Dependency analysis on package bold

General information

CRAN link link
Package version1.2.0
Number of strong dependencies33
Number of all dependencies89
Number of parent packages8
Max heaviness from parent packages12
Total heaviness from parent packages25
Number of parent packages (including Suggests and Enhances)11
Max co-heaviness from parent packages ("tibble" and "stringr")2

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of bold and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on bold.

Adjust heatmap size:
Base packages Other packages Imports Suggests methods utils tools stats grDevices graphics stats4 Rcpp magrittr glue R6 jsonlite mime ellipsis lifecycle rlang crayon curl urltools httpcode triebeard fansi pillar pkgconfig vctrs cli utf8 plyr stringi base64enc rprojroot withr digest crul httr webmockr yaml cpp11 openssl fauxpas askpass whisker sys brio callr desc evaluate pkgload praise processx ps waldo rstudioapi diffobj rematch2 tibble Biostrings shiny BiocGenerics S4Vectors IRanges XVector GenomeInfoDb httpuv xtable fontawesome htmltools sourcetools later promises fastmap commonmark bslib cachem zlibbioc RCurl GenomeInfoDbData sass jquerylib bitops fs rappdirs 0 2 4 6 Imported methods 0 20 40 Required packages 0 10 20 30 Heaviness from parents xml2 jsonlite data.table plyr reshape stringr crul tibble vcr testthat sangerseqR In total 33 packages are required directly or indirectly (89) when installing 'bold' (1.2.0) Imports Suggests Base packages that are required Contributed packages that are required Packages that are required for installing 'bold' Imported functions Package is listed in 'Imports' but namespace is not imported


Dependency table

"Import" information is from the NAMESPACE file of bold.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on bold: number of required packages that can be reduced if moving parent package to Suggests of bold.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on bold
tibble Imports Parent package is listed in Imports of bold but no object from parent package is imported. 15 12
crul Imports 2 0 0 11 7
stringr Imports 3 0 0 7 3
xml2 Imports 6 0 0 1 1
data.table Imports Parent package is listed in Imports of bold but no object from parent package is imported. 1 1
reshape Imports 1 0 0 4 1
jsonlite Imports 1 0 0 1 0
plyr Imports 1 0 0 3 0
sangerseqR Suggests No object is imported into the namespace of bold. 46 32
testthat Suggests No object is imported into the namespace of bold. 36 17
vcr Suggests No object is imported into the namespace of bold. 24 12

Analysis was done with pkgndep.