export(estDiversity, evol.rate.mcmc, evol.vcv, evolvcv.lite, exhaustiveMP, expm, export.as.xml, extract.clade.simmap)
export(gammatest, getCladesofSize, getDescendants, getExtant, getExtinct, getSisters, getStates)
export(make.era.map, make.simmap, map.overlap, matchNodes, mergeMappedStates, minSplit, mrp.supertree, multiC, multi.mantel)
export(phylANOVA, phyloDesign, phylomorphospace, phylomorphospace3d, phylosig, plotBranchbyTrait, plot.contMap, plot.densityMap)

export(add.color.bar, add.everywhere, add.random, add.simmap.legend, allFurcTrees, anc.Bayes, anc.ML, anc.trend, ancThresh)

export(ratebystate, read.newick, read.simmap, reorderSimmap, repPhylo, reroot, rerootingMethod, rescaleSimmap, rotateNodes)

export(backbone.toPhylo, bmPlot, bind.tip, branching.diffusion,brownie.lite, brownieREML)
export(densityMap, describe.simmap, drop.clade, drop.leaves, drop.tip.simmap)
export(gammatest, genSeq, getCladesofSize, getDescendants, getExtant, getExtinct, getSisters, getStates)
export(make.era.map, make.simmap, map.overlap, map.to.singleton, matchNodes, mergeMappedStates, minRotate, minSplit, mrp.supertree)
export(phylo.toBackbone,phylo.to.map, phylANOVA, phyloDesign, phylomorphospace, phylomorphospace3d, phylosig, plotBranchbyTrait)
export(plot.contMap, plot.densityMap, plot.phylo.to.map, plotSimmap, plotThresh, plotTree, plotTree.singletons, posterior.evolrate)
export(ratebystate, read.newick, read.simmap, reorder.backbonePhylo, reorderSimmap, repPhylo, reroot, rerootingMethod)
importFrom(animation, ani.options, ani.record, ani.replay, saveVideo)
importFrom(ape, .PlotPhyloEnv, .uncompressTipLabel, ace, all.equal.phylo, as.DNAbin, bind.tree, branching.times, collapse.singles)
importFrom(ape, compute.brlen, cophenetic.phylo, di2multi, dist.dna, dist.nodes, drop.tip, extract.clade, is.binary.tree, is.rooted)
importFrom(ape, is.ultrametric, matexpo, mrca, multi2di, neworder_phylo, neworder_pruningwise, nodelabels, pic, plot.phylo, prop.part)
importFrom(ape, read.tree, reorder.phylo, root, rotate, rtree, stree, tiplabels, unroot, vcv, vcv.phylo, write.tree)
#importFrom(extrafont, embed_fonts, font_import, fonts, loadfonts)
importFrom(phangorn, allTrees, Ancestors, as.phyDat, dist.hamming, NJ, nni, optim.parsimony, parsimony, phyDat, pratchet)
importFrom(rgl, lines3d, play3d, plot3d, r3dDefaults, segments3d, spheres3d, spin3d, text3d)