Dependency analysis on package Rhtslib

General information

Bioconductor link link
Package version1.28.0
Number of strong dependencies1
Number of all dependencies32
Number of parent packages1
Max heaviness from parent packages1
Total heaviness from parent packages1
Number of parent packages (including Suggests and Enhances)4

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of Rhtslib and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on Rhtslib.

Adjust heatmap size:
Base packages Other packages Imports Suggests methods tools stats utils grDevices evaluate highr stringr yaml xfun glue magrittr stringi bslib htmltools jquerylib jsonlite knitr tinytex sass rlang digest base64enc fastmap fs R6 rappdirs bookdown rmarkdown BiocManager 0 0.5 1 Imported methods 0 10 20 30 Required packages 0 10 20 30 Heaviness from parents zlibbioc knitr rmarkdown BiocStyle In total 1 packages are required directly or indirectly (32) when installing 'Rhtslib' (1.28.0) Imports Suggests Base packages that are required Contributed packages that are required Packages that are required for installing 'Rhtslib' The whole namespace is imported


Dependency table

"Import" information is from the NAMESPACE file of Rhtslib.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on Rhtslib: number of required packages that can be reduced if moving parent package to Suggests of Rhtslib.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on Rhtslib
zlibbioc Imports The whole set of functions/methods/classes from parent package is imported to the namespace of Rhtslib. 0 1
BiocStyle Suggests No object is imported into the namespace of Rhtslib. 30 31
rmarkdown Suggests No object is imported into the namespace of Rhtslib. 27 28
knitr Suggests No object is imported into the namespace of Rhtslib. 12 13

Analysis was done with pkgndep.