Dependency analysis on package cytolib

General information

Bioconductor link link
Package version2.8.0
Number of strong dependencies9
Number of all dependencies34
Number of parent packages6
Max heaviness from parent packages2
Total heaviness from parent packages6
Number of parent packages (including Suggests and Enhances)8
Max co-heaviness from parent packages ("RcppArmadillo" and "Rcpp")3

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of cytolib and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on cytolib.

Adjust heatmap size:
Base packages Other packages Imports LinkingTo Suggests methods utils stats tools grDevices Rcpp evaluate highr stringr yaml xfun glue magrittr stringi bslib htmltools jquerylib jsonlite knitr tinytex sass rlang digest base64enc fastmap fs R6 rappdirs 0 0.5 1 Imported methods 0 10 20 Required packages 0 10 20 Heaviness from parents RcppParallel RProtoBufLib BH Rhdf5lib Rcpp RcppArmadillo knitr rmarkdown In total 9 packages are required directly or indirectly (34) when installing 'cytolib' (2.8.0) Imports LinkingTo Suggests Base packages that are required Contributed packages that are required Packages that are required for installing 'cytolib' Imported functions Package is listed in 'Imports' but namespace is not imported


Dependency table

"Import" information is from the NAMESPACE file of cytolib.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on cytolib: number of required packages that can be reduced if moving parent package to Suggests of cytolib.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on cytolib
RcppParallel Imports 1 0 0 0 1
RProtoBufLib Imports 1 0 0 0 1
RcppArmadillo LinkingTo Parent package is listed in LinkingTo of cytolib but no object from parent package is imported. 4 2
BH LinkingTo Parent package is listed in LinkingTo of cytolib but no object from parent package is imported. 0 1
Rhdf5lib LinkingTo Parent package is listed in LinkingTo of cytolib but no object from parent package is imported. 0 1
Rcpp LinkingTo Parent package is listed in LinkingTo of cytolib but no object from parent package is imported. 2 0
rmarkdown Suggests No object is imported into the namespace of cytolib. 27 25
knitr Suggests No object is imported into the namespace of cytolib. 12 10

Analysis was done with pkgndep.