Dependency analysis on package EnsDb.Hsapiens.v86

General information

Bioconductor link link
Package version2.99.0
Number of strong dependencies101
Number of all dependencies101
Number of parent packages1
Max heaviness from parent packages101
Total heaviness from parent packages101
Number of parent packages (including Suggests and Enhances)1

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of EnsDb.Hsapiens.v86 and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on EnsDb.Hsapiens.v86.

Adjust heatmap size:
Base packages Other packages Depends methods utils graphics stats stats4 tools grDevices parallel grid BiocGenerics GenomicRanges GenomicFeatures AnnotationFilter RSQLite DBI Biobase GenomeInfoDb AnnotationDbi rtracklayer S4Vectors Rsamtools IRanges ProtGenerics Biostrings curl XVector RCurl BiocIO biomaRt lazyeval bit64 blob memoise pkgconfig Rcpp plogr GenomeInfoDbData KEGGREST XML zlibbioc GenomicAlignments restfulr bitops BiocParallel Rhtslib crayon progress stringr httr digest BiocFileCache rappdirs xml2 bit rlang vctrs cachem png SummarizedExperiment rjson yaml futile.logger snow codetools BH hms prettyunits R6 glue magrittr stringi jsonlite mime openssl dbplyr dplyr filelock cli fastmap MatrixGenerics Matrix DelayedArray lambda.r futile.options ellipsis lifecycle askpass assertthat pillar purrr tibble tidyselect withr generics matrixStats lattice formatR sys fansi utf8 0 0.5 1 Imported methods 0 50 100 Required packages 0 50 100 Heaviness from parents ensembldb In total 101 packages are required directly or indirectly (101) when installing 'EnsDb.Hsapiens.v86' (2.99.0) Depends Base packages that are required Recommended packages that are required Contributed packages that are required Packages that are required for installing 'EnsDb.Hsapiens.v86' The whole namespace is imported


Dependency table

"Import" information is from the NAMESPACE file of EnsDb.Hsapiens.v86.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on EnsDb.Hsapiens.v86: number of required packages that can be reduced if moving parent package to Suggests of EnsDb.Hsapiens.v86.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on EnsDb.Hsapiens.v86
ensembldb Depends The whole set of functions/methods/classes from parent package is imported to the namespace of EnsDb.Hsapiens.v86. 100 101

Analysis was done with pkgndep.