Dependency analysis on package mzID

General information

Bioconductor link link
Package version1.34.0
Number of strong dependencies11
Number of all dependencies52
Number of parent packages8
Max heaviness from parent packages2
Total heaviness from parent packages5
Number of parent packages (including Suggests and Enhances)10
Max co-heaviness from parent packages ("doParallel" and "foreach")2

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of mzID and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on mzID.

Adjust heatmap size:
Base packages Other packages Depends Imports Suggests utils methods parallel tools stats grDevices graphics iterators codetools Rcpp foreach evaluate glue magrittr highr stringr yaml xfun stringi brio callr cli crayon desc digest ellipsis jsonlite lifecycle pkgload praise processx ps R6 rlang waldo withr rprojroot rstudioapi diffobj fansi rematch2 tibble pillar pkgconfig vctrs utf8 0 5 10 Imported methods 0 10 20 30 Required packages 0 10 20 30 Heaviness from parents methods parallel iterators ProtGenerics XML plyr foreach doParallel knitr testthat In total 11 packages are required directly or indirectly (52) when installing 'mzID' (1.34.0) Depends Imports Suggests Base packages that are required Recommended packages that are required Contributed packages that are required Packages that are required for installing 'mzID' Imported functions The whole namespace is imported


Dependency table

"Import" information is from the NAMESPACE file of mzID.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on mzID: number of required packages that can be reduced if moving parent package to Suggests of mzID.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on mzID
methods Depends The whole set of functions/methods/classes from parent package is imported to the namespace of mzID. 0 0
plyr Imports 2 0 0 3 2
ProtGenerics Imports 4 0 0 1 1
XML Imports 10 0 0 2 1
doParallel Imports 1 0 0 5 1
parallel Imports 3 0 0 0 0
iterators Imports 1 0 0 1 0
foreach Imports 2 0 0 3 0
testthat Suggests No object is imported into the namespace of mzID. 36 35
knitr Suggests No object is imported into the namespace of mzID. 12 11

Analysis was done with pkgndep.