Dependency analysis on package KEGGREST

General information

Bioconductor link link
Package version1.36.0
Number of strong dependencies27
Number of all dependencies38
Number of parent packages4
Max heaviness from parent packages16
Total heaviness from parent packages25
Number of parent packages (including Suggests and Enhances)8
Max co-heaviness from parent packages ("Biostrings" and "httr")1

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of KEGGREST and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on KEGGREST.

Adjust heatmap size:
Base packages Other packages Imports Suggests methods utils tools stats graphics grDevices stats4 mime curl jsonlite openssl R6 askpass sys BiocGenerics S4Vectors IRanges XVector GenomeInfoDb crayon zlibbioc RCurl GenomeInfoDbData bitops xfun evaluate highr stringr yaml glue magrittr stringi 0 2 4 Imported methods 0 5 10 15 Required packages 0 5 10 15 Heaviness from parents methods png httr Biostrings RUnit BiocGenerics markdown knitr In total 27 packages are required directly or indirectly (38) when installing 'KEGGREST' (1.36.0) Imports Suggests Base packages that are required Contributed packages that are required Packages that are required for installing 'KEGGREST' Imported functions The whole namespace is imported


Dependency table

"Import" information is from the NAMESPACE file of KEGGREST.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on KEGGREST: number of required packages that can be reduced if moving parent package to Suggests of KEGGREST.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on KEGGREST
Biostrings Imports 4 0 0 17 16
httr Imports 5 0 0 9 8
png Imports 2 0 0 0 1
methods Imports The whole set of functions/methods/classes from parent package is imported to the namespace of KEGGREST. 0 0
knitr Suggests No object is imported into the namespace of KEGGREST. 12 9
markdown Suggests No object is imported into the namespace of KEGGREST. 5 2
RUnit Suggests No object is imported into the namespace of KEGGREST. 3 1
BiocGenerics Suggests No object is imported into the namespace of KEGGREST. 4 0

Analysis was done with pkgndep.