Dependency analysis on package hpar

General information

Bioconductor link link
Package version1.38.0
Number of strong dependencies1
Number of all dependencies88
Number of parent packages1
Max heaviness from parent packages1
Total heaviness from parent packages1
Number of parent packages (including Suggests and Enhances)7

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of hpar and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on hpar.

Adjust heatmap size:
Base packages Other packages Imports Suggests methods utils stats tools grDevices graphics stats4 glue rlang jsonlite R6 evaluate magrittr fastmap highr stringr yaml xfun stringi digest pkgconfig vctrs crayon cli knitr htmltools jquerylib tinytex bslib base64enc sass fs rappdirs AnnotationDbi BiocGenerics Biobase IRanges DBI RSQLite S4Vectors KEGGREST bit64 blob memoise Rcpp plogr httr png Biostrings bit cachem curl mime openssl XVector GenomeInfoDb askpass zlibbioc RCurl GenomeInfoDbData sys bitops bookdown rmarkdown BiocManager brio callr desc ellipsis lifecycle pkgload praise processx ps waldo withr rprojroot rstudioapi diffobj fansi rematch2 tibble pillar utf8 0 1 2 Imported methods 0 20 40 Required packages 0 20 40 Heaviness from parents utils knitr rmarkdown BiocStyle testthat org.Hs.eg.db GO.db In total 1 packages are required directly or indirectly (88) when installing 'hpar' (1.38.0) Imports Suggests Base packages that are required Contributed packages that are required Packages that are required for installing 'hpar' Imported functions


Dependency table

"Import" information is from the NAMESPACE file of hpar.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on hpar: number of required packages that can be reduced if moving parent package to Suggests of hpar.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on hpar
utils Imports 2 0 0 0 1
org.Hs.eg.db Suggests No object is imported into the namespace of hpar. 45 45
GO.db Suggests No object is imported into the namespace of hpar. 45 45
testthat Suggests No object is imported into the namespace of hpar. 36 36
BiocStyle Suggests No object is imported into the namespace of hpar. 30 30
rmarkdown Suggests No object is imported into the namespace of hpar. 27 27
knitr Suggests No object is imported into the namespace of hpar. 12 12

Analysis was done with pkgndep.