Dependency analysis on package interactiveDisplayBase

General information

Bioconductor link link
Package version1.34.0
Number of strong dependencies41
Number of all dependencies49
Number of parent packages4
Max heaviness from parent packages18
Total heaviness from parent packages24
Number of parent packages (including Suggests and Enhances)7
Max co-heaviness from parent packages ("shiny" and "DT")13

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of interactiveDisplayBase and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on interactiveDisplayBase.

Adjust heatmap size:
Base packages Other packages Depends Imports Suggests Enhances utils stats methods tools graphics grDevices magrittr jsonlite htmltools R6 later promises rlang fastmap Rcpp digest base64enc jquerylib yaml mime glue htmlwidgets crosstalk lazyeval httpuv xtable fontawesome sourcetools crayon withr commonmark bslib cachem ellipsis lifecycle sass fs rappdirs xfun evaluate highr stringr stringi 0 0.5 1 Imported methods 0 10 20 30 Required packages 0 5 10 15 Heaviness from parents methods BiocGenerics DT shiny markdown knitr rstudioapi In total 41 packages are required directly or indirectly (49) when installing 'interactiveDisplayBase' (1.34.0) Depends Imports Suggests Enhances Base packages that are required Contributed packages that are required Packages that are required for installing 'interactiveDisplayBase' The whole namespace is imported Package is listed in 'Imports' but namespace is not imported


Dependency table

"Import" information is from the NAMESPACE file of interactiveDisplayBase.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on interactiveDisplayBase: number of required packages that can be reduced if moving parent package to Suggests of interactiveDisplayBase.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on interactiveDisplayBase
BiocGenerics Depends The whole set of functions/methods/classes from parent package is imported to the namespace of interactiveDisplayBase. 4 1
methods Depends The whole set of functions/methods/classes from parent package is imported to the namespace of interactiveDisplayBase. 0 0
shiny Imports The whole set of functions/methods/classes from parent package is imported to the namespace of interactiveDisplayBase. 34 18
DT Imports Parent package is listed in Imports of interactiveDisplayBase but no object from parent package is imported. 20 5
knitr Suggests No object is imported into the namespace of interactiveDisplayBase. 12 6
markdown Suggests No object is imported into the namespace of interactiveDisplayBase. 5 2
rstudioapi Enhances No object is imported into the namespace of interactiveDisplayBase. 0 1

The following table lists pairs of parent packages with co-heaviness larger than 10. The co-heaviness measures the number of additional dependencies that two parent packages simultaneously import and are only imported by the two parents.

Note the co-heaviness from parents can be always easily observed in the dependency heatmap.

Parent 1 Parent 2 Co-heaviness on interactiveDisplayBase Co-heaviness as Jaccard coeffcient
DT shiny 13 0.361

Analysis was done with pkgndep.