Dependency analysis on package scrime

General information

CRAN link link
Package version1.3.5
Number of strong dependencies3
Number of all dependencies50
Number of parent packages3
Max heaviness from parent packages1
Total heaviness from parent packages3
Number of parent packages (including Suggests and Enhances)7

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of scrime and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on scrime.

Adjust heatmap size:
Base packages Other packages Imports Suggests methods stats utils grDevices graphics stats4 tools grid bit64 blob DBI memoise pkgconfig Rcpp plogr bit rlang vctrs cachem cli glue fastmap BiocGenerics Biobase IRanges GenomicRanges SummarizedExperiment Biostrings affyio foreach BiocManager S4Vectors RSQLite ff GenomeInfoDb XVector MatrixGenerics Matrix DelayedArray crayon zlibbioc codetools iterators RCurl GenomeInfoDbData matrixStats lattice bitops 0 5 10 Imported methods 0 20 40 Required packages 0 20 40 Heaviness from parents methods stats utils DBI MASS RSQLite oligoClasses In total 3 packages are required directly or indirectly (50) when installing 'scrime' (1.3.5) Imports Suggests Base packages that are required Recommended packages that are required Contributed packages that are required Packages that are required for installing 'scrime' Imported functions


Dependency table

"Import" information is from the NAMESPACE file of scrime.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on scrime: number of required packages that can be reduced if moving parent package to Suggests of scrime.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on scrime
methods Imports 1 0 0 0 1
stats Imports 12 0 0 0 1
utils Imports 2 0 0 0 1
oligoClasses Suggests No object is imported into the namespace of scrime. 48 46
RSQLite Suggests No object is imported into the namespace of scrime. 17 15
MASS Suggests No object is imported into the namespace of scrime. 5 3
DBI Suggests No object is imported into the namespace of scrime. 1 1

Analysis was done with pkgndep.