Dependency analysis on package zebrafishRNASeq

General information

Bioconductor link link
Package version1.16.0
Number of strong dependencies0
Number of all dependencies31
Number of parent packages0
Max heaviness from parent packages0
Total heaviness from parent packages0
Number of parent packages (including Suggests and Enhances)2

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of zebrafishRNASeq and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on zebrafishRNASeq.

Adjust heatmap size:
Base packages Other packages Suggests stats utils methods tools grDevices yaml xfun evaluate highr stringr glue magrittr stringi bookdown knitr rmarkdown BiocManager htmltools jquerylib tinytex bslib jsonlite digest base64enc rlang fastmap sass fs R6 rappdirs 0 0.5 1 Imported methods 0 10 20 30 Required packages 0 10 20 30 Heaviness from parents knitr BiocStyle In total 0 packages are required directly or indirectly (31) when installing 'zebrafishRNASeq' (1.16.0) Suggests Base packages that are required Contributed packages that are required Packages that are required for installing 'zebrafishRNASeq'


Dependency table

"Import" information is from the NAMESPACE file of zebrafishRNASeq.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on zebrafishRNASeq: number of required packages that can be reduced if moving parent package to Suggests of zebrafishRNASeq.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on zebrafishRNASeq
BiocStyle Suggests No object is imported into the namespace of zebrafishRNASeq. 30 31
knitr Suggests No object is imported into the namespace of zebrafishRNASeq. 12 13

Analysis was done with pkgndep.