Dependency analysis on package micemd

General information

CRAN link link
Package version1.8.0
Number of strong dependencies81
Number of all dependencies107
Number of parent packages14
Max heaviness from parent packages22
Total heaviness from parent packages31
Number of parent packages (including Suggests and Enhances)15
Max co-heaviness from parent packages ("jomo" and "lme4")20

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of micemd and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on micemd.

Adjust heatmap size:
Base packages Other packages Depends Imports Suggests utils stats graphics grDevices methods grid tools splines parallel lattice Rcpp rlang withr ellipsis glue tibble lifecycle magrittr R6 vctrs pillar fansi pkgconfig digest MASS cli crayon utf8 nlme Matrix boot minqa nloptr RcppEigen testthat brio callr desc evaluate jsonlite pkgload praise processx ps waldo rprojroot rstudioapi diffobj rematch2 broom dplyr generics tidyr cpp11 backports purrr stringr ggplot2 tidyselect stringi gtable isoband mgcv scales farver labeling munsell RColorBrewer viridisLite colorspace lme4 survival numDeriv mixmeta ordinal ucminf car robustbase sp vcd nnet e1071 laeken ranger data.table carData abind pbkrtest quantreg maptools DEoptimR lmtest class proxy knitr SparseM MatrixModels foreign zoo highr yaml xfun 0 5 10 15 Imported methods 0 50 100 Required packages 0 10 20 Heaviness from parents mice graphics utils stats parallel digest mvtnorm abind MASS mvmeta nlme Matrix lme4 jomo VIM In total 81 packages are required directly or indirectly (107) when installing 'micemd' (1.8.0) Depends Imports Suggests Base packages that are required Recommended packages that are required Contributed packages that are required Packages that are required for installing 'micemd' Imported functions The whole namespace is imported


Dependency table

"Import" information is from the NAMESPACE file of micemd.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on micemd: number of required packages that can be reduced if moving parent package to Suggests of micemd.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on micemd
mice Depends The whole set of functions/methods/classes from parent package is imported to the namespace of micemd. 50 22
jomo Imports 6 0 0 54 5
mvmeta Imports 1 0 0 5 2
mvtnorm Imports 1 0 0 2 1
abind Imports 1 0 0 2 1
graphics Imports 5 0 0 0 0
utils Imports 1 0 0 0 0
stats Imports 18 0 0 0 0
parallel Imports 7 0 0 0 0
digest Imports 1 0 0 1 0
MASS Imports 1 0 0 5 0
nlme Imports 1 0 0 6 0
Matrix Imports 1 0 0 7 0
lme4 Imports 5 0 0 49 0
VIM Suggests No object is imported into the namespace of micemd. 99 26

The following table lists pairs of parent packages with co-heaviness larger than 10. The co-heaviness measures the number of additional dependencies that two parent packages simultaneously import and are only imported by the two parents.

Note the co-heaviness from parents can be always easily observed in the dependency heatmap.

Parent 1 Parent 2 Co-heaviness on micemd Co-heaviness as Jaccard coeffcient
lme4 jomo 20 0.8

Analysis was done with pkgndep.