Dependency analysis on package gdsfmt

General information

Bioconductor link link
Package version1.32.0
Number of strong dependencies1
Number of all dependencies38
Number of parent packages1
Max heaviness from parent packages1
Total heaviness from parent packages1
Number of parent packages (including Suggests and Enhances)10

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of gdsfmt and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on gdsfmt.

Adjust heatmap size:
Base packages Other packages Depends Suggests utils methods stats grDevices graphics tools grid xfun evaluate highr stringr yaml glue magrittr stringi mime lattice bslib htmltools jquerylib jsonlite knitr tinytex sass rlang digest base64enc fastmap fs R6 rappdirs 0 0.5 1 Imported methods 0 10 20 Required packages 0 10 20 Heaviness from parents methods parallel digest crayon RUnit BiocGenerics markdown Matrix knitr rmarkdown In total 1 packages are required directly or indirectly (38) when installing 'gdsfmt' (1.32.0) Depends Suggests Base packages that are required Recommended packages that are required Contributed packages that are required Packages that are required for installing 'gdsfmt' The whole namespace is imported


Dependency table

"Import" information is from the NAMESPACE file of gdsfmt.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on gdsfmt: number of required packages that can be reduced if moving parent package to Suggests of gdsfmt.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on gdsfmt
methods Depends The whole set of functions/methods/classes from parent package is imported to the namespace of gdsfmt. 0 1
rmarkdown Suggests No object is imported into the namespace of gdsfmt. 27 27
knitr Suggests No object is imported into the namespace of gdsfmt. 12 12
Matrix Suggests No object is imported into the namespace of gdsfmt. 7 7
markdown Suggests No object is imported into the namespace of gdsfmt. 5 6
BiocGenerics Suggests No object is imported into the namespace of gdsfmt. 4 4
crayon Suggests No object is imported into the namespace of gdsfmt. 3 3
RUnit Suggests No object is imported into the namespace of gdsfmt. 3 3
digest Suggests No object is imported into the namespace of gdsfmt. 1 2
parallel Suggests No object is imported into the namespace of gdsfmt. 0 1

Analysis was done with pkgndep.