Dependency analysis on package microRNA

General information

Bioconductor link link
Package version1.54.0
Number of strong dependencies18
Number of all dependencies18
Number of parent packages1
Max heaviness from parent packages18
Total heaviness from parent packages18
Number of parent packages (including Suggests and Enhances)1

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of microRNA and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on microRNA.

Adjust heatmap size:
Base packages Other packages Imports methods utils grDevices graphics stats stats4 tools BiocGenerics S4Vectors IRanges XVector GenomeInfoDb crayon zlibbioc RCurl GenomeInfoDbData bitops 0 1 2 3 Imported methods 0 5 10 15 Required packages 0 5 10 15 Heaviness from parents Biostrings In total 18 packages are required directly or indirectly (18) when installing 'microRNA' (1.54.0) Imports Base packages that are required Contributed packages that are required Packages that are required for installing 'microRNA' Imported functions Imported S4 methods


Dependency table

"Import" information is from the NAMESPACE file of microRNA.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on microRNA: number of required packages that can be reduced if moving parent package to Suggests of microRNA.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on microRNA
Biostrings Imports 2 1 0 17 18

Analysis was done with pkgndep.