exportPattern("^[[:alpha:]]+")
import(dplR)
importFrom("grDevices", "dev.off", "jpeg", "pdf", "rainbow")
importFrom("graphics", "abline", "axis", "legend", "lines", "mtext","par", "plot", "points", "text")
importFrom("stats", "deviance", "lm", "nls", "predict", "sd")
importFrom("utils", "write.csv")

exportPattern("^[[:alpha:]]+")
import(dplR)
importFrom("grDevices", "dev.off", "jpeg", "pdf", "rainbow")
importFrom("graphics", "abline", "axis", "legend", "lines", "mtext","par", "plot", "points", "text")
importFrom("stats", "deviance", "lm", "nls", "predict", "sd")
importFrom("utils", "write.csv")

## This file is part of the TRAMP package
## Need a few filename bits from package:tools
## Export the methods to make it easier:
## Currently ignoring must.contain.cols, read.string, strstrip and

export(find.maf, find.t, gcount, ll, prev, rtrios, strata.cnt, tdt)
import(Rlab)
importFrom("stats", "anova", "glm", "pchisq", "poisson")

importFrom("stats", "fitted", "mad", "median", "sd", "ts.plot")

import(topGO, GO.db, RColorBrewer, lattice, gplots, methods, gtools)

importFrom("graphics", "abline", "axis", "barplot", "box", "hist",
"image", "layout", "lines", "mtext", "par", "plot",
importFrom("stats", "as.dendrogram", "density", "dhyper", "dist",

importFrom("stats", "cor", "lsfit", "pchisq", "pnorm", "qchisq", "sd")

importFrom("stats", "as.formula", "coef", "median", "na.omit",
importFrom("utils", "capture.output", "flush.console", "str", "globalVariables")

useDynLib(TSHRC, .registration = TRUE, .fixes = "C_")
export(twostage)

useDynLib(TSHRC, .registration = TRUE, .fixes = "C_")
export(twostage)

export(TSMNmoments,TSMNgenerator)
importFrom("stats", "dnorm", "dt", "integrate", "pnorm", "pt", "qnorm", "qt", "rbeta", "runif")

import(RMySQL) ## this should not all be needed, but parts for setClass "TSMySQLConnection"

import("RMySQL") ## this should not all be needed, but parts for setClass "TSMySQLConnection"
## many function from TSdbi need to be visible to the user, so it is indicated
## using Depends: in NAMESPACE rather than importing and exporting here.