Dependency analysis on package rhdf5filters

General information

Bioconductor link link
Package version1.8.0
Number of strong dependencies1
Number of all dependencies59
Number of parent packages1
Max heaviness from parent packages1
Total heaviness from parent packages1
Number of parent packages (including Suggests and Enhances)6

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of rhdf5filters and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on rhdf5filters.

Adjust heatmap size:
Base packages Other packages LinkingTo Suggests methods stats utils tools grDevices graphics evaluate glue magrittr yaml xfun highr stringr stringi jsonlite digest rlang R6 knitr htmltools jquerylib tinytex bslib base64enc fastmap sass fs rappdirs Rhdf5lib rhdf5filters bookdown rmarkdown BiocManager brio callr cli crayon desc ellipsis lifecycle pkgload praise processx ps waldo withr rprojroot rstudioapi diffobj fansi rematch2 tibble pillar pkgconfig vctrs utf8 0 0.5 1 Imported methods 0 10 20 30 Required packages 0 10 20 30 Heaviness from parents Rhdf5lib rhdf5 knitr rmarkdown BiocStyle testthat In total 1 packages are required directly or indirectly (59) when installing 'rhdf5filters' (1.8.0) LinkingTo Suggests Base packages that are required Contributed packages that are required Packages that are required for installing 'rhdf5filters' Package is listed in 'Imports' but namespace is not imported


Dependency table

"Import" information is from the NAMESPACE file of rhdf5filters.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on rhdf5filters: number of required packages that can be reduced if moving parent package to Suggests of rhdf5filters.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on rhdf5filters
Rhdf5lib LinkingTo Parent package is listed in LinkingTo of rhdf5filters but no object from parent package is imported. 0 1
testthat Suggests No object is imported into the namespace of rhdf5filters. 36 37
BiocStyle Suggests No object is imported into the namespace of rhdf5filters. 30 31
rmarkdown Suggests No object is imported into the namespace of rhdf5filters. 27 28
knitr Suggests No object is imported into the namespace of rhdf5filters. 12 13
rhdf5 Suggests No object is imported into the namespace of rhdf5filters. 3 3

Analysis was done with pkgndep.