Dependency analysis on package faahKO

General information

Bioconductor link link
Package version1.36.0
Number of strong dependencies94
Number of all dependencies94
Number of parent packages1
Max heaviness from parent packages94
Total heaviness from parent packages94
Number of parent packages (including Suggests and Enhances)1

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of faahKO and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on faahKO.

Adjust heatmap size:
Base packages Other packages Depends methods stats utils parallel grid stats4 graphics grDevices tools splines BiocParallel MSnbase mzR Biobase BiocGenerics ProtGenerics lattice RColorBrewer plyr RANN MassSpecWavelet S4Vectors robustbase IRanges SummarizedExperiment MsCoreUtils MsFeatures futile.logger snow codetools BH vsn affy impute pcaMethods MALDIquant mzID digest ggplot2 XML scales MASS Rcpp ncdf4 Rhdf5lib DEoptimR MatrixGenerics GenomicRanges Matrix GenomeInfoDb DelayedArray clue lambda.r futile.options limma affyio BiocManager preprocessCore zlibbioc doParallel foreach iterators glue gtable isoband mgcv rlang tibble withr farver labeling lifecycle munsell R6 viridisLite matrixStats XVector RCurl GenomeInfoDbData cluster formatR nlme ellipsis fansi magrittr pillar pkgconfig vctrs colorspace bitops cli crayon utf8 0 0.5 1 Imported methods 0 20 40 60 80 Required packages 0 20 40 60 80 Heaviness from parents xcms In total 94 packages are required directly or indirectly (94) when installing 'faahKO' (1.36.0) Depends Base packages that are required Recommended packages that are required Contributed packages that are required Packages that are required for installing 'faahKO' Package is listed in 'Imports' but namespace is not imported


Dependency table

"Import" information is from the NAMESPACE file of faahKO.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on faahKO: number of required packages that can be reduced if moving parent package to Suggests of faahKO.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on faahKO
xcms Depends Parent package is listed in Depends of faahKO but no object from parent package is imported. 93 94

Analysis was done with pkgndep.