plotEst, plotKinSpecEst, fillResult, getResid, getResidRet,
getTraces, getdim1List, getdim2List, getResiduals, getXList,

getTraces, getdim1, getdim2, getX, getCLP, getResiduals, getXList,

### Import ordinary functions from other packages

importFrom(ape, rtree, multi2di, di2multi, is.binary.tree, is.rooted, unroot)

importFrom("graphics", abline, legend, matplot, plot)
importFrom("stats", approx, confint, integrate, nlminb,
optim, optimHess, pchisq, qchisq, qnorm, rnorm,
importClassesFrom("Matrix")# all currently (FIXME) , corMatrix, dgCMatrix, dgTMatrix, dpoMatrix)
importMethodsFrom("Matrix", coerce, cov2cor, determinant, drop,
t, diag, chol2inv, solve, colSums,rowSums)

importFrom("stats", approx, confint, integrate, median, nlminb,

export(ROC, roctable, scaling, TOC, uncertainty)

importFrom("graphics", "axis", "legend", "par", "plot", "points")

importFrom("graphics", "axis", "legend", "par", "points")

importFrom("stats", "cov", "dist", "nlminb", "pchisq", "pnorm")

export(plot.TPidm, print.TPidm, summary.TPidm, TPidm, test.nm)

exportPattern(tpam.cv, tpam.plotcv, tpam.predict, tpam.project, tpam.train)

export(transAJ, transPAJ, transKMW, transKMPW, transIPCW, transLIN, transLS)

importFrom("graphics", contour, image, layout, legend, lines, par, plot, plot.new, title)

importFrom("graphics", axis, box, contour, image, layout, lcm, legend, lines, par, plot, plot.new, plot.window, rect, title)

importFrom("utils", "data", "download.file", "read.csv", "read.delim")

exportPattern("^[[:alpha:]]+")
import(dplR)
importFrom("grDevices", "dev.off", "jpeg", "pdf", "rainbow")
importFrom("graphics", "abline", "axis", "legend", "lines", "mtext","par", "plot", "points", "text")
importFrom("stats", "deviance", "lm", "nls", "predict", "sd")
importFrom("utils", "write.table")

exportPattern("^[[:alpha:]]+")
import(dplR)
importFrom("grDevices", "dev.off", "jpeg", "pdf", "rainbow")
importFrom("graphics", "abline", "axis", "legend", "lines", "mtext","par", "plot", "points", "text")
importFrom("stats", "deviance", "lm", "nls", "predict", "sd")
importFrom("utils", "write.table")