tools, utils, data.table (>= 1.11.8),
GenomicAlignments (>= 1.16.0), rtracklayer (>= 1.40.6),
BiocGenerics (>= 0.26.0), GenomeInfoDb (>= 1.16.0),
GenomicRanges (>= 1.32.0), IRanges (>= 2.14.12), Rsamtools (>=
1.32.3), S4Vectors (>= 0.18.3)
Biobase, corrplot, dplyr, data.table, ggfortify, ggplot2,
grDevices, lazyeval, lubridate, magrittr, pheatmap,
preprocessCore, purrr, pvca, RColorBrewer, reshape2, rlang,
scales, stats, sva, tidyr, tibble, tools, utils, viridis,
wesanderson, WGCNA
stats, utils, methods, BiocGenerics, SummarizedExperiment,
S4Vectors, extraDistr
stats, graphics, utils, grDevices, methods, pracma, Biobase,
minpack.lm, BiocParallel, missForest, ropls
methods, stats, graphics, S4Vectors, Biostrings, utils
GenomicRanges, stats, soGGi, methods, utils, S4Vectors,
R.utils, dplyr, magrittr, tidyr, IRanges, rjson,
ChIPseeker,GenomicFeatures,TxDb.Hsapiens.UCSC.hg19.knownGene,TxDb.Hsapiens.UCSC.hg38.knownGene,TxDb.Mmusculus.UCSC.mm10.knownGene,
TxDb.Mmusculus.UCSC.mm9.knownGene,org.Hs.eg.db,org.Mm.eg.db,rGREAT,
pheatmap, EnrichedHeatmap, ComplexHeatmap, grid, circlize,
BiocParallel, rtracklayer, GenomeInfoDb
methods, cluster, stats, limma, CoGAPS, NMF, ROCR
rTANDEM, plyr, seqinr, Nozzle.R1, ggplot2, reshape2, parallel,
rpx, tidyr, dplyr, plotly, rmarkdown,
AnnotationDbi, AnnotationHub, BiocFileCache, cluster,
colourpicker, data.table, digest, dplyr, DT (>= 0.2), edgeR,
fastICA, fastmatch, ggplot2, ggrepel, graphics, grDevices,
highcharter (>= 0.5.0), htmltools, httr, jsonlite, limma,
miscTools, pairsD3, plyr, Rcpp (>= 0.12.14), recount, R.utils,
reshape2, shinyjs, stringr, stats, SummarizedExperiment,
survival, tools, utils, XML, xtable, methods, org.Hs.eg.db
stringr, RCurl, igraph, ggplot2, reshape2, grid, parallel,
biomaRt, BgeeDB, topGO, BiocManager, Biobase, labeling, GO.db
robustbase, methods, R.utils, taRifx, S4Vectors,
SummarizedExperiment, ggplot2, ggridges, stats, utils, UpSetR,
cowplot, grid, MuMIn
data.table, rBiopaxParser, igraph, STRINGdb, graphics, gplots,
Biobase, BiocGenerics, AnnotationDbi, biomaRt, AnnotationHub,
GenomicRanges, graph, grDevices, stats, utils
doParallel, abind, truncnorm, CpGassoc, shiny, ggplot2,
parallel, shinyWidgets, BiocManager, doSNOW, limma, genefilter,
stats, grDevices, methods, utils, graphics, pwrEWAS.data
tidyr, preprocessCore, limma, ggplot2, RColorBrewer, stats,
utils, Biostrings, GenomicRanges, IRanges, graphics,
BiocGenerics, stringr, purrr, tibble, ggdendro, grDevices,
dplyr, magrittr, assertthat
magrittr, ggplot2, dplyr, seqTools, zlibbioc, data.table,
reshape2, grDevices, graphics, stats, utils, Rcpp, rlang,
RSeqAn
Biostrings, graphics, gtools, methods, stats, utils, HMMcopy,
rtracklayer, BSgenome, GenomicRanges, Rsamtools, IRanges,
limma, GenomeInfoDb, BiocGenerics, grDevices, zoo, BiocParallel
SummarizedExperiment, utils, sva, stats, methods, graphics
plyr,DNAcopy,lattice,ggplot2,grid,shiny (>= 0.11.1),
limma,affy,mclust,TxDb.Hsapiens.UCSC.hg18.knownGene,
TxDb.Hsapiens.UCSC.hg19.knownGene,TxDb.Hsapiens.UCSC.hg38.knownGene,
org.Hs.eg.db,GenomicFeatures,GenomeInfoDb,GenomicRanges,AnnotationDbi,
parallel,IRanges,grDevices,aCGH
Biostrings, GenomicRanges, methods, graphics, seqLogo
rjson, GetoptLong (>= 0.0.9), RCurl, utils, stats
methods, stats, igraph, stringr, grDevices, Biobase,
S4Vectors, SummarizedExperiment, BiocGenerics
graphics, stats, utils, digest, glmnet, KernSmooth, grDevices,
GenomicAlignments, Rsamtools, parallel, biomaRt, Biostrings,
BiocGenerics
stringr, gplots, ggplot2, methods, stats, utils, shiny
assertive.base (>= 0.0-7), assertive.files (>= 0.0-2),
assertive.numbers (>= 0.0-2), assertive.properties (>= 0.0-4),
assertive.sets (>= 0.0-3), assertive.types (>= 0.0-3), Biobase
(>= 2.34.0), data.table (>= 1.10.4), dplyr (>= 0.5.0), magrittr
(>= 1.5), openxlsx (>= 4.0.17), pathological (>= 0.1-2),
reshape2 (>= 1.4.2), stats, stringi (>= 1.1.5),
SummarizedExperiment (>= 1.4.0), testthat (>= 1.0.2), tidyr (>=
0.6.2), utils
BiocParallel, derfinder, downloader, GEOquery, GenomeInfoDb,
GenomicRanges, IRanges, methods, RCurl, rentrez, rtracklayer
(>= 1.35.3), S4Vectors, stats, utils
BiocGenerics, biomaRt, circlize, graphics, grDevices, methods,
rtracklayer, plyr, stats, utils
BiocStyle (>= 2.5.19), derfinder (>= 1.1.0), DEFormats,
DESeq2, GenomeInfoDb, GenomicRanges, knitcitations (>= 1.0.1),
knitr (>= 1.6), knitrBootstrap (>= 0.9.0), methods, RefManageR,
rmarkdown (>= 0.9.5), S4Vectors, SummarizedExperiment
memoise, GenomicRanges, IRanges, BSgenome, Biostrings,
rtracklayer, parallel, graphics, stats, utils, methods,
GenomeInfoDb, S4Vectors, tools
glmnet, SummarizedExperiment, S4Vectors, limma, edgeR, stats,
pbapply, utils, methods
utils, stats, methods, S4Vectors, Biobase,reshape2,
AnnotationDbi, DBI, GO.db, rhdf5client, dplyr (>= 0.7.1),
magrittr, bigrquery, ExperimentHub, AnnotationHub, rlang
methods, utils, stats, lsr, FactoMineR, stringr, circlize,
corrplot, ggplot2, reshape2, pryr, S4Vectors, imputeLCMD,
scatterplot3d, glmnet, gridExtra, grid, Hmisc, gplots, gtools,
scales, lme4, grDevices, graphics, ggrepel, mice
gplots, biomaRt, org.Hs.eg.db, GO.db, SummarizedExperiment,
hash, AnnotationDbi
Rsamtools, IRanges, baySeq, GenomeInfoDb, seqLogo
methods, BiocGenerics, S4Vectors, IRanges, GenomicRanges,
SummarizedExperiment, GenomicAlignments (>= 0.99.4),
rtracklayer, GenomeInfoDb
httr, progress, jsonlite, utils, Biobase, BiocGenerics (>=
0.23.1)
graphics, grDevices, methods, MultiDataSet, stats
shinyBS, ggplot2, reshape2, MASS, RColorBrewer,
gridExtra,visNetwork, gplots, umap, htmlwidgets, S4Vectors,
BiocGenerics, grDevices, stats, utils, graphics, shinyjs
SingleCellExperiment, SummarizedExperiment, Seurat, MASS,
zinbwave, stats, copula, ggplot2, DESeq2, utils, grid, methods
fields, mclust, BiocParallel, outliers, ggplot2, EBSeq, arm,
SingleCellExperiment, SummarizedExperiment, grDevices,
graphics, stats, S4Vectors, scran
igraph, Matrix, matrixStats, BiocParallel, BiocNeighbors,
SummarizedExperiment, SingleCellExperiment, scran, scater,
data.table, dplyr, ggplot2, randomForest, graphics, methods,
stats, DelayedArray
glmnet (> 2.0), caret (>= 6.0), ggplot2 (>= 2.2.1),
fastcluster, dplyr, Rcpp, RcppArmadillo, RcppParallel,
grDevices, graphics, stats, utils, DESeq, locfit
BiocParallel, BiocSingular, cluster, DelayedArray,
DelayedMatrixStats, distr, igraph, M3Drop (>= 1.9.4), parallel,
pdist, proxy, Rcpp (>= 0.12.18), RcppEigen (>= 0.3.3.4.0), ruv,
S4Vectors (>= 0.23.19), SingleCellExperiment (>= 1.7.3),
SummarizedExperiment
stats, methods, assertthat, tibble, dplyr, purrr, stringr,
Rdpack, BiocParallel, elasticnet, cluster, kernlab, origami
Rhtslib, biomaRt, GGally, MASS, mclust, Rcpp (>= 0.11.3),
reshape, BiocGenerics, robustbase, scales, utils, stats,
S4Vectors, SummarizedExperiment, AnnotationDbi, org.Hs.eg.db,
org.Mm.eg.db, stringr, rtracklayer, hashmap, dplyr,
GenomicRanges, magrittr, glue
stats, utils, methods, graphics, doParallel, foreach,
parallel, penalized, kernlab, rsvd, Matrix (>= 1.2-14), MASS
(>= 7.3-45), pscl (>= 1.4.9), bbmle (>= 1.0.18), gamlss (>=
4.4-0), preseqR (>= 4.0.0), SAVER (>= 1.1.1), Rmagic (>=
1.3.0), BiocParallel (>= 1.12.0)
GSEABase, Biobase, SingleCellExperiment, BiocStyle, plotly,
tagcloud, rmarkdown, Rcpp, grDevices, graphics, utils, knitr,
S4Vectors, SummarizedExperiment, RColorBrewer, nnTensor,
methods, scales, msigdbr
methods, RSQLite, igraph, S4Vectors, plotly, reactome.db,
AnnotationDbi, SummarizedExperiment, SingleCellExperiment,
nnTensor, rTensor, abind, plotrix, heatmaply, tagcloud,
rmarkdown, BiocStyle, knitr, AnnotationHub, MeSHDbi, grDevices,
graphics, stats, utils, outliers, Category, meshr, GOstats,
ReactomePA, DOSE, crayon, checkmate, BiocManager, visNetwork
BiocGenerics, SummarizedExperiment, Matrix, ggbeeswarm, grid,
DelayedArray, DelayedMatrixStats, methods, S4Vectors, stats,
utils, viridis, Rcpp, BiocNeighbors, BiocSingular, BiocParallel
Rcpp (>= 0.10.4), RcppArmadillo (>= 0.5.400.2.0), mgcv, Rook,
rjson, MASS, Cairo, RColorBrewer, edgeR, quantreg, methods,
nnet, RMTstat, extRemes, pcaMethods, BiocParallel, parallel
Matrix, S4Vectors, SingleCellExperiment, SummarizedExperiment,
xgboost, methods, stats, dplyr, pROC
SingleCellExperiment, SummarizedExperiment, methods, stats,
bit, dplyr, hash, reshape2, Rcpp(>= 0.12.12)
hexbin, stats, methods, cluster, dplyr, entropy
Biobase, SingleCellExperiment, SummarizedExperiment,
BiocGenerics, S4Vectors, dplyr, reshape2, matrixStats, proxy,
utils, googleVis, ggplot2, methods, stats, e1071, randomForest,
Rcpp (>= 0.12.12)
knitr, rmarkdown, bsseq, AnnotationHub, GenomicRanges,
reshape2, stats, utils, BSgenome, DelayedArray (>= 0.5.15),
annotatr, SummarizedExperiment (>= 1.5.6), GenomeInfoDb,
Biostrings, DT, HDF5Array (>= 1.7.5)
graphics, stats, utils, aroma.light, BiocParallel, class,
cluster, compositions, diptest, edgeR, fpc, gplots, grDevices,
hexbin, limma, matrixStats, mixtools, RColorBrewer, boot,
rhdf5, RUVSeq, rARPACK
Biostrings, methods, snpStats, VariantAnnotation,
GenomicRanges, BiocParallel, graphics, SummarizedExperiment
SummarizedExperiment, S4Vectors, BiocGenerics, BiocParallel,
Rcpp, stats, methods, utils, Matrix, scater, edgeR, limma,
BiocNeighbors, igraph, statmod, DelayedArray,
DelayedMatrixStats, BiocSingular, dqrng
data.table, GenomicAlignments, GenomicFeatures, GenomicRanges,
Rsamtools, ShortRead, parallel, plyr, BiocGenerics,
BiocParallel, S4Vectors, AnnotationDbi, Biostrings, methods,
ggplot2, ggthemes, scales, GenomeInfoDb, stringdist, ggbio,
rtracklayer, SingleCellExperiment, SummarizedExperiment
Rsamtools, IRanges, GenomeInfoDb, graphics, grDevices, utils,
abind
dplyr (>= 0.5.0), GenomeInfoDb (>= 1.13.4), ggplot2 (>=
2.2.1), grid (>= 3.5.0), IRanges (>= 2.8.2), methods,
rtracklayer, rlang, scales (>= 0.4.1), S4Vectors (>= 0.12.2),
stats, SummarizedExperiment (>= 1.4.0), tidyr (>= 0.6.1), utils
Biostrings, cowplot, dplyr, ggplot2, grid, igraph, magrittr,
methods, rvcheck, utils
methods, IRanges, BSgenome, digest, rtracklayer,
GenomicRanges, Biostrings, shiny (>= 0.13.0), DBI, RSQLite,
plotrix, fields, grid, kohonen, parallel, GenomeInfoDb, class,
S4Vectors, ggplot2, reshape2, gridExtra, jsonlite, DT (>=
0.1.0), RColorBrewer, Rsamtools, GenomicAlignments, BiocManager
data.table, eulerr, GenomeInfoDb, GenomicAlignments,
GenomicRanges, grDevices, grid, IRanges, limma, methods,
parallel, pbapply, png, RColorBrewer, Rsamtools, rtracklayer,
S4Vectors, stats
BiocParallel, R6, grDevices, utils, illuminaio, MASS,
GenomicRanges, IRanges, grid, preprocessCore, stats, S4Vectors,
randomForest, wheatmap, ggplot2, parallel, matrixStats, DNAcopy
httr, jsonlite, yaml, objectProperties, stringr, S4Vectors,
docopt, curl, uuid, dplyr
biocViews, nlme, e1071, openxlsx, pheatmap, RColorBrewer,
Matrix, SparseM, graphics, stats, utils, SummarizedExperiment,
BiocParallel, methods
corpcor (>= 1.6.2), graphics, igraph, limma, marray, MASS,
penalized, quadprog, snowfall, stats
stats4, grDevices, graphics, stats, scrime (>= 1.2.5)
ExperimentHub, utils, affy, limma, Biobase, magrittr, dplyr,
R.utils, stats, signatureSearch, rhdf5
AnnotationDbi, ggplot2, data.table, ExperimentHub, HDF5Array,
magrittr, RSQLite, dplyr, fgsea, scales, methods, qvalue,
stats, utils, reshape2, visNetwork, BiocParallel, fastmatch,
Matrix, clusterProfiler, readr, DOSE, rhdf5, GSEABase,
DelayedArray
BiocGenerics, Biostrings, class, graphics, grDevices,
GenomeInfoDb, GenomicRanges, IRanges, nloptr, methods, stats,
utils, PMCMR
graph, igraph, RBGL, graphics, utils, stats, methods
graphics, stats, gbm, Hmisc, GenomicRanges, methods
Rcpp (>= 0.11.2), entropy, scatterplot3d, MASS, TSP, ggplot2,
reshape2, fields, proxy, parallel, Rtsne, fastICA, cluster,
statmod
ape, colourpicker, cluster, ComplexHeatmap, data.table,
DESeq2, DT, ggplot2, ggtree, gridExtra, GSVA (>= 1.26.0),
GSVAdata, limma, MAST, matrixStats, methods, multtest, plotly,
RColorBrewer, Rtsne, S4Vectors, shiny, shinyjs, shinyBS, sva,
reshape2, AnnotationDbi, shinyalert, circlize, enrichR, celda,
shinycssloaders, shinythemes, umap
methods, stats, graphics, ggplot2, grDevices, ggrepel, plotly,
tidyr, plyr, magrittr, reshape, edgeR, RColorBrewer, Biobase,
BiocParallel, SummarizedExperiment, matrixStats, reshape2,
S4Vectors
ape, seqinr, Rcpp, methods, graphics, utils, stats
minfi, S4Vectors (>= 0.19.1), RColorBrewer
Rcpp (>= 0.12.8), RcppArmadillo, BH, ggplot2, grid, GSEABase,
methods, rsvd, SingleCellExperiment, SummarizedExperiment,
stats
ape, graphics, grDevices, igraph, matrixStats, methods,
SingleCellExperiment, SummarizedExperiment
SummarizedExperiment, curl, dplyr, foreach, httr, stats,
utils, methods, readr, rhdf5, jsonlite, tidyr
methods, reshape2, ggplot2, S4Vectors, IRanges, GenomeInfoDb,
GenomicRanges, Biostrings, Rsamtools, GenomicAlignments,
rtracklayer, preprocessCore, chipseq, BiocParallel
stats, utils, optparse, MASS, tmvtnorm (>= 1.4.10), MCMCpack
methods, glmnet, parcor, huge, stats, graphics, utils
akima, BiocGenerics, BiocParallel, checkmate (>= 2.0.0),
edgeR, fitdistrplus, ggplot2, locfit, matrixStats, methods,
scales, scater (>= 1.13.27), stats, SummarizedExperiment,
utils, crayon, S4Vectors, rlang
Rcpp (>= 0.12.8), methods, devtools, S4Vectors, GenomeInfoDb,
rtracklayer, SummarizedExperiment, IRanges, GenomicRanges,
DESeq2, Rsamtools, GenomicFeatures, GenomicAlignments,
grDevices, Gviz, BiocParallel, BiocManager, BiocStyle
dplyr, magrittr, GenomeInfoDb, GenomicAlignments,
GenomicRanges, IRanges, Rsamtools, S4Vectors, grid,
BiocGenerics, ggplot2, reshape2, stats, gridExtra,
TxDb.Hsapiens.UCSC.hg38.knownGene, methods, stringr
data.table, dplyr, tidyr, ggplot2, magrittr, qvalue (>= 1.99),
digest, Biobase
ape, MASS, grDevices, graphics, stats, utils
ipred, SuppDists, KernSmooth, survivalROC, bootstrap, grid,
rmeta, stats, graphics
matrixStats, stats, graphics, utils, limma,
SummarizedExperiment, dplyr, ggplot2, methods, stats
RColorBrewer, lattice, qvalue, multtest, utils, tools,
Biobase, knitr, Biostrings, cleaver (>= 1.3.3), readr (>= 0.2),
rmarkdown (>= 1.0)
doBy, dplyr, grid, magrittr, RColorBrewer, RankProd, reshape2
BiocGenerics, GenomicRanges, GenomicFeatures (>= 1.31.3),
SummarizedExperiment, VariantAnnotation (>= 1.25.11), rjson,
ggplot2, grid, limma, edgeR, DESeq2, GOstats, GO.db, annotate,
pheatmap, batchtools, yaml
stringr, S4Vectors, methods, assertive, BiocGenerics, IRanges,
XVector, Biostrings, Modstrings, ggplot2, scales
Biostrings, BiocGenerics, stringr, xml2, S4Vectors, assertive,
methods, httr, IRanges, utils
methods, assertive, stringr, BiocGenerics, Biostrings,
Structstrings, S4Vectors, IRanges, XVector, GenomeInfoDb,
rtracklayer, BSgenome, Rsamtools
BiocGenerics, GenomicRanges, IRanges, matrixStats, methods,
stats, graphics, shiny
methods, ontoProc (>= 0.99.7), SummarizedExperiment,
AnnotationDbi, matrixStats, org.Mm.eg.db, stats, utils
methods, AnnotationDbi, gplots, graphics, grDevices, stats,
utils, annotate, DBI, RSQLite
Rcpp (>= 0.11.2), ALS, ChemometricsWithR, signal, KernSmooth,
graphics, grDevices, stats
methods, utils, stats, assertthat, ggplot2
grDevices, stats, tools, utils, Biobase, Matrix (>= 1.2.10),
MSnbase (>= 2.3.10), ggplot2 (>= 2.2.1), mzR (>= 2.11.4)
GenomeInfoDb, GenomicAlignments, GenomicFeatures, Gviz,
Rsamtools, S4Vectors, rtracklayer, BiocGenerics, scales, tools,
IRanges, AnnotationDbi, grImport, htmlwidgets, plotrix,
Rgraphviz, InteractionSet, graph, utils
mgcv, edgeR, SingleCellExperiment, SummarizedExperiment,
slingshot, magrittr, RColorBrewer, clusterExperiment,
BiocParallel, pbapply, ggplot2, princurve, methods, S4Vectors
BiocGenerics, caret, chipseq, e1071, GenomicAlignments,
GenomicRanges, GenomicFeatures, GenomeInfoDb, ggplot2,
graphics, grDevices, IRanges (>= 2.11.15), pROC, reshape2,
Rsamtools, rtracklayer, S4Vectors, stats, utils
biomaRt, data.table, doSNOW, foreach, ggplot2, graphics,
grDevices, igraph, limma, parallel, progress, RedeR, snow,
stats, tidyr, topGO
BiocGenerics (>= 0.26.0), Biostrings (>= 2.48.0), dplyr (>=
0.7.6), GenomicRanges (>= 1.32.6), ggplot2 (>= 3.0.0),
ggseqlogo (>= 0.1), gridExtra (>= 2.3), methods, parallel, Rcpp
(>= 0.12.18), scales (>= 1.0.0), stats, TFMPvalue (>= 0.0.8),
utils
ape, dplyr, jsonlite, magrittr, methods, rlang, tibble,
tidytree (>= 0.2.6), utils
RSQLite, RMySQL, lassopv, randomForest, flare, vbsr, xgboost,
BiocParallel, RPostgreSQL, methods, DBI, BSgenome,
BSgenome.Hsapiens.UCSC.hg38, BSgenome.Hsapiens.UCSC.hg19,
BSgenome.Mmusculus.UCSC.mm10, SNPlocs.Hsapiens.dbSNP150.GRCh38,
org.Hs.eg.db, Biostrings, GenomicRanges, biomaRt, AnnotationDbi
grDevices, graphics, methods, stats, survival, utils,
siggenes, LogicReg (>= 1.6.1)
class, ggplot2, hexbin, methods, scales, shiny, stats, utils,
RColorBrewer, S4Vectors
SummarizedExperiment, tximport, jsonlite, S4Vectors,
GenomicRanges, AnnotationDbi, GenomicFeatures, ensembldb,
Biostrings, BiocFileCache, tibble, GenomeInfoDb, rappdirs,
utils, methods
igraph, Matrix, RANN, RSpectra, VGAM, gplots, parallel, plyr,
methods, cluster, Biobase, fpc, BiocGenerics, monocle,
grDevices, graphics, stats, utils
methods, stats, utils, MASS, ggplot2, ape, ggtree, ggseqlogo,
yaml, Rcpp, Rdpack (>= 0.7), Biostrings, BiocGenerics,
processx, S4Vectors, rlang
MASS, pbkrtest (>= 0.4-4), lmerTest, iterators, splines,
colorRamps, BiocParallel, gplots, progress, reshape2, lme4 (>=
1.1-10), doParallel, grDevices, graphics, utils, stats
Biobase, DESeq2, edgeR, GGally, ggplot2, ggrepel, knitr,
RColorBrewer, rmarkdown, scales, stats, SummarizedExperiment,
tidyr, utils
wordcloud, csaw, gplots, stats, utils, caTools, graphics,
DESeq, Biobase
Rcpp (>= 1.0.1), arm (>= 1.10-1), BiocFileCache, BiocParallel,
SingleCellExperiment, parallel, methods, stats
methods, BiocGenerics, S4Vectors (>= 0.17.25), IRanges (>=
2.13.12), Biostrings (>= 2.47.6), foreach, GenomicFeatures (>=
1.31.3), ggplot2, Hmisc, mclust, rtracklayer (>= 1.39.7),
seqinr, stringr, wmtsa
multtest, qvalue, stats, utils, BiocManager
dplyr, ggplot2 (>= 2.2.0), GenomicRanges, rtracklayer,
cowplot, assertthat, purrr, S4Vectors, IRanges, GenomeInfoDb
mzR (>= 2.19.5), BiocGenerics, ProtGenerics (>= 1.17.2),
lattice, RColorBrewer, plyr, RANN, multtest, MassSpecWavelet
(>= 1.5.2), S4Vectors, robustbase, IRanges
IRanges, stats, S4Vectors, EBImage, Matrix, mzR, data.table,
grDevices, limma
biomaRt, downloader, edgeR, gplots, graphics, limma,
matrixStats, preprocessCore, readr, RColorBrewer, stats,
quantro
GenomicFiles (>= 1.13.6), VariantAnnotation (>= 1.23.1),
gQTLBase, SummarizedExperiment, GenomicRanges, dsQTL,
GenomeInfoDb
checkmate, dplyr, ggplot2, tidyr, SummarizedExperiment
BiocParallel, softImpute, stats, genefilter, edgeR, Matrix
GenomicRanges, GenomicFeatures, GenomicAlignments, DESeq,
ggrepel, SummarizedExperiment, Rsubread, stats, ggplot2,
methods, rtracklayer, ensembldb, VariantAnnotation, dplyr,
tidyr, repmis
BiocParallel, ggplot2, grDevices, gridExtra, methods, mvtnorm,
PepsNMR, plyr, quadprog, ropls, stats, SummarizedExperiment,
utils, Matrix, zoo
stats, utils, methods, futile.logger, jsonlite, httr, curl,
rapiclient (>= 0.1.3), tibble, BiocManager
RColorBrewer, mzR, assertthat, scales, entropy, cluster,
grDevices, graphics, stats, utils
Biobase, BiocGenerics, coda, cowplot, ggExtra, ggplot2,
graphics, grDevices, KernSmooth, MASS, methods, Rcpp (>=
0.11.3), S4Vectors, scran, stats, stats4, SummarizedExperiment,
viridis, utils, Matrix, matrixStats, assertthat, reshape2,
hexbin
GenomicRanges, parallel, IRanges, stats, Rsamtools,
GenomicAlignments, DESeq2, SummarizedExperiment, utils, methods
methods, utils, stats, matrixStats, BiocGenerics, S4Vectors,
IRanges, XVector, GenomeInfoDb, GenomicRanges, Biostrings,
Rsamtools, rtracklayer
AnnotationDbi, AnnotationFilter, biomaRt, BiocGenerics,
Biostrings, BSgenome, dplyr, ensembldb, GenomeInfoDb,
GenomicFeatures, GenomicRanges, ggplot2, IRanges, magrittr,
Matrix, methods, plyranges, Rcpp, S4Vectors, stats, stringr,
tibble, tidyr, utils, zeallot
utils, rmarkdown, knitr, pander, gplots, MCMCpack, shiny, sva,
corpcor, moments, matrixStats, ggvis, heatmaply, reshape2,
limma, grDevices, graphics, stats, methods, Matrix
GenomicFeatures, rhdf5, tximport, Biostrings, rtracklayer,
biomaRt, jsonlite, methods, grDevices, graphics, stats, utils
data.table, curl, RCurl, digest, methods, stats, utils, dplyr,
RSQLite, graph, Biobase
igraph, cluster, psych, stringr, GenomicRanges, Hmisc, MASS
httr, whisker, readr, dplyr, utils, methods
ComplexHeatmap, S4Vectors, bigrquery, shiny, stats, httr,
rjson, dplyr, magrittr, grid, DT, GenomicRanges, IRanges,
ggplot2, SummarizedExperiment, DBI, GenomicFeatures,
curatedTCGAData, scales, ggpubr, plyr, car, graph, Rgraphviz
bookdown, knitr (>= 1.30), rmarkdown (>= 1.2), stats, utils,
yaml, BiocManager
methods, utils, grDevices, graphics, stats, crayon
doParallel, readr, viper, AnnotationDbi, Category, ggplot2,
UniProt.ws, lpSolve, igraph
circlize, ComplexHeatmap, ConsensusClusterPlus, cowplot,
data.table, dplyr, drc, flowCore, FlowSOM, ggplot2, ggrepel,
ggridges, graphics, grDevices, grid, gridExtra, magrittr,
Matrix, matrixStats, methods, nnls, purrr, RColorBrewer,
reshape2, Rtsne, SummarizedExperiment, S4Vectors, scales,
scater, stats
methods, scales, dplyr, data.table (>= 1.9.4), WGCNA, grid,
ggplot2, ggpmisc, ggthemes, ggrepel, sna, clusterProfiler,
fgsea, stringr, knitr, rmarkdown, igraph, DT, htmltools,
pracma, intergraph, grDevices, utils, network, matrixStats,
ggdendro, gridExtra, gtable, fastcluster
parallel, data.table, seqinr, S4Vectors (>= 0.9.25), IRanges,
BSgenome, BiocParallel, hash, methods
GenomicAlignments, GenomicFeatures, Rsamtools, ggplot2,
grDevices, stats, utils
circlize, ComplexHeatmap, clusterProfiler, DESeq2,
GenomicTools, GenomicTools.fileHandler, ggnetwork, GGally,
ggplot2, ggpubr, ggrepel, graphics, grid, igraph, Matrix,
network, Rcpp, RCy3, S4Vectors, stats, SummarizedExperiment,
utils, WebGestaltR
BiocFileCache, BiocParallel, dplyr, rlang, glue, memoise,
purrr (>= 0.3.0), rappdirs, tidyr, tidyselect, lubridate
BiocNeighbors, ggplot2, scater, viridis, cowplot,
SummarizedExperiment, SingleCellExperiment, tidyr, magrittr,
dplyr, ggridges, stats, purrr, methods, BiocParallel,
BiocGenerics
prettydoc,Hmisc,globaltest,sva,illuminaio,rmarkdown,IlluminaHumanMethylation450kmanifest,IlluminaHumanMethylationEPICanno.ilm10b4.hg19,
limma,RPMM, DNAcopy, preprocessCore,impute, marray, wateRmelon,
plyr,goseq,missMethyl,kpmt,ggplot2,
GenomicRanges,qvalue,isva,doParallel,bumphunter,quadprog,shiny,shinythemes,plotly
(>= 4.5.6),RColorBrewer,dendextend, matrixStats,combinat
ChIC.data (>= 1.7.1), caTools, methods,GenomicRanges, IRanges,
parallel, progress, caret, grDevices, stats, utils, graphics,
S4Vectors, BiocGenerics
BiocGenerics (>= 0.1.0), GO.db, biomaRt, BSgenome,
GenomicFeatures, GenomeInfoDb, grid, matrixStats,
AnnotationDbi, limma, multtest, RBGL, graph, BiocManager,
stats, regioneR, DBI, ensembldb, Biobase, seqinr, idr,
GenomicAlignments, DelayedArray, SummarizedExperiment,
rtracklayer, Rsamtools, VennDiagram
SingleCellExperiment (>= 1.8.0), SummarizedExperiment (>=
1.16.0), Matrix, mixtools, cowplot, ggplot2, gridExtra, grid,
dbscan, SNFtool, propr, uwot, Rtsne, S4Vectors (>= 0.24.0),
igraph, scales, scran (>= 1.14.6), graphics, methods, stats,
utils, reshape2, ggridges, randomForest, pheatmap, ggraph,
grDevices, rhdf5, rlang
Biobase, S4Vectors, SummarizedExperiment, piano, BiocParallel,
methods, stats, utils, graphics, grDevices, lsa