Dependency analysis on package hapmapsnp5

General information

Bioconductor link link
Package version1.38.0
Number of strong dependencies0
Number of all dependencies53
Number of parent packages0
Max heaviness from parent packages0
Total heaviness from parent packages0
Number of parent packages (including Suggests and Enhances)1

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of hapmapsnp5 and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on hapmapsnp5.

Adjust heatmap size:
Base packages Other packages Suggests graphics methods splines stats stats4 utils grDevices tools grid BiocGenerics oligoClasses Biobase Biostrings affyio affxparser DBI ff preprocessCore RSQLite zlibbioc IRanges GenomicRanges SummarizedExperiment foreach BiocManager S4Vectors XVector GenomeInfoDb crayon bit bit64 blob memoise pkgconfig Rcpp plogr MatrixGenerics Matrix DelayedArray codetools iterators RCurl GenomeInfoDbData rlang vctrs cachem matrixStats lattice bitops cli glue fastmap 0 0.5 1 Imported methods 0 20 40 Required packages 0 20 40 Heaviness from parents oligo In total 0 packages are required directly or indirectly (53) when installing 'hapmapsnp5' (1.38.0) Suggests Base packages that are required Recommended packages that are required Contributed packages that are required Packages that are required for installing 'hapmapsnp5'


Dependency table

"Import" information is from the NAMESPACE file of hapmapsnp5.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on hapmapsnp5: number of required packages that can be reduced if moving parent package to Suggests of hapmapsnp5.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on hapmapsnp5
oligo Suggests No object is imported into the namespace of hapmapsnp5. 52 53

Analysis was done with pkgndep.