Dependency analysis on package h5vcData

General information

Bioconductor link link
Package version2.16.0
Number of strong dependencies0
Number of all dependencies90
Number of parent packages0
Max heaviness from parent packages0
Total heaviness from parent packages0
Number of parent packages (including Suggests and Enhances)1

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of h5vcData and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on h5vcData.

Adjust heatmap size:
Base packages Other packages Suggests grid methods grDevices graphics utils stats stats4 parallel splines tools gridExtra ggplot2 rhdf5 reshape S4Vectors IRanges Biostrings Rsamtools GenomicRanges abind BiocParallel BatchJobs h5vcData GenomeInfoDb Rhtslib gtable digest glue isoband MASS mgcv rlang scales tibble withr Rhdf5lib rhdf5filters plyr BiocGenerics XVector crayon zlibbioc bitops futile.logger snow codetools BH BBmisc backports brew checkmate data.table DBI RSQLite sendmailR stringi RCurl GenomeInfoDbData nlme Matrix farver labeling lifecycle munsell R6 RColorBrewer viridisLite ellipsis fansi magrittr pillar pkgconfig vctrs Rcpp lambda.r futile.options bit64 blob memoise plogr base64enc lattice colorspace cli utf8 formatR bit cachem fastmap 0 0.5 1 Imported methods 0 20 40 60 80 Required packages 0 20 40 60 80 Heaviness from parents h5vc In total 0 packages are required directly or indirectly (90) when installing 'h5vcData' (2.16.0) Suggests Base packages that are required Recommended packages that are required Contributed packages that are required Packages that are required for installing 'h5vcData'


Dependency table

"Import" information is from the NAMESPACE file of h5vcData.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on h5vcData: number of required packages that can be reduced if moving parent package to Suggests of h5vcData.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on h5vcData
h5vc Suggests No object is imported into the namespace of h5vcData. 89 90

Analysis was done with pkgndep.