Dependency analysis on package metapod

General information

Bioconductor link link
Package version1.4.0
Number of strong dependencies3
Number of all dependencies57
Number of parent packages1
Max heaviness from parent packages3
Total heaviness from parent packages3
Number of parent packages (including Suggests and Enhances)5

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of metapod and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on metapod.

Adjust heatmap size:
Base packages Other packages Imports Suggests methods utils stats tools grDevices graphics evaluate magrittr glue highr stringr yaml xfun stringi digest jsonlite R6 rlang knitr htmltools jquerylib tinytex bslib base64enc fastmap sass fs rappdirs bookdown rmarkdown BiocManager brio callr cli crayon desc ellipsis lifecycle pkgload praise processx ps waldo withr rprojroot rstudioapi diffobj fansi rematch2 tibble pillar pkgconfig vctrs utf8 0 0.5 1 Imported methods 0 10 20 30 Required packages 0 10 20 30 Heaviness from parents Rcpp knitr rmarkdown BiocStyle testthat In total 3 packages are required directly or indirectly (57) when installing 'metapod' (1.4.0) Imports Suggests Base packages that are required Contributed packages that are required Packages that are required for installing 'metapod' Imported functions


Dependency table

"Import" information is from the NAMESPACE file of metapod.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on metapod: number of required packages that can be reduced if moving parent package to Suggests of metapod.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on metapod
Rcpp Imports 1 0 0 2 3
testthat Suggests No object is imported into the namespace of metapod. 36 35
BiocStyle Suggests No object is imported into the namespace of metapod. 30 29
rmarkdown Suggests No object is imported into the namespace of metapod. 27 26
knitr Suggests No object is imported into the namespace of metapod. 12 11

Analysis was done with pkgndep.