Dependency analysis on package basilisk

General information

Bioconductor link link
Package version1.8.0
Number of strong dependencies22
Number of all dependencies68
Number of parent packages6
Max heaviness from parent packages15
Total heaviness from parent packages18
Number of parent packages (including Suggests and Enhances)11
Max co-heaviness from parent packages ("basilisk.utils" and "dir.expiry")2

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of basilisk and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on basilisk.

Adjust heatmap size:
Base packages Other packages Imports Suggests utils methods tools stats grDevices graphics grid jsonlite rappdirs filelock withr rprojroot dir.expiry Matrix Rcpp RcppTOML here png lattice R6 evaluate glue magrittr highr stringr yaml xfun stringi rlang digest processx ps bslib htmltools jquerylib knitr tinytex sass base64enc fastmap fs bookdown rmarkdown BiocManager brio callr cli crayon desc ellipsis lifecycle pkgload praise waldo rstudioapi diffobj fansi rematch2 tibble pillar pkgconfig vctrs utf8 0 2 4 Imported methods 0 10 20 30 Required packages 0 10 20 Heaviness from parents utils methods parallel dir.expiry basilisk.utils reticulate callr knitr rmarkdown BiocStyle testthat In total 22 packages are required directly or indirectly (68) when installing 'basilisk' (1.8.0) Imports Suggests Base packages that are required Recommended packages that are required Contributed packages that are required Packages that are required for installing 'basilisk' Imported functions


Dependency table

"Import" information is from the NAMESPACE file of basilisk.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on basilisk: number of required packages that can be reduced if moving parent package to Suggests of basilisk.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on basilisk
reticulate Imports 4 0 0 16 15
basilisk.utils Imports 1 0 0 5 2
parallel Imports 4 0 0 0 1
utils Imports 1 0 0 0 0
methods Imports 1 0 0 0 0
dir.expiry Imports 3 0 0 2 0
testthat Suggests No object is imported into the namespace of basilisk. 36 28
BiocStyle Suggests No object is imported into the namespace of basilisk. 30 24
rmarkdown Suggests No object is imported into the namespace of basilisk. 27 21
knitr Suggests No object is imported into the namespace of basilisk. 12 9
callr Suggests No object is imported into the namespace of basilisk. 4 4

Analysis was done with pkgndep.