Dependency analysis on package bssm

General information

CRAN link link
Package version2.0.1
Number of strong dependencies60
Number of all dependencies127
Number of parent packages12
Max heaviness from parent packages7
Total heaviness from parent packages13
Number of parent packages (including Suggests and Enhances)20
Max co-heaviness from parent packages ("posterior" and "diagis")17

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of bssm and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on bssm.

Adjust heatmap size:
Base packages Other packages Imports LinkingTo Suggests utils methods stats grDevices graphics grid splines parallel tools stats4 tcltk glue R6 magrittr rlang crayon tibble lifecycle ellipsis fansi pillar pkgconfig vctrs cli utf8 digest withr lattice Rcpp gtable isoband MASS mgcv scales nlme Matrix farver labeling munsell RColorBrewer viridisLite colorspace generics ggplot2 backports tidyselect purrr RcppArmadillo dplyr cpp11 coda gridExtra abind checkmate tensorA distributional matrixStats numDeriv yaml evaluate jsonlite highr stringr xfun stringi rex httr lazyeval curl mime openssl askpass sys bslib htmltools jquerylib knitr tinytex sass base64enc fastmap fs rappdirs brio callr desc pkgload praise processx ps waldo rprojroot rstudioapi diffobj rematch2 fda zoo fds deSolve rainbow RCurl pcaPP hdrcde cluster ks bitops mvtnorm locfit ash KernSmooth FNN kernlab mclust multicool plot3D pracma misc3d 0 2 4 6 Imported methods 0 20 40 60 Required packages 0 10 20 Heaviness from parents magrittr rlang checkmate Rcpp coda dplyr tidyr diagis posterior sitmo RcppArmadillo ramcmc KFAS MASS knitr covr rmarkdown testthat ggplot2 sde In total 60 packages are required directly or indirectly (127) when installing 'bssm' (2.0.1) Imports LinkingTo Suggests Base packages that are required Recommended packages that are required Contributed packages that are required Packages that are required for installing 'bssm' Imported functions Package is listed in 'Imports' but namespace is not imported


Dependency table

"Import" information is from the NAMESPACE file of bssm.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on bssm: number of required packages that can be reduced if moving parent package to Suggests of bssm.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on bssm
posterior Imports 5 0 0 47 7
tidyr Imports 1 0 0 22 2
diagis Imports 5 0 0 42 2
magrittr Imports 1 0 0 0 0
rlang Imports 2 0 0 1 0
checkmate Imports 7 0 0 2 0
Rcpp Imports 1 0 0 2 0
coda Imports 1 0 0 6 0
dplyr Imports 4 0 0 20 0
sitmo LinkingTo Parent package is listed in LinkingTo of bssm but no object from parent package is imported. 3 1
ramcmc LinkingTo Parent package is listed in LinkingTo of bssm but no object from parent package is imported. 5 1
RcppArmadillo LinkingTo Parent package is listed in LinkingTo of bssm but no object from parent package is imported. 4 0
sde Suggests No object is imported into the namespace of bssm. 63 25
rmarkdown Suggests No object is imported into the namespace of bssm. 27 19
testthat Suggests No object is imported into the namespace of bssm. 36 16
covr Suggests No object is imported into the namespace of bssm. 20 12
knitr Suggests No object is imported into the namespace of bssm. 12 8
KFAS Suggests No object is imported into the namespace of bssm. 1 1
MASS Suggests No object is imported into the namespace of bssm. 5 0
ggplot2 Suggests No object is imported into the namespace of bssm. 37 0

The following table lists pairs of parent packages with co-heaviness larger than 10. The co-heaviness measures the number of additional dependencies that two parent packages simultaneously import and are only imported by the two parents.

Note the co-heaviness from parents can be always easily observed in the dependency heatmap.

Parent 1 Parent 2 Co-heaviness on bssm Co-heaviness as Jaccard coeffcient
diagis posterior 17 0.654

Analysis was done with pkgndep.