Dependency analysis on package XVector

General information

Bioconductor link link
Package version0.36.0
Number of strong dependencies10
Number of all dependencies47
Number of parent packages7
Max heaviness from parent packages1
Total heaviness from parent packages3
Number of parent packages (including Suggests and Enhances)10
Max co-heaviness from parent packages ("IRanges" and "S4Vectors")2

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of XVector and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on XVector.

Adjust heatmap size:
Base packages Other packages Depends Imports Suggests methods utils graphics stats stats4 grDevices tools BiocGenerics S4Vectors IRanges XVector GenomeInfoDb crayon zlibbioc RCurl GenomeInfoDbData bitops AnnotationDbi Biobase DBI RSQLite KEGGREST bit64 blob memoise pkgconfig Rcpp plogr httr png Biostrings bit rlang vctrs cachem curl jsonlite mime openssl R6 cli glue fastmap askpass sys 0 1 2 Imported methods 0 20 40 Required packages 0 10 20 30 Heaviness from parents methods BiocGenerics S4Vectors IRanges utils tools zlibbioc RUnit Biostrings drosophila2probe In total 10 packages are required directly or indirectly (47) when installing 'XVector' (0.36.0) Depends Imports Suggests Base packages that are required Contributed packages that are required Packages that are required for installing 'XVector' Imported functions The whole namespace is imported


Dependency table

"Import" information is from the NAMESPACE file of XVector.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on XVector: number of required packages that can be reduced if moving parent package to Suggests of XVector.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on XVector
IRanges Depends The whole set of functions/methods/classes from parent package is imported to the namespace of XVector. 7 1
methods Depends The whole set of functions/methods/classes from parent package is imported to the namespace of XVector. 0 0
BiocGenerics Depends The whole set of functions/methods/classes from parent package is imported to the namespace of XVector. 4 0
S4Vectors Depends The whole set of functions/methods/classes from parent package is imported to the namespace of XVector. 6 0
tools Imports 1 0 0 0 1
zlibbioc Imports The whole set of functions/methods/classes from parent package is imported to the namespace of XVector. 0 1
utils Imports 2 0 0 0 0
drosophila2probe Suggests No object is imported into the namespace of XVector. 45 36
Biostrings Suggests No object is imported into the namespace of XVector. 17 8
RUnit Suggests No object is imported into the namespace of XVector. 3 1

Analysis was done with pkgndep.