Dependency analysis on package RNeXML

General information

CRAN link link
Package version2.4.7
Number of strong dependencies47
Number of all dependencies143
Number of parent packages14
Max heaviness from parent packages7
Total heaviness from parent packages20
Number of parent packages (including Suggests and Enhances)26
Max co-heaviness from parent packages ("tidyr" and "dplyr")14

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of RNeXML and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on RNeXML.

Adjust heatmap size:
Base packages Other packages Depends Imports Suggests methods utils tools stats grDevices graphics grid parallel splines magrittr glue Rcpp R6 jsonlite stringi pkgconfig curl stringr rlang crayon mime openssl askpass sys lifecycle tibble vctrs pillar ellipsis fansi cli utf8 nlme lattice generics tidyselect purrr cpp11 plyr dplyr digest yaml evaluate xml2 highr xfun httr withr knitr MASS Matrix fs commonmark ape coda maps clusterGeneration combinat expm mnormt numDeriv phangorn plotrix scatterplot3d fastmatch igraph quadprog colorspace desc pkgload rprojroot rstudioapi thor contentid storr hunspell rex lazyeval RefManageR lubridate bslib htmltools jquerylib tinytex sass base64enc fastmap rappdirs mvtnorm subplex deSolve ncbit phytools brio callr praise processx ps waldo diffobj rematch2 RJSONIO httpuv ggplot2 XML promises later gtable isoband mgcv scales farver labeling munsell RColorBrewer viridisLite redland jsonld readr tidyr roxygen2 V8 clipr hms vroom tzdb brew bit64 progress bit prettyunits 0 2 4 6 8 Imported methods 0 20 40 60 Required packages 0 10 20 Heaviness from parents methods ape uuid lazyeval xml2 rlang XML plyr stringi stringr httr reshape2 dplyr tidyr xslt knitr taxalight spelling covr knitcitations rmarkdown phytools geiger testthat rfigshare rdflib In total 47 packages are required directly or indirectly (143) when installing 'RNeXML' (2.4.7) Depends Imports Suggests Base packages that are required Recommended packages that are required Contributed packages that are required Packages that are required for installing 'RNeXML' Imported functions Imported S4 classes The whole namespace is imported Package is listed in 'Imports' but namespace is not imported


Dependency table

"Import" information is from the NAMESPACE file of RNeXML.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on RNeXML: number of required packages that can be reduced if moving parent package to Suggests of RNeXML.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on RNeXML
ape Depends The whole set of functions/methods/classes from parent package is imported to the namespace of RNeXML. 11 6
methods Depends 8 0 1 0 0
httr Imports The whole set of functions/methods/classes from parent package is imported to the namespace of RNeXML. 9 7
tidyr Imports 1 0 0 22 2
uuid Imports 1 0 0 0 1
lazyeval Imports 1 0 0 0 1
xml2 Imports 1 0 0 1 1
XML Imports The whole set of functions/methods/classes from parent package is imported to the namespace of RNeXML. 2 1
reshape2 Imports The whole set of functions/methods/classes from parent package is imported to the namespace of RNeXML. 10 1
rlang Imports Parent package is listed in Imports of RNeXML but no object from parent package is imported. 1 0
plyr Imports 2 0 0 3 0
stringi Imports 2 0 0 3 0
stringr Imports 1 0 0 7 0
dplyr Imports 9 0 0 20 0
rdflib Suggests No object is imported into the namespace of RNeXML. 58 27
geiger Suggests No object is imported into the namespace of RNeXML. 36 23
rfigshare Suggests No object is imported into the namespace of RNeXML. 53 22
rmarkdown Suggests No object is imported into the namespace of RNeXML. 27 16
phytools Suggests No object is imported into the namespace of RNeXML. 29 16
testthat Suggests No object is imported into the namespace of RNeXML. 36 16
spelling Suggests No object is imported into the namespace of RNeXML. 18 9
taxalight Suggests No object is imported into the namespace of RNeXML. 16 6
knitr Suggests No object is imported into the namespace of RNeXML. 12 5
covr Suggests No object is imported into the namespace of RNeXML. 20 5
knitcitations Suggests No object is imported into the namespace of RNeXML. 24 4
xslt Suggests No object is imported into the namespace of RNeXML. 4 1

The following table lists pairs of parent packages with co-heaviness larger than 10. The co-heaviness measures the number of additional dependencies that two parent packages simultaneously import and are only imported by the two parents.

Note the co-heaviness from parents can be always easily observed in the dependency heatmap.

Parent 1 Parent 2 Co-heaviness on RNeXML Co-heaviness as Jaccard coeffcient
dplyr tidyr 14 0.875

Analysis was done with pkgndep.