Dependency analysis on package marray

General information

Bioconductor link link
Package version1.74.0
Number of strong dependencies6
Number of all dependencies11
Number of parent packages2
Max heaviness from parent packages5
Total heaviness from parent packages5
Number of parent packages (including Suggests and Enhances)3
Max co-heaviness from parent packages ("limma" and "methods")1

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of marray and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on marray.

Adjust heatmap size:
Base packages Other packages Depends Suggests utils methods grDevices graphics stats tools tcltk widgetTools DynDoc 0 0.5 1 Imported methods 0 2 4 6 Required packages 0 2 4 Heaviness from parents methods limma tkWidgets In total 6 packages are required directly or indirectly (11) when installing 'marray' (1.74.0) Depends Suggests Base packages that are required Contributed packages that are required Packages that are required for installing 'marray' The whole namespace is imported Package is listed in 'Imports' but namespace is not imported


Dependency table

"Import" information is from the NAMESPACE file of marray.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on marray: number of required packages that can be reduced if moving parent package to Suggests of marray.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on marray
limma Depends Parent package is listed in Depends of marray but no object from parent package is imported. 5 5
methods Depends The whole set of functions/methods/classes from parent package is imported to the namespace of marray. 0 0
tkWidgets Suggests No object is imported into the namespace of marray. 6 5

Analysis was done with pkgndep.