Dependency analysis on package ape

General information

CRAN link link
Package version5.6-2
Number of strong dependencies11
Number of all dependencies21
Number of parent packages9
Max heaviness from parent packages1
Total heaviness from parent packages4
Number of parent packages (including Suggests and Enhances)13
Max co-heaviness from parent packages ("nlme" and "lattice")3

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of ape and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on ape.

Adjust heatmap size:
Base packages Other packages Imports Suggests utils stats graphics grid grDevices methods parallel tools lattice Matrix magrittr pkgconfig ape fastmatch igraph quadprog Rcpp nlme 0 20 40 60 Imported methods 0 5 10 15 Required packages 0 2 4 6 8 Heaviness from parents graphics methods stats tools utils parallel Rcpp lattice nlme gee expm igraph phangorn In total 11 packages are required directly or indirectly (21) when installing 'ape' (5.6-2) Imports Suggests Base packages that are required Recommended packages that are required Contributed packages that are required Packages that are required for installing 'ape' Imported functions Package is listed in 'Imports' but namespace is not imported


Dependency table

"Import" information is from the NAMESPACE file of ape.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on ape: number of required packages that can be reduced if moving parent package to Suggests of ape.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on ape
tools Imports Parent package is listed in Imports of ape but no object from parent package is imported. 0 1
parallel Imports 1 0 0 0 1
Rcpp Imports 1 0 0 2 1
nlme Imports 8 0 0 6 1
graphics Imports 32 0 0 0 0
methods Imports 2 0 0 0 0
stats Imports 59 0 0 0 0
utils Imports 5 0 0 0 0
lattice Imports 3 0 0 5 0
phangorn Suggests No object is imported into the namespace of ape. 18 8
igraph Suggests No object is imported into the namespace of ape. 10 4
expm Suggests No object is imported into the namespace of ape. 8 2
gee Suggests No object is imported into the namespace of ape. 1 1

Analysis was done with pkgndep.