Dependency analysis on package HilbertCurve

General information

Bioconductor link link
Package version1.26.0
Number of strong dependencies27
Number of all dependencies88
Number of parent packages10
Max heaviness from parent packages8
Total heaviness from parent packages17
Number of parent packages (including Suggests and Enhances)18
Max co-heaviness from parent packages ("GenomicRanges" and "IRanges")4

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of HilbertCurve and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on HilbertCurve.

Adjust heatmap size:
Base packages Other packages Depends Imports Suggests utils methods stats grDevices graphics tools grid stats4 parallel BiocGenerics S4Vectors GlobalOptions shape colorspace IRanges bitops Rcpp lattice GenomeInfoDb XVector RCurl GenomeInfoDbData zlibbioc xfun crayon evaluate glue magrittr digest rjson highr stringr yaml stringi jsonlite R6 rlang mime bslib htmltools jquerylib knitr tinytex sass base64enc fastmap fs rappdirs circlize GetoptLong clue RColorBrewer png matrixStats foreach doParallel codetools cluster iterators brio callr cli desc ellipsis lifecycle pkgload praise processx ps waldo withr rprojroot rstudioapi diffobj fansi rematch2 tibble pillar pkgconfig vctrs utf8 0 1 2 Imported methods 0 10 20 30 Required packages 0 10 20 30 Heaviness from parents grid methods utils png grDevices polylabelr HilbertVis IRanges circlize GenomicRanges RColorBrewer RCurl markdown GetoptLong knitr rmarkdown ComplexHeatmap testthat In total 27 packages are required directly or indirectly (88) when installing 'HilbertCurve' (1.26.0) Depends Imports Suggests Base packages that are required Recommended packages that are required Contributed packages that are required Packages that are required for installing 'HilbertCurve' Imported functions The whole namespace is imported


Dependency table

"Import" information is from the NAMESPACE file of HilbertCurve.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on HilbertCurve: number of required packages that can be reduced if moving parent package to Suggests of HilbertCurve.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on HilbertCurve
grid Depends The whole set of functions/methods/classes from parent package is imported to the namespace of HilbertCurve. 0 0
GenomicRanges Imports The whole set of functions/methods/classes from parent package is imported to the namespace of HilbertCurve. 15 8
circlize Imports 2 0 0 9 4
polylabelr Imports The whole set of functions/methods/classes from parent package is imported to the namespace of HilbertCurve. 3 2
HilbertVis Imports 1 0 0 6 2
png Imports 1 0 0 0 1
methods Imports The whole set of functions/methods/classes from parent package is imported to the namespace of HilbertCurve. 0 0
utils Imports 1 0 0 0 0
grDevices Imports 2 0 0 0 0
IRanges Imports The whole set of functions/methods/classes from parent package is imported to the namespace of HilbertCurve. 7 0
testthat Suggests No object is imported into the namespace of HilbertCurve. 36 31
rmarkdown Suggests No object is imported into the namespace of HilbertCurve. 27 23
ComplexHeatmap Suggests No object is imported into the namespace of HilbertCurve. 28 14
knitr Suggests No object is imported into the namespace of HilbertCurve. 12 9
markdown Suggests No object is imported into the namespace of HilbertCurve. 5 3
GetoptLong Suggests No object is imported into the namespace of HilbertCurve. 6 3
RColorBrewer Suggests No object is imported into the namespace of HilbertCurve. 0 1
RCurl Suggests No object is imported into the namespace of HilbertCurve. 2 0

Analysis was done with pkgndep.