Dependency analysis on package rmsb

General information

CRAN link link
Package version0.1.0
Number of strong dependencies98
Number of all dependencies106
Number of parent packages17
Max heaviness from parent packages11
Total heaviness from parent packages20
Number of parent packages (including Suggests and Enhances)18
Max co-heaviness from parent packages ("Hmisc" and "rms")17

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of rmsb and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on rmsb.

Adjust heatmap size:
Base packages Other packages Depends Imports LinkingTo Suggests utils stats methods graphics grDevices grid splines tools parallel stats4 lattice Matrix glue magrittr R6 cli nlme MASS digest gtable isoband mgcv rlang scales tibble withr RColorBrewer viridisLite farver labeling lifecycle munsell ellipsis fansi pillar pkgconfig vctrs backports colorspace crayon utf8 Rcpp ggplot2 stringr checkmate stringi gridExtra evaluate highr yaml xfun RcppParallel survival rpart htmlTable htmltools cluster Formula latticeExtra nnet foreign data.table viridis base64enc knitr htmlwidgets rstudioapi fastmap png jpeg jsonlite matrixStats desc rprojroot RcppEigen Hmisc SparseM quantreg polspline multcomp MatrixModels mvtnorm TH.data sandwich codetools zoo StanHeaders inline loo pkgbuild BH callr prettyunits processx ps broom dplyr generics tidyr cpp11 purrr tidyselect 0 1 2 Imported methods 0 20 40 60 80 Required packages 0 5 10 Heaviness from parents rms methods RcppParallel digest Rcpp cluster MASS loo survival rstantools knitr ggplot2 rstan Hmisc BH RcppEigen StanHeaders mice In total 98 packages are required directly or indirectly (106) when installing 'rmsb' (0.1.0) Depends Imports LinkingTo Suggests Base packages that are required Recommended packages that are required Contributed packages that are required Packages that are required for installing 'rmsb' Imported functions The whole namespace is imported Package is listed in 'Imports' but namespace is not imported


Dependency table

"Import" information is from the NAMESPACE file of rmsb.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on rmsb: number of required packages that can be reduced if moving parent package to Suggests of rmsb.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on rmsb
rms Depends The whole set of functions/methods/classes from parent package is imported to the namespace of rmsb. 78 11
rstan Imports 2 0 0 58 8
rstantools Imports Parent package is listed in Imports of rmsb but no object from parent package is imported. 10 1
methods Imports The whole set of functions/methods/classes from parent package is imported to the namespace of rmsb. 0 0
RcppParallel Imports Parent package is listed in Imports of rmsb but no object from parent package is imported. 0 0
digest Imports Parent package is listed in Imports of rmsb but no object from parent package is imported. 1 0
Rcpp Imports The whole set of functions/methods/classes from parent package is imported to the namespace of rmsb. 2 0
cluster Imports Parent package is listed in Imports of rmsb but no object from parent package is imported. 4 0
MASS Imports Parent package is listed in Imports of rmsb but no object from parent package is imported. 5 0
loo Imports Parent package is listed in Imports of rmsb but no object from parent package is imported. 6 0
survival Imports Parent package is listed in Imports of rmsb but no object from parent package is imported. 9 0
knitr Imports Parent package is listed in Imports of rmsb but no object from parent package is imported. 12 0
ggplot2 Imports The whole set of functions/methods/classes from parent package is imported to the namespace of rmsb. 37 0
Hmisc Imports The whole set of functions/methods/classes from parent package is imported to the namespace of rmsb. 67 0
BH LinkingTo Parent package is listed in LinkingTo of rmsb but no object from parent package is imported. 0 0
RcppEigen LinkingTo Parent package is listed in LinkingTo of rmsb but no object from parent package is imported. 9 0
StanHeaders LinkingTo Parent package is listed in LinkingTo of rmsb but no object from parent package is imported. 11 0
mice Suggests No object is imported into the namespace of rmsb. 50 8

The following table lists pairs of parent packages with co-heaviness larger than 10. The co-heaviness measures the number of additional dependencies that two parent packages simultaneously import and are only imported by the two parents.

Note the co-heaviness from parents can be always easily observed in the dependency heatmap.

Parent 1 Parent 2 Co-heaviness on rmsb Co-heaviness as Jaccard coeffcient
rms Hmisc 17 0.607

Analysis was done with pkgndep.