Dependency analysis on package rotl

General information

CRAN link link
Package version3.0.12
Number of strong dependencies35
Number of all dependencies98
Number of parent packages6
Max heaviness from parent packages12
Total heaviness from parent packages21
Number of parent packages (including Suggests and Enhances)13
Max co-heaviness from parent packages ("rentrez" and "httr")6

Dependency heatmap

In the following dependency heatmap, rows are the parent packages of rotl and columns are the dependency packages that each parent package brings in. On the right side of the heatmap, there are three barplot annotations: 1. number of imported functions/S4 methods/S4 classes from parent packages; 2. number of dependency packages from each parent package; 3. heaviness of each parent package on rotl.

Adjust heatmap size:
Base packages Other packages Imports Suggests methods tools utils stats grDevices graphics parallel grid R6 glue jsonlite rlang Rcpp crayon ellipsis lifecycle pkgconfig vctrs cli curl mime openssl askpass sys nlme lattice XML httr progress hms prettyunits magrittr stringr stringi tibble pillar fansi utf8 evaluate ape cpp11 highr yaml xfun digest plyr reshape2 uuid dplyr lazyeval tidyr xml2 generics tidyselect purrr Matrix coda corpcor tensorA cubature cellranger rematch bslib htmltools jquerylib knitr tinytex sass base64enc fastmap fs rappdirs brio callr desc pkgload praise processx ps waldo withr rprojroot rstudioapi diffobj rematch2 ade4 rncl RNeXML MASS pixmap sp 0 2 4 Imported methods 0 20 40 Required packages 0 10 20 Heaviness from parents assertthat jsonlite httr ape rentrez rncl knitr MCMCglmm readxl rmarkdown testthat RNeXML phylobase In total 35 packages are required directly or indirectly (98) when installing 'rotl' (3.0.12) Imports Suggests Base packages that are required Recommended packages that are required Contributed packages that are required Packages that are required for installing 'rotl' Imported functions The whole namespace is imported


Dependency table

"Import" information is from the NAMESPACE file of rotl.

imports: number of imported functions/objects; importMethods: number of imported S4 methods; importClasses: number of imported S4 classes.

Required packages: number of strong dependency packages for each of the parent package (or in other words, number of dependency packages the parent package brings in).

Heaviness from parent on rotl: number of required packages that can be reduced if moving parent package to Suggests of rotl.

Parent package Field imports importMethods importClasses Required packages Heaviness from parent on rotl
rncl Imports 1 0 0 17 12
ape Imports The whole set of functions/methods/classes from parent package is imported to the namespace of rotl. 11 6
rentrez Imports 2 0 0 12 2
assertthat Imports 3 0 0 1 1
jsonlite Imports 3 0 0 1 0
httr Imports 4 0 0 9 0
phylobase Suggests No object is imported into the namespace of rotl. 56 24
testthat Suggests No object is imported into the namespace of rotl. 36 21
rmarkdown Suggests No object is imported into the namespace of rotl. 27 19
RNeXML Suggests No object is imported into the namespace of rotl. 47 19
readxl Suggests No object is imported into the namespace of rotl. 23 9
knitr Suggests No object is imported into the namespace of rotl. 12 8
MCMCglmm Suggests No object is imported into the namespace of rotl. 17 6

Analysis was done with pkgndep.